Rw7G000230

Transporter

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
OG0009787
Physical Location & Seq
Forward (+)
224751 .. 227308
2558 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G000230.1

Sequence Viewer

Length: 2064 bp
ATGTCTCAAGAGTACCAAAAACCGGAACAAGTAGACGAGGATCCGAACCAGAAGAGGAAGCGCGGCAAGGAAGATCATGAGGAGGAGGAGGAGGAGGAAGAAGGAGAGGTGCTATCGGTGGAAAGGCTGTTCGCAAAGCTAGAAGTGCCGTCATGGACGAGGCAGCTGACGTTCCGAGCATTCATAATAAGCGGCCTGCTGAGTGTGCTGTTCAGCGTGATCGTGATGAAGCTGAACCTGACGACCGGTATCATACCATCTCTGAACGTGTCGGCGGGGCTGTTGGGTTTCTTCTTCGTGAGCACTTGGACCAAGATCCTGGGCAAAGCAGGCTTCTTGGCCCAGCCCTTCACCAGGCAAGAGAACACCGTCATCCAGACCTGCATCGTTGCTTCCTCCGGCATCGCCTTCAGCGGAGCCCAATCTAGTGACACCGGTGATACCAAGAACCCAGGTTTGCTGTGGATTATTGGCTTTCTCTTTGTTGTCAGCTTCCTCGGCCTCTTCTCAGTCGTGCCTCTTCGAAAGATTATGATCATAGACTTCAAATTGACATATCCCAGTGGTACTGCAACTGCTCTTCTCATCAACAGTTTCCACACTCCTGCAGGAGCCAAGCTAGCAAAGAAACAAGTGAAGGAGTTGGGAAAATTCTTCTCTTTCAGTTTCTTGTGGGGTTTCTTTCAATGGTTCTATACTGCCGGAGATGACTGCGGATTTTCAAACTTCCCTTCACTCGGTCTCAAAGCATATCAGAATAAGTTTTACTTCGACTTCTCAGCAACATATGTTGGAGTAGGGATGATTTGCCCCTACATTGTAAACATATCGGTGCTTCTTGGAGGCATTATTTCTTGGGGTTTGATGTGGCCTCTCATATGGAATAAGAGGGGTGATTGGTATAACGCAGAGCTTAGCCCAAAAAGCATGAATGGCCTTCAAGCTTACAAGGTCTTCATTGCCATTGCCCTGATCCTTGGTGACGGACTATACAACTTCTTCAAGGTGCTAGGTCGAACTCTCTCTGCCTTGTATGTTCAACTCCGACAAAAAGATGTGAGTGGCATTCTTCCAGTGGCAGATCAAGCCTCTCCTGTAAGCTTGGAGCAGCTCTCTTATGATGACCAGCGCCGAACCCGACTCTTTCTCAAAGACCAAATTCCAGCATGGTTTGCTGCTGCAGGCTATGTTGGAATTGCTGCTATCTCCATAGCCACTGTACCACACATATTTCCCCAACTTAAGTGGTATTATATATTGGTCATCTACCTCATTGCACCCACCTTGGCTTTCTGTAATGCATATGGGTGTGGGCTCACTGATTGGTCCCTCGCATCCACATATGGAAAGGTCGCCATCTTTACCATTGGGGCATGGGCAGGTTCCTCCCACGGTGGTGTTATTGCAGGACTAGCAGCTTGTGGAGTCATGATGAACATCGTTGCAACAGCTTCTGATTTAACCCAAGATTTCAAGACCGGCTACCTAACCTTGTCTTCTCCCCGATCAATGTTTGTAAGCCAAATTATTGGGACAGCAATGGGTTGTGTGATTTCTCCATGTGTGTTTTGGCTCTTCTATAAGGCCTTCCCTGACCTGGGCAATCCCAACAGTGCATATCCTGCTCCCTATGCTGTTGTGTACCGTAACATGGCTATTTTGGCGGTAGAAGGTCTTGATTATCTGCCTAAGAATTGCATCTTGCTTTGTGGCGTGTTCTTTGGTGCAGCCATTCTTATAAACCTGATAAAGGATTGCATTGGTAAGAAGAAGGCACGCTTCATTCCACTACCAATGGCAATGGCTATACCTTTCTATATAGGGCCATATTTTGCGATTGATATGTGCCTTGGTAGTGTGATCAAGTTTGTGTGGGAGAAGATAAACAAGACCAAGGCAGATGCTTTTGTACCTGCAGTGGCTTCTGGTATGATCTGTGGGGATGGGGTTTGGACTTTGCCTGCTTCAATACTCGCCCTAGCAGGGGTCAAGCCACCAATTTGCATGAAGTTCTTGTCAAGGTCAGATAATGCTAGGGTTGATAAATTCTTAGGGAGATCCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0008150 GO:0016020 GO:0022857 GO:0044464 GO:0051179 GO:0051234 GO:0055085 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
OPT

