Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5D

Orthogroup ID

OG0008257

Physical Location & Seq

Genomic Coordinates Reverse (-)

14950494 .. 14957257

Gene Structure 6764 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5DG146500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1878 bp

ATGGGCGACAGTCAGTACTCGTTTTCGCTCACCACTTTCAGTCCTTCAGGGAAGCTGGTGCAGATCGAGCACGCTTTGACAGCAGTCGGGTCGGGTCAGACCTCTTTGGGGATCAAGGCTTCCAATGGAGTTGTTATTGCCACCGAGAAGAAGCTACCTTCAATCTTGGTTGATGAAGCATCTGTTCAAAAGATACAGTGTTTGACACCAAATATTGGAGTTGTTTACAGTGGTATGGGTCCTGATTTTCGAGTTTTGGTTCGGAAAAGCAGGAAGCAGGCAGTGCAGTATCATCAGTTATATAAGGAACCAATCCCTGTTACTCAACTTGTGAGGGAAACTGCTGCTGTGATGCAAGAGTTTACTCAATCTGGTGGTGTAAGGCCTTTTGGAGTATCTCTTCTGGTTGCTGGTTTTGATGACAGTGGTCCCCAACTATTCCAGGTTGATCCTTCAGGTTCATATTTTTCATGGAAAGCCTCTGCAATGGGAAAGAATGTCTCAAATGCAAAAACTTTTCTTGAGAAGAGGTACACTGATGAAATTGAGCTTGAAGATGCTGTGCACACGGCTATTTTGACTCTGAAGGAGGGATTTGAAGGACAGATCTCAGGGAAGAACATTGAGATTGGAATAATTGGCGAAGACAAAATATTCAGGGTGCTATCCCCAGCAGAGATTGAAGATTATTTGGCTGAAGTCGAGTTGACTGTTGAGCGTGCCATTAGCTACATTTTCATTGGATCAAGAAGCTGCAAGACTAATTGCAGATGGAAAGCCAAGAGTTCCAATGGTGGAGCTGCTGGGAAGAGCAAGCCTAAGCTTGACACCATCTATATTGACAAACGCGGGAAATTCAGAAGCTTCAACCACAAGAAAGTGTCTAGGAAACGATGTGGTTCTCTAAGGAGCCGAGGATGGAAGTATGGATCCGGGTTTGTTGATGGAATTTTCCCAGTGATGAGCCCCACTGCTGAGCAGATTCTGGACATTGTACAGAACGAAGCAGATAGAATTAAAATATGGGAAGTTCTTGACACTCTTCCGGCCTCTCATATCATATGGGATGACATCATTAATGTAGCTGTTCAACTTCGTCTCAATAAAATGTGGGATTCCATAATCTTGATGTGTGAGTGGATATTGCACAAGAGCTCCTACAAGCCAGATGTAATCTGCTATAATTTACTGCTAGACGCTTATGGGCAGAAATCACTGCATAAAGAGGCAGAATCCACATATTTGGAACTTCTTGAAGCTCGATGCATTCCCACCGAGGACACTTATGCCCTTCTTATAAAGGCCTACTGCAAGTCTGGATTGCTAGATAGGGCTGAAGCCATTTTTGGTGAAATGCGCAAGTATGGTCTTCCTCCAAGTGCAATTGTGTTTGATGCTTATATTAATGGGTTGATAAAAGGAGGAAACCCTCAAAAAGCAGAAGAGATCTTTCAGAGGATGAAAAGAGATCAATGCGAACCATCTGCCGACACTTATACTATGTTAATCAATATATATGGGAAGGCAAGAAAATCCTATATGGCCCTAAAACTGTTCCGCGAAATGAGAAGTCAGAAATGTAAACCTAACATATGCACATATACTGCTTTGATAAATGCATTTGCTAGGGAAGGAAATTGTGAGAAAGCAGAAGAGATATTTGAGCAGCTACAAGAGGCAGGGCTTGAGCCTGATGTGTATGCTTACAATGCCCTTATGGAAGCTTACAGTCGAGCAGGATATCCTTATGGAGCTGCAGAAATTTTCTCTTTGATGCAGCACATGGGATGTGAACCAGATAGAGCTTCATATAATATCATGGTAGATGCATATGGTAGAGGGGGTCTGCATGAAGGTACTTTAACATCTAGCCTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

