AT3G17650

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Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
OG0009787
Physical Location & Seq
Forward (+)
6034109 .. 6037349
3241 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G17650.1

Sequence Viewer

Length: 2145 bp
ATGAGAAAGGGAGTTCTAAATCCTGACAGAGATCGTCAGATAGTGGAACATGAGTTGCAGGAAACTGGGTTTAGTCCAGAAACAGAGAAAGTCAAGAACAAGAATTTTGAAGAAGATGAAGAGGAAGAAGATGAATCTGTGGAGAAGATATTTGAGAGTAGAGAAGTACCTTCTTGGAAGAAGCAGTTGACGGTGAGGGCTTTTGTGGTGAGCTTTATGCTAAGCATCTTGTTTAGTTTCATTGTTATGAAGCTTAACCTCACAACGGGAATCATCCCTTCGCTCAATGTCTCTGCTGGTCTTTTGGGTTTCTTCTTTGTCAAGACATGGACTAAGATGCTCCATAGGTCTGGTCTCTTGAAACAGCCATTTACTCGCCAGGAGAATACTGTTATTCAGACCTGTGTTGTTGCCTCTTCTGGCATTGCCTTCAGCGGAGGTTTTGGGACATACCTCTTTGGCATGAGTGAACGAATTGCGACCCAATCAGGAGATGTATCCCGTGGCGTCAAGGACCCTTCTTTGGGTTGGATTATCGGTTTCCTCTTTGTCGTCAGCTTTCTTGGCCTCTTCTCAGTTGTCCCCCTGCGAAAGATAATGGTAATAGACTTCAAACTAACATACCCAAGTGGTACTGCAACAGCTCATCTTATCAACAGCTTTCACACCCCTCAAGGCGCCAAGCTAGCCAAGAAACAAGTGAGGGTGTTGGGGAAATTTTTCTCTTTAAGCTTCTTCTGGAGTTTCTTCCAATGGTTCTTTACCGGAGGAGAAAATTGTGGGTTCTCCAACTTCCCAACATTTGGACTCAAAGCTTACCAGTACAAGTTCTACTTTGATTTTTCAGCAACATATGTTGGTGTTGGAATGATATGTCCGTATATAATCAACATCTCTGTCCTATTGGGAGGAATCCTCTCTTGGGGGATAATGTGGCCCCTCATTGAAACCAAAAAGGGAGATTGGTTCCCTGATAATGTCCCATCCAGCAGCATGCATGGTCTCCAAGCTTACAAGGTGTTTATAGCTGTTGCTATAATCCTAGGAGATGGCTTATACAACTTTTGCAAGGTGCTGAGCCGGACTCTTTCAGGATTATTTGTACAGCTCCGAGGCCCTACTACATCTATTTCAAGAACCTCCTTCACACTTGAAGAAGACCCTCATGCTTCCCCACTAAGCCCAAAGCAATCTTATGATGACCAACGTCGTACAAGATTCTTCCTCAAAGACCAAATCCCTACTTGGTTTGCTGTTGGAGGTTATATCACAATAGCTGCAACATCTACAGCGATACTCCCTCACATGTTCCACCAGCTGAGATGGTATTACATTCTGGTCATCTATATCTGCGCGCCTGTCTTAGCTTTCTGTAACGCTTATGGAGCTGGACTCACAGACTGGTCCTTGGCTTCAACTTATGGAAAGTTAGCCATATTCACAATTGGAGCTTGGGCTGGCTCTGAGCACGGTGGTATGCTGGCTGGTCTAGCAGCATGTGGTGTCATGATGAACATAGTCTCGACAGCTTCGGATCTAACACAAGACTTCAAGACAGGCTACCTCACTTTATCATCTCCAAAGTCAATGTTTGTGAGCCAAGTGATTGGAACAGCAATGGGTTGTGTGGTATCTCCTTGCGTGTTCTGGCTATTCTACAAAGCGTTTGATGATTTAGGCCTCCCAAACACTGAATACCCTGCTCCATTTGCTACTGTATATCGAAGCATGGCTAAACTAGGAGTGGAAGGTGTCGCATCTCTACCGAGAGAATGTCTTGTTCTATGCTACGCGTTCTTCGGTGTGGCGATTCTCGTAAACATAGTAAAAGATAGTCTCCATAGCAATTGGGGAAGGTTCATTCCACTTCCCATGGCAATGGCTATACCGTTTTTCTTGGGACCTTACTTCGCAATTGACATGTGTGTGGGAAGTTTGATACTTTTTATCTGGGAAAGAGTAGATGCAGCCAAGGCTGAAGCTTTTGGGACAGCGGTGGCTTCTGGTTTGATATGCGGAGATGGCATTTGGTCTTTGCCGAGCTCCGTGCTCGCTATAGCCGGAGTTAATCCTCCTGTTTGCATGAAGTTTCTCTCTTCTGCAACCAATTCAAAGGTCGACAACTTCCTGAAAGGATCCATTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0008150 GO:0016020 GO:0022857 GO:0044464 GO:0051179 GO:0051234 GO:0055085 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
OPT

Protein Analysis

714

Amino Acids

78.85

Weight (kDa)

8.49

Isoelectric Point (pI)

37.0

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
OPT PF03169 62 - 684 1.8e-176 OPT oligopeptide transporter protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 677
AccB7I CCANNNNNTGG 1 cut(s) 803
AccI GTMKAC 1 cut(s) 2118
AccII CGCG 2 cut(s) 1355, 1793
AciI CCGC 3 cut(s) 435, 1994, 2016
AclWI GGATC 3 cut(s) 1542, 2130, 2143
AcsI RAATTY 2 cut(s) 103, 716
AcuI CTGAAG 2 cut(s) 415, 1998
AcyI GRCGYC 2 cut(s) 507, 678
AfaI GTAC 5 cut(s) 168, 634, 824, 1104, 1213
AfiI CCNNNNNNNGG 5 cut(s) 265, 523, 524, 803, 922
AflIII ACRYGT 3 cut(s) 1305, 1791, 1920
AgsI TTSAA 9 cut(s) 110, 361, 613, 947, 1134, 1154, 1416, 1552, 2112
AjnI CCWGG 1 cut(s) 378
AjuI GAANNNNNNNTTGG 2 cut(s) 904, 936
Alw21I GWGCWC 3 cut(s) 1470, 2045, 2052
Alw26I GTCTC 5 cut(s) 295, 359, 1007, 1525, 1841
AlwI GGATC 3 cut(s) 1542, 2130, 2143
AoxI GGCC 4 cut(s) 565, 935, 1114, 1678
ApeKI GCWGC 4 cut(s) 990, 1277, 1493, 1967
ApoI RAATTY 2 cut(s) 103, 716
Asp700I GAANNNNTTC 1 cut(s) 719
AspA2I CCTAGG 1 cut(s) 1042
AspLEI GCGC 3 cut(s) 680, 1355, 1357
AspS9I GGNCC 5 cut(s) 514, 936, 1115, 1404, 1901
AsuHPI GGTGA 2 cut(s) 205, 220
AsuNHI GCTAGC 1 cut(s) 685
AvaII GGWCC 3 cut(s) 514, 1404, 1901
AvrII CCTAGG 1 cut(s) 1042
BamHI GGATCC 1 cut(s) 2135
BanI GGYRCC 1 cut(s) 677
BanII GRGCYC 1 cut(s) 2045
BbsI GAAGAC 1 cut(s) 1164
Bbv12I GWGCWC 3 cut(s) 1470, 2045, 2052
BbvI GCAGC 4 cut(s) 1002, 1264, 1505, 1979
BccI CCATC 4 cut(s) 991, 1043, 1317, 2015
BcgI CGANNNNNNTGC 2 cut(s) 2029, 2063
BciT130I CCWGG 1 cut(s) 380
BciVI GTATCC 1 cut(s) 508
