The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G35130 AT2G35130 AT2G35130 |
| fragaria_vesca | FvH4_3g12360 |
| malus_domestica | MD05G1251300.v1.1 MD10G1231700.v1.1 MD10G1231800.v1.1 |
| prunus_persica | Prupe.4G112600_v2.0.a1 |
| pyrus_communis | pycom05g20750 pycom05g22900 pycom10g19500 pycom10g19510 |
| rosa_chinensis | RchiOBHm_Chr5g0020151 |
| rosa_laevigata | RLG00000032505 |
| rosa_roxburghii | Rroxscaffold_1G00058050 |
| rosa_rugosa | Rorug05G0057400 Rorug05G0057500 |
| rosa_samantha | Rh5AG147600 Rh5AG147700 Rh5BG147200 Rh5CG158600 Rh5DG146500 |
| rosa_wichuraiana | Rw5G013050 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 357 |
| Acc16I | TGCGCA | 1 cut(s) | 2015 |
| Acc36I | ACCTGC | 1 cut(s) | 1610 |
| AccBSI | CCGCTC | 1 cut(s) | 191 |
| AccII | CGCG | 4 cut(s) | 224, 296, 1661, 1830 |
| AccIII | TCCGGA | 1 cut(s) | 781 |
| AclWI | GGATC | 5 cut(s) | 1511, 1568, 1695, 1978, 2535 |
| AcoI | YGGCCR | 1 cut(s) | 2574 |
| AcsI | RAATTY | 2 cut(s) | 237, 2143 |
| AcuI | CTGAAG | 4 cut(s) | 482, 1563, 2081, 2223 |
| AcyI | GRCGYC | 1 cut(s) | 354 |
| AfaI | GTAC | 9 cut(s) | 497, 516, 767, 824, 2340, 2461, 2505, 2616, 2722 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 925, 1322, 1583, 1993, 2207, 2255 |
| AhlI | ACTAGT | 1 cut(s) | 2417 |
| AjnI | CCWGG | 3 cut(s) | 1356, 1964, 2314 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1030, 1062 |
| Alw21I | GWGCWC | 4 cut(s) | 411, 2026, 2337, 2653 |
| Alw26I | GTCTC | 6 cut(s) | 304, 361, 1464, 1953, 2219, 2598 |
| AlwI | GGATC | 5 cut(s) | 1511, 1568, 1695, 1978, 2535 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 460, 2168 |
| Aor13HI | TCCGGA | 1 cut(s) | 781 |
| AoxI | GGCC | 8 cut(s) | 164, 231, 444, 465, 1313, 1354, 1856, 2574 |
| ApeKI | GCWGC | 8 cut(s) | 311, 1004, 1706, 1867, 1943, 2168, 2440, 2582 |
| ApoI | RAATTY | 2 cut(s) | 237, 2143 |
| AseI | ATTAAT | 1 cut(s) | 1901 |
| AspLEI | GCGC | 7 cut(s) | 226, 416, 732, 1187, 1264, 1832, 2016 |
| AspS9I | GGNCC | 5 cut(s) | 165, 232, 1313, 1354, 1750 |
| AsuHPI | GGTGA | 4 cut(s) | 388, 733, 1682, 1781 |
| AsuII | TTCGAA | 1 cut(s) | 878 |
| AvaII | GGWCC | 1 cut(s) | 1750 |
| BaeGI | GKGCMC | 1 cut(s) | 2630 |
| BalI | TGGCCA | 1 cut(s) | 2576 |
| BanII | GRGCYC | 2 cut(s) | 411, 2026 |
| BauI | CACGAG | 1 cut(s) | 2676 |
| BbsI | GAAGAC | 2 cut(s) | 615, 1664 |
| Bbv12I | GWGCWC | 4 cut(s) | 411, 2026, 2337, 2653 |
