Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0005002

Physical Location & Seq

Genomic Coordinates Forward (+)

5042000 .. 5047421

Gene Structure 5422 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0057400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1518 bp

ATGGAGGCGCTGCTATTGAGGCTCTTACCTCTGCTAACACTACTCCTTTCTTTCCTAGTGTTCTTCTATTTCCAAGACTCATCCACGCTAAATCAGAAGCAATGCAGCCTGCTTCCTTACCAACACTATTGGATAGCAAGCAAGCGCATTGTGACACCTCAAGGGGTCATTTCTGGACTAGTTGAGGTGAAGGAGGGGAAGATTGCCTCCGTTGTTAAAGAAGAGGATGAGGATGGGAAAACCAAGTTGGAGAATGTAATTGATTATGGAGAGGCTGTTGTCATGCCTGGCTTGATTGATGTGCATGCACATCTTGATGATCCTGGACGAAGTGAGTGGGAAGGATTTCCATCAGGGACTAAAGCTGCTGCTGCTGGTGGTATAACAACCTTGGTTGACATGCCTCTAAATAGCTTTCCTTCCACAGTCTCTAGAGAGACTTTAGAGCTCAAGCTTAAGGCTGCGGAAAGCAGAATTTATGTTGATGTTGGTTTCTGGGGAGGCCTTGTCCCTGAAAATGCATTCAACAAATCTGCCCTTGAGGATCTCTTAAATGCCGGTGCTCTTGGTTTGAAGTCTTTCATGTGTCCATCAGGGATCAATGACTTTCCTATGACAAACAGCAGTCATATTAAGGAGGGTCTGTCTGTACTGGCAAAATATCGAAGGCCTTTACTTGTACATGCAGAGAAACAACTAGATCCTGAAGCTAACTTGGGAGTCGAAGATGGTAGTAATGATGCTCGTTCCTATTCGACGTATCTTAAGACTAGGCCACCTTCATGGGAAGAGGCAGCTATAAAGGATCTCGTTACCTTGACAAAGGACACAAGGATCGGTGCTCCTGCAGAAGGAGCTCATCTTCATATTGTGCACTTGTCTGACTCAAGCTCTTCATTAGATCTTATTAAGGAAGCAAAAAGTCGTGGCGACAGTTTAACTGTTGAGACGTGCCCCCACTACTTAGCTTTCTCAGCTGAAGAGATTCGGGATGGAGATACTCGTTTTAAGTGTTCTCCACCCATCCGTGATGCTGTCAATAAGGAAAAACTGTGGAACGCTTTGTTGGAAGGGGATCTTGACATGTTAAGCTCTGATCATTCTCCAACAACACCCGAACTTAAGCGTCTGGATGATGGTGACTTTTTAAAGGCTTGGGGTGGCATATCGTGCTTGCAGTTTGTTCTTCCTGTGACATGGTCGTATGGCCAGAAATATGGAGTAACTTTAGAACAAATGGCTCTGTGGTGGAGTGAAAGGCCGGCCAAGCTTGCTGGACAAAAACTAAAGGGGGCAATTGCAATCGGAAATTATGCAGATATTGTAGTATGGAATCCAGATGTTGAATTTGACCTTGACGATGACCATCCAGTATACATTAAGCATCCGGGTAATTCAGCCTACATGGGAACAAAGTTATCTGGAAAAGTCTCAGCTACTTTTCTTAGAGGAAACCTTGTCTTCAAAGAAGGGAATCATGCTCCTGCAGCCTGTGGTGTTCCGATTCTGGCAAAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464

KEGG Pathways

Metabolic & Signaling

ko00260 ko00630 ko01100 ko01110 ko01130 ko01200 map00260 map00630 map01100 map01110 map01130 map01200

Pfam Domains

Protein Families

GCV_H

Protein Analysis

505

Amino Acids

55.34

Weight (kDa)

5.34

Isoelectric Point (pI)