Protein Analysis

687

Amino Acids

75.54

Weight (kDa)

8.84

Isoelectric Point (pI)

35.41

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
OPT PF03169 55 - 658 9.7e-161 OPT oligopeptide transporter protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1739
Acc36I ACCTGC 3 cut(s) 389, 1370, 1921
AccI GTMKAC 1 cut(s) 33
AccII CGCG 1 cut(s) 63
AciI CCGC 6 cut(s) 63, 192, 275, 414, 714, 1664
AclWI GGATC 5 cut(s) 35, 48, 310, 967, 2052
AcsI RAATTY 3 cut(s) 650, 1158, 2045
AcuI CTGAAG 1 cut(s) 394
AfaI GTAC 5 cut(s) 14, 568, 1221, 1643, 1911
AfiI CCNNNNNNNGG 9 cut(s) 22, 354, 737, 1597, 1598, 1651, 1750, 1983, 1984
AflII CTTAAG 1 cut(s) 1241
AflIII ACRYGT 1 cut(s) 267
AgeI ACCGGT 2 cut(s) 245, 434
AgsI TTSAA 8 cut(s) 547, 686, 723, 941, 1003, 1040, 1474, 1968
AjnI CCWGG 4 cut(s) 318, 353, 451, 1596
AleI CACNNNNGTG 1 cut(s) 1395
AloI GAACNNNNNNTCC 2 cut(s) 113, 145
Alw21I GWGCWC 1 cut(s) 305
Alw26I GTCTC 2 cut(s) 9, 746
AlwI GGATC 5 cut(s) 35, 48, 310, 967, 2052
AlwNI CAGNNNCTG 1 cut(s) 1454
AoxI GGCC 7 cut(s) 193, 339, 499, 869, 934, 1584, 1823
ApeKI GCWGC 7 cut(s) 163, 1108, 1175, 1178, 1199, 1415, 1727
ApoI RAATTY 3 cut(s) 650, 1158, 2045
AsiGI ACCGGT 2 cut(s) 245, 434
AspLEI GCGC 2 cut(s) 63, 1131
AspS9I GGNCC 4 cut(s) 309, 340, 1326, 1823
AsuHPI GGTGA 4 cut(s) 343, 449, 905, 992
AsuII TTCGAA 1 cut(s) 523
AsuNHI GCTAGC 1 cut(s) 619
AvaII GGWCC 2 cut(s) 309, 1326
BamHI GGATCC 1 cut(s) 40
BanII GRGCYC 2 cut(s) 421, 1317
BbsI GAAGAC 2 cut(s) 946, 1488
Bbv12I GWGCWC 1 cut(s) 305
BbvI GCAGC 7 cut(s) 175, 1120, 1162, 1165, 1186, 1427, 1739
BccI CCATC 3 cut(s) 265, 1364, 1937
BceAI ACGGC 1 cut(s) 133
BciT130I CCWGG 4 cut(s) 320, 355, 453, 1598
BclI TGATCA 2 cut(s) 534, 1860
BcoDI GTCTC 2 cut(s) 9, 746
BfaI CTAG 7 cut(s) 140, 426, 620, 1010, 1412, 1979, 2034
BfmI CTRYAG 3 cut(s) 606, 1179, 1914
BfoI RGCGCY 1 cut(s) 1132
BfrI CTTAAG 1 cut(s) 1241
BfuAI ACCTGC 3 cut(s) 389, 1370, 1921
BisI GCNGC 9 cut(s) 64, 164, 193, 1109, 1176, 1179, 1200, 1416, 1728
BlpI GCTNAGC 1 cut(s) 914
BlsI GCNGC 9 cut(s) 65, 165, 194, 1110, 1177, 1180, 1201, 1417, 1729
Bme1390I CCNGG 4 cut(s) 320, 355, 453, 1598
Bme18I GGWCC 2 cut(s) 309, 1326
BmgT120I GGNCC 4 cut(s) 309, 340, 1326, 1823