| BbvCI | CCTCAGC | 1 cut(s) | 894 |
| BbvI | GCAGC | 8 cut(s) | 323, 991, 1718, 1879, 1955, 2155, 2452, 2569 |
| BceAI | ACGGC | 6 cut(s) | 89, 313, 362, 615, 2396, 2442 |
| BciT130I | CCWGG | 3 cut(s) | 1358, 1966, 2316 |
| BclI | TGATCA | 1 cut(s) | 2134 |
| BcoDI | GTCTC | 6 cut(s) | 304, 361, 1464, 1953, 2219, 2598 |
| BcuI | ACTAGT | 1 cut(s) | 2417 |
| BfmI | CTRYAG | 4 cut(s) | 555, 2045, 2169, 2463 |
| BfoI | RGCGCY | 1 cut(s) | 1265 |
| BfuAI | ACCTGC | 1 cut(s) | 1610 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 443 |
| BglII | AGATCT | 1 cut(s) | 2002 |
| BmcAI | AGTACT | 1 cut(s) | 516 |
| Bme1390I | CCNGG | 3 cut(s) | 1358, 1966, 2316 |
| Bme18I | GGWCC | 1 cut(s) | 1750 |
| BmgT120I | GGNCC | 5 cut(s) | 165, 232, 1313, 1354, 1750 |
| BmiI | GGNNCC | 6 cut(s) | 780, 834, 1291, 1570, 1751, 2456 |
| BmrFI | CCNGG | 3 cut(s) | 1358, 1966, 2316 |
| BmsI | GCATC | 7 cut(s) | 649, 790, 1150, 1178, 1370, 1614, 2186 |
| BpiI | GAAGAC | 2 cut(s) | 615, 1664 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 341, 373 |
| BpmI | CTGGAG | 3 cut(s) | 566, 1707, 2337 |
| Bpu10I | CCTNAGC | 2 cut(s) | 469, 894 |
| Bpu14I | TTCGAA | 1 cut(s) | 878 |
| BpuEI | CTTGAG | 4 cut(s) | 539, 1154, 1484, 2675 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1974 |
| BsaHI | GRCGYC | 1 cut(s) | 354 |
| BsaI | GGTCTC | 1 cut(s) | 304 |
| BsaJI | CCNNGG | 5 cut(s) | 207, 294, 1418, 1710, 1965 |
| BsaWI | WCCGGW | 1 cut(s) | 781 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 170, 200, 941, 971 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 925, 1322, 1583, 1993, 2207, 2255 |
| Bse1I | ACTGG | 4 cut(s) | 1173, 1327, 1693, 1926 |
| Bse3DI | GCAATG | 1 cut(s) | 503 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1974 |
| BseAI | TCCGGA | 1 cut(s) | 781 |
| BseBI | CCWGG | 3 cut(s) | 1358, 1966, 2316 |
| BseDI | CCNNGG | 5 cut(s) | 207, 294, 1418, 1710, 1965 |
| BseJI | GATNNNNATC | 1 cut(s) | 1974 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 925, 1322, 1583, 1993, 2207, 2255 |
| BseMI | GCAATG | 1 cut(s) | 503 |
| BseMII | CTCAG | 7 cut(s) | 876, 885, 1028, 1323, 1943, 2296, 2609 |
| BseNI | ACTGG | 4 cut(s) | 1173, 1327, 1693, 1926 |
| BseRI | GAGGAG | 1 cut(s) | 46 |
| BseSI | GKGCMC | 1 cut(s) | 2630 |
| BseXI | GCAGC | 8 cut(s) | 323, 991, 1718, 1879, 1955, 2155, 2452, 2569 |
| Bsh1236I | CGCG | 4 cut(s) | 224, 296, 1661, 1830 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1228 |
