RchiOBHm_Chr5g0020151

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0008257
Physical Location & Seq
Reverse (-)
14438840 .. 14442515
3676 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ30026

Sequence Viewer

Length: 1836 bp
ATGTTATCAAGACTATCTTCTTTCTTGCACACTCAAAACCCGCAAAATACCAAACGTCCAAACTGTAAGCTCTTCCTCCATTTCCTCCTCCAAGTATTCATGTTGACTGTTGAGCGCGCCATTAGCTACATTTTCATTGGATCAAGAAGCTGCAAGACTAATTGCAGATGGAAAGCCAAGAGTTCCAATGGTGGAGCTGCTGGAAAGAGCAAGCCTAAGCTTGACACCATCTATATTGACAAACGCGGGAAATTCAGAAGCTTCAACCACAAGAAAGTGTCTAGGAAACGATGTGGTTCTCTAAGGAGCCGAGGATGGAAGTATGGATCCGGGTTTGTTGATGGAATTTTCCCAGTGATGAGCCCCACTGCTGAGCAGATTCTGGACATTGTACAGAACGAAGCGGACAGAATTAAAATATGGGAAGTTCTTGACACTCTTCCGGCCTCTCATATCATATGGGATGACATCATTAATGTAGCTGTTCAACTTCGTCTCAATAAAATGTGGGATTCCATAATCTTGATGTGTGAGTGGATATTGCACAAGAGCTCCTACAAGCCAGATGTAATCTGCTACAATTTACTGCTAGACGCTTATGGGCAGAAATCACTGCATAAAGAGGCAGAATCCACTTATTTGGAACTTCTTGAAGCTCGATGCATTCCCACCGAGGACACTTATGCCCTTCTTATAAAGGCCTACTGCAAGTCTGGATTGCTAGATAGGGCTGAAGCCATTTTTGGTGAAATGCGCAAGTATGGTCTTCCTCCAAGTGCAATTGTGTTTGATGCTTATATTAATGGGTTGATAAAAGGAGGAAACCCTCAAAAAGCAGAAGAGATCTTTCAGAGGATGAAAAGAGATCAATGCGAACCATCTGCCGACACTTATACTATGTTAATCAATATATATGGGAAGGCAAGAAAATCCTATATGGCCCTAAAACTGTTCCGCGAAATGAGAAGTCAGAAATGTAAACCGAACATATGCACATATACTGCTTTGATAAATTCATTTGCTAGGGAAGGAAATTGTGAGAAAGCAGAAGAGATATTTGAGCAGCTACAAGAGGCAGGGCTAGAGCCTGATGTGTATGCTTACAATGCCCTTATGGAAGCTTACAGTCGAGCAGGATACCCTTATGGAGCTGCAGAAATTTTCTCTTTGATGCAGCACATGGGATGTGAACCAGATAGAGCTTCATATAATATCATGGTAGATGCATATGGTAGAGGGGGTCTGCATGAAGACGCGCAAGCTGCGTTTGAAGAGATGAAGCGATTAGGAATAACCCCAACAATCAAATCCCATATGCTACTTTTATCTGCCTACTCCAAAGCTGGGAATGTAGCTAGATGTGAAGACATTGTGAACCAGATGCGAGAATCCGGGCTGGAGCTAGACACATTTGTGATTAACAGTATGCTAAACCTGTATGGCCGGCTAGGTCAGCTAGAAAAAATGGAGGAAGTTTTGACTGCACTGGAAAAAGGACCATATGCAGCTGATATCAGTACATATAACATCTTGATTAACATATATGGAAGGGCAGGATTTTTCGACAAGATGGAAGAGCTCTTCCAATCACTTCCAGCAAAGAAATTAAAACCTGATGTTGTGACATGGACTTCTCGTCTTGGAGCATACTCTAGGAAGAAACTATACACAAGATGCGTGGAAATTTTTGAAGAAATGATTGATGCGGGTTGCTATCCAGATGGCGGAACTGCCAAAGTACTTCTTGCTTCCTGCTCAAGCGAAGATCAAACCAAGCAGGTCAGTGTTGTTATTAGAACAATGCACAAGGATGTCAGGACTGTCTTACCTATCTGA

Protein Analysis

611

Amino Acids

69.32

Weight (kDa)

8.68

Isoelectric Point (pI)