BcoDI GTCTC 5 cut(s) 295, 359, 1007, 1525, 1841
BfaI CTAG 4 cut(s) 686, 1043, 1490, 1739
BfmI CTRYAG 2 cut(s) 1287, 2055
BfoI RGCGCY 1 cut(s) 681
BfuI GTATCC 1 cut(s) 508
BisI GCNGC 4 cut(s) 991, 1278, 1494, 1968
BlnI CCTAGG 1 cut(s) 1042
BlpI GCTNAGC 2 cut(s) 221, 1076
BlsI GCNGC 4 cut(s) 992, 1279, 1495, 1969
Bme1390I CCNGG 1 cut(s) 380
Bme18I GGWCC 3 cut(s) 514, 1404, 1901
BmgT120I GGNCC 5 cut(s) 514, 936, 1115, 1404, 1901
BmiI GGNNCC 6 cut(s) 516, 679, 938, 968, 1902, 2137
BmrFI CCNGG 1 cut(s) 380
BmrI ACTGGG 1 cut(s) 75
BmsI GCATC 4 cut(s) 234, 327, 1766, 1954
BmtI GCTAGC 1 cut(s) 689
BmuI ACTGGG 1 cut(s) 75
BoxI GACNNNNGTC 1 cut(s) 1206
BpiI GAAGAC 1 cut(s) 1164
BplI GAGNNNNNCTC 6 cut(s) 900, 932, 1069, 1101, 1377, 1409
BpmI CTGGAG 1 cut(s) 760
Bpu1102I GCTNAGC 2 cut(s) 221, 1076
BpuEI CTTGAG 1 cut(s) 657
BsaHI GRCGYC 2 cut(s) 507, 678
BsaI GGTCTC 2 cut(s) 359, 1007
BsaJI CCNNGG 6 cut(s) 502, 1042, 1111, 1407, 1872, 1971
BsaWI WCCGGW 1 cut(s) 764
Bsc4I CCNNNNNNNGG 5 cut(s) 265, 523, 524, 803, 922
Bse1I ACTGG 3 cut(s) 70, 820, 1406
Bse3DI GCAATG 3 cut(s) 423, 1623, 1884
BseBI CCWGG 1 cut(s) 380
BseDI CCNNGG 6 cut(s) 502, 1042, 1111, 1407, 1872, 1971
BseGI GGATG 2 cut(s) 273, 983
BseLI CCNNNNNNNGG 5 cut(s) 265, 523, 524, 803, 922
BseMI GCAATG 3 cut(s) 423, 1623, 1884
BseMII CTCAG 4 cut(s) 588, 1067, 1310, 1455
BseNI ACTGG 3 cut(s) 70, 820, 1406
BsePI GCGCGC 1 cut(s) 1353
BseRI GAGGAG 1 cut(s) 783
BseXI GCAGC 4 cut(s) 1002, 1264, 1505, 1979
Bsh1236I CGCG 2 cut(s) 1355, 1793
BshFI GGCC 4 cut(s) 567, 937, 1116, 1680
BshNI GGYRCC 1 cut(s) 677
BsiHKAI GWGCWC 3 cut(s) 1470, 2045, 2052
BsiSI CCGG 3 cut(s) 765, 1081, 2061
BslFI GGGAC 5 cut(s) 460, 566, 965, 1914, 2002
BslI CCNNNNNNNGG 5 cut(s) 265, 523, 524, 803, 922
BsmAI GTCTC 5 cut(s) 295, 359, 1007, 1525, 1841
BsmFI GGGAC 5 cut(s) 460, 566, 965, 1914, 2002
BsnI GGCC 4 cut(s) 567, 937, 1116, 1680
Bso31I GGTCTC 2 cut(s) 359, 1007
Bsp1286I GDGCHC 3 cut(s) 1470, 2045, 2052
Bsp1407I TGTACA 1 cut(s) 1102
Bsp143I GATC 3 cut(s) 31, 1534, 2135
Bsp1720I GCTNAGC 2 cut(s) 221, 1076
Bsp19I CCATGG 1 cut(s) 1872
BspACI CCGC 3 cut(s) 435, 1994, 2016
