The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G53850 AT1G53850 AT3G14290 |
| fragaria_vesca | FvH4_3g12370 |
| malus_domestica | MD05G1251400.v1.1 MD10G1231900.v1.1 |
| prunus_persica | Prupe.4G112400_v2.0.a1 Prupe.4G112400_v2.0.a1 |
| pyrus_communis | pycom10g19520 |
| rosa_chinensis | RchiOBHm_Chr5g0020181 |
| rosa_laevigata | RLG00000032507 |
| rosa_multiflora | Rmu_sc0000116.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00058020 |
| rosa_rugosa | Rorug05G0057500 |
| rosa_samantha | Rh5AG147900 Rh5BG147500 Rh5CG158900 Rh5DG146600 |
| rosa_wichuraiana | Rw5G013080 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 328 |
| Acc36I | ACCTGC | 1 cut(s) | 48 |
| AccI | GTMKAC | 1 cut(s) | 332 |
| AclWI | GGATC | 1 cut(s) | 458 |
| AfaI | GTAC | 3 cut(s) | 259, 455, 680 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 57, 691 |
| AflII | CTTAAG | 1 cut(s) | 599 |
| AgsI | TTSAA | 4 cut(s) | 269, 284, 539, 569 |
| AluBI | AGCT | 5 cut(s) | 344, 450, 500, 531, 575 |
| AluI | AGCT | 5 cut(s) | 344, 450, 500, 531, 575 |
| Alw21I | GWGCWC | 1 cut(s) | 441 |
| Alw26I | GTCTC | 2 cut(s) | 399, 572 |
| AlwI | GGATC | 1 cut(s) | 458 |
| AoxI | GGCC | 3 cut(s) | 87, 443, 699 |
| ApaI | GGGCCC | 1 cut(s) | 447 |
| AspLEI | GCGC | 1 cut(s) | 159 |
| AspS9I | GGNCC | 2 cut(s) | 443, 444 |
| AsuHPI | GGTGA | 5 cut(s) | 323, 383, 389, 634, 640 |
| BaeGI | GKGCMC | 1 cut(s) | 447 |
| BanII | GRGCYC | 1 cut(s) | 447 |
| BauI | CACGAG | 1 cut(s) | 276 |
| Bbv12I | GWGCWC | 1 cut(s) | 441 |
| BccI | CCATC | 3 cut(s) | 89, 98, 475 |
| BceAI | ACGGC | 1 cut(s) | 686 |
| BcoDI | GTCTC | 2 cut(s) | 399, 572 |
| BfrI | CTTAAG | 1 cut(s) | 599 |
| BfuAI | ACCTGC | 1 cut(s) | 48 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 86 |
| BmgT120I | GGNCC | 2 cut(s) | 443, 444 |
| BmiI | GGNNCC | 2 cut(s) | 180, 445 |
| BmsI | GCATC | 2 cut(s) | 168, 241 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 29, 59 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 57, 691 |
| Bse3DI | GCAATG | 2 cut(s) | 496, 705 |
| BseGI | GGATG | 1 cut(s) | 230 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 57, 691 |
| BseMI | GCAATG | 2 cut(s) | 496, 705 |
| BseMII | CTCAG | 4 cut(s) | 9, 302, 567, 681 |
| BseRI | GAGGAG | 1 cut(s) | 45 |
| BseSI | GKGCMC | 1 cut(s) | 447 |
| BseYI | CCCAGC | 2 cut(s) | 182, 446 |
| BshFI | GGCC | 3 cut(s) | 89, 445, 701 |
| BsiHKAI | GWGCWC | 1 cut(s) | 441 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 57, 691 |
| BsmAI | GTCTC | 2 cut(s) | 399, 572 |
| BsnI | GGCC | 3 cut(s) | 89, 445, 701 |
| Bsp120I | GGGCCC | 1 cut(s) | 443 |
| Bsp1286I | GDGCHC | 2 cut(s) | 441, 447 |
| Bsp1407I | TGTACA | 1 cut(s) | 678 |
| Bsp143I | GATC | 1 cut(s) | 463 |
| BspANI | GGCC | 3 cut(s) | 89, 445, 701 |