625

Amino Acids

69.71

Weight (kDa)

7.47

Isoelectric Point (pI)

40.04

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Proteasome_A_N	PF10584	6 - 28	6e-08	Proteasome subunit A N-terminal signature
Proteasome	PF00227	31 - 213	1.9e-55	Proteasome subunit
PPR_2	PF13041	389 - 438	1.6e-09	PPR repeat family
PPR_1	PF12854	422 - 453	6.2e-08	PPR repeat
PPR_2	PF13041	428 - 471	4.2e-07	PPR repeat family
PPR	PF01535	428 - 457	3.9e-07	PPR repeat
PPR_3	PF13812	448 - 508	2e-10	Pentatricopeptide repeat domain
PPR_2	PF13041	459 - 505	7.4e-10	PPR repeat family
PPR_long	PF17177	480 - 602	5.4e-13	Pentacotripeptide-repeat region of PRORP
PPR	PF01535	498 - 527	5.8e-06	PPR repeat
PPR_2	PF13041	498 - 543	1.2e-12	PPR repeat family
PPR_3	PF13812	509 - 541	9.7e-07	Pentatricopeptide repeat domain
PPR_3	PF13812	517 - 576	2.2e-15	Pentatricopeptide repeat domain
PPR_1	PF12854	527 - 556	3.1e-08	PPR repeat
PPR_2	PF13041	529 - 570	1.5e-10	PPR repeat family
PPR	PF01535	533 - 562	1.4e-07	PPR repeat
TPR_24	PF23276	541 - 609	4.5e-06	Fungal tetratrico peptide repeats
PPR_3	PF13812	553 - 612	7.1e-12	Pentatricopeptide repeat domain
PPR_2	PF13041	564 - 611	8.5e-12	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0008257)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G35130 AT2G35130 AT2G35130
fragaria_vesca	FvH4_3g12360
malus_domestica	MD05G1251300.v1.1 MD10G1231700.v1.1 MD10G1231800.v1.1
prunus_persica	Prupe.4G112600_v2.0.a1
pyrus_communis	pycom05g20750 pycom05g22900 pycom10g19500 pycom10g19510
rosa_chinensis	RchiOBHm_Chr5g0020151
rosa_laevigata	RLG00000032505
rosa_roxburghii	Rroxscaffold_1G00058050
rosa_rugosa	Rorug05G0057400 Rorug05G0057500
rosa_samantha	Rh5AG147600 Rh5AG147700 Rh5BG147200 Rh5CG158600 Rh5DG146500
rosa_wichuraiana	Rw5G013050