39.14

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ALN_composite	PF24890	38 - 92	6.7e-30	Allantoinase, composite domain
Amidohydro_1	PF01979	93 - 487	4.2e-24	Amidohydrolase family
DHOase	PF12890	93 - 294	5.8e-09	Dihydro-orotase-like

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005002)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G35120
fragaria_vesca	FvH4_3g12351 FvH4_6g39570
malus_domestica	MD05G1251000.v1.1 MD09G1138700.v1.1 MD10G1231600.v1.1
prunus_persica	Prupe.3G186700_v2.0.a1 Prupe.4G112700_v2.0.a1
pyrus_communis	pycom05g22890 pycom10g19490
rosa_chinensis	RchiOBHm_Chr2g0153611 RchiOBHm_Chr5g0020141
rosa_laevigata	RLG00000020714 RLG00000032504
rosa_multiflora	Rmu_sc0000116.1_g000004 Rmu_ssc0000024.1_g000014
rosa_roxburghii	Rroxscaffold_1G00058060 Rroxscaffold_2G00094870
rosa_rugosa	Rorug02G0440900 Rorug05G0057400
rosa_samantha	Rh2AG503800 Rh2BG514500 Rh2CG489500 Rh2DG526300 Rh5AG147500 Rh5BG147100 Rh5CG158500 Rh5DG146400
rosa_wichuraiana	Rw2G041380 Rw5G013040