| BspCNI | CTCAG | 4 cut(s) | 10, 301, 568, 682 |
| BspHI | TCATGA | 1 cut(s) | 430 |
| BspLI | GGNNCC | 2 cut(s) | 180, 445 |
| BspMI | ACCTGC | 1 cut(s) | 48 |
| BspPI | GGATC | 1 cut(s) | 458 |
| BspTI | CTTAAG | 1 cut(s) | 599 |
| BsrDI | GCAATG | 2 cut(s) | 496, 705 |
| BsrGI | TGTACA | 1 cut(s) | 678 |
| BssMI | GATC | 1 cut(s) | 463 |
| BssSI | CACGAG | 1 cut(s) | 276 |
| Bst2BI | CACGAG | 1 cut(s) | 276 |
| Bst4CI | ACNGT | 2 cut(s) | 325, 628 |
| Bst6I | CTCTTC | 3 cut(s) | 378, 540, 570 |
| BstAFI | CTTAAG | 1 cut(s) | 599 |
| BstAUI | TGTACA | 1 cut(s) | 678 |
| BstC8I | GCNNGC | 2 cut(s) | 144, 712 |
| BstDEI | CTNAG | 4 cut(s) | 18, 288, 576, 690 |
| BstF5I | GGATG | 1 cut(s) | 230 |
| BstHHI | GCGC | 1 cut(s) | 159 |
| BstKTI | GATC | 1 cut(s) | 466 |
| BstMAI | GTCTC | 2 cut(s) | 399, 572 |
| BstMBI | GATC | 1 cut(s) | 463 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 86, 707 |
| BstNSI | RCATGY | 1 cut(s) | 275 |
| BstSLI | GKGCMC | 1 cut(s) | 447 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 97, 190 |
| BsuRI | GGCC | 3 cut(s) | 89, 445, 701 |
| BtsCI | GGATG | 1 cut(s) | 230 |
| BtsI | GCAGTG | 2 cut(s) | 193, 491 |
| BtsIMutI | CAGTG | 2 cut(s) | 193, 491 |
| BveI | ACCTGC | 1 cut(s) | 48 |
| Cac8I | GCNNGC | 2 cut(s) | 144, 712 |
| CciI | TCATGA | 1 cut(s) | 430 |
| CfoI | GCGC | 1 cut(s) | 159 |
| Cfr13I | GGNCC | 2 cut(s) | 443, 444 |
| Csp6I | GTAC | 3 cut(s) | 258, 454, 679 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 306, 341 |
| CviAII | CATG | 4 cut(s) | 232, 272, 391, 431 |
| CviQI | GTAC | 3 cut(s) | 258, 454, 679 |
| DdeI | CTNAG | 4 cut(s) | 18, 288, 576, 690 |
| DpnI | GATC | 1 cut(s) | 465 |
| DpnII | GATC | 1 cut(s) | 463 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 328 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 328 |
| Eam1104I | CTCTTC | 3 cut(s) | 378, 540, 570 |
| EarI | CTCTTC | 3 cut(s) | 378, 540, 570 |
| Eco24I | GRGCYC | 1 cut(s) | 447 |
| Eco32I | GATATC | 1 cut(s) | 649 |
| EcoRV | GATATC | 1 cut(s) | 649 |
| EcoT38I | GRGCYC | 1 cut(s) | 447 |
| FaeI | CATG | 4 cut(s) | 235, 275, 394, 434 |
| FatI | CATG | 4 cut(s) | 231, 271, 390, 430 |
| FblI | GTMKAC | 1 cut(s) | 332 |
| FokI | GGATG | 1 cut(s) | 237 |
| FriOI | GRGCYC | 1 cut(s) | 447 |
| GlaI | GCGC | 1 cut(s) | 158 |
| GsaI | CCCAGC | 2 cut(s) | 186, 450 |
| HaeIII | GGCC | 3 cut(s) | 89, 445, 701 |
| HhaI | GCGC | 1 cut(s) | 159 |
| Hin1II | CATG | 4 cut(s) | 235, 275, 394, 434 |
| Hin6I | GCGC | 1 cut(s) | 157 |
| HinP1I | GCGC | 1 cut(s) | 157 |
| HinfI | GANTC | 4 cut(s) | 292, 329, 386, 562 |
| HphI | GGTGA | 5 cut(s) | 323, 383, 389, 634, 640 |
| Hpy166II | GTNNAC | 5 cut(s) | 37, 239, 260, 333, 681 |
| Hpy188I | TCNGA | 3 cut(s) | 291, 517, 691 |
