Rh2AG503800

The H protein shuttles the methylamine group of glycine from the P protein to the T protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
OG0005002
Physical Location & Seq
Reverse (-)
72633693 .. 72635312
1620 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2AG503800.1

Sequence Viewer

Length: 429 bp
ATGTTTTGCGCAACGAGGGCTTCTCTGTATCTGATGAACATGAAAACCTCAGTTCCTTCCTCTAGAGGCTTTTCTTCTGTTGTGAAGAGTTTAAAGTATGACAAGTCGCATGAGTGGGCAAGAGTTGATGGGATGTTGGCTACAATAGGGTTAAGTGATCCTGCTCAGAAGCACTTGGGTGCCAGCAAGGGCCTCCACTCTCCTCTCTCTGGCAATGTAATTGAAGTAAATCAAAAGCTTCGTACCTCTCCTGCTTTGGTGAATGGGAGCCCGTATGAAGATGGATGGATCATGAAGGTAGAAATGAGCAACAAAGAGGAGCTGAATAATCTGATGGACTATGATGAGTACGCGAGCTATGTGAAAACCAAGTTGCCAAACATTGATGAACCAGTTGAAAACACTTGGAATATGTTGTATCAGAAGTAA

Protein Analysis

142

Amino Acids

15.97

Weight (kDa)

6.83

Isoelectric Point (pI)