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	1 cut(s)	1374
AciI	CCGC	1 cut(s)	464
AclWI	GGATC	7 cut(s)	314, 552, 605, 695, 813, 842, 1083
AcoI	YGGCCR	2 cut(s)	1207, 1263
AcsI	RAATTY	2 cut(s)	474, 1346
AcuI	CTGAAG	2 cut(s)	726, 999
AfaI	GTAC	2 cut(s)	651, 681
AfiI	CCNNNNNNNGG	1 cut(s)	851
AflII	CTTAAG	3 cut(s)	455, 764, 1121
AflIII	ACRYGT	1 cut(s)	1083
AgsI	TTSAA	4 cut(s)	526, 574, 1346, 1465
AhlI	ACTAGT	1 cut(s)	178
AjiI	CACGTC	1 cut(s)	951
AjnI	CCWGG	2 cut(s)	286, 322
AjuI	GAANNNNNNNTTGG	4 cut(s)	230, 262, 1049, 1081
Alw21I	GWGCWC	5 cut(s)	450, 565, 844, 859, 876
Alw26I	GTCTC	4 cut(s)	431, 433, 941, 1435
Alw44I	GTGCAC	1 cut(s)	872
AlwI	GGATC	7 cut(s)	314, 552, 605, 695, 813, 842, 1083
AoxI	GGCC	6 cut(s)	502, 668, 773, 1207, 1259, 1263
ApaLI	GTGCAC	1 cut(s)	872
ApeKI	GCWGC	8 cut(s)	10, 105, 365, 368, 371, 461, 794, 1487
ApoI	RAATTY	2 cut(s)	474, 1346
Asp700I	GAANNNNTTC	3 cut(s)	345, 578, 984
AspLEI	GCGC	2 cut(s)	10, 147
AsuC2I	CCSGG	1 cut(s)	1389
AsuHPI	GGTGA	2 cut(s)	199, 1151
BaeGI	GKGCMC	2 cut(s)	876, 956
BalI	TGGCCA	1 cut(s)	1209
BanII	GRGCYC	2 cut(s)	450, 859
BbsI	GAAGAC	1 cut(s)	1453
Bbv12I	GWGCWC	5 cut(s)	450, 565, 844, 859, 876
BbvI	GCAGC	7 cut(s)	117, 352, 355, 358, 448, 806, 1499
BccI	CCATC	8 cut(s)	227, 358, 598, 722, 986, 1031, 1130, 1374
BciT130I	CCWGG	2 cut(s)	288, 324
BclI	TGATCA	1 cut(s)	1096
BcnI	CCSGG	1 cut(s)	1389
BcoDI	GTCTC	4 cut(s)	431, 433, 941, 1435
BcuI	ACTAGT	1 cut(s)	178
BfaI	CTAG	5 cut(s)	56, 179, 432, 698, 771
BfmI	CTRYAG	2 cut(s)	846, 1485
BfoI	RGCGCY	1 cut(s)	11
BfrI	CTTAAG	3 cut(s)	455, 764, 1121
BglII	AGATCT	1 cut(s)	901
BisI	GCNGC	8 cut(s)	11, 106, 366, 369, 372, 462, 795, 1488
BlsI	GCNGC	8 cut(s)	12, 107, 367, 370, 373, 463, 796, 1489
Bme1390I	CCNGG	3 cut(s)	288, 324, 1389
BmgBI	CACGTC	1 cut(s)	951
BmrFI	CCNGG	3 cut(s)	288, 324, 1389
BmsI	GCATC	3 cut(s)	730, 1021, 1393
BpiI	GAAGAC	1 cut(s)	1453
BpuEI	CTTGAG	4 cut(s)	144, 434, 560, 871
BpuMI	CCSGG	1 cut(s)	1389
BsaBI	GATNNNNATC	2 cut(s)	349, 1365
BsaJI	CCNNGG	1 cut(s)	390
BsaXI	ACNNNNNCTCC	6 cut(s)	261, 291, 492, 522, 629, 659
Bsc4I	CCNNNNNNNGG	1 cut(s)	851
Bse118I	RCCGGY	2 cut(s)	557, 1261
Bse1I	ACTGG	2 cut(s)	657, 1370
Bse3DI	GCAATG	1 cut(s)	107
Bse8I	GATNNNNATC	2 cut(s)	349, 1365
BseBI	CCWGG	2 cut(s)	288, 324
BseDI	CCNNGG	1 cut(s)	390