39.75

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 188 - 237 1.6e-09 PPR repeat family
PPR_1 PF12854 221 - 252 6e-08 PPR repeat
PPR PF01535 227 - 256 3.8e-07 PPR repeat
PPR_2 PF13041 227 - 272 1.4e-07 PPR repeat family
PPR_3 PF13812 247 - 307 2e-10 Pentatricopeptide repeat domain
PPR_2 PF13041 258 - 304 7.2e-10 PPR repeat family
PPR_long PF17177 278 - 379 6.4e-12 Pentacotripeptide-repeat region of PRORP
PPR_2 PF13041 297 - 342 2.9e-12 PPR repeat family
PPR PF01535 297 - 326 5.7e-06 PPR repeat
PPR_3 PF13812 308 - 340 3.4e-06 Pentatricopeptide repeat domain
PPR_3 PF13812 316 - 375 1.5e-14 Pentatricopeptide repeat domain
PPR_1 PF12854 326 - 355 2.5e-08 PPR repeat
PPR_2 PF13041 328 - 376 3.7e-12 PPR repeat family
PPR PF01535 332 - 361 2.8e-07 PPR repeat
TPR_24 PF23276 336 - 408 1.5e-06 Fungal tetratrico peptide repeats
PPR_3 PF13812 352 - 411 6.9e-12 Pentatricopeptide repeat domain
PPR_2 PF13041 363 - 410 8.3e-12 PPR repeat family
TPR_24 PF23276 377 - 489 7.8e-07 Fungal tetratrico peptide repeats
PPR_long PF17177 384 - 499 2.8e-08 Pentacotripeptide-repeat region of PRORP
PPR_1 PF12854 394 - 427 8.1e-07 PPR repeat
PPR PF01535 402 - 431 4e-07 PPR repeat
PPR_2 PF13041 402 - 437 9.6e-06 PPR repeat family
PPR_2 PF13041 504 - 545 3.6e-07 PPR repeat family
PPR_2 PF13041 538 - 585 5.9e-07 PPR repeat family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 695
Acc16I TGCGCA 1 cut(s) 755
Acc36I ACCTGC 1 cut(s) 1768
AccII CGCG 4 cut(s) 117, 246, 957, 1256
AciI CCGC 6 cut(s) 41, 246, 404, 955, 1706, 1725
AclWI GGATC 3 cut(s) 148, 321, 334
AcoI YGGCCR 1 cut(s) 1441
AcsI RAATTY 5 cut(s) 251, 345, 1012, 1158, 1683
AcuI CTGAAG 1 cut(s) 753
AfaI GTAC 3 cut(s) 393, 1519, 1740
AfiI CCNNNNNNNGG 2 cut(s) 1344, 1724
AgsI TTSAA 5 cut(s) 265, 488, 653, 1271, 1691
AhdI GACNNNNNGTC 1 cut(s) 1635
AjuI GAANNNNNNNTTGG 2 cut(s) 726, 758
AleI CACNNNNGTG 1 cut(s) 1412
Alw21I GWGCWC 2 cut(s) 554, 1581
Alw26I GTCTC 1 cut(s) 500
AlwI GGATC 3 cut(s) 148, 321, 334
AlwNI CAGNNNCTG 1 cut(s) 382
AoxI GGCC 4 cut(s) 444, 699, 939, 1441
ApeKI GCWGC 7 cut(s) 150, 197, 1063, 1151, 1174, 1262, 1505
ApoI RAATTY 5 cut(s) 251, 345, 1012, 1158, 1683
AseI ATTAAT 2 cut(s) 474, 801
AspLEI GCGC 4 cut(s) 117, 119, 756, 1258
AspS9I GGNCC 2 cut(s) 940, 1496
AsuC2I CCSGG 2 cut(s) 331, 1393
AsuHPI GGTGA 1 cut(s) 758
AvaII GGWCC 1 cut(s) 1496
BamHI GGATCC 1 cut(s) 326
BanII GRGCYC 3 cut(s) 365, 554, 1581
BarI GAAGNNNNNNTAC 2 cut(s) 1649, 1681