| BshFI | GGCC | 8 cut(s) | 166, 233, 446, 467, 1315, 1356, 1858, 2576 |
| BsiEI | CGRYCG | 1 cut(s) | 1228 |
| BsiHKAI | GWGCWC | 4 cut(s) | 411, 2026, 2337, 2653 |
| BsiSI | CCGG | 1 cut(s) | 782 |
| BslFI | GGGAC | 3 cut(s) | 2292, 2341, 2411 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 925, 1322, 1583, 1993, 2207, 2255 |
| BsmAI | GTCTC | 6 cut(s) | 304, 361, 1464, 1953, 2219, 2598 |
| BsmBI | CGTCTC | 2 cut(s) | 361, 1953 |
| BsmFI | GGGAC | 3 cut(s) | 2292, 2341, 2411 |
| BsmI | GAATGC | 2 cut(s) | 886, 2413 |
| BsnI | GGCC | 8 cut(s) | 166, 233, 446, 467, 1315, 1356, 1858, 2576 |
| Bso31I | GGTCTC | 1 cut(s) | 304 |
| Bsp119I | TTCGAA | 1 cut(s) | 878 |
| Bsp1286I | GDGCHC | 5 cut(s) | 411, 2026, 2337, 2630, 2653 |
| Bsp13I | TCCGGA | 1 cut(s) | 781 |
| Bsp1407I | TGTACA | 2 cut(s) | 2614, 2720 |
| Bsp19I | CCATGG | 3 cut(s) | 207, 1418, 1710 |
| BspANI | GGCC | 8 cut(s) | 166, 233, 446, 467, 1315, 1356, 1858, 2576 |
| BspCNI | CTCAG | 7 cut(s) | 877, 886, 1027, 1322, 1942, 2295, 2608 |
| BspEI | TCCGGA | 1 cut(s) | 781 |
| BspFNI | CGCG | 4 cut(s) | 224, 296, 1661, 1830 |
| BspHI | TCATGA | 1 cut(s) | 1978 |
| BspLI | GGNNCC | 6 cut(s) | 780, 834, 1291, 1570, 1751, 2456 |
| BspMAI | CTGCAG | 2 cut(s) | 2173, 2467 |
| BspMI | ACCTGC | 1 cut(s) | 1610 |
| BspPI | GGATC | 5 cut(s) | 1511, 1568, 1695, 1978, 2535 |
| BspT104I | TTCGAA | 1 cut(s) | 878 |
| BspTNI | GGTCTC | 1 cut(s) | 304 |
| BsrBI | CCGCTC | 1 cut(s) | 191 |
| BsrDI | GCAATG | 1 cut(s) | 503 |
| BsrGI | TGTACA | 2 cut(s) | 2614, 2720 |
| BsrI | ACTGG | 4 cut(s) | 1173, 1327, 1693, 1926 |
| BssECI | CCNNGG | 5 cut(s) | 207, 294, 1418, 1710, 1965 |
| BssNI | GRCGYC | 1 cut(s) | 354 |
| BssSI | CACGAG | 1 cut(s) | 2676 |
| BssT1I | CCWWGG | 3 cut(s) | 207, 1418, 1710 |
| Bst2BI | CACGAG | 1 cut(s) | 2676 |
| Bst2UI | CCWGG | 3 cut(s) | 1358, 1966, 2316 |
| Bst4CI | ACNGT | 7 cut(s) | 713, 1458, 2198, 2302, 2332, 2524, 2725 |
| Bst6I | CTCTTC | 3 cut(s) | 83, 632, 1956 |
| BstACI | GRCGYC | 1 cut(s) | 354 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 573 |
| BstAUI | TGTACA | 2 cut(s) | 2614, 2720 |
| BstBI | TTCGAA | 1 cut(s) | 878 |
| BstC8I | GCNNGC | 3 cut(s) | 1395, 1406, 2649 |
| BstDSI | CCRYGG | 4 cut(s) | 207, 294, 1418, 1710 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1581 |
| BstFNI | CGCG | 4 cut(s) | 224, 296, 1661, 1830 |
