Rh5BG147200

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5B
OG0008257
Physical Location & Seq
Reverse (-)
15139785 .. 15143049
3265 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5BG147200.1

Sequence Viewer

Length: 1824 bp
ATGTTATCAAGACTATCTTCTTTCTTGCACACTCAAAACTCGCAAAATACCAAACGTCCAAACTGGAAGCTCTTCCTCCAAGTATTCATGTTGACTGTTGAGCGTGCCATTAGCTACATTTTCATTGGATCAAGAAGCTGCAAGACTAATTGCAGATGGAAAGCCAAGAGTTCCAATGGTGGAGCTGCTGAAAAGAGCAAGCCTAAGCTTGACACCATCTATATTGACAAACGCGGGAAATTCAGAAGCTTCAACCACAAGAAAGTGTCTAGGAAACGATGTGGTTCTCTAAGGAGCCGAGGATGGAAGTATGGATCCGGGTTTGTTGATGGAATTTTCCCAGTGATGAGCCCCACTGCTGAGCAGATTCTGGACATTGTACAGAACGAAGAGGATAGAATTAAAATATGGGAAGTTCTTGACACTCTTCCGGCCTCTCATATCATATGGGATGACATCATTAATGTAGCTGTTCAACTTCGTCTCAATAAAATGTGGGATTCCATAATCTTGATATGTGAGTGGATATTGCACAAGAGCTCCTACAAGCCAGATGTAATCTGCTACAATTTACTGCTAGACGCTTATGGGCAGAAATCACTACATAAAGAGGCAGAATCCACATATTTGGAACTTCTTGAAGCTCGATGCATTCCCACCGAGGACACTTATGCCCTTCTTATAAAGGCCTACTGCAAGTCTGGATTGCTAGATAGGGCTGAAGCCATTTTTGGTGAAATGCGCAAGTATGGTCTTCCTCCAAGTGCAATTGTGTTTGATGCTTATATTAATGGGTTGATAAAAGGAGGAAACCCTCAAAAAGCAGAAGAGATCTTTCAGAGGATGAAAAGAGATCAATGCGAACCATCTGCCGACACTTATACTATGTTAATCAATATATATGGGAAGGCAAGAAAATCCTTTATGGCCCTAAAACTGTTCCGCGAAATGAGAAGTCAGAAATGTAAACCGAACATATGCACATATACTGCTTTGATAAATGCATTTGCTAGGGAAGGAAATTGTGAGAAAGCAGAGGAGATATTTGAGCAGCTACAAGAGGCAGGGCTTGAGCCTGATGTGTATGCTTACAATGCCCTTATGGAAGCTTACAGTCGAGCAGGATATCCTTATGGAGCTGCAGAAATTTTCTCTTTGATGCAGCACATGGGATGTGAACCAGATAGAGCTTCATATAATATCATGGTAGATGCATATGGTAGAGGGGGTCTGCATGAAGACGCGCAAGCTGCGTTTGAAGAGATGAAGCGATTAGGAATAACCCCAACAATCAAATCCCATATGCTACTTTTATCTGCCTACTCCAAAGCTGGGAATGTAGCTAGATGTGAAGACATTGTGAACCAGATGCAAGAATCCGGGCTGGAGCTAGACACATTTGTGATTAACAGTATGCTAAACCTGTATGGCCGGCTAGGTCAGCTTGAAAAAATGGAGGAAGTTTTGACTGCACTGGAAAAAGGACCATATGCAGCTGATATCAGTACATATAACATCTTGATTAACATTTATGGAAGGGCAGGATTTTTCGACAAGATGGAAGAGCTCTTCCAATCACTTCCAGCAAAGAAATTAAAACCTGATGTTGTGACATGGACTTCTCGTCTTGGAGCATACTCTAGGAAGAAACTATACACAAGATGCTTGGAAATTTTTGAAGAAATGATTGATGCGGGTTGCTATCCAGATGGTGGAACTGCCAAAGTACTTCTTGCTTCCTGCTCAAGCGAAGATCAAACCAAGCAGGTTAGTGTTGTTATTAGAACAATGCACAAGGATGTGAGGACTGTCTTACCTATCTGA