| Hpy188III | TCNNGA | 4 cut(s) | 396, 431, 539, 569 |
| Hpy8I | GTNNAC | 5 cut(s) | 37, 239, 260, 333, 681 |
| HpyAV | CCTTC | 3 cut(s) | 47, 125, 368 |
| HpyCH4III | ACNGT | 2 cut(s) | 325, 628 |
| HpyCH4V | TGCA | 4 cut(s) | 110, 275, 489, 494 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 86, 707 |
| HpyF3I | CTNAG | 4 cut(s) | 18, 288, 576, 690 |
| Hsp92II | CATG | 4 cut(s) | 235, 275, 394, 434 |
| HspAI | GCGC | 1 cut(s) | 157 |
| Kzo9I | GATC | 1 cut(s) | 463 |
| LmnI | GCTCC | 1 cut(s) | 521 |
| LpnPI | CCDG | 8 cut(s) | 43, 53, 161, 196, 411, 456, 460, 495 |
| LweI | GCATC | 2 cut(s) | 168, 241 |
| MaeIII | GTNAC | 3 cut(s) | 350, 622, 628 |
| MalI | GATC | 1 cut(s) | 465 |
| MboI | GATC | 1 cut(s) | 463 |
| MboII | GAAGA | 4 cut(s) | 395, 527, 557, 626 |
| MfeI | CAATTG | 2 cut(s) | 111, 582 |
| MhlI | GDGCHC | 2 cut(s) | 441, 447 |
| MluCI | AATT | 5 cut(s) | 111, 198, 207, 420, 582 |
| MlyI | GAGTC | 3 cut(s) | 338, 395, 556 |
| MmeI | TCCRAC | 1 cut(s) | 689 |
| MnlI | CCTC | 6 cut(s) | 23, 79, 511, 685, 691, 697 |
| MseI | TTAA | 1 cut(s) | 600 |
| MspCI | CTTAAG | 1 cut(s) | 599 |
| MunI | CAATTG | 2 cut(s) | 111, 582 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 86, 707 |
| NdeII | GATC | 1 cut(s) | 463 |
| NlaIII | CATG | 4 cut(s) | 235, 275, 394, 434 |
| NlaIV | GGNNCC | 2 cut(s) | 180, 445 |
| NmuCI | GTSAC | 3 cut(s) | 350, 622, 628 |
| NspI | RCATGY | 1 cut(s) | 275 |
| PagI | TCATGA | 1 cut(s) | 430 |
| PfeI | GAWTC | 1 cut(s) | 292 |
| PleI | GAGTC | 3 cut(s) | 337, 394, 556 |
| PpsI | GAGTC | 3 cut(s) | 337, 394, 556 |
| PspFI | CCCAGC | 2 cut(s) | 182, 446 |
| PspN4I | GGNNCC | 2 cut(s) | 180, 445 |
| PspOMI | GGGCCC | 1 cut(s) | 443 |
| PspPI | GGNCC | 2 cut(s) | 443, 444 |
| RsaI | GTAC | 3 cut(s) | 259, 455, 680 |
| RsaNI | GTAC | 3 cut(s) | 258, 454, 679 |
| SaqAI | TTAA | 1 cut(s) | 600 |
| Sau3AI | GATC | 1 cut(s) | 463 |
| Sau96I | GGNCC | 2 cut(s) | 443, 444 |
| SchI | GAGTC | 3 cut(s) | 338, 395, 556 |
| SduI | GDGCHC | 2 cut(s) | 441, 447 |
| SfaNI | GCATC | 2 cut(s) | 168, 241 |
| SmlI | CTYRAG | 1 cut(s) | 599 |
| SmoI | CTYRAG | 1 cut(s) | 599 |
| Sse9I | AATT | 5 cut(s) | 111, 198, 207, 420, 582 |
| TaaI | ACNGT | 2 cut(s) | 325, 628 |
| TaqI | TCGA | 3 cut(s) | 84, 104, 397 |
| TasI | AATT | 5 cut(s) | 111, 198, 207, 420, 582 |
| TatI | WGTACW | 1 cut(s) | 678 |
| TfiI | GAWTC | 1 cut(s) | 292 |
| Tru1I | TTAA | 1 cut(s) | 600 |
| Tru9I | TTAA | 1 cut(s) | 600 |
| TscAI | CASTG | 2 cut(s) | 193, 491 |
| TseFI | GTSAC | 3 cut(s) | 350, 622, 628 |
| Tsp45I | GTSAC | 3 cut(s) | 350, 622, 628 |
| TspDTI | ATGAA | 1 cut(s) | 396 |
| TspRI | CASTG | 2 cut(s) | 193, 491 |
| Vha464I | CTTAAG | 1 cut(s) | 599 |
| XceI | RCATGY | 1 cut(s) | 275 |
| XmiI | GTMKAC | 1 cut(s) | 332 |