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1298
Acc16I	TGCGCA	1 cut(s)	1358
AccB7I	CCANNNNNTGG	1 cut(s)	215
AccII	CGCG	2 cut(s)	849, 1560
AciI	CCGC	2 cut(s)	849, 1558
AclWI	GGATC	5 cut(s)	119, 443, 751, 924, 937
AcsI	RAATTY	3 cut(s)	854, 948, 1761
AcuI	CTGAAG	5 cut(s)	30, 438, 605, 717, 1356
AfaI	GTAC	4 cut(s)	17, 533, 996, 1858
AfiI	CCNNNNNNNGG	2 cut(s)	108, 215
AgsI	TTSAA	8 cut(s)	162, 188, 554, 599, 683, 868, 1091, 1256
AjnI	CCWGG	1 cut(s)	441
AjuI	GAANNNNNNNTTGG	2 cut(s)	1329, 1361
Alw21I	GWGCWC	3 cut(s)	72, 567, 1157
Alw26I	GTCTC	2 cut(s)	505, 1103
Alw44I	GTGCAC	1 cut(s)	563
AlwI	GGATC	5 cut(s)	119, 443, 751, 924, 937
AlwNI	CAGNNNCTG	1 cut(s)	985
AoxI	GGCC	4 cut(s)	383, 1047, 1302, 1542
ApaLI	GTGCAC	1 cut(s)	563
ApeKI	GCWGC	6 cut(s)	344, 753, 800, 1666, 1754, 1777
ApoI	RAATTY	3 cut(s)	854, 948, 1761
AseI	ATTAAT	2 cut(s)	1077, 1404
AspLEI	GCGC	1 cut(s)	1359
AspS9I	GGNCC	3 cut(s)	239, 428, 1543
AsuC2I	CCSGG	1 cut(s)	934
AsuHPI	GGTGA	2 cut(s)	22, 1361
AvaII	GGWCC	2 cut(s)	239, 428
BaeGI	GKGCMC	1 cut(s)	567
BamHI	GGATCC	1 cut(s)	929
BanII	GRGCYC	2 cut(s)	968, 1157
BbsI	GAAGAC	2 cut(s)	651, 1361
Bbv12I	GWGCWC	3 cut(s)	72, 567, 1157
BbvI	GCAGC	6 cut(s)	331, 740, 787, 1678, 1741, 1789
BccI	CCATC	5 cut(s)	765, 839, 912, 938, 1489
BceAI	ACGGC	1 cut(s)	585
BcgI	CGANNNNNNTGC	4 cut(s)	72, 106, 1466, 1500
BciT130I	CCWGG	1 cut(s)	443
BcnI	CCSGG	1 cut(s)	934
BcoDI	GTCTC	2 cut(s)	505, 1103
BfaI	CTAG	5 cut(s)	885, 1193, 1325, 1626, 1869
BfmI	CTRYAG	1 cut(s)	1755
BglII	AGATCT	2 cut(s)	606, 1446
BisI	GCNGC	6 cut(s)	345, 754, 801, 1667, 1755, 1778
BlpI	GCTNAGC	1 cut(s)	975
BlsI	GCNGC	6 cut(s)	346, 755, 802, 1668, 1756, 1779
BmcAI	AGTACT	1 cut(s)	17
Bme1390I	CCNGG	2 cut(s)	443, 934
Bme18I	GGWCC	2 cut(s)	239, 428
BmgT120I	GGNCC	3 cut(s)	239, 428, 1543
BmiI	GGNNCC	5 cut(s)	240, 309, 430, 911, 931
BmrFI	CCNGG	2 cut(s)	443, 934
BmrI	ACTGGG	1 cut(s)	950
BmsI	GCATC	7 cut(s)	188, 342, 547, 1253, 1384, 1764, 1816
BmuI	ACTGGG	1 cut(s)	950
BoxI	GACNNNNGTC	2 cut(s)	83, 426
BpiI	GAAGAC	2 cut(s)	651, 1361
Bpu10I	CCTNAGC	1 cut(s)	819
Bpu1102I	GCTNAGC	1 cut(s)	975
BpuEI	CTTGAG	2 cut(s)	542, 1706
BpuMI	CCSGG	1 cut(s)	934