Protein Analysis

607

Amino Acids

68.95

Weight (kDa)

8.49

Isoelectric Point (pI)

41.21

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 184 - 233 1.5e-09 PPR repeat family
PPR_1 PF12854 217 - 248 6e-08 PPR repeat
PPR PF01535 223 - 252 3.8e-07 PPR repeat
PPR_2 PF13041 223 - 268 1.3e-07 PPR repeat family
PPR_3 PF13812 243 - 303 1.9e-10 Pentatricopeptide repeat domain
PPR_2 PF13041 254 - 300 7.1e-10 PPR repeat family
PPR_long PF17177 274 - 375 3.4e-12 Pentacotripeptide-repeat region of PRORP
PPR_2 PF13041 293 - 338 1.8e-12 PPR repeat family
PPR PF01535 293 - 322 3.9e-06 PPR repeat
PPR_3 PF13812 293 - 336 7.8e-10 Pentatricopeptide repeat domain
PPR_3 PF13812 312 - 371 2.1e-15 Pentatricopeptide repeat domain
PPR_1 PF12854 322 - 351 3e-08 PPR repeat
PPR_2 PF13041 324 - 372 1.4e-12 PPR repeat family
PPR PF01535 328 - 357 1.4e-07 PPR repeat
TPR_24 PF23276 334 - 419 6.8e-07 Fungal tetratrico peptide repeats
PPR_3 PF13812 348 - 407 6.8e-12 Pentatricopeptide repeat domain
PPR_2 PF13041 359 - 406 8.2e-12 PPR repeat family
TPR_24 PF23276 373 - 484 6.1e-07 Fungal tetratrico peptide repeats
PPR_long PF17177 380 - 495 2.5e-08 Pentacotripeptide-repeat region of PRORP
PPR_1 PF12854 390 - 423 8e-07 PPR repeat
PPR PF01535 398 - 427 4e-07 PPR repeat
PPR_2 PF13041 398 - 433 9.5e-06 PPR repeat family
PPR_2 PF13041 500 - 541 3.6e-07 PPR repeat family
PPR_2 PF13041 534 - 581 4.8e-07 PPR repeat family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