42.74

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GCV_H PF01597 65 - 123 1e-18 Glycine cleavage H-protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 10
AccB1I GGYRCC 1 cut(s) 179
AccII CGCG 1 cut(s) 353
AclWI GGATC 2 cut(s) 152, 296
AfaI GTAC 2 cut(s) 244, 350
AfiI CCNNNNNNNGG 1 cut(s) 209
AgsI TTSAA 2 cut(s) 224, 398
AleI CACNNNNGTG 1 cut(s) 177
AluBI AGCT 3 cut(s) 238, 322, 357
AluI AGCT 3 cut(s) 238, 322, 357
AlwI GGATC 2 cut(s) 152, 296
AoxI GGCC 1 cut(s) 190
AspLEI GCGC 1 cut(s) 11
AspS9I GGNCC 1 cut(s) 190
AsuHPI GGTGA 1 cut(s) 271
BanI GGYRCC 1 cut(s) 179
BanII GRGCYC 1 cut(s) 272
BccI CCATC 4 cut(s) 122, 275, 279, 328
BfaI CTAG 1 cut(s) 63
BmgT120I GGNCC 1 cut(s) 190
BmiI GGNNCC 2 cut(s) 181, 269
BplI GAGNNNNNCTC 2 cut(s) 7, 39
Bsc4I CCNNNNNNNGG 1 cut(s) 209
Bse1I ACTGG 1 cut(s) 392
Bse3DI GCAATG 1 cut(s) 220
BseGI GGATG 2 cut(s) 138, 290
BseLI CCNNNNNNNGG 1 cut(s) 209
BseMI GCAATG 1 cut(s) 220
BseMII CTCAG 2 cut(s) 63, 179
BseNI ACTGG 1 cut(s) 392
BseRI GAGGAG 2 cut(s) 192, 332
Bsh1236I CGCG 1 cut(s) 353
BshFI GGCC 1 cut(s) 192
BshNI GGYRCC 1 cut(s) 179
BslI CCNNNNNNNGG 1 cut(s) 209
BsnI GGCC 1 cut(s) 192
Bsp1286I GDGCHC 1 cut(s) 272
Bsp143I GATC 2 cut(s) 157, 288
BspANI GGCC 1 cut(s) 192
BspCNI CTCAG 2 cut(s) 62, 178
BspFNI CGCG 1 cut(s) 353
BspHI TCATGA 1 cut(s) 291
BspLI GGNNCC 2 cut(s) 181, 269
BspPI GGATC 2 cut(s) 152, 296
BspT107I GGYRCC 1 cut(s) 179
BsrDI GCAATG 1 cut(s) 220
BsrI ACTGG 1 cut(s) 392
BssMI GATC 2 cut(s) 157, 288
Bst6I CTCTTC 1 cut(s) 80
BstC8I GCNNGC 2 cut(s) 184, 355
BstDEI CTNAG 2 cut(s) 49, 165
BstF5I GGATG 2 cut(s) 138, 290
BstFNI CGCG 1 cut(s) 353
BstHHI GCGC 1 cut(s) 11
BstKTI GATC 2 cut(s) 160, 291
BstMBI GATC 2 cut(s) 157, 288
BstMWI GCNNNNNNNGC 1 cut(s) 17
BstUI CGCG 1 cut(s) 353
BsuRI GGCC 1 cut(s) 192
BtsCI GGATG 2 cut(s) 138, 290
Cac8I GCNNGC 2 cut(s) 184, 355
CciI TCATGA 1 cut(s) 291
CfoI GCGC 1 cut(s) 11
Cfr13I GGNCC 1 cut(s) 190
Csp6I GTAC 2 cut(s) 243, 349
CviAII CATG 3 cut(s) 40, 110, 292
CviJI RGCY 8 cut(s) 20, 69, 140, 192, 238, 270, 322, 357
CviKI_1 RGCY 8 cut(s) 20, 69, 140, 192, 238, 270, 322, 357
CviQI GTAC 2 cut(s) 243, 349
DdeI CTNAG 2 cut(s) 49, 165
DpnI GATC 2 cut(s) 159, 290
DpnII GATC 2 cut(s) 157, 288
DraI TTTAAA 1 cut(s) 93
Eam1104I CTCTTC 1 cut(s) 80
EarI CTCTTC 1 cut(s) 80
Eco24I GRGCYC 1 cut(s) 272
EcoO109I RGGNCCY 1 cut(s) 190
EcoT38I GRGCYC 1 cut(s) 272
FaeI CATG 3 cut(s) 43, 113, 295
FaiI YATR 8 cut(s) 41, 99, 111, 276, 293, 342, 360, 413
FatI CATG 3 cut(s) 39, 109, 291
FokI GGATG 2 cut(s) 145, 297
FriOI GRGCYC 1 cut(s) 272
FspBI CTAG 1 cut(s) 63
FspI TGCGCA 1 cut(s) 10
GlaI GCGC 1 cut(s) 10
HaeIII GGCC 1 cut(s) 192
HhaI GCGC 1 cut(s) 11
Hin1II CATG 3 cut(s) 43, 113, 295
Hin6I GCGC 1 cut(s) 9
HinP1I GCGC 1 cut(s) 9
HindIII AAGCTT 1 cut(s) 236
HphI GGTGA 1 cut(s) 271
Hpy188I TCNGA 4 cut(s) 33, 168, 333, 423
Hpy188III TCNNGA 2 cut(s) 63, 292
HpyAV CCTTC 2 cut(s) 66, 289
HpyF10VI GCNNNNNNNGC 1 cut(s) 17
HpyF3I CTNAG 2 cut(s) 49, 165
Hsp92II CATG 3 cut(s) 43, 113, 295
HspAI GCGC 1 cut(s) 9
Kzo9I GATC 2 cut(s) 157, 288
LmnI GCTCC 2 cut(s) 267, 319
LpnPI CCDG 5 cut(s) 174, 195, 196, 264, 405
MaeI CTAG 1 cut(s) 63
MalI GATC 2 cut(s) 159, 290
MboI GATC 2 cut(s) 157, 288
MboII GAAGA 3 cut(s) 66, 97, 290
MhlI GDGCHC 1 cut(s) 272
MluCI AATT 1 cut(s) 219
MnlI CCTC 8 cut(s) 9, 58, 59, 70, 203, 213, 256, 310
MseI TTAA 2 cut(s) 92, 152
MslI CAYNNNNRTG 1 cut(s) 177
MvnI CGCG 1 cut(s) 353
MwoI GCNNNNNNNGC 1 cut(s) 17
NdeII GATC 2 cut(s) 157, 288
NlaIII CATG 3 cut(s) 43, 113, 295
NlaIV GGNNCC 2 cut(s) 181, 269
NsbI TGCGCA 1 cut(s) 10
OliI CACNNNNGTG 1 cut(s) 177
PagI TCATGA 1 cut(s) 291
PspN4I GGNNCC 2 cut(s) 181, 269
PspPI GGNCC 1 cut(s) 190
RsaI GTAC 2 cut(s) 244, 350
RsaNI GTAC 2 cut(s) 243, 349
RseI CAYNNNNRTG 1 cut(s) 177
SaqAI TTAA 2 cut(s) 92, 152
Sau3AI GATC 2 cut(s) 157, 288
Sau96I GGNCC 1 cut(s) 190
SduI GDGCHC 1 cut(s) 272
SetI ASST 6 cut(s) 50, 240, 248, 300, 324, 359
SmiMI CAYNNNNRTG 1 cut(s) 177
Sse9I AATT 1 cut(s) 219
SspMI CTAG 1 cut(s) 63
TasI AATT 1 cut(s) 219
Tru1I TTAA 2 cut(s) 92, 152
Tru9I TTAA 2 cut(s) 92, 152
TspDTI ATGAA 5 cut(s) 50, 56, 291, 308, 402
XbaI TCTAGA 1 cut(s) 62
XspI CTAG 1 cut(s) 63
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.