The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G53850 AT1G53850 AT3G14290 |
| fragaria_vesca | FvH4_3g12370 |
| malus_domestica | MD05G1251400.v1.1 MD10G1231900.v1.1 |
| prunus_persica | Prupe.4G112400_v2.0.a1 Prupe.4G112400_v2.0.a1 |
| pyrus_communis | pycom10g19520 |
| rosa_chinensis | RchiOBHm_Chr5g0020181 |
| rosa_laevigata | RLG00000032507 |
| rosa_multiflora | Rmu_sc0000116.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00058020 |
| rosa_rugosa | Rorug05G0057500 |
| rosa_samantha | Rh5AG147900 Rh5BG147500 Rh5CG158900 Rh5DG146600 |
| rosa_wichuraiana | Rw5G013080 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 32 |
| AccI | GTMKAC | 1 cut(s) | 639 |
| AccII | CGCG | 2 cut(s) | 254, 256 |
| AclWI | GGATC | 1 cut(s) | 458 |
| AcuI | CTGAAG | 1 cut(s) | 72 |
| AfaI | GTAC | 1 cut(s) | 455 |
| AgsI | TTSAA | 4 cut(s) | 86, 550, 569, 692 |
| AluBI | AGCT | 7 cut(s) | 89, 97, 344, 524, 575, 587, 662 |
| AluI | AGCT | 7 cut(s) | 89, 97, 344, 524, 575, 587, 662 |
| Alw26I | GTCTC | 3 cut(s) | 65, 278, 399 |
| AlwI | GGATC | 1 cut(s) | 458 |
| AspLEI | GCGC | 1 cut(s) | 256 |
| AspS9I | GGNCC | 1 cut(s) | 443 |
| AsuHPI | GGTGA | 4 cut(s) | 323, 383, 634, 659 |
| AvaII | GGWCC | 1 cut(s) | 443 |
| AxyI | CCTNAGG | 1 cut(s) | 681 |
| BauI | CACGAG | 1 cut(s) | 276 |
| BccI | CCATC | 1 cut(s) | 475 |
| BceAI | ACGGC | 1 cut(s) | 680 |
| BciVI | GTATCC | 1 cut(s) | 421 |
| BcoDI | GTCTC | 3 cut(s) | 65, 278, 399 |
| BfaI | CTAG | 1 cut(s) | 12 |
| BfmI | CTRYAG | 1 cut(s) | 324 |
| BfuI | GTATCC | 1 cut(s) | 421 |
| Bme18I | GGWCC | 1 cut(s) | 443 |
| BmgT120I | GGNCC | 1 cut(s) | 443 |
| BmiI | GGNNCC | 1 cut(s) | 180 |
| BpmI | CTGGAG | 1 cut(s) | 197 |
| BsaI | GGTCTC | 1 cut(s) | 278 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 31, 61 |
| Bse1I | ACTGG | 1 cut(s) | 180 |
| Bse21I | CCTNAGG | 1 cut(s) | 681 |
| Bse3DI | GCAATG | 4 cut(s) | 420, 491, 496, 642 |
| BseMI | GCAATG | 4 cut(s) | 420, 491, 496, 642 |
| BseMII | CTCAG | 3 cut(s) | 9, 528, 695 |
| BseNI | ACTGG | 1 cut(s) | 180 |
| BseRI | GAGGAG | 2 cut(s) | 45, 669 |
| BseYI | CCCAGC | 1 cut(s) | 425 |
| Bsh1236I | CGCG | 2 cut(s) | 254, 256 |
| BsmAI | GTCTC | 3 cut(s) | 65, 278, 399 |
| BsmBI | CGTCTC | 1 cut(s) | 65 |
| Bso31I | GGTCTC | 1 cut(s) | 278 |
| Bsp143I | GATC | 2 cut(s) | 352, 463 |
| BspCNI | CTCAG | 3 cut(s) | 10, 527, 694 |
| BspFNI | CGCG | 2 cut(s) | 254, 256 |
| BspLI | GGNNCC | 1 cut(s) | 180 |