| BstH2I | RGCGCY | 1 cut(s) | 1265 |
| BstHHI | GCGC | 7 cut(s) | 226, 416, 732, 1187, 1264, 1832, 2016 |
| BstMAI | GTCTC | 6 cut(s) | 304, 361, 1464, 1953, 2219, 2598 |
| BstMCI | CGRYCG | 1 cut(s) | 1228 |
| BstNI | CCWGG | 3 cut(s) | 1358, 1966, 2316 |
| BstSCI | CCNGG | 3 cut(s) | 1356, 1964, 2314 |
| BstSFI | CTRYAG | 4 cut(s) | 555, 2045, 2169, 2463 |
| BstSLI | GKGCMC | 1 cut(s) | 2630 |
| BstUI | CGCG | 4 cut(s) | 224, 296, 1661, 1830 |
| BstV1I | GCAGC | 8 cut(s) | 323, 991, 1718, 1879, 1955, 2155, 2452, 2569 |
| BstV2I | GAAGAC | 2 cut(s) | 615, 1664 |
| BstX2I | RGATCY | 4 cut(s) | 1503, 1983, 2002, 2527 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 208 |
| BstYI | RGATCY | 4 cut(s) | 1503, 1983, 2002, 2527 |
| BsuRI | GGCC | 8 cut(s) | 166, 233, 446, 467, 1315, 1356, 1858, 2576 |
| BtgI | CCRYGG | 4 cut(s) | 207, 294, 1418, 1710 |
| BtgZI | GCGATG | 2 cut(s) | 292, 2563 |
| BtsIMutI | CAGTG | 3 cut(s) | 1022, 2337, 2529 |
| BveI | ACCTGC | 1 cut(s) | 1610 |
| Cac8I | GCNNGC | 3 cut(s) | 1395, 1406, 2649 |
| CaiI | CAGNNNCTG | 2 cut(s) | 460, 2168 |
| CciI | TCATGA | 1 cut(s) | 1978 |
| CfoI | GCGC | 7 cut(s) | 226, 416, 732, 1187, 1264, 1832, 2016 |
| Cfr13I | GGNCC | 5 cut(s) | 165, 232, 1313, 1354, 1750 |
| Cfr42I | CCGCGG | 1 cut(s) | 297 |
| CseI | GACGC | 1 cut(s) | 1935 |
| Csp6I | GTAC | 9 cut(s) | 496, 515, 766, 823, 2339, 2460, 2504, 2615, 2721 |
| CviQI | GTAC | 9 cut(s) | 496, 515, 766, 823, 2339, 2460, 2504, 2615, 2721 |
| DraI | TTTAAA | 1 cut(s) | 2664 |
| EaeI | YGGCCR | 1 cut(s) | 2574 |
| Eam1104I | CTCTTC | 3 cut(s) | 83, 632, 1956 |
| EarI | CTCTTC | 3 cut(s) | 83, 632, 1956 |
| EciI | GGCGGA | 5 cut(s) | 208, 292, 315, 2467, 2561 |
| Ecl136II | GAGCTC | 2 cut(s) | 409, 2024 |
| Eco130I | CCWWGG | 3 cut(s) | 207, 1418, 1710 |
| Eco147I | AGGCCT | 2 cut(s) | 446, 467 |
| Eco24I | GRGCYC | 2 cut(s) | 411, 2026 |
| Eco31I | GGTCTC | 1 cut(s) | 304 |
| Eco32I | GATATC | 2 cut(s) | 1095, 1273 |
| Eco47I | GGWCC | 1 cut(s) | 1750 |
| Eco53kI | GAGCTC | 2 cut(s) | 409, 2024 |
| Eco57I | CTGAAG | 4 cut(s) | 482, 1563, 2081, 2223 |
| EcoICRI | GAGCTC | 2 cut(s) | 409, 2024 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1581 |
| EcoO109I | RGGNCCY | 2 cut(s) | 1313, 1750 |
| EcoRII | CCWGG | 3 cut(s) | 1356, 1964, 2314 |
| EcoRV | GATATC | 2 cut(s) | 1095, 1273 |
| EcoT14I | CCWWGG | 3 cut(s) | 207, 1418, 1710 |