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Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 683
Acc16I TGCGCA 1 cut(s) 743
Acc36I ACCTGC 1 cut(s) 1756
AccB7I CCANNNNNTGG 1 cut(s) 1712
AccII CGCG 3 cut(s) 234, 945, 1244
AciI CCGC 3 cut(s) 234, 943, 1694
AclWI GGATC 3 cut(s) 136, 309, 322
AcoI YGGCCR 1 cut(s) 1429
AcsI RAATTY 4 cut(s) 239, 333, 1146, 1671
AcuI CTGAAG 1 cut(s) 741
AfaI GTAC 3 cut(s) 381, 1507, 1728
AfiI CCNNNNNNNGG 2 cut(s) 1332, 1712
AgsI TTSAA 6 cut(s) 253, 476, 641, 1259, 1448, 1679
AhdI GACNNNNNGTC 1 cut(s) 1623
AjuI GAANNNNNNNTTGG 2 cut(s) 714, 746
AleI CACNNNNGTG 1 cut(s) 1400
Alw21I GWGCWC 2 cut(s) 542, 1569
Alw26I GTCTC 1 cut(s) 488
AlwI GGATC 3 cut(s) 136, 309, 322
AlwNI CAGNNNCTG 1 cut(s) 370
AoxI GGCC 4 cut(s) 432, 687, 927, 1429
ApeKI GCWGC 7 cut(s) 138, 185, 1051, 1139, 1162, 1250, 1493
ApoI RAATTY 4 cut(s) 239, 333, 1146, 1671
AseI ATTAAT 2 cut(s) 462, 789
Asp700I GAANNNNTTC 1 cut(s) 71
AspLEI GCGC 2 cut(s) 744, 1246
AspS9I GGNCC 2 cut(s) 928, 1484
AsuC2I CCSGG 2 cut(s) 319, 1381
AsuHPI GGTGA 1 cut(s) 746
AvaII GGWCC 1 cut(s) 1484
BamHI GGATCC 1 cut(s) 314
BanII GRGCYC 3 cut(s) 353, 542, 1569
BarI GAAGNNNNNNTAC 2 cut(s) 1637, 1669
BbsI GAAGAC 3 cut(s) 746, 1245, 1359
Bbv12I GWGCWC 2 cut(s) 542, 1569
BbvI GCAGC 7 cut(s) 125, 172, 1063, 1126, 1174, 1237, 1505
BccI CCATC 7 cut(s) 150, 224, 297, 323, 874, 1552, 1703
BcgI CGANNNNNNTGC 2 cut(s) 851, 885
BcnI CCSGG 2 cut(s) 319, 1381
BcoDI GTCTC 1 cut(s) 488
BfaI CTAG 8 cut(s) 270, 578, 710, 1011, 1344, 1391, 1436, 1641
BfmI CTRYAG 1 cut(s) 1140
BfuAI ACCTGC 1 cut(s) 1756
BglII AGATCT 1 cut(s) 831
BisI GCNGC 7 cut(s) 139, 186, 1052, 1140, 1163, 1251, 1494
BlpI GCTNAGC 1 cut(s) 360
BlsI GCNGC 7 cut(s) 140, 187, 1053, 1141, 1164, 1252, 1495
BmcAI AGTACT 1 cut(s) 1728
Bme1390I CCNGG 2 cut(s) 319, 1381
Bme18I GGWCC 1 cut(s) 1484
BmeRI GACNNNNNGTC 1 cut(s) 1623
BmgT120I GGNCC 2 cut(s) 928, 1484
BmiI GGNNCC 2 cut(s) 296, 316
BmrFI CCNGG 2 cut(s) 319, 1381
BmrI ACTGGG 1 cut(s) 335
BmsI GCATC 7 cut(s) 638, 769, 1149, 1201, 1359, 1652, 1681
BmuI ACTGGG 1 cut(s) 335
BpiI GAAGAC 3 cut(s) 746, 1245, 1359
BpmI CTGGAG 1 cut(s) 1406
Bpu10I CCTNAGC 1 cut(s) 204
Bpu1102I GCTNAGC 1 cut(s) 360