BsaJI	CCNNGG	2 cut(s)	913, 1275
BsaXI	ACNNNNNCTCC	2 cut(s)	1139, 1169
Bsc4I	CCNNNNNNNGG	2 cut(s)	108, 215
Bse1I	ACTGG	1 cut(s)	956
Bse3DI	GCAATG	1 cut(s)	492
BseBI	CCWGG	1 cut(s)	443
BseDI	CCNNGG	2 cut(s)	913, 1275
BseGI	GGATG	4 cut(s)	923, 1072, 1464, 1793
BseLI	CCNNNNNNNGG	2 cut(s)	108, 215
BseMI	GCAATG	1 cut(s)	492
BseMII	CTCAG	2 cut(s)	624, 966
BseNI	ACTGG	1 cut(s)	956
BseSI	GKGCMC	1 cut(s)	567
BseXI	GCAGC	6 cut(s)	331, 740, 787, 1678, 1741, 1789
BseYI	CCCAGC	2 cut(s)	670, 803
BsgI	GTGCAG	2 cut(s)	80, 305
Bsh1236I	CGCG	2 cut(s)	849, 1560
BshFI	GGCC	4 cut(s)	385, 1049, 1304, 1544
BsiHKAI	GWGCWC	3 cut(s)	72, 567, 1157
BsiSI	CCGG	2 cut(s)	933, 1046
BslFI	GGGAC	1 cut(s)	414
BslI	CCNNNNNNNGG	2 cut(s)	108, 215
BsmAI	GTCTC	2 cut(s)	505, 1103
BsmBI	CGTCTC	1 cut(s)	1103
BsmFI	GGGAC	1 cut(s)	414
BsmI	GAATGC	1 cut(s)	1266
BsnI	GGCC	4 cut(s)	385, 1049, 1304, 1544
Bsp1286I	GDGCHC	4 cut(s)	72, 567, 968, 1157
Bsp1407I	TGTACA	1 cut(s)	994
Bsp143I	GATC	8 cut(s)	63, 111, 448, 606, 743, 929, 1446, 1468
Bsp1720I	GCTNAGC	1 cut(s)	975
BspACI	CCGC	2 cut(s)	849, 1558
BspANI	GGCC	4 cut(s)	385, 1049, 1304, 1544
BspCNI	CTCAG	2 cut(s)	623, 967
BspFNI	CGCG	2 cut(s)	849, 1560
BspLI	GGNNCC	5 cut(s)	240, 309, 430, 911, 931
BspMAI	CTGCAG	1 cut(s)	1759
BspPI	GGATC	5 cut(s)	119, 443, 751, 924, 937
BspQI	GCTCTTC	1 cut(s)	803
BsrDI	GCAATG	1 cut(s)	492
BsrGI	TGTACA	1 cut(s)	994
BsrI	ACTGG	1 cut(s)	956
BssECI	CCNNGG	2 cut(s)	913, 1275
BssMI	GATC	8 cut(s)	63, 111, 448, 606, 743, 929, 1446, 1468
Bst2UI	CCWGG	1 cut(s)	443
Bst4CI	ACNGT	7 cut(s)	11, 198, 230, 425, 712, 1554, 1730
Bst6I	CTCTTC	6 cut(s)	405, 521, 803, 1047, 1437, 1647
BstAPI	GCANNNNNTGC	1 cut(s)	283
BstAUI	TGTACA	1 cut(s)	994
BstC8I	GCNNGC	4 cut(s)	72, 279, 720, 815
BstDEI	CTNAG	4 cut(s)	610, 819, 905, 975
BstF5I	GGATG	4 cut(s)	923, 1072, 1464, 1793
BstFNI	CGCG	2 cut(s)	849, 1560
BstHHI	GCGC	1 cut(s)	1359
BstKTI	GATC	8 cut(s)	66, 114, 451, 609, 746, 932, 1449, 1471
BstMAI	GTCTC	2 cut(s)	505, 1103
BstMBI	GATC	8 cut(s)	63, 111, 448, 606, 743, 929, 1446, 1468
BstMWI	GCNNNNNNNGC	4 cut(s)	67, 80, 283, 1709
BstNI	CCWGG	1 cut(s)	443
BstPAI	GACNNNNGTC	2 cut(s)	83, 426
BstSCI	CCNGG	2 cut(s)	441, 932