BbsI GAAGAC 3 cut(s) 758, 1257, 1371
Bbv12I GWGCWC 2 cut(s) 554, 1581
BbvI GCAGC 7 cut(s) 137, 184, 1075, 1138, 1186, 1249, 1517
BccI CCATC 7 cut(s) 162, 236, 309, 335, 886, 1564, 1715
BcgI CGANNNNNNTGC 2 cut(s) 863, 897
BciVI GTATCC 1 cut(s) 1130
BcnI CCSGG 2 cut(s) 331, 1393
BcoDI GTCTC 1 cut(s) 500
BfmI CTRYAG 1 cut(s) 1152
BfuAI ACCTGC 1 cut(s) 1768
BfuI GTATCC 1 cut(s) 1130
BglII AGATCT 1 cut(s) 843
BisI GCNGC 7 cut(s) 151, 198, 1064, 1152, 1175, 1263, 1506
BlpI GCTNAGC 1 cut(s) 372
BlsI GCNGC 7 cut(s) 152, 199, 1065, 1153, 1176, 1264, 1507
BmcAI AGTACT 1 cut(s) 1740
Bme1390I CCNGG 2 cut(s) 331, 1393
Bme18I GGWCC 1 cut(s) 1496
BmeRI GACNNNNNGTC 1 cut(s) 1635
BmgT120I GGNCC 2 cut(s) 940, 1496
BmiI GGNNCC 2 cut(s) 308, 328
BmrFI CCNGG 2 cut(s) 331, 1393
BmrI ACTGGG 1 cut(s) 347
BmsI GCATC 7 cut(s) 650, 781, 1161, 1213, 1371, 1664, 1693
BmuI ACTGGG 1 cut(s) 347
BpiI GAAGAC 3 cut(s) 758, 1257, 1371
BpmI CTGGAG 1 cut(s) 1418
Bpu10I CCTNAGC 1 cut(s) 216
Bpu1102I GCTNAGC 1 cut(s) 372
BpuEI CTTGAG 1 cut(s) 1741
BpuMI CCSGG 2 cut(s) 331, 1393
BsaJI CCNNGG 2 cut(s) 310, 672
BsaXI ACNNNNNCTCC 2 cut(s) 536, 566
Bsc4I CCNNNNNNNGG 2 cut(s) 1344, 1724
Bse118I RCCGGY 1 cut(s) 1443
Bse1I ACTGG 2 cut(s) 353, 1491
BseDI CCNNGG 2 cut(s) 310, 672
BseGI GGATG 5 cut(s) 320, 469, 861, 1190, 1816
BseLI CCNNNNNNNGG 2 cut(s) 1344, 1724
BseMII CTCAG 1 cut(s) 363
BseNI ACTGG 2 cut(s) 353, 1491
BsePI GCGCGC 1 cut(s) 115
BseRI GAGGAG 1 cut(s) 77
BseXI GCAGC 7 cut(s) 137, 184, 1075, 1138, 1186, 1249, 1517
BseYI CCCAGC 1 cut(s) 1343
BsgI GTGCAG 1 cut(s) 1467
Bsh1236I CGCG 4 cut(s) 117, 246, 957, 1256
BshFI GGCC 4 cut(s) 446, 701, 941, 1443
BsiHKAI GWGCWC 2 cut(s) 554, 1581
BsiSI CCGG 4 cut(s) 330, 443, 1392, 1444
BslI CCNNNNNNNGG 2 cut(s) 1344, 1724
BsmAI GTCTC 1 cut(s) 500
BsmBI CGTCTC 1 cut(s) 500
BsmI GAATGC 1 cut(s) 663
BsnI GGCC 4 cut(s) 446, 701, 941, 1443
Bsp1286I GDGCHC 3 cut(s) 365, 554, 1581
Bsp1407I TGTACA 1 cut(s) 391
Bsp143I GATC 5 cut(s) 140, 326, 843, 865, 1765
Bsp1720I GCTNAGC 1 cut(s) 372
BspACI CCGC 6 cut(s) 41, 246, 404, 955, 1706, 1725
BspANI GGCC 4 cut(s) 446, 701, 941, 1443
BspCNI CTCAG 1 cut(s) 364
BspFNI CGCG 4 cut(s) 117, 246, 957, 1256
BspLI GGNNCC 2 cut(s) 308, 328
BspMAI CTGCAG 1 cut(s) 1156
BspMI ACCTGC 1 cut(s) 1768
BspPI GGATC 3 cut(s) 148, 321, 334
BspQI GCTCTTC 3 cut(s) 77, 1569, 1586
BsrFI RCCGGY 1 cut(s) 1443
BsrGI TGTACA 1 cut(s) 391
BsrI ACTGG 2 cut(s) 353, 1491