BpuEI CTTGAG 2 cut(s) 1091, 1729
BpuMI CCSGG 2 cut(s) 319, 1381
BsaJI CCNNGG 2 cut(s) 298, 660
BsaXI ACNNNNNCTCC 2 cut(s) 524, 554
Bsc4I CCNNNNNNNGG 2 cut(s) 1332, 1712
Bse118I RCCGGY 1 cut(s) 1431
Bse1I ACTGG 3 cut(s) 68, 341, 1479
BseDI CCNNGG 2 cut(s) 298, 660
BseGI GGATG 5 cut(s) 308, 457, 849, 1178, 1804
BseLI CCNNNNNNNGG 2 cut(s) 1332, 1712
BseMII CTCAG 1 cut(s) 351
BseNI ACTGG 3 cut(s) 68, 341, 1479
BseRI GAGGAG 1 cut(s) 1052
BseXI GCAGC 7 cut(s) 125, 172, 1063, 1126, 1174, 1237, 1505
BseYI CCCAGC 1 cut(s) 1331
BsgI GTGCAG 1 cut(s) 1455
Bsh1236I CGCG 3 cut(s) 234, 945, 1244
BshFI GGCC 4 cut(s) 434, 689, 929, 1431
BsiHKAI GWGCWC 2 cut(s) 542, 1569
BsiSI CCGG 4 cut(s) 318, 431, 1380, 1432
BslI CCNNNNNNNGG 2 cut(s) 1332, 1712
BsmAI GTCTC 1 cut(s) 488
BsmBI CGTCTC 1 cut(s) 488
BsmI GAATGC 1 cut(s) 651
BsnI GGCC 4 cut(s) 434, 689, 929, 1431
Bsp1286I GDGCHC 3 cut(s) 353, 542, 1569
Bsp1407I TGTACA 1 cut(s) 379
Bsp143I GATC 5 cut(s) 128, 314, 831, 853, 1753
Bsp1720I GCTNAGC 1 cut(s) 360
BspACI CCGC 3 cut(s) 234, 943, 1694
BspANI GGCC 4 cut(s) 434, 689, 929, 1431
BspCNI CTCAG 1 cut(s) 352
BspFNI CGCG 3 cut(s) 234, 945, 1244
BspLI GGNNCC 2 cut(s) 296, 316
BspMAI CTGCAG 1 cut(s) 1144
BspMI ACCTGC 1 cut(s) 1756
BspPI GGATC 3 cut(s) 136, 309, 322
BspQI GCTCTTC 3 cut(s) 77, 1557, 1574
BsrFI RCCGGY 1 cut(s) 1431
BsrGI TGTACA 1 cut(s) 379
BsrI ACTGG 3 cut(s) 68, 341, 1479
BssAI RCCGGY 1 cut(s) 1431
BssECI CCNNGG 2 cut(s) 298, 660
BssMI GATC 5 cut(s) 128, 314, 831, 853, 1753
Bst4CI ACNGT 5 cut(s) 97, 939, 1115, 1412, 1810
Bst6I CTCTTC 7 cut(s) 77, 384, 432, 822, 1254, 1557, 1574
BstAUI TGTACA 1 cut(s) 379
BstC8I GCNNGC 4 cut(s) 105, 200, 1248, 1433
BstDEI CTNAG 3 cut(s) 204, 290, 360
BstF5I GGATG 5 cut(s) 308, 457, 849, 1178, 1804
BstFNI CGCG 3 cut(s) 234, 945, 1244
BstHHI GCGC 2 cut(s) 744, 1246
BstKTI GATC 5 cut(s) 131, 317, 834, 856, 1756
BstMAI GTCTC 1 cut(s) 488
BstMBI GATC 5 cut(s) 128, 314, 831, 853, 1753
BstMWI GCNNNNNNNGC 3 cut(s) 1094, 1250, 1441
BstSCI CCNGG 2 cut(s) 317, 1379
BstSFI CTRYAG 1 cut(s) 1140
BstUI CGCG 3 cut(s) 234, 945, 1244
BstV1I GCAGC 7 cut(s) 125, 172, 1063, 1126, 1174, 1237, 1505
BstV2I GAAGAC 3 cut(s) 746, 1245, 1359
BstX2I RGATCY 2 cut(s) 314, 831