| EcoT22I | ATGCAT | 1 cut(s) | 1783 |
| EcoT38I | GRGCYC | 2 cut(s) | 411, 2026 |
| ErhI | CCWWGG | 3 cut(s) | 207, 1418, 1710 |
| Esp3I | CGTCTC | 2 cut(s) | 361, 1953 |
| FalI | AAGNNNNNCTT | 8 cut(s) | 858, 890, 972, 1004, 1524, 1556, 2079, 2111 |
| FaqI | GGGAC | 3 cut(s) | 2292, 2341, 2411 |
| FauI | CCCGC | 2 cut(s) | 1319, 2436 |
| FbaI | TGATCA | 1 cut(s) | 2134 |
| FriOI | GRGCYC | 2 cut(s) | 411, 2026 |
| FspI | TGCGCA | 1 cut(s) | 2015 |
| GlaI | GCGC | 7 cut(s) | 225, 415, 731, 1186, 1263, 1831, 2015 |
| GsuI | CTGGAG | 3 cut(s) | 566, 1707, 2337 |
| HaeII | RGCGCY | 1 cut(s) | 1265 |
| HaeIII | GGCC | 8 cut(s) | 166, 233, 446, 467, 1315, 1356, 1858, 2576 |
| HapII | CCGG | 1 cut(s) | 782 |
| HgaI | GACGC | 1 cut(s) | 1935 |
| HhaI | GCGC | 7 cut(s) | 226, 416, 732, 1187, 1264, 1832, 2016 |
| Hin1I | GRCGYC | 1 cut(s) | 354 |
| Hin6I | GCGC | 7 cut(s) | 224, 414, 730, 1185, 1262, 1830, 2014 |
| HinP1I | GCGC | 7 cut(s) | 224, 414, 730, 1185, 1262, 1830, 2014 |
| HincII | GTYRAC | 1 cut(s) | 1633 |
| HindII | GTYRAC | 1 cut(s) | 1633 |
| HindIII | AAGCTT | 3 cut(s) | 272, 1412, 2553 |
| HinfI | GANTC | 8 cut(s) | 485, 589, 1136, 1535, 1772, 2115, 2280, 2591 |
| HpaI | GTTAAC | 1 cut(s) | 1633 |
| HpaII | CCGG | 1 cut(s) | 782 |
| HphI | GGTGA | 4 cut(s) | 388, 733, 1682, 1781 |
| Hpy166II | GTNNAC | 3 cut(s) | 370, 1490, 1633 |
| Hpy8I | GTNNAC | 3 cut(s) | 370, 1490, 1633 |
| Hpy99I | CGWCG | 1 cut(s) | 823 |
| HpyAV | CCTTC | 9 cut(s) | 55, 223, 253, 457, 664, 883, 1577, 1587, 2269 |
| HpyCH4III | ACNGT | 7 cut(s) | 713, 1458, 2198, 2302, 2332, 2524, 2725 |
| HpyCH4IV | ACGT | 3 cut(s) | 354, 821, 2431 |
| HpySE526I | ACGT | 3 cut(s) | 354, 821, 2431 |
| Hsp92I | GRCGYC | 1 cut(s) | 354 |
| HspAI | GCGC | 7 cut(s) | 224, 414, 730, 1185, 1262, 1830, 2014 |
| Kpn2I | TCCGGA | 1 cut(s) | 781 |
| Ksp22I | TGATCA | 1 cut(s) | 2134 |
| KspAI | GTTAAC | 1 cut(s) | 1633 |
| KspI | CCGCGG | 1 cut(s) | 297 |
| LmnI | GCTCC | 4 cut(s) | 832, 1079, 1134, 2454 |
| Lsp1109I | GCAGC | 8 cut(s) | 323, 991, 1718, 1879, 1955, 2155, 2452, 2569 |
| LweI | GCATC | 7 cut(s) | 649, 790, 1150, 1178, 1370, 1614, 2186 |
| MaeII | ACGT | 3 cut(s) | 354, 821, 2431 |
| MaeIII | GTNAC | 5 cut(s) | 106, 721, 1645, 1769, 2413 |
| MbiI | CCGCTC | 1 cut(s) | 191 |
| MfeI | CAATTG | 2 cut(s) | 1800, 2081 |
| MflI | RGATCY | 4 cut(s) | 1503, 1983, 2002, 2527 |