| BspPI | GGATC | 1 cut(s) | 458 |
| BspTNI | GGTCTC | 1 cut(s) | 278 |
| BsrDI | GCAATG | 4 cut(s) | 420, 491, 496, 642 |
| BsrI | ACTGG | 1 cut(s) | 180 |
| BssMI | GATC | 2 cut(s) | 352, 463 |
| BssSI | CACGAG | 1 cut(s) | 276 |
| Bst2BI | CACGAG | 1 cut(s) | 276 |
| Bst4CI | ACNGT | 2 cut(s) | 325, 366 |
| Bst6I | CTCTTC | 2 cut(s) | 378, 570 |
| BstC8I | GCNNGC | 1 cut(s) | 273 |
| BstDEI | CTNAG | 3 cut(s) | 18, 514, 681 |
| BstFNI | CGCG | 2 cut(s) | 254, 256 |
| BstHHI | GCGC | 1 cut(s) | 256 |
| BstKTI | GATC | 2 cut(s) | 355, 466 |
| BstMAI | GTCTC | 3 cut(s) | 65, 278, 399 |
| BstMBI | GATC | 2 cut(s) | 352, 463 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 86, 653 |
| BstNSI | RCATGY | 1 cut(s) | 275 |
| BstSFI | CTRYAG | 1 cut(s) | 324 |
| BstUI | CGCG | 2 cut(s) | 254, 256 |
| BstX2I | RGATCY | 1 cut(s) | 463 |
| BstYI | RGATCY | 1 cut(s) | 463 |
| Bsu36I | CCTNAGG | 1 cut(s) | 681 |
| BsuI | GTATCC | 1 cut(s) | 421 |
| Cac8I | GCNNGC | 1 cut(s) | 273 |
| CfoI | GCGC | 1 cut(s) | 256 |
| Cfr13I | GGNCC | 1 cut(s) | 443 |
| CseI | GACGC | 1 cut(s) | 260 |
| Csp6I | GTAC | 1 cut(s) | 454 |
| CviAII | CATG | 2 cut(s) | 272, 431 |
| CviQI | GTAC | 1 cut(s) | 454 |
| DdeI | CTNAG | 3 cut(s) | 18, 514, 681 |
| DpnI | GATC | 2 cut(s) | 354, 465 |
| DpnII | GATC | 2 cut(s) | 352, 463 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 32 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 32 |
| Eam1104I | CTCTTC | 2 cut(s) | 378, 570 |
| EarI | CTCTTC | 2 cut(s) | 378, 570 |
| Eco31I | GGTCTC | 1 cut(s) | 278 |
| Eco47I | GGWCC | 1 cut(s) | 443 |
| Eco57I | CTGAAG | 1 cut(s) | 72 |
| Eco81I | CCTNAGG | 1 cut(s) | 681 |
| Esp3I | CGTCTC | 1 cut(s) | 65 |
| FaeI | CATG | 2 cut(s) | 275, 434 |
| FatI | CATG | 2 cut(s) | 271, 430 |
| FblI | GTMKAC | 1 cut(s) | 639 |
| FspBI | CTAG | 1 cut(s) | 12 |
| GlaI | GCGC | 1 cut(s) | 255 |
| GsaI | CCCAGC | 1 cut(s) | 429 |
| GsuI | CTGGAG | 1 cut(s) | 197 |
| HgaI | GACGC | 1 cut(s) | 260 |
| HhaI | GCGC | 1 cut(s) | 256 |
| Hin1II | CATG | 2 cut(s) | 275, 434 |
| Hin6I | GCGC | 1 cut(s) | 254 |
| HinP1I | GCGC | 1 cut(s) | 254 |
| HincII | GTYRAC | 1 cut(s) | 640 |
| HindII | GTYRAC | 1 cut(s) | 640 |
| HindIII | AAGCTT | 2 cut(s) | 95, 342 |
| HinfI | GANTC | 4 cut(s) | 33, 329, 386, 625 |
| HphI | GGTGA | 4 cut(s) | 323, 383, 634, 659 |
| Hpy166II | GTNNAC | 1 cut(s) | 640 |
| Hpy188I | TCNGA | 2 cut(s) | 243, 517 |