BstXI CCANNNNNNTGG 1 cut(s) 628
BstYI RGATCY 2 cut(s) 314, 831
BsuRI GGCC 4 cut(s) 434, 689, 929, 1431
BtsCI GGATG 5 cut(s) 308, 457, 849, 1178, 1804
BtsI GCAGTG 1 cut(s) 354
BtsIMutI CAGTG 3 cut(s) 348, 354, 1472
BveI ACCTGC 1 cut(s) 1756
Cac8I GCNNGC 4 cut(s) 105, 200, 1248, 1433
CaiI CAGNNNCTG 1 cut(s) 370
CfoI GCGC 2 cut(s) 744, 1246
Cfr10I RCCGGY 1 cut(s) 1431
Cfr13I GGNCC 2 cut(s) 928, 1484
CseI GACGC 2 cut(s) 590, 1250
Csp6I GTAC 3 cut(s) 380, 1506, 1727
CviAII CATG 5 cut(s) 88, 1168, 1204, 1235, 1614
CviQI GTAC 3 cut(s) 380, 1506, 1727
DdeI CTNAG 3 cut(s) 204, 290, 360
DpnI GATC 5 cut(s) 130, 316, 833, 855, 1755
DpnII GATC 5 cut(s) 128, 314, 831, 853, 1753
DriI GACNNNNNGTC 1 cut(s) 1623
EaeI YGGCCR 1 cut(s) 1429
Eam1104I CTCTTC 7 cut(s) 77, 384, 432, 822, 1254, 1557, 1574
Eam1105I GACNNNNNGTC 1 cut(s) 1623
EarI CTCTTC 7 cut(s) 77, 384, 432, 822, 1254, 1557, 1574
Ecl136II GAGCTC 2 cut(s) 540, 1567
Eco147I AGGCCT 1 cut(s) 689
Eco24I GRGCYC 3 cut(s) 353, 542, 1569
Eco32I GATATC 2 cut(s) 1127, 1501
Eco47I GGWCC 1 cut(s) 1484
Eco53kI GAGCTC 2 cut(s) 540, 1567
Eco57I CTGAAG 1 cut(s) 741
EcoICRI GAGCTC 2 cut(s) 540, 1567
EcoRV GATATC 2 cut(s) 1127, 1501
EcoT22I ATGCAT 3 cut(s) 653, 1006, 1216
EcoT38I GRGCYC 3 cut(s) 353, 542, 1569
Esp3I CGTCTC 1 cut(s) 488
FaeI CATG 5 cut(s) 91, 1171, 1207, 1238, 1617
FalI AAGNNNNNCTT 3 cut(s) 33, 1716, 1748
FatI CATG 5 cut(s) 87, 1167, 1203, 1234, 1613
FauI CCCGC 2 cut(s) 227, 1687
FauNDI CATATG 5 cut(s) 446, 977, 1216, 1302, 1489
Fnu4HI GCNGC 7 cut(s) 139, 186, 1052, 1140, 1163, 1251, 1494
FokI GGATG 5 cut(s) 315, 464, 856, 1185, 1811
FriOI GRGCYC 3 cut(s) 353, 542, 1569
Fsp4HI GCNGC 7 cut(s) 139, 186, 1052, 1140, 1163, 1251, 1494
FspBI CTAG 8 cut(s) 270, 578, 710, 1011, 1344, 1391, 1436, 1641
FspI TGCGCA 1 cut(s) 743
GlaI GCGC 2 cut(s) 743, 1245
GluI GCNGC 7 cut(s) 139, 186, 1052, 1140, 1163, 1251, 1494
GsaI CCCAGC 1 cut(s) 1335
GsuI CTGGAG 1 cut(s) 1406
HaeIII GGCC 4 cut(s) 434, 689, 929, 1431
HapII CCGG 4 cut(s) 318, 431, 1380, 1432
HgaI GACGC 2 cut(s) 590, 1250
HhaI GCGC 2 cut(s) 744, 1246
Hin1II CATG 5 cut(s) 91, 1171, 1207, 1238, 1617
Hin6I GCGC 2 cut(s) 742, 1244
HinP1I GCGC 2 cut(s) 742, 1244
HincII GTYRAC 1 cut(s) 93
HindII GTYRAC 1 cut(s) 93