BssAI RCCGGY 1 cut(s) 1443
BssECI CCNNGG 2 cut(s) 310, 672
BssHII GCGCGC 1 cut(s) 115
BssMI GATC 5 cut(s) 140, 326, 843, 865, 1765
Bst4CI ACNGT 6 cut(s) 65, 109, 951, 1127, 1424, 1822
Bst6I CTCTTC 7 cut(s) 77, 444, 834, 1044, 1266, 1569, 1586
BstAUI TGTACA 1 cut(s) 391
BstC8I GCNNGC 4 cut(s) 117, 212, 1260, 1445
BstDEI CTNAG 3 cut(s) 216, 302, 372
BstF5I GGATG 5 cut(s) 320, 469, 861, 1190, 1816
BstFNI CGCG 4 cut(s) 117, 246, 957, 1256
BstHHI GCGC 4 cut(s) 117, 119, 756, 1258
BstKTI GATC 5 cut(s) 143, 329, 846, 868, 1768
BstMAI GTCTC 1 cut(s) 500
BstMBI GATC 5 cut(s) 140, 326, 843, 865, 1765
BstMWI GCNNNNNNNGC 4 cut(s) 123, 1106, 1262, 1453
BstSCI CCNGG 2 cut(s) 329, 1391
BstSFI CTRYAG 1 cut(s) 1152
BstUI CGCG 4 cut(s) 117, 246, 957, 1256
BstV1I GCAGC 7 cut(s) 137, 184, 1075, 1138, 1186, 1249, 1517
BstV2I GAAGAC 3 cut(s) 758, 1257, 1371
BstX2I RGATCY 2 cut(s) 326, 843
BstXI CCANNNNNNTGG 1 cut(s) 640
BstYI RGATCY 2 cut(s) 326, 843
BsuI GTATCC 1 cut(s) 1130
BsuRI GGCC 4 cut(s) 446, 701, 941, 1443
BtsCI GGATG 5 cut(s) 320, 469, 861, 1190, 1816
BtsI GCAGTG 2 cut(s) 366, 611
BtsIMutI CAGTG 5 cut(s) 360, 366, 611, 1484, 1789
BveI ACCTGC 1 cut(s) 1768
Cac8I GCNNGC 4 cut(s) 117, 212, 1260, 1445
CaiI CAGNNNCTG 1 cut(s) 382
CfoI GCGC 4 cut(s) 117, 119, 756, 1258
Cfr10I RCCGGY 1 cut(s) 1443
Cfr13I GGNCC 2 cut(s) 940, 1496
CseI GACGC 2 cut(s) 602, 1262
Csp6I GTAC 3 cut(s) 392, 1518, 1739
CspCI CAANNNNNGTGG 2 cut(s) 1659, 1694
CviAII CATG 5 cut(s) 100, 1180, 1216, 1247, 1626
CviQI GTAC 3 cut(s) 392, 1518, 1739
DdeI CTNAG 3 cut(s) 216, 302, 372
DpnI GATC 5 cut(s) 142, 328, 845, 867, 1767
DpnII GATC 5 cut(s) 140, 326, 843, 865, 1765
DriI GACNNNNNGTC 1 cut(s) 1635
EaeI YGGCCR 1 cut(s) 1441
Eam1104I CTCTTC 7 cut(s) 77, 444, 834, 1044, 1266, 1569, 1586
Eam1105I GACNNNNNGTC 1 cut(s) 1635
EarI CTCTTC 7 cut(s) 77, 444, 834, 1044, 1266, 1569, 1586
EciI GGCGGA 1 cut(s) 1740
Ecl136II GAGCTC 2 cut(s) 552, 1579
Eco147I AGGCCT 1 cut(s) 701
Eco24I GRGCYC 3 cut(s) 365, 554, 1581
Eco32I GATATC 1 cut(s) 1513
Eco47I GGWCC 1 cut(s) 1496
Eco53kI GAGCTC 2 cut(s) 552, 1579
Eco57I CTGAAG 1 cut(s) 753
EcoICRI GAGCTC 2 cut(s) 552, 1579
EcoRV GATATC 1 cut(s) 1513
EcoT22I ATGCAT 2 cut(s) 665, 1228
EcoT38I GRGCYC 3 cut(s) 365, 554, 1581
Esp3I CGTCTC 1 cut(s) 500
FaeI CATG 5 cut(s) 103, 1183, 1219, 1250, 1629
FalI AAGNNNNNCTT 3 cut(s) 33, 1728, 1760
FatI CATG 5 cut(s) 99, 1179, 1215, 1246, 1625
FauI CCCGC 3 cut(s) 48, 239, 1699