BseGI	GGATG	8 cut(s)	80, 232, 238, 997, 1023, 1138, 1366, 1384
BseJI	GATNNNNATC	2 cut(s)	349, 1365
BseLI	CCNNNNNNNGG	1 cut(s)	851
BseMI	GCAATG	1 cut(s)	107
BseMII	CTCAG	2 cut(s)	987, 1446
BseNI	ACTGG	2 cut(s)	657, 1370
BseSI	GKGCMC	2 cut(s)	876, 956
BseXI	GCAGC	7 cut(s)	117, 352, 355, 358, 448, 806, 1499
BshFI	GGCC	6 cut(s)	504, 670, 775, 1209, 1261, 1265
BsiHKAI	GWGCWC	5 cut(s)	450, 565, 844, 859, 876
BsiSI	CCGG	3 cut(s)	558, 1262, 1388
BslFI	GGGAC	2 cut(s)	370, 494
BslI	CCNNNNNNNGG	1 cut(s)	851
BsmAI	GTCTC	4 cut(s)	431, 433, 941, 1435
BsmBI	CGTCTC	1 cut(s)	941
BsmFI	GGGAC	2 cut(s)	370, 494
BsmI	GAATGC	1 cut(s)	521
BsnI	GGCC	6 cut(s)	504, 670, 775, 1209, 1261, 1265
Bsp1286I	GDGCHC	6 cut(s)	450, 565, 844, 859, 876, 956
Bsp1407I	TGTACA	1 cut(s)	679
Bsp143I	GATC	9 cut(s)	319, 544, 597, 700, 805, 834, 901, 1075, 1096
BspACI	CCGC	1 cut(s)	464
BspANI	GGCC	6 cut(s)	504, 670, 775, 1209, 1261, 1265
BspCNI	CTCAG	2 cut(s)	986, 1445
BspMAI	CTGCAG	2 cut(s)	850, 1489
BspPI	GGATC	7 cut(s)	314, 552, 605, 695, 813, 842, 1083
BspQI	GCTCTTC	1 cut(s)	898
BspTI	CTTAAG	3 cut(s)	455, 764, 1121
BsrDI	GCAATG	1 cut(s)	107
BsrFI	RCCGGY	2 cut(s)	557, 1261
BsrGI	TGTACA	1 cut(s)	679
BsrI	ACTGG	2 cut(s)	657, 1370
BssAI	RCCGGY	2 cut(s)	557, 1261
BssECI	CCNNGG	1 cut(s)	390
BssMI	GATC	9 cut(s)	319, 544, 597, 700, 805, 834, 901, 1075, 1096
BssNAI	GTATAC	1 cut(s)	1375
BssT1I	CCWWGG	1 cut(s)	390
Bst1107I	GTATAC	1 cut(s)	1375
Bst2UI	CCWGG	2 cut(s)	288, 324
Bst4CI	ACNGT	4 cut(s)	427, 935, 943, 1053
Bst6I	CTCTTC	4 cut(s)	216, 783, 898, 975
BstAFI	CTTAAG	3 cut(s)	455, 764, 1121
BstAPI	GCANNNNNTGC	1 cut(s)	1170
BstAUI	TGTACA	1 cut(s)	679
BstC8I	GCNNGC	7 cut(s)	110, 139, 143, 306, 1175, 1263, 1272
BstDEI	CTNAG	4 cut(s)	964, 973, 1432, 1445
BstENI	CCTNNNNNAGG	1 cut(s)	849
BstF5I	GGATG	8 cut(s)	80, 232, 238, 997, 1023, 1138, 1366, 1384
BstH2I	RGCGCY	1 cut(s)	11
BstHHI	GCGC	2 cut(s)	10, 147
BstKTI	GATC	9 cut(s)	322, 547, 600, 703, 808, 837, 904, 1078, 1099
BstMAI	GTCTC	4 cut(s)	431, 433, 941, 1435
BstMBI	GATC	9 cut(s)	319, 544, 597, 700, 805, 834, 901, 1075, 1096
BstMWI	GCNNNNNNNGC	8 cut(s)	19, 371, 854, 974, 1170, 1267, 1271, 1487
BstNI	CCWGG	2 cut(s)	288, 324
BstNSI	RCATGY	4 cut(s)	308, 403, 686, 1087
BstSCI	CCNGG	3 cut(s)	286, 322, 1387
BstSFI	CTRYAG	2 cut(s)	846, 1485
BstSLI	GKGCMC	2 cut(s)	876, 956