HindIII AAGCTT 3 cut(s) 206, 247, 1107
HinfI GANTC 4 cut(s) 367, 500, 617, 1376
HpaII CCGG 4 cut(s) 318, 431, 1380, 1432
HphI GGTGA 1 cut(s) 746
Hpy166II GTNNAC 4 cut(s) 93, 968, 1178, 1363
Hpy188I TCNGA 4 cut(s) 245, 840, 960, 1823
Hpy188III TCNNGA 9 cut(s) 9, 132, 371, 419, 511, 638, 702, 1519, 1706
Hpy8I GTNNAC 4 cut(s) 93, 968, 1178, 1363
HpyAV CCTTC 4 cut(s) 686, 901, 1010, 1530
HpyCH4III ACNGT 5 cut(s) 97, 939, 1115, 1412, 1810
HpyCH4IV ACGT 1 cut(s) 55
HpyF10VI GCNNNNNNNGC 3 cut(s) 1094, 1250, 1441
HpyF3I CTNAG 3 cut(s) 204, 290, 360
HpySE526I ACGT 1 cut(s) 55
Hsp92II CATG 5 cut(s) 91, 1171, 1207, 1238, 1617
HspAI GCGC 2 cut(s) 742, 1244
KroI GCCGGC 1 cut(s) 1431
KroNI GCCGGC 1 cut(s) 1433
Kzo9I GATC 5 cut(s) 128, 314, 831, 853, 1753
LguI GCTCTTC 3 cut(s) 77, 1557, 1574
LmnI GCTCC 6 cut(s) 182, 294, 545, 1136, 1387, 1631
Lsp1109I GCAGC 7 cut(s) 125, 172, 1063, 1126, 1174, 1237, 1505
LweI GCATC 7 cut(s) 638, 769, 1149, 1201, 1359, 1652, 1681
MaeI CTAG 8 cut(s) 270, 578, 710, 1011, 1344, 1391, 1436, 1641
MaeII ACGT 1 cut(s) 55
MaeIII GTNAC 1 cut(s) 1609
MalI GATC 5 cut(s) 130, 316, 833, 855, 1755
MboI GATC 5 cut(s) 128, 314, 831, 853, 1753
MfeI CAATTG 1 cut(s) 768
MflI RGATCY 2 cut(s) 314, 831
MhlI GDGCHC 3 cut(s) 353, 542, 1569
Mph1103I ATGCAT 3 cut(s) 653, 1006, 1216
MroNI GCCGGC 1 cut(s) 1431
MroXI GAANNNNTTC 1 cut(s) 71
MseI TTAA 7 cut(s) 402, 462, 789, 890, 1407, 1524, 1595
MslI CAYNNNNRTG 2 cut(s) 1400, 1797
MspA1I CMGCKG 1 cut(s) 1496
MspI CCGG 4 cut(s) 318, 431, 1380, 1432
MspR9I CCNGG 2 cut(s) 319, 1381
MunI CAATTG 1 cut(s) 768
Mva1269I GAATGC 1 cut(s) 651
MvnI CGCG 3 cut(s) 234, 945, 1244
MwoI GCNNNNNNNGC 3 cut(s) 1094, 1250, 1441
NaeI GCCGGC 1 cut(s) 1433
NciI CCSGG 2 cut(s) 319, 1381
NdeI CATATG 5 cut(s) 446, 977, 1216, 1302, 1489
NdeII GATC 5 cut(s) 128, 314, 831, 853, 1753
NgoMIV GCCGGC 1 cut(s) 1431
NlaIII CATG 5 cut(s) 91, 1171, 1207, 1238, 1617
NlaIV GGNNCC 2 cut(s) 296, 316
NmeAIII GCCGAG 1 cut(s) 323
NmuCI GTSAC 1 cut(s) 1609
NsbI TGCGCA 1 cut(s) 743
NsiI ATGCAT 3 cut(s) 653, 1006, 1216
OliI CACNNNNGTG 1 cut(s) 1400
PceI AGGCCT 1 cut(s) 689
PciSI GCTCTTC 3 cut(s) 77, 1557, 1574
PctI GAATGC 1 cut(s) 651
PdiI GCCGGC 1 cut(s) 1433