FauNDI CATATG 5 cut(s) 458, 989, 1228, 1314, 1501
Fnu4HI GCNGC 7 cut(s) 151, 198, 1064, 1152, 1175, 1263, 1506
FokI GGATG 5 cut(s) 327, 476, 868, 1197, 1823
FriOI GRGCYC 3 cut(s) 365, 554, 1581
Fsp4HI GCNGC 7 cut(s) 151, 198, 1064, 1152, 1175, 1263, 1506
FspI TGCGCA 1 cut(s) 755
GlaI GCGC 4 cut(s) 116, 118, 755, 1257
GluI GCNGC 7 cut(s) 151, 198, 1064, 1152, 1175, 1263, 1506
GsaI CCCAGC 1 cut(s) 1347
GsuI CTGGAG 1 cut(s) 1418
HaeIII GGCC 4 cut(s) 446, 701, 941, 1443
HapII CCGG 4 cut(s) 330, 443, 1392, 1444
HgaI GACGC 2 cut(s) 602, 1262
HhaI GCGC 4 cut(s) 117, 119, 756, 1258
Hin1II CATG 5 cut(s) 103, 1183, 1219, 1250, 1629
Hin6I GCGC 4 cut(s) 115, 117, 754, 1256
HinP1I GCGC 4 cut(s) 115, 117, 754, 1256
HincII GTYRAC 1 cut(s) 105
HindII GTYRAC 1 cut(s) 105
HindIII AAGCTT 3 cut(s) 218, 259, 1119
HinfI GANTC 4 cut(s) 379, 512, 629, 1388
HpaII CCGG 4 cut(s) 330, 443, 1392, 1444
HphI GGTGA 1 cut(s) 758
Hpy166II GTNNAC 4 cut(s) 105, 980, 1190, 1375
Hpy188I TCNGA 4 cut(s) 257, 852, 972, 1835
Hpy8I GTNNAC 4 cut(s) 105, 980, 1190, 1375
HpyAV CCTTC 4 cut(s) 698, 913, 1022, 1542
HpyCH4III ACNGT 6 cut(s) 65, 109, 951, 1127, 1424, 1822
HpyCH4IV ACGT 1 cut(s) 55
HpyF10VI GCNNNNNNNGC 4 cut(s) 123, 1106, 1262, 1453
HpyF3I CTNAG 3 cut(s) 216, 302, 372
HpySE526I ACGT 1 cut(s) 55
Hsp92II CATG 5 cut(s) 103, 1183, 1219, 1250, 1629
HspAI GCGC 4 cut(s) 115, 117, 754, 1256
KroI GCCGGC 1 cut(s) 1443
KroNI GCCGGC 1 cut(s) 1445
Kzo9I GATC 5 cut(s) 140, 326, 843, 865, 1765
LguI GCTCTTC 3 cut(s) 77, 1569, 1586
LmnI GCTCC 6 cut(s) 194, 306, 557, 1148, 1399, 1643
Lsp1109I GCAGC 7 cut(s) 137, 184, 1075, 1138, 1186, 1249, 1517
LweI GCATC 7 cut(s) 650, 781, 1161, 1213, 1371, 1664, 1693
MaeII ACGT 1 cut(s) 55
MaeIII GTNAC 1 cut(s) 1621
MalI GATC 5 cut(s) 142, 328, 845, 867, 1767
MboI GATC 5 cut(s) 140, 326, 843, 865, 1765
MfeI CAATTG 1 cut(s) 780
MflI RGATCY 2 cut(s) 326, 843
MhlI GDGCHC 3 cut(s) 365, 554, 1581
Mph1103I ATGCAT 2 cut(s) 665, 1228
MroNI GCCGGC 1 cut(s) 1443
MseI TTAA 7 cut(s) 414, 474, 801, 902, 1419, 1536, 1607
MslI CAYNNNNRTG 2 cut(s) 1412, 1809
MspA1I CMGCKG 1 cut(s) 1508
MspI CCGG 4 cut(s) 330, 443, 1392, 1444
MspR9I CCNGG 2 cut(s) 331, 1393
MunI CAATTG 1 cut(s) 780
Mva1269I GAATGC 1 cut(s) 663
MvnI CGCG 4 cut(s) 117, 246, 957, 1256
MwoI GCNNNNNNNGC 4 cut(s) 123, 1106, 1262, 1453
NaeI GCCGGC 1 cut(s) 1445
NciI CCSGG 2 cut(s) 331, 1393
NdeI CATATG 5 cut(s) 458, 989, 1228, 1314, 1501
NdeII GATC 5 cut(s) 140, 326, 843, 865, 1765