BstV1I	GCAGC	7 cut(s)	117, 352, 355, 358, 448, 806, 1499
BstV2I	GAAGAC	1 cut(s)	1453
BstX2I	RGATCY	5 cut(s)	544, 700, 805, 901, 1075
BstXI	CCANNNNNNTGG	2 cut(s)	783, 1217
BstYI	RGATCY	5 cut(s)	544, 700, 805, 901, 1075
BstZ17I	GTATAC	1 cut(s)	1375
BsuRI	GGCC	6 cut(s)	504, 670, 775, 1209, 1261, 1265
BtrI	CACGTC	1 cut(s)	951
BtsCI	GGATG	8 cut(s)	80, 232, 238, 997, 1023, 1138, 1366, 1384
Cac8I	GCNNGC	7 cut(s)	110, 139, 143, 306, 1175, 1263, 1272
CfoI	GCGC	2 cut(s)	10, 147
Cfr10I	RCCGGY	2 cut(s)	557, 1261
CseI	GACGC	1 cut(s)	1115
Csp6I	GTAC	2 cut(s)	650, 680
CviQI	GTAC	2 cut(s)	650, 680
DdeI	CTNAG	4 cut(s)	964, 973, 1432, 1445
DpnI	GATC	9 cut(s)	321, 546, 599, 702, 807, 836, 903, 1077, 1098
DpnII	GATC	9 cut(s)	319, 544, 597, 700, 805, 834, 901, 1075, 1096
DraI	TTTAAA	1 cut(s)	1149
EaeI	YGGCCR	2 cut(s)	1207, 1263
Eam1104I	CTCTTC	4 cut(s)	216, 783, 898, 975
EarI	CTCTTC	4 cut(s)	216, 783, 898, 975
Ecl136II	GAGCTC	2 cut(s)	448, 857
Eco130I	CCWWGG	1 cut(s)	390
Eco147I	AGGCCT	2 cut(s)	504, 670
Eco24I	GRGCYC	2 cut(s)	450, 859
Eco53kI	GAGCTC	2 cut(s)	448, 857
Eco57I	CTGAAG	2 cut(s)	726, 999
EcoICRI	GAGCTC	2 cut(s)	448, 857
EcoNI	CCTNNNNNAGG	1 cut(s)	849
EcoRII	CCWGG	2 cut(s)	286, 322
EcoT14I	CCWWGG	1 cut(s)	390
EcoT22I	ATGCAT	1 cut(s)	523
EcoT38I	GRGCYC	2 cut(s)	450, 859
ErhI	CCWWGG	1 cut(s)	390
Esp3I	CGTCTC	1 cut(s)	941
FalI	AAGNNNNNCTT	2 cut(s)	1062, 1094
FaqI	GGGAC	2 cut(s)	370, 494
FbaI	TGATCA	1 cut(s)	1096
FblI	GTMKAC	1 cut(s)	1374
Fnu4HI	GCNGC	8 cut(s)	11, 106, 366, 369, 372, 462, 795, 1488
FokI	GGATG	8 cut(s)	67, 239, 245, 1004, 1010, 1145, 1353, 1371
FriOI	GRGCYC	2 cut(s)	450, 859
FseI	GGCCGGCC	1 cut(s)	1265
Fsp4HI	GCNGC	8 cut(s)	11, 106, 366, 369, 372, 462, 795, 1488
FspBI	CTAG	5 cut(s)	56, 179, 432, 698, 771
GlaI	GCGC	2 cut(s)	9, 146
GluI	GCNGC	8 cut(s)	11, 106, 366, 369, 372, 462, 795, 1488
HaeII	RGCGCY	1 cut(s)	11
HaeIII	GGCC	6 cut(s)	504, 670, 775, 1209, 1261, 1265
HapII	CCGG	3 cut(s)	558, 1262, 1388
HgaI	GACGC	1 cut(s)	1115
HhaI	GCGC	2 cut(s)	10, 147
Hin6I	GCGC	2 cut(s)	8, 145
HinP1I	GCGC	2 cut(s)	8, 145
HincII	GTYRAC	1 cut(s)	397
HindII	GTYRAC	1 cut(s)	397
HindIII	AAGCTT	2 cut(s)	452, 1268
HinfI	GANTC	7 cut(s)	77, 720, 884, 985, 1333, 1474, 1504
HpaII	CCGG	3 cut(s)	558, 1262, 1388
HphI	GGTGA	2 cut(s)	199, 1151
Hpy166II	GTNNAC	3 cut(s)	397, 874, 1375