BmiI GGNNCC 5 cut(s) 42, 418, 613, 1328, 1384
BmrFI CCNGG 4 cut(s) 320, 355, 453, 1598
BmrI ACTGGG 1 cut(s) 555
BmsI GCATC 5 cut(s) 393, 411, 1343, 1707, 1891
BmtI GCTAGC 1 cut(s) 623
BmuI ACTGGG 1 cut(s) 555
BpiI GAAGAC 2 cut(s) 946, 1488
BplI GAGNNNNNCTC 2 cut(s) 1097, 1129
Bpu1102I GCTNAGC 1 cut(s) 914
Bpu14I TTCGAA 1 cut(s) 523
BsaBI GATNNNNATC 2 cut(s) 533, 1436
BsaI GGTCTC 1 cut(s) 746
BsaJI CCNNGG 9 cut(s) 319, 451, 496, 976, 1284, 1390, 1597, 1849, 1893
BsaWI WCCGGW 3 cut(s) 22, 245, 434
Bsc4I CCNNNNNNNGG 9 cut(s) 22, 354, 737, 1597, 1598, 1651, 1750, 1983, 1984
Bse118I RCCGGY 3 cut(s) 245, 434, 1478
Bse1I ACTGG 2 cut(s) 561, 1073
Bse3DI GCAATG 5 cut(s) 957, 963, 1272, 1545, 1806
Bse8I GATNNNNATC 2 cut(s) 533, 1436
BseBI CCWGG 4 cut(s) 320, 355, 453, 1598
BseDI CCNNGG 9 cut(s) 319, 451, 496, 976, 1284, 1390, 1597, 1849, 1893
BseGI GGATG 4 cut(s) 372, 807, 1334, 1948
BseJI GATNNNNATC 2 cut(s) 533, 1436
BseLI CCNNNNNNNGG 9 cut(s) 22, 354, 737, 1597, 1598, 1651, 1750, 1983, 1984
BseMI GCAATG 5 cut(s) 957, 963, 1272, 1545, 1806
BseMII CTCAG 3 cut(s) 191, 522, 792
BseNI ACTGG 2 cut(s) 561, 1073
BseRI GAGGAG 5 cut(s) 95, 98, 101, 104, 107
BseXI GCAGC 7 cut(s) 175, 1120, 1162, 1165, 1186, 1427, 1739
BseYI CCCAGC 1 cut(s) 342
BsgI GTGCAG 1 cut(s) 1746
Bsh1236I CGCG 1 cut(s) 63
Bsh1285I CGRYCG 1 cut(s) 246
BshFI GGCC 7 cut(s) 195, 341, 501, 871, 936, 1586, 1825
BshTI ACCGGT 2 cut(s) 245, 434
BsiEI CGRYCG 1 cut(s) 246
BsiHKAI GWGCWC 1 cut(s) 305
BsiSI CCGG 6 cut(s) 23, 246, 399, 435, 702, 1479
BslFI GGGAC 2 cut(s) 1312, 1546
BslI CCNNNNNNNGG 9 cut(s) 22, 354, 737, 1597, 1598, 1651, 1750, 1983, 1984
BsmAI GTCTC 2 cut(s) 9, 746
BsmFI GGGAC 2 cut(s) 1312, 1546
BsmI GAATGC 2 cut(s) 179, 1065
BsnI GGCC 7 cut(s) 195, 341, 501, 871, 936, 1586, 1825
Bso31I GGTCTC 1 cut(s) 746
Bsp119I TTCGAA 1 cut(s) 523
Bsp1286I GDGCHC 3 cut(s) 305, 421, 1317
Bsp1720I GCTNAGC 1 cut(s) 914
BspACI CCGC 6 cut(s) 63, 192, 275, 414, 714, 1664
BspANI GGCC 7 cut(s) 195, 341, 501, 871, 936, 1586, 1825
BspCNI CTCAG 3 cut(s) 192, 521, 791
BspFNI CGCG 1 cut(s) 63
BspHI TCATGA 2 cut(s) 76, 1428
BspLI GGNNCC 5 cut(s) 42, 418, 613, 1328, 1384
BspMAI CTGCAG 3 cut(s) 610, 1183, 1918
BspMI ACCTGC 3 cut(s) 389, 1370, 1921
BspOI GCTAGC 1 cut(s) 623