BstSFI	CTRYAG	1 cut(s)	1755
BstSLI	GKGCMC	1 cut(s)	567
BstUI	CGCG	2 cut(s)	849, 1560
BstV1I	GCAGC	6 cut(s)	331, 740, 787, 1678, 1741, 1789
BstV2I	GAAGAC	2 cut(s)	651, 1361
BstX2I	RGATCY	3 cut(s)	606, 929, 1446
BstXI	CCANNNNNNTGG	1 cut(s)	1243
BstYI	RGATCY	3 cut(s)	606, 929, 1446
BsuRI	GGCC	4 cut(s)	385, 1049, 1304, 1544
BtsCI	GGATG	4 cut(s)	923, 1072, 1464, 1793
BtsI	GCAGTG	3 cut(s)	288, 969, 1214
BtsIMutI	CAGTG	8 cut(s)	203, 235, 288, 430, 534, 963, 969, 1214
Cac8I	GCNNGC	4 cut(s)	72, 279, 720, 815
CaiI	CAGNNNCTG	1 cut(s)	985
CfoI	GCGC	1 cut(s)	1359
Cfr13I	GGNCC	3 cut(s)	239, 428, 1543
CseI	GACGC	1 cut(s)	1205
Csp6I	GTAC	4 cut(s)	16, 532, 995, 1857
CviAII	CATG	4 cut(s)	471, 1783, 1819, 1850
CviQI	GTAC	4 cut(s)	16, 532, 995, 1857
DdeI	CTNAG	4 cut(s)	610, 819, 905, 975
DpnI	GATC	8 cut(s)	65, 113, 450, 608, 745, 931, 1448, 1470
DpnII	GATC	8 cut(s)	63, 111, 448, 606, 743, 929, 1446, 1468
Eam1104I	CTCTTC	6 cut(s)	405, 521, 803, 1047, 1437, 1647
EarI	CTCTTC	6 cut(s)	405, 521, 803, 1047, 1437, 1647
Ecl136II	GAGCTC	1 cut(s)	1155
Eco147I	AGGCCT	2 cut(s)	385, 1304
Eco24I	GRGCYC	2 cut(s)	968, 1157
Eco32I	GATATC	1 cut(s)	1742
Eco47I	GGWCC	2 cut(s)	239, 428
Eco53kI	GAGCTC	1 cut(s)	1155
Eco57I	CTGAAG	5 cut(s)	30, 438, 605, 717, 1356
EcoICRI	GAGCTC	1 cut(s)	1155
EcoO109I	RGGNCCY	1 cut(s)	239
EcoRII	CCWGG	1 cut(s)	441
EcoRV	GATATC	1 cut(s)	1742
EcoT22I	ATGCAT	3 cut(s)	1268, 1621, 1831
EcoT38I	GRGCYC	2 cut(s)	968, 1157
Esp3I	CGTCTC	1 cut(s)	1103
FaeI	CATG	4 cut(s)	474, 1786, 1822, 1853
FaqI	GGGAC	1 cut(s)	414
FatI	CATG	4 cut(s)	470, 1782, 1818, 1849
FauI	CCCGC	1 cut(s)	842
FauNDI	CATATG	3 cut(s)	1061, 1592, 1831
Fnu4HI	GCNGC	6 cut(s)	345, 754, 801, 1667, 1755, 1778
FokI	GGATG	4 cut(s)	930, 1079, 1471, 1800
FriOI	GRGCYC	2 cut(s)	968, 1157
Fsp4HI	GCNGC	6 cut(s)	345, 754, 801, 1667, 1755, 1778
FspBI	CTAG	5 cut(s)	885, 1193, 1325, 1626, 1869
FspI	TGCGCA	1 cut(s)	1358
GlaI	GCGC	1 cut(s)	1358
GluI	GCNGC	6 cut(s)	345, 754, 801, 1667, 1755, 1778
GsaI	CCCAGC	2 cut(s)	674, 807
HaeIII	GGCC	4 cut(s)	385, 1049, 1304, 1544
HapII	CCGG	2 cut(s)	933, 1046
HgaI	GACGC	1 cut(s)	1205
HhaI	GCGC	1 cut(s)	1359
Hin1II	CATG	4 cut(s)	474, 1786, 1822, 1853
Hin6I	GCGC	1 cut(s)	1357