Hpy188I	TCNGA	5 cut(s)	96, 883, 1096, 1307, 1503
Hpy188III	TCNNGA	9 cut(s)	174, 314, 432, 704, 989, 1079, 1130, 1337, 1422
Hpy8I	GTNNAC	3 cut(s)	397, 874, 1375
Hpy99I	CGWCG	1 cut(s)	760
HpyAV	CCTTC	8 cut(s)	184, 335, 429, 660, 789, 845, 1064, 1463
HpyCH4III	ACNGT	4 cut(s)	427, 935, 943, 1053
HpyCH4IV	ACGT	2 cut(s)	758, 950
HpyF10VI	GCNNNNNNNGC	8 cut(s)	19, 371, 854, 974, 1170, 1267, 1271, 1487
HpyF3I	CTNAG	4 cut(s)	964, 973, 1432, 1445
HpySE526I	ACGT	2 cut(s)	758, 950
HspAI	GCGC	2 cut(s)	8, 145
KroI	GCCGGC	1 cut(s)	1261
KroNI	GCCGGC	1 cut(s)	1263
Ksp22I	TGATCA	1 cut(s)	1096
Kzo9I	GATC	9 cut(s)	319, 544, 597, 700, 805, 834, 901, 1075, 1096
LguI	GCTCTTC	1 cut(s)	898
LmnI	GCTCC	3 cut(s)	847, 854, 1486
Lsp1109I	GCAGC	7 cut(s)	117, 352, 355, 358, 448, 806, 1499
LweI	GCATC	3 cut(s)	730, 1021, 1393
MaeI	CTAG	5 cut(s)	56, 179, 432, 698, 771
MaeII	ACGT	2 cut(s)	758, 950
MaeIII	GTNAC	5 cut(s)	151, 811, 1139, 1192, 1222
MalI	GATC	9 cut(s)	321, 546, 599, 702, 807, 836, 903, 1077, 1098
MboI	GATC	9 cut(s)	319, 544, 597, 700, 805, 834, 901, 1075, 1096
MfeI	CAATTG	1 cut(s)	1296
MflI	RGATCY	5 cut(s)	544, 700, 805, 901, 1075
MhlI	GDGCHC	6 cut(s)	450, 565, 844, 859, 876, 956
MlsI	TGGCCA	1 cut(s)	1209
MluCI	AATT	6 cut(s)	258, 474, 1296, 1309, 1346, 1393
MluNI	TGGCCA	1 cut(s)	1209
MlyI	GAGTC	3 cut(s)	71, 729, 878
MmeI	TCCRAC	3 cut(s)	228, 1047, 1130
Mox20I	TGGCCA	1 cut(s)	1209
Mph1103I	ATGCAT	1 cut(s)	523
MroNI	GCCGGC	1 cut(s)	1261
MroXI	GAANNNNTTC	3 cut(s)	345, 578, 984
MscI	TGGCCA	1 cut(s)	1209
MslI	CAYNNNNRTG	2 cut(s)	315, 781
Msp20I	TGGCCA	1 cut(s)	1209
MspA1I	CMGCKG	1 cut(s)	977
MspCI	CTTAAG	3 cut(s)	455, 764, 1121
MspI	CCGG	3 cut(s)	558, 1262, 1388
MspR9I	CCNGG	3 cut(s)	288, 324, 1389
MunI	CAATTG	1 cut(s)	1296
Mva1269I	GAATGC	1 cut(s)	521
MvaI	CCWGG	2 cut(s)	288, 324
MwoI	GCNNNNNNNGC	8 cut(s)	19, 371, 854, 974, 1170, 1267, 1271, 1487
NaeI	GCCGGC	1 cut(s)	1263
NciI	CCSGG	1 cut(s)	1389
NdeII	GATC	9 cut(s)	319, 544, 597, 700, 805, 834, 901, 1075, 1096
NgoMIV	GCCGGC	1 cut(s)	1261
NmuCI	GTSAC	3 cut(s)	151, 1139, 1192
NsiI	ATGCAT	1 cut(s)	523
NspI	RCATGY	4 cut(s)	308, 403, 686, 1087
PaeI	GCATGC	1 cut(s)	308
PceI	AGGCCT	2 cut(s)	504, 670
PciI	ACATGT	1 cut(s)	1083
PciSI	GCTCTTC	1 cut(s)	898
PctI	GAATGC	1 cut(s)	521
PdiI	GCCGGC	1 cut(s)	1263
PdmI	GAANNNNTTC	3 cut(s)	345, 578, 984