PdmI GAANNNNTTC 1 cut(s) 71
PfeI GAWTC 4 cut(s) 367, 500, 617, 1376
PflMI CCANNNNNTGG 1 cut(s) 1712
PkrI GCNGC 7 cut(s) 140, 187, 1053, 1141, 1164, 1252, 1495
PshBI ATTAAT 2 cut(s) 462, 789
PsiI TTATAA 1 cut(s) 683
Psp124BI GAGCTC 2 cut(s) 542, 1569
PspFI CCCAGC 1 cut(s) 1331
PspN4I GGNNCC 2 cut(s) 296, 316
PspPI GGNCC 2 cut(s) 928, 1484
PstI CTGCAG 1 cut(s) 1144
PstNI CAGNNNCTG 1 cut(s) 370
PsuI RGATCY 2 cut(s) 314, 831
PvuII CAGCTG 1 cut(s) 1496
RsaI GTAC 3 cut(s) 381, 1507, 1728
RsaNI GTAC 3 cut(s) 380, 1506, 1727
RseI CAYNNNNRTG 2 cut(s) 1400, 1797
SacI GAGCTC 2 cut(s) 542, 1569
SapI GCTCTTC 3 cut(s) 77, 1557, 1574
SaqAI TTAA 7 cut(s) 402, 462, 789, 890, 1407, 1524, 1595
SatI GCNGC 7 cut(s) 139, 186, 1052, 1140, 1163, 1251, 1494
Sau3AI GATC 5 cut(s) 128, 314, 831, 853, 1753
Sau96I GGNCC 2 cut(s) 928, 1484
ScaI AGTACT 1 cut(s) 1728
ScrFI CCNGG 2 cut(s) 319, 1381
SduI GDGCHC 3 cut(s) 353, 542, 1569
SfaNI GCATC 7 cut(s) 638, 769, 1149, 1201, 1359, 1652, 1681
SfcI CTRYAG 1 cut(s) 1140
SinI GGWCC 1 cut(s) 1484
SmiMI CAYNNNNRTG 2 cut(s) 1400, 1797
SmlI CTYRAG 2 cut(s) 1070, 1744
SmoI CTYRAG 2 cut(s) 1070, 1744
SseBI AGGCCT 1 cut(s) 689
SsiI CCGC 3 cut(s) 234, 943, 1694
SspMI CTAG 8 cut(s) 270, 578, 710, 1011, 1344, 1391, 1436, 1641
SstI GAGCTC 2 cut(s) 542, 1569
StuI AGGCCT 1 cut(s) 689
StyD4I CCNGG 2 cut(s) 317, 1379
TaaI ACNGT 5 cut(s) 97, 939, 1115, 1412, 1810
TaiI ACGT 1 cut(s) 58
TaqI TCGA 3 cut(s) 646, 1117, 1551
TatI WGTACW 3 cut(s) 379, 1505, 1726
TfiI GAWTC 4 cut(s) 367, 500, 617, 1376
Tru1I TTAA 7 cut(s) 402, 462, 789, 890, 1407, 1524, 1595
Tru9I TTAA 7 cut(s) 402, 462, 789, 890, 1407, 1524, 1595
TscAI CASTG 3 cut(s) 348, 361, 1479
TseFI GTSAC 1 cut(s) 1609
TseI GCWGC 7 cut(s) 138, 185, 1051, 1139, 1162, 1250, 1493
Tsp45I GTSAC 1 cut(s) 1609
TspDTI ATGAA 6 cut(s) 76, 112, 860, 1182, 1251, 1280
TspRI CASTG 3 cut(s) 348, 361, 1479
Van91I CCANNNNNTGG 1 cut(s) 1712
VpaK11BI GGWCC 1 cut(s) 1484
VspI ATTAAT 2 cut(s) 462, 789
XapI RAATTY 4 cut(s) 239, 333, 1146, 1671
XmnI GAANNNNTTC 1 cut(s) 71
XspI CTAG 8 cut(s) 270, 578, 710, 1011, 1344, 1391, 1436, 1641
ZrmI AGTACT 1 cut(s) 1728
Zsp2I ATGCAT 3 cut(s) 653, 1006, 1216
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.