BspPI GGATC 5 cut(s) 35, 48, 310, 967, 2052
BspQI GCTCTTC 2 cut(s) 585, 1580
BspT104I TTCGAA 1 cut(s) 523
BspTI CTTAAG 1 cut(s) 1241
BspTNI GGTCTC 1 cut(s) 746
BsrDI GCAATG 5 cut(s) 957, 963, 1272, 1545, 1806
BsrFI RCCGGY 3 cut(s) 245, 434, 1478
BsrI ACTGG 2 cut(s) 561, 1073
BssAI RCCGGY 3 cut(s) 245, 434, 1478
BssECI CCNNGG 9 cut(s) 319, 451, 496, 976, 1284, 1390, 1597, 1849, 1893
BssT1I CCWWGG 4 cut(s) 976, 1284, 1849, 1893
Bst2UI CCWGG 4 cut(s) 320, 355, 453, 1598
Bst4CI ACNGT 6 cut(s) 370, 593, 1219, 1394, 1613, 1646
Bst6I CTCTTC 5 cut(s) 47, 509, 525, 585, 1580
BstAFI CTTAAG 1 cut(s) 1241
BstAPI GCANNNNNTGC 2 cut(s) 1172, 1622
BstBI TTCGAA 1 cut(s) 523
BstC8I GCNNGC 6 cut(s) 197, 331, 621, 1183, 1777, 1962
BstDEI CTNAG 6 cut(s) 200, 508, 778, 914, 1689, 2050
BstDSI CCRYGG 1 cut(s) 1390
BstENI CCTNNNNNAGG 2 cut(s) 352, 1748
BstF5I GGATG 4 cut(s) 372, 807, 1334, 1948
BstFNI CGCG 1 cut(s) 63
BstH2I RGCGCY 1 cut(s) 1132
BstHHI GCGC 2 cut(s) 63, 1131
BstMAI GTCTC 2 cut(s) 9, 746
BstMCI CGRYCG 1 cut(s) 246
BstNI CCWGG 4 cut(s) 320, 355, 453, 1598
BstSCI CCNGG 4 cut(s) 318, 353, 451, 1596
BstSFI CTRYAG 3 cut(s) 606, 1179, 1914
BstUI CGCG 1 cut(s) 63
BstV1I GCAGC 7 cut(s) 175, 1120, 1162, 1165, 1186, 1427, 1739
BstV2I GAAGAC 2 cut(s) 946, 1488
BstX2I RGATCY 3 cut(s) 40, 315, 2057
BstXI CCANNNNNNTGG 2 cut(s) 319, 1529
BstYI RGATCY 3 cut(s) 40, 315, 2057
BsuRI GGCC 7 cut(s) 195, 341, 501, 871, 936, 1586, 1825
BtgI CCRYGG 1 cut(s) 1390
BtgZI GCGATG 1 cut(s) 388
BtsCI GGATG 4 cut(s) 372, 807, 1334, 1948
BtsI GCAGTG 1 cut(s) 1923
BtsIMutI CAGTG 6 cut(s) 568, 1080, 1215, 1317, 1618, 1923
BveI ACCTGC 3 cut(s) 389, 1370, 1921
Cac8I GCNNGC 6 cut(s) 197, 331, 621, 1183, 1777, 1962
CaiI CAGNNNCTG 1 cut(s) 1454
CciI TCATGA 2 cut(s) 76, 1428
CfoI GCGC 2 cut(s) 63, 1131
Cfr10I RCCGGY 3 cut(s) 245, 434, 1478
Cfr13I GGNCC 4 cut(s) 309, 340, 1326, 1823
Csp6I GTAC 5 cut(s) 13, 567, 1220, 1642, 1910
CspAI ACCGGT 2 cut(s) 245, 434
CspCI CAANNNNNGTGG 2 cut(s) 1226, 1261
CviAII CATG 9 cut(s) 77, 153, 928, 1167, 1374, 1429, 1560, 1651, 2005
CviQI GTAC 5 cut(s) 13, 567, 1220, 1642, 1910
DdeI CTNAG 6 cut(s) 200, 508, 778, 914, 1689, 2050
Eam1104I CTCTTC 5 cut(s) 47, 509, 525, 585, 1580