| MhlI | GDGCHC | 5 cut(s) | 411, 2026, 2337, 2630, 2653 |
| MlsI | TGGCCA | 1 cut(s) | 2576 |
| MluNI | TGGCCA | 1 cut(s) | 2576 |
| MlyI | GAGTC | 5 cut(s) | 1145, 1766, 2109, 2274, 2600 |
| MmeI | TCCRAC | 1 cut(s) | 777 |
| Mox20I | TGGCCA | 1 cut(s) | 2576 |
| Mph1103I | ATGCAT | 1 cut(s) | 1783 |
| MroI | TCCGGA | 1 cut(s) | 781 |
| MscI | TGGCCA | 1 cut(s) | 2576 |
| MseI | TTAA | 9 cut(s) | 693, 1632, 1667, 1809, 1853, 1901, 2154, 2355, 2663 |
| MslI | CAYNNNNRTG | 2 cut(s) | 206, 866 |
| Msp20I | TGGCCA | 1 cut(s) | 2576 |
| MspA1I | CMGCKG | 3 cut(s) | 296, 2443, 2501 |
| MspI | CCGG | 1 cut(s) | 782 |
| MspR9I | CCNGG | 3 cut(s) | 1358, 1966, 2316 |
| MunI | CAATTG | 2 cut(s) | 1800, 2081 |
| Mva1269I | GAATGC | 2 cut(s) | 886, 2413 |
| MvaI | CCWGG | 3 cut(s) | 1358, 1966, 2316 |
| MvnI | CGCG | 4 cut(s) | 224, 296, 1661, 1830 |
| NcoI | CCATGG | 3 cut(s) | 207, 1418, 1710 |
| NlaIV | GGNNCC | 6 cut(s) | 780, 834, 1291, 1570, 1751, 2456 |
| NmeAIII | GCCGAG | 1 cut(s) | 861 |
| NmuCI | GTSAC | 5 cut(s) | 106, 721, 1645, 1769, 2413 |
| NsbI | TGCGCA | 1 cut(s) | 2015 |
| NsiI | ATGCAT | 1 cut(s) | 1783 |
| NspV | TTCGAA | 1 cut(s) | 878 |
| PagI | TCATGA | 1 cut(s) | 1978 |
| PceI | AGGCCT | 2 cut(s) | 446, 467 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 156 |
| PctI | GAATGC | 2 cut(s) | 886, 2413 |
| PfeI | GAWTC | 3 cut(s) | 485, 589, 1535 |
| Ple19I | CGATCG | 1 cut(s) | 1228 |
| PleI | GAGTC | 5 cut(s) | 1144, 1766, 2109, 2274, 2599 |
| PpsI | GAGTC | 5 cut(s) | 1144, 1766, 2109, 2274, 2599 |
| PpuMI | RGGWCCY | 1 cut(s) | 1750 |
| PshBI | ATTAAT | 1 cut(s) | 1901 |
| Psp124BI | GAGCTC | 2 cut(s) | 411, 2026 |
| Psp5II | RGGWCCY | 1 cut(s) | 1750 |
| Psp6I | CCWGG | 3 cut(s) | 1356, 1964, 2314 |
| PspGI | CCWGG | 3 cut(s) | 1356, 1964, 2314 |
| PspN4I | GGNNCC | 6 cut(s) | 780, 834, 1291, 1570, 1751, 2456 |
| PspPI | GGNCC | 5 cut(s) | 165, 232, 1313, 1354, 1750 |
| PspPPI | RGGWCCY | 1 cut(s) | 1750 |
| PstI | CTGCAG | 2 cut(s) | 2173, 2467 |
| PstNI | CAGNNNCTG | 2 cut(s) | 460, 2168 |
| PsuI | RGATCY | 4 cut(s) | 1503, 1983, 2002, 2527 |
| PvuI | CGATCG | 1 cut(s) | 1228 |
| RsaI | GTAC | 9 cut(s) | 497, 516, 767, 824, 2340, 2461, 2505, 2616, 2722 |
| RsaNI | GTAC | 9 cut(s) | 496, 515, 766, 823, 2339, 2460, 2504, 2615, 2721 |
| RseI | CAYNNNNRTG | 2 cut(s) | 206, 866 |
| SacI | GAGCTC | 2 cut(s) | 411, 2026 |
| SacII | CCGCGG | 1 cut(s) | 297 |