HinP1I	GCGC	1 cut(s)	1357
HincII	GTYRAC	1 cut(s)	708
HindII	GTYRAC	1 cut(s)	708
HindIII	AAGCTT	3 cut(s)	821, 862, 1722
HinfI	GANTC	4 cut(s)	580, 982, 1115, 1232
HpaII	CCGG	2 cut(s)	933, 1046
HphI	GGTGA	2 cut(s)	22, 1361
Hpy166II	GTNNAC	7 cut(s)	226, 363, 534, 565, 708, 1583, 1793
Hpy188I	TCNGA	6 cut(s)	99, 264, 585, 860, 1455, 1575
Hpy188III	TCNNGA	8 cut(s)	242, 521, 747, 986, 1034, 1126, 1253, 1317
Hpy8I	GTNNAC	7 cut(s)	226, 363, 534, 565, 708, 1583, 1793
HpyAV	CCTTC	9 cut(s)	54, 168, 462, 580, 593, 1301, 1516, 1625, 1847
HpyCH4III	ACNGT	7 cut(s)	11, 198, 230, 425, 712, 1554, 1730
HpyF10VI	GCNNNNNNNGC	4 cut(s)	67, 80, 283, 1709
HpyF3I	CTNAG	4 cut(s)	610, 819, 905, 975
Hsp92II	CATG	4 cut(s)	474, 1786, 1822, 1853
HspAI	GCGC	1 cut(s)	1357
Kzo9I	GATC	8 cut(s)	63, 111, 448, 606, 743, 929, 1446, 1468
LguI	GCTCTTC	1 cut(s)	803
LmnI	GCTCC	4 cut(s)	797, 909, 1160, 1751
Lsp1109I	GCAGC	6 cut(s)	331, 740, 787, 1678, 1741, 1789
LweI	GCATC	7 cut(s)	188, 342, 547, 1253, 1384, 1764, 1816
MaeI	CTAG	5 cut(s)	885, 1193, 1325, 1626, 1869
MaeIII	GTNAC	1 cut(s)	319
MalI	GATC	8 cut(s)	65, 113, 450, 608, 745, 931, 1448, 1470
MboI	GATC	8 cut(s)	63, 111, 448, 606, 743, 929, 1446, 1468
MfeI	CAATTG	1 cut(s)	1383
MflI	RGATCY	3 cut(s)	606, 929, 1446
MhlI	GDGCHC	4 cut(s)	72, 567, 968, 1157
MlyI	GAGTC	1 cut(s)	574
Mph1103I	ATGCAT	3 cut(s)	1268, 1621, 1831
MseI	TTAA	5 cut(s)	1017, 1077, 1404, 1505, 1862
MspI	CCGG	2 cut(s)	933, 1046
MspR9I	CCNGG	2 cut(s)	443, 934
MunI	CAATTG	1 cut(s)	1383
Mva1269I	GAATGC	1 cut(s)	1266
MvaI	CCWGG	1 cut(s)	443
MvnI	CGCG	2 cut(s)	849, 1560
MwoI	GCNNNNNNNGC	4 cut(s)	67, 80, 283, 1709
NciI	CCSGG	1 cut(s)	934
NdeI	CATATG	3 cut(s)	1061, 1592, 1831
NdeII	GATC	8 cut(s)	63, 111, 448, 606, 743, 929, 1446, 1468
NlaIII	CATG	4 cut(s)	474, 1786, 1822, 1853
NlaIV	GGNNCC	5 cut(s)	240, 309, 430, 911, 931
NmeAIII	GCCGAG	1 cut(s)	938
NsbI	TGCGCA	1 cut(s)	1358
NsiI	ATGCAT	3 cut(s)	1268, 1621, 1831
PceI	AGGCCT	2 cut(s)	385, 1304
PciSI	GCTCTTC	1 cut(s)	803
PctI	GAATGC	1 cut(s)	1266
PfeI	GAWTC	3 cut(s)	982, 1115, 1232
PflMI	CCANNNNNTGG	1 cut(s)	215
PkrI	GCNGC	6 cut(s)	346, 755, 802, 1668, 1756, 1779
PleI	GAGTC	1 cut(s)	574