EarI CTCTTC 5 cut(s) 47, 509, 525, 585, 1580
Eco130I CCWWGG 4 cut(s) 976, 1284, 1849, 1893
Eco147I AGGCCT 1 cut(s) 1586
Eco24I GRGCYC 2 cut(s) 421, 1317
Eco31I GGTCTC 1 cut(s) 746
Eco47I GGWCC 2 cut(s) 309, 1326
Eco57I CTGAAG 1 cut(s) 394
EcoNI CCTNNNNNAGG 2 cut(s) 352, 1748
EcoRII CCWGG 4 cut(s) 318, 353, 451, 1596
EcoT14I CCWWGG 4 cut(s) 976, 1284, 1849, 1893
EcoT22I ATGCAT 1 cut(s) 1303
EcoT38I GRGCYC 2 cut(s) 421, 1317
ErhI CCWWGG 4 cut(s) 976, 1284, 1849, 1893
FaeI CATG 9 cut(s) 80, 156, 931, 1170, 1377, 1432, 1563, 1654, 2008
FalI AAGNNNNNCTT 4 cut(s) 752, 784, 1763, 1795
FaqI GGGAC 2 cut(s) 1312, 1546
FatI CATG 9 cut(s) 76, 152, 927, 1166, 1373, 1428, 1559, 1650, 2004
FauI CCCGC 1 cut(s) 268
FauNDI CATATG 4 cut(s) 787, 878, 1303, 1342
FbaI TGATCA 2 cut(s) 534, 1860
FblI GTMKAC 1 cut(s) 33
Fnu4HI GCNGC 9 cut(s) 64, 164, 193, 1109, 1176, 1179, 1200, 1416, 1728
FokI GGATG 4 cut(s) 359, 814, 1321, 1955
FriOI GRGCYC 2 cut(s) 421, 1317
Fsp4HI GCNGC 9 cut(s) 64, 164, 193, 1109, 1176, 1179, 1200, 1416, 1728
FspBI CTAG 7 cut(s) 140, 426, 620, 1010, 1412, 1979, 2034
GlaI GCGC 2 cut(s) 62, 1130
GluI GCNGC 9 cut(s) 64, 164, 193, 1109, 1176, 1179, 1200, 1416, 1728
GsaI CCCAGC 1 cut(s) 346
HaeII RGCGCY 1 cut(s) 1132
HaeIII GGCC 7 cut(s) 195, 341, 501, 871, 936, 1586, 1825
HapII CCGG 6 cut(s) 23, 246, 399, 435, 702, 1479
HhaI GCGC 2 cut(s) 63, 1131
Hin1II CATG 9 cut(s) 80, 156, 931, 1170, 1377, 1432, 1563, 1654, 2008
Hin6I GCGC 2 cut(s) 61, 1129
HinP1I GCGC 2 cut(s) 61, 1129
HindIII AAGCTT 2 cut(s) 942, 1099
HinfI GANTC 2 cut(s) 1140, 1425
HpaII CCGG 6 cut(s) 23, 246, 399, 435, 702, 1479
HphI GGTGA 4 cut(s) 343, 449, 905, 992
Hpy166II GTNNAC 3 cut(s) 34, 823, 1642
Hpy188I TCNGA 7 cut(s) 45, 176, 264, 756, 1046, 1456, 2026
Hpy188III TCNNGA 8 cut(s) 8, 77, 223, 298, 376, 1429, 1474, 1676
Hpy8I GTNNAC 3 cut(s) 34, 823, 1642
HpyAV CCTTC 9 cut(s) 95, 358, 418, 631, 741, 947, 1597, 1664, 1765
HpyCH4III ACNGT 6 cut(s) 370, 593, 1219, 1394, 1613, 1646
HpyCH4IV ACGT 2 cut(s) 170, 267
HpyF3I CTNAG 6 cut(s) 200, 508, 778, 914, 1689, 2050
HpySE526I ACGT 2 cut(s) 170, 267
Hsp92II CATG 9 cut(s) 80, 156, 931, 1170, 1377, 1432, 1563, 1654, 2008
HspAI GCGC 2 cut(s) 61, 1129
Ksp22I TGATCA 2 cut(s) 534, 1860
LguI GCTCTTC 2 cut(s