| SaqAI | TTAA | 9 cut(s) | 693, 1632, 1667, 1809, 1853, 1901, 2154, 2355, 2663 |
| Sau96I | GGNCC | 5 cut(s) | 165, 232, 1313, 1354, 1750 |
| ScaI | AGTACT | 1 cut(s) | 516 |
| SchI | GAGTC | 5 cut(s) | 1145, 1766, 2109, 2274, 2600 |
| ScrFI | CCNGG | 3 cut(s) | 1358, 1966, 2316 |
| SduI | GDGCHC | 5 cut(s) | 411, 2026, 2337, 2630, 2653 |
| SfaNI | GCATC | 7 cut(s) | 649, 790, 1150, 1178, 1370, 1614, 2186 |
| SfcI | CTRYAG | 4 cut(s) | 555, 2045, 2169, 2463 |
| Sfr303I | CCGCGG | 1 cut(s) | 297 |
| SfuI | TTCGAA | 1 cut(s) | 878 |
| SgrBI | CCGCGG | 1 cut(s) | 297 |
| SinI | GGWCC | 1 cut(s) | 1750 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 206, 866 |
| SmlI | CTYRAG | 4 cut(s) | 518, 1133, 1463, 2654 |
| SmoI | CTYRAG | 4 cut(s) | 518, 1133, 1463, 2654 |
| SpeI | ACTAGT | 1 cut(s) | 2417 |
| SseBI | AGGCCT | 2 cut(s) | 446, 467 |
| SspI | AATATT | 1 cut(s) | 1513 |
| SstI | GAGCTC | 2 cut(s) | 411, 2026 |
| StuI | AGGCCT | 2 cut(s) | 446, 467 |
| StyD4I | CCNGG | 3 cut(s) | 1356, 1964, 2314 |
| StyI | CCWWGG | 3 cut(s) | 207, 1418, 1710 |
| TaaI | ACNGT | 7 cut(s) | 713, 1458, 2198, 2302, 2332, 2524, 2725 |
| TaiI | ACGT | 3 cut(s) | 357, 824, 2434 |
| TaqI | TCGA | 9 cut(s) | 150, 159, 348, 594, 878, 1224, 1228, 1373, 2251 |
| TaqII | GACCGA | 1 cut(s) | 1884 |
| TatI | WGTACW | 3 cut(s) | 514, 2614, 2720 |
| TauI | GCSGC | 8 cut(s) | 98, 101, 104, 224, 293, 296, 377, 440 |
| TfiI | GAWTC | 3 cut(s) | 485, 589, 1535 |
| Tru1I | TTAA | 9 cut(s) | 693, 1632, 1667, 1809, 1853, 1901, 2154, 2355, 2663 |
| Tru9I | TTAA | 9 cut(s) | 693, 1632, 1667, 1809, 1853, 1901, 2154, 2355, 2663 |
| TscAI | CASTG | 3 cut(s) | 1022, 2337, 2529 |
| TseFI | GTSAC | 5 cut(s) | 106, 721, 1645, 1769, 2413 |
| TseI | GCWGC | 8 cut(s) | 311, 1004, 1706, 1867, 1943, 2168, 2440, 2582 |
| Tsp45I | GTSAC | 5 cut(s) | 106, 721, 1645, 1769, 2413 |
| TspDTI | ATGAA | 8 cut(s) | 817, 1037, 1358, 1569, 1943, 2229, 2706, 2723 |
| TspGWI | ACGGA | 3 cut(s) | 160, 1218, 1516 |
| TspRI | CASTG | 3 cut(s) | 1022, 2337, 2529 |
| VpaK11BI | GGWCC | 1 cut(s) | 1750 |
| VspI | ATTAAT | 1 cut(s) | 1901 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1581 |
| XapI | RAATTY | 2 cut(s) | 237, 2143 |
| XbaI | TCTAGA | 2 cut(s) | 277, 1178 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 1348, 1416 |
| ZraI | GACGTC | 1 cut(s) | 355 |
| ZrmI | AGTACT | 1 cut(s) | 516 |
| Zsp2I | ATGCAT | 1 cut(s) | 1783 |