| Hpy188III | TCNNGA | 5 cut(s) | 50, 151, 471, 569, 683 |
| Hpy8I | GTNNAC | 1 cut(s) | 640 |
| HpyAV | CCTTC | 4 cut(s) | 47, 368, 425, 512 |
| HpyCH4III | ACNGT | 2 cut(s) | 325, 366 |
| HpyCH4V | TGCA | 4 cut(s) | 146, 275, 489, 494 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 86, 653 |
| HpyF3I | CTNAG | 3 cut(s) | 18, 514, 681 |
| Hsp92II | CATG | 2 cut(s) | 275, 434 |
| HspAI | GCGC | 1 cut(s) | 254 |
| Kzo9I | GATC | 2 cut(s) | 352, 463 |
| LmnI | GCTCC | 2 cut(s) | 178, 521 |
| MaeI | CTAG | 1 cut(s) | 12 |
| MaeIII | GTNAC | 1 cut(s) | 622 |
| MalI | GATC | 2 cut(s) | 354, 465 |
| MboI | GATC | 2 cut(s) | 352, 463 |
| MboII | GAAGA | 4 cut(s) | 208, 395, 557, 626 |
| MfeI | CAATTG | 1 cut(s) | 501 |
| MflI | RGATCY | 1 cut(s) | 463 |
| MluCI | AATT | 3 cut(s) | 207, 501, 545 |
| MlyI | GAGTC | 3 cut(s) | 42, 395, 619 |
| MnlI | CCTC | 6 cut(s) | 23, 124, 373, 679, 680, 690 |
| MunI | CAATTG | 1 cut(s) | 501 |
| MvnI | CGCG | 2 cut(s) | 254, 256 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 86, 653 |
| NdeII | GATC | 2 cut(s) | 352, 463 |
| NlaIII | CATG | 2 cut(s) | 275, 434 |
| NlaIV | GGNNCC | 1 cut(s) | 180 |
| NmeAIII | GCCGAG | 1 cut(s) | 207 |
| NmuCI | GTSAC | 1 cut(s) | 622 |
| NspI | RCATGY | 1 cut(s) | 275 |
| PaeI | GCATGC | 1 cut(s) | 275 |
| PfeI | GAWTC | 1 cut(s) | 329 |
| PleI | GAGTC | 3 cut(s) | 41, 394, 619 |
| PpsI | GAGTC | 3 cut(s) | 41, 394, 619 |
| PspFI | CCCAGC | 1 cut(s) | 425 |
| PspN4I | GGNNCC | 1 cut(s) | 180 |
| PspPI | GGNCC | 1 cut(s) | 443 |
| PsuI | RGATCY | 1 cut(s) | 463 |
| RsaI | GTAC | 1 cut(s) | 455 |
| RsaNI | GTAC | 1 cut(s) | 454 |
| SalI | GTCGAC | 1 cut(s) | 638 |
| Sau3AI | GATC | 2 cut(s) | 352, 463 |
| Sau96I | GGNCC | 1 cut(s) | 443 |
| SchI | GAGTC | 3 cut(s) | 42, 395, 619 |
| SfcI | CTRYAG | 1 cut(s) | 324 |
| SinI | GGWCC | 1 cut(s) | 443 |
| SphI | GCATGC | 1 cut(s) | 275 |
| Sse9I | AATT | 3 cut(s) | 207, 501, 545 |
| SspMI | CTAG | 1 cut(s) | 12 |
| TaaI | ACNGT | 2 cut(s) | 325, 366 |
| TaqI | TCGA | 2 cut(s) | 150, 639 |
| TaqII | GACCGA | 1 cut(s) | 460 |
| TasI | AATT | 3 cut(s) | 207, 501, 545 |
| TatI | WGTACW | 1 cut(s) | 453 |
| TfiI | GAWTC | 1 cut(s) | 329 |
| TseFI | GTSAC | 1 cut(s) | 622 |
| Tsp45I | GTSAC | 1 cut(s) | 622 |
| TspDTI | ATGAA | 1 cut(s) | 450 |
| VpaK11BI | GGWCC | 1 cut(s) | 443 |
| XceI | RCATGY | 1 cut(s) | 275 |
| XmiI | GTMKAC | 1 cut(s) | 639 |
| XspI | CTAG | 1 cut(s) | 12 |