BspANI GGCC 4 cut(s) 567, 937, 1116, 1680
BspCNI CTCAG 4 cut(s) 587, 1068, 1311, 1456
BspFNI CGCG 2 cut(s) 1355, 1793
BspHI TCATGA 1 cut(s) 1506
BspLI GGNNCC 6 cut(s) 516, 679, 938, 968, 1902, 2137
BspOI GCTAGC 1 cut(s) 689
BspPI GGATC 3 cut(s) 1542, 2130, 2143
BspT107I GGYRCC 1 cut(s) 677
BspTNI GGTCTC 2 cut(s) 359, 1007
BsrDI GCAATG 3 cut(s) 423, 1623, 1884
BsrGI TGTACA 1 cut(s) 1102
BsrI ACTGG 3 cut(s) 70, 820, 1406
BssECI CCNNGG 6 cut(s) 502, 1042, 1111, 1407, 1872, 1971
BssHII GCGCGC 1 cut(s) 1353
BssMI GATC 3 cut(s) 31, 1534, 2135
BssNI GRCGYC 2 cut(s) 507, 678
BssT1I CCWWGG 4 cut(s) 1042, 1407, 1872, 1971
Bst2UI CCWGG 1 cut(s) 380
Bst4CI ACNGT 5 cut(s) 193, 391, 1472, 1717, 1890
Bst6I CTCTTC 4 cut(s) 114, 421, 575, 2101
BstACI GRCGYC 2 cut(s) 507, 678
BstAUI TGTACA 1 cut(s) 1102
BstC8I GCNNGC 6 cut(s) 687, 995, 1355, 1459, 1482, 2052
BstDEI CTNAG 8 cut(s) 221, 333, 574, 1076, 1178, 1319, 1363, 1464
BstDSI CCRYGG 2 cut(s) 502, 1872
BstF5I GGATG 2 cut(s) 273, 983
BstFNI CGCG 2 cut(s) 1355, 1793
BstH2I RGCGCY 1 cut(s) 681
BstHHI GCGC 3 cut(s) 680, 1355, 1357
BstKTI GATC 3 cut(s) 34, 1537, 2138
BstMAI GTCTC 5 cut(s) 295, 359, 1007, 1525, 1841
BstMBI GATC 3 cut(s) 31, 1534, 2135
BstMWI GCNNNNNNNGC 7 cut(s) 564, 686, 1385, 1490, 1709, 1973, 2022
BstNI CCWGG 1 cut(s) 380
BstNSI RCATGY 4 cut(s) 997, 1309, 1500, 1924
BstPAI GACNNNNGTC 1 cut(s) 1206
BstSCI CCNGG 1 cut(s) 378
BstSFI CTRYAG 2 cut(s) 1287, 2055
BstUI CGCG 2 cut(s) 1355, 1793
BstV1I GCAGC 4 cut(s) 1002, 1264, 1505, 1979
BstV2I GAAGAC 1 cut(s) 1164
BstX2I RGATCY 2 cut(s) 1534, 2135
BstXI CCANNNNNNTGG 3 cut(s) 350, 1607, 1879
BstYI RGATCY 2 cut(s) 1534, 2135
BsuI GTATCC 1 cut(s) 508
BsuRI GGCC 4 cut(s) 567, 937, 1116, 1680
BtgI CCRYGG 2 cut(s) 502, 1872
BtsCI GGATG 2 cut(s) 273, 983
BtsIMutI CAGTG 1 cut(s) 1689
Cac8I GCNNGC 6 cut(s) 687, 995, 1355, 1459, 1482, 2052
CciI TCATGA 1 cut(s) 1506
CfoI GCGC 3 cut(s) 680, 1355, 1357
Cfr13I GGNCC 5 cut(s) 514, 936, 1115, 1404, 1901
CseI GACGC 1 cut(s) 496
Csp6I GTAC 5 cut(s) 167, 633, 823, 1103, 1212
CviQI GTAC 5 cut(s) 167, 633, 823, 1103, 1212
DdeI CTNAG 8 cut(s) 221, 333, 574, 1076, 1178, 1319, 1363, 1464