NgoMIV GCCGGC 1 cut(s) 1443
NlaIII CATG 5 cut(s) 103, 1183, 1219, 1250, 1629
NlaIV GGNNCC 2 cut(s) 308, 328
NmeAIII GCCGAG 1 cut(s) 335
NmuCI GTSAC 1 cut(s) 1621
NsbI TGCGCA 1 cut(s) 755
NsiI ATGCAT 2 cut(s) 665, 1228
OliI CACNNNNGTG 1 cut(s) 1412
PauI GCGCGC 1 cut(s) 115
PceI AGGCCT 1 cut(s) 701
PciSI GCTCTTC 3 cut(s) 77, 1569, 1586
PctI GAATGC 1 cut(s) 663
PdiI GCCGGC 1 cut(s) 1445
PfeI GAWTC 4 cut(s) 379, 512, 629, 1388
PkrI GCNGC 7 cut(s) 152, 199, 1065, 1153, 1176, 1264, 1507
PshBI ATTAAT 2 cut(s) 474, 801
PsiI TTATAA 1 cut(s) 695
Psp124BI GAGCTC 2 cut(s) 554, 1581
PspFI CCCAGC 1 cut(s) 1343
PspN4I GGNNCC 2 cut(s) 308, 328
PspPI GGNCC 2 cut(s) 940, 1496
PstI CTGCAG 1 cut(s) 1156
PstNI CAGNNNCTG 1 cut(s) 382
PsuI RGATCY 2 cut(s) 326, 843
PteI GCGCGC 1 cut(s) 115
PvuII CAGCTG 1 cut(s) 1508
RsaI GTAC 3 cut(s) 393, 1519, 1740
RsaNI GTAC 3 cut(s) 392, 1518, 1739
RseI CAYNNNNRTG 2 cut(s) 1412, 1809
SacI GAGCTC 2 cut(s) 554, 1581
SapI GCTCTTC 3 cut(s) 77, 1569, 1586
SaqAI TTAA 7 cut(s) 414, 474, 801, 902, 1419, 1536, 1607
SatI GCNGC 7 cut(s) 151, 198, 1064, 1152, 1175, 1263, 1506
Sau3AI GATC 5 cut(s) 140, 326, 843, 865, 1765
Sau96I GGNCC 2 cut(s) 940, 1496
ScaI AGTACT 1 cut(s) 1740
ScrFI CCNGG 2 cut(s) 331, 1393
SduI GDGCHC 3 cut(s) 365, 554, 1581
SfaNI GCATC 7 cut(s) 650, 781, 1161, 1213, 1371, 1664, 1693
SfcI CTRYAG 1 cut(s) 1152
SinI GGWCC 1 cut(s) 1496
SmiMI CAYNNNNRTG 2 cut(s) 1412, 1809
SmlI CTYRAG 1 cut(s) 1756
SmoI CTYRAG 1 cut(s) 1756
SseBI AGGCCT 1 cut(s) 701
SsiI CCGC 6 cut(s) 41, 246, 404, 955, 1706, 1725
SstI GAGCTC 2 cut(s) 554, 1581
StuI AGGCCT 1 cut(s) 701
StyD4I CCNGG 2 cut(s) 329, 1391
TaaI ACNGT 6 cut(s) 65, 109, 951, 1127, 1424, 1822
TaiI ACGT 1 cut(s) 58
TaqI TCGA 3 cut(s) 658, 1129, 1563
TatI WGTACW 3 cut(s) 391, 1517, 1738
TfiI GAWTC 4 cut(s) 379, 512, 629, 1388
Tru1I TTAA 7 cut(s) 414, 474, 801, 902, 1419, 1536, 1607
Tru9I TTAA 7 cut(s) 414, 474, 801, 902, 1419, 1536, 1607
TscAI CASTG 5 cut(s) 360, 373, 618, 1491, 1789
TseFI GTSAC 1 cut(s) 1621
TseI GCWGC 7 cut(s) 150, 197, 1063, 1151, 1174, 1262, 1505
Tsp45I GTSAC 1 cut(s) 1621
TspDTI ATGAA 7 cut(s) 88, 124, 872, 1005, 1194, 1263, 1292
TspRI CASTG 5 cut(s) 360, 373, 618, 1491, 1789
VpaK11BI GGWCC 1 cut(s) 1496
VspI ATTAAT 2 cut(s) 474, 801
XapI RAATTY 5 cut(s) 251, 345, 1012, 1158, 1683
ZrmI AGTACT 1 cut(s) 1740
Zsp2I ATGCAT 2 cut(s) 665, 1228
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.