PpsI	GAGTC	1 cut(s)	574
PpuMI	RGGWCCY	1 cut(s)	239
PshAI	GACNNNNGTC	2 cut(s)	83, 426
PshBI	ATTAAT	2 cut(s)	1077, 1404
PsiI	TTATAA	1 cut(s)	1298
Psp124BI	GAGCTC	1 cut(s)	1157
Psp5II	RGGWCCY	1 cut(s)	239
Psp6I	CCWGG	1 cut(s)	441
PspFI	CCCAGC	2 cut(s)	670, 803
PspGI	CCWGG	1 cut(s)	441
PspN4I	GGNNCC	5 cut(s)	240, 309, 430, 911, 931
PspPI	GGNCC	3 cut(s)	239, 428, 1543
PspPPI	RGGWCCY	1 cut(s)	239
PstI	CTGCAG	1 cut(s)	1759
PstNI	CAGNNNCTG	1 cut(s)	985
PsuI	RGATCY	3 cut(s)	606, 929, 1446
RsaI	GTAC	4 cut(s)	17, 533, 996, 1858
RsaNI	GTAC	4 cut(s)	16, 532, 995, 1857
SacI	GAGCTC	1 cut(s)	1157
SapI	GCTCTTC	1 cut(s)	803
SaqAI	TTAA	5 cut(s)	1017, 1077, 1404, 1505, 1862
SatI	GCNGC	6 cut(s)	345, 754, 801, 1667, 1755, 1778
Sau3AI	GATC	8 cut(s)	63, 111, 448, 606, 743, 929, 1446, 1468
Sau96I	GGNCC	3 cut(s)	239, 428, 1543
ScaI	AGTACT	1 cut(s)	17
SchI	GAGTC	1 cut(s)	574
ScrFI	CCNGG	2 cut(s)	443, 934
SduI	GDGCHC	4 cut(s)	72, 567, 968, 1157
SfaNI	GCATC	7 cut(s)	188, 342, 547, 1253, 1384, 1764, 1816
SfcI	CTRYAG	1 cut(s)	1755
SinI	GGWCC	2 cut(s)	239, 428
SmlI	CTYRAG	2 cut(s)	521, 1685
SmoI	CTYRAG	2 cut(s)	521, 1685
SseBI	AGGCCT	2 cut(s)	385, 1304
SsiI	CCGC	2 cut(s)	849, 1558
SspI	AATATT	2 cut(s)	214, 654
SspMI	CTAG	5 cut(s)	885, 1193, 1325, 1626, 1869
SstI	GAGCTC	1 cut(s)	1157
StuI	AGGCCT	2 cut(s)	385, 1304
StyD4I	CCNGG	2 cut(s)	441, 932
TaaI	ACNGT	7 cut(s)	11, 198, 230, 425, 712, 1554, 1730
TaqI	TCGA	5 cut(s)	66, 250, 702, 1261, 1732
TatI	WGTACW	2 cut(s)	15, 994
TfiI	GAWTC	3 cut(s)	982, 1115, 1232
Tru1I	TTAA	5 cut(s)	1017, 1077, 1404, 1505, 1862
Tru9I	TTAA	5 cut(s)	1017, 1077, 1404, 1505, 1862
TscAI	CASTG	8 cut(s)	203, 235, 288, 430, 541, 963, 976, 1221
TseI	GCWGC	6 cut(s)	344, 753, 800, 1666, 1754, 1777
TspDTI	ATGAA	8 cut(s)	189, 450, 459, 555, 727, 1475, 1797, 1866
TspRI	CASTG	8 cut(s)	203, 235, 288, 430, 541, 963, 976, 1221
Van91I	CCANNNNNTGG	1 cut(s)	215
VneI	GTGCAC	1 cut(s)	563
VpaK11BI	GGWCC	2 cut(s)	239, 428
VspI	ATTAAT	2 cut(s)	1077, 1404
XapI	RAATTY	3 cut(s)	854, 948, 1761
XspI	CTAG	5 cut(s)	885, 1193, 1325, 1626, 1869
ZrmI	AGTACT	1 cut(s)	17
Zsp2I	ATGCAT	3 cut(s)	1268, 1621, 1831

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.