DinI GGCGCC 1 cut(s) 679
DpnI GATC 3 cut(s) 33, 1536, 2137
DpnII GATC 3 cut(s) 31, 1534, 2135
Eam1104I CTCTTC 4 cut(s) 114, 421, 575, 2101
EarI CTCTTC 4 cut(s) 114, 421, 575, 2101
Ecl136II GAGCTC 1 cut(s) 2043
Eco130I CCWWGG 4 cut(s) 1042, 1407, 1872, 1971
Eco147I AGGCCT 1 cut(s) 1680
Eco24I GRGCYC 1 cut(s) 2045
Eco31I GGTCTC 2 cut(s) 359, 1007
Eco47I GGWCC 3 cut(s) 514, 1404, 1901
Eco53kI GAGCTC 1 cut(s) 2043
Eco57I CTGAAG 2 cut(s) 415, 1998
EcoICRI GAGCTC 1 cut(s) 2043
EcoO109I RGGNCCY 3 cut(s) 514, 1115, 1901
EcoRII CCWGG 1 cut(s) 378
EcoT14I CCWWGG 4 cut(s) 1042, 1407, 1872, 1971
EcoT22I ATGCAT 1 cut(s) 999
EcoT38I GRGCYC 1 cut(s) 2045
EgeI GGCGCC 1 cut(s) 679
EheI GGCGCC 1 cut(s) 679
ErhI CCWWGG 4 cut(s) 1042, 1407, 1872, 1971
FalI AAGNNNNNCTT 2 cut(s) 818, 850
FaqI GGGAC 5 cut(s) 460, 566, 965, 1914, 2002
FauNDI CATATG 1 cut(s) 853
FblI GTMKAC 1 cut(s) 2118
Fnu4HI GCNGC 4 cut(s) 991, 1278, 1494, 1968
FokI GGATG 2 cut(s) 260, 970
FriOI GRGCYC 1 cut(s) 2045
Fsp4HI GCNGC 4 cut(s) 991, 1278, 1494, 1968
FspBI CTAG 4 cut(s) 686, 1043, 1490, 1739
GlaI GCGC 3 cut(s) 679, 1354, 1356
GluI GCNGC 4 cut(s) 991, 1278, 1494, 1968
GsuI CTGGAG 1 cut(s) 760
HaeII RGCGCY 1 cut(s) 681
HaeIII GGCC 4 cut(s) 567, 937, 1116, 1680
HapII CCGG 3 cut(s) 765, 1081, 2061
HgaI GACGC 1 cut(s) 496
HhaI GCGC 3 cut(s) 680, 1355, 1357
Hin1I GRCGYC 2 cut(s) 507, 678
Hin6I GCGC 3 cut(s) 678, 1353, 1355
HinP1I GCGC 3 cut(s) 678, 1353, 1355
HincII GTYRAC 2 cut(s) 189, 2119
HindII GTYRAC 2 cut(s) 189, 2119
HindIII AAGCTT 5 cut(s) 251, 730, 813, 1008, 1980
HinfI GANTC 8 cut(s) 134, 270, 807, 912, 1084, 1218, 1392, 1810
HpaII CCGG 3 cut(s) 765, 1081, 2061
HphI GGTGA 2 cut(s) 205, 220
Hpy166II GTNNAC 4 cut(s) 189, 470, 1819, 2119
Hpy188I TCNGA 5 cut(s) 39, 399, 1112, 1465, 1534
Hpy8I GTNNAC 4 cut(s) 189, 470, 1819, 2119
Hpy99I CGWCG 1 cut(s) 1212
HpyAV CCTTC 7 cut(s) 180, 288, 439, 528, 1153, 1742, 1848
HpyCH4III ACNGT 5 cut(s) 193, 391, 1472, 1717, 1890
HpyCH4IV ACGT 1 cut(s) 1207
HpyCH4V TGCA 8 cut(s) 58, 638, 997, 1068, 1280, 1967, 2082, 2102
HpyF10VI GCNNNNNNNGC 7 cut(s) 564, 686, 1385, 1490, 1709, 1973, 2022