PfeI	GAWTC	4 cut(s)	985, 1333, 1474, 1504
PflFI	GACNNNGTC	1 cut(s)	1198
PfoI	TCCNGGA	1 cut(s)	322
PkrI	GCNGC	8 cut(s)	12, 107, 367, 370, 373, 463, 796, 1489
PleI	GAGTC	3 cut(s)	71, 728, 878
PpsI	GAGTC	3 cut(s)	71, 728, 878
PscI	ACATGT	1 cut(s)	1083
Psp124BI	GAGCTC	2 cut(s)	450, 859
Psp6I	CCWGG	2 cut(s)	286, 322
PspGI	CCWGG	2 cut(s)	286, 322
PstI	CTGCAG	2 cut(s)	850, 1489
PsuI	RGATCY	5 cut(s)	544, 700, 805, 901, 1075
PsyI	GACNNNGTC	1 cut(s)	1198
PvuII	CAGCTG	1 cut(s)	977
RigI	GGCCGGCC	1 cut(s)	1265
RsaI	GTAC	2 cut(s)	651, 681
RsaNI	GTAC	2 cut(s)	650, 680
RseI	CAYNNNNRTG	2 cut(s)	315, 781
SacI	GAGCTC	2 cut(s)	450, 859
SapI	GCTCTTC	1 cut(s)	898
SatI	GCNGC	8 cut(s)	11, 106, 366, 369, 372, 462, 795, 1488
Sau3AI	GATC	9 cut(s)	319, 544, 597, 700, 805, 834, 901, 1075, 1096
SchI	GAGTC	3 cut(s)	71, 729, 878
ScrFI	CCNGG	3 cut(s)	288, 324, 1389
SduI	GDGCHC	6 cut(s)	450, 565, 844, 859, 876, 956
SfaNI	GCATC	3 cut(s)	730, 1021, 1393
SfcI	CTRYAG	2 cut(s)	846, 1485
SmiMI	CAYNNNNRTG	2 cut(s)	315, 781
SmlI	CTYRAG	7 cut(s)	159, 449, 455, 539, 764, 886, 1121
SmoI	CTYRAG	7 cut(s)	159, 449, 455, 539, 764, 886, 1121
SpeI	ACTAGT	1 cut(s)	178
SphI	GCATGC	1 cut(s)	308
Sse9I	AATT	6 cut(s)	258, 474, 1296, 1309, 1346, 1393
SseBI	AGGCCT	2 cut(s)	504, 670
SsiI	CCGC	1 cut(s)	464
SspMI	CTAG	5 cut(s)	56, 179, 432, 698, 771
SstI	GAGCTC	2 cut(s)	450, 859
StuI	AGGCCT	2 cut(s)	504, 670
StyD4I	CCNGG	3 cut(s)	286, 322, 1387
StyI	CCWWGG	1 cut(s)	390
TaaI	ACNGT	4 cut(s)	427, 935, 943, 1053
TaiI	ACGT	2 cut(s)	761, 953
TaqI	TCGA	3 cut(s)	664, 723, 755
TasI	AATT	6 cut(s)	258, 474, 1296, 1309, 1346, 1393
TatI	WGTACW	2 cut(s)	649, 679
TfiI	GAWTC	4 cut(s)	985, 1333, 1474, 1504
TseFI	GTSAC	3 cut(s)	151, 1139, 1192
TseI	GCWGC	8 cut(s)	10, 105, 365, 368, 371, 461, 794, 1487
Tsp45I	GTSAC	3 cut(s)	151, 1139, 1192
TspDTI	ATGAA	4 cut(s)	571, 771, 854, 885
TspGWI	ACGGA	2 cut(s)	199, 1016
Tth111I	GACNNNGTC	1 cut(s)	1198
Vha464I	CTTAAG	3 cut(s)	455, 764, 1121
VneI	GTGCAC	1 cut(s)	872
XagI	CCTNNNNNAGG	1 cut(s)	849
XapI	RAATTY	2 cut(s)	474, 1346
XbaI	TCTAGA	1 cut(s)	431
XceI	RCATGY	4 cut(s)	308, 403, 686, 1087
XmiI	GTMKAC	1 cut(s)	1374
XmnI	GAANNNNTTC	3 cut(s)	345, 578, 984
XspI	CTAG	5 cut(s)	56, 179, 432, 698, 771
Zsp2I	ATGCAT	1 cut(s)	523

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.