HpyF3I CTNAG 8 cut(s) 221, 333, 574, 1076, 1178, 1319, 1363, 1464
HpySE526I ACGT 1 cut(s) 1207
Hsp92I GRCGYC 2 cut(s) 507, 678
HspAI GCGC 3 cut(s) 678, 1353, 1355
KasI GGCGCC 1 cut(s) 677
Kzo9I GATC 3 cut(s) 31, 1534, 2135
LmnI GCTCC 6 cut(s) 345, 1113, 1385, 1448, 1708, 2048
Lsp1109I GCAGC 4 cut(s) 1002, 1264, 1505, 1979
LweI GCATC 4 cut(s) 234, 327, 1766, 1954
MaeI CTAG 4 cut(s) 686, 1043, 1490, 1739
MaeII ACGT 1 cut(s) 1207
MaeIII GTNAC 1 cut(s) 1373
MalI GATC 3 cut(s) 33, 1536, 2137
MboI GATC 3 cut(s) 31, 1534, 2135
MfeI CAATTG 3 cut(s) 1443, 1846, 1914
MflI RGATCY 2 cut(s) 1534, 2135
MhlI GDGCHC 3 cut(s) 1470, 2045, 2052
MluCI AATT 8 cut(s) 103, 474, 716, 775, 1443, 1846, 1914, 2107
MluI ACGCGT 1 cut(s) 1791
Mly113I GGCGCC 1 cut(s) 678
MlyI GAGTC 3 cut(s) 801, 1078, 1386
MmeI TCCRAC 4 cut(s) 509, 813, 844, 1237
Mph1103I ATGCAT 1 cut(s) 999
MroXI GAANNNNTTC 1 cut(s) 719
MseI TTAA 4 cut(s) 255, 728, 2067, 2143
MslI CAYNNNNRTG 3 cut(s) 245, 1877, 1925
MspA1I CMGCKG 3 cut(s) 435, 1318, 1994
MspI CCGG 3 cut(s) 765, 1081, 2061
MspR9I CCNGG 1 cut(s) 380
MunI CAATTG 3 cut(s) 1443, 1846, 1914
MvaI CCWGG 1 cut(s) 380
MvnI CGCG 2 cut(s) 1355, 1793
MwoI GCNNNNNNNGC 7 cut(s) 564, 686, 1385, 1490, 1709, 1973, 2022
NarI GGCGCC 1 cut(s) 678
NcoI CCATGG 1 cut(s) 1872
NdeI CATATG 1 cut(s) 853
NdeII GATC 3 cut(s) 31, 1534, 2135
NheI GCTAGC 1 cut(s) 685
NlaIV GGNNCC 6 cut(s) 516, 679, 938, 968, 1902, 2137
NmeAIII GCCGAG 1 cut(s) 2064
NsiI ATGCAT 1 cut(s) 999
NspI RCATGY 4 cut(s) 997, 1309, 1500, 1924
PaeI GCATGC 1 cut(s) 997
PagI TCATGA 1 cut(s) 1506
PauI GCGCGC 1 cut(s) 1353
PceI AGGCCT 1 cut(s) 1680
PciI ACATGT 2 cut(s) 1305, 1920
PdmI GAANNNNTTC 1 cut(s) 719
PfeI GAWTC 5 cut(s) 134, 270, 912, 1218, 1810
PflMI CCANNNNNTGG 1 cut(s) 803
PkrI GCNGC 4 cut(s) 992, 1279, 1495, 1969
PleI GAGTC 3 cut(s) 801, 1078, 1386
PluTI GGCGCC 1 cut(s) 681
PpsI GAGTC 3 cut(s) 801, 1078, 1386
PpuMI RGGWCCY 2 cut(s) 514, 1901
PscI ACATGT 2 cut(s) 1305, 1920
PshAI GACNNNNGTC 1 cut(s) 1206
Psp124BI GAGCTC 1 cut(s) 2045
Psp5II RGGWCCY 2 cut(s) 514, 1901
Psp6I CCWGG 1 cut(s) 378
PspGI CCWGG 1 cut(s) 378
PspN4I GGNNCC 6 cut(s) 516, 679, 938, 968, 1902, 2137
PspPI GGNCC 5 cut(s) 514, 936, 1115, 1404, 1901
PspPPI RGGWCCY 2 cut(s) 514, 1901
PsuI RGATCY 2 cut(s) 1534, 2135
PteI GCGCGC 1 cut(s) 1353
PvuII CAGCTG 1 cut(s) 1318
RsaI GTAC 5 cut(s) 168, 634, 824, 1104, 1213
RsaNI GTAC 5 cut(s) 167, 633, 823, 1103, 1212
RseI CAYNNNNRTG 3 cut(s) 245, 1877, 1925
SacI GAGCTC 1 cut(s) 2045
SalI GTCGAC 1 cut(s) 2117
SaqAI TTAA 4 cut(s) 255, 728, 2067, 2143
SatI GCNGC 4 cut(s) 991, 1278, 1494, 1968
Sau3AI GATC 3 cut(s) 31, 1534, 2135
Sau96I GGNCC 5 cut(s) 514, 936, 1115, 1404, 1901
SchI GAGTC 3 cut(s) 801, 1078, 1386
ScrFI CCNGG 1 cut(s) 380
SduI GDGCHC 3 cut(s) 1470, 2045, 2052
SfaNI GCATC 4 cut(s) 234, 327, 1766, 1954
SfcI CTRYAG 2 cut(s) 1287, 2055
SfoI GGCGCC 1 cut(s) 679
SinI GGWCC 3 cut(s) 514, 1404, 1901
SmiMI CAYNNNNRTG 3 cut(s) 245, 1877, 1925
SmlI CTYRAG 1 cut(s) 672
SmoI CTYRAG 1 cut(s) 672
SphI GCATGC 1 cut(s) 997
Sse9I AATT 8 cut(s) 103, 474, 716, 775, 1443, 1846, 1914, 2107
SseBI AGGCCT 1 cut(s) 1680
SsiI CCGC 3 cut(s) 435, 1994, 2016
SspDI GGCGCC 1 cut(s) 677
SspMI CTAG 4 cut(s) 686, 1043, 1490, 1739
SstI GAGCTC 1 cut(s) 2045
StuI AGGCCT 1 cut(s) 1680
StyD4I CCNGG 1 cut(s) 378
StyI CCWWGG 4 cut(s) 1042, 1407, 1872, 1971
TaaI ACNGT 5 cut(s) 193, 391, 1472, 1717, 1890
TaiI ACGT 1 cut(s) 1210
TaqI TCGA 3 cut(s) 1523, 1723, 2118
TasI AATT 8 cut(s) 103, 474, 716, 775, 1443, 1846, 1914, 2107
TatI WGTACW 2 cut(s) 822, 1102
TfiI GAWTC 5 cut(s) 134, 270, 912, 1218, 1810
Tru1I TTAA 4 cut(s) 255, 728, 2067, 2143
Tru9I TTAA 4 cut(s) 255, 728, 2067, 2143
TscAI CASTG 1 cut(s) 1696
TseI GCWGC 4 cut(s) 990, 1277, 1493, 1967
TspDTI ATGAA 7 cut(s) 132, 147, 229, 263, 1526, 1849, 2099
TspGWI ACGGA 2 cut(s) 867, 2035
TspRI CASTG 1 cut(s) 1696
Van91I CCANNNNNTGG 1 cut(s) 803
VpaK11BI GGWCC 3 cut(s) 514, 1404, 1901
XapI RAATTY 2 cut(s) 103, 716
XceI RCATGY 4 cut(s) 997, 1309, 1500, 1924
XmaJI CCTAGG 1 cut(s) 1042
XmiI GTMKAC 1 cut(s) 2118
XmnI GAANNNNTTC 1 cut(s) 719
XspI CTAG 4 cut(s) 686, 1043, 1490, 1739
Zsp2I ATGCAT 1 cut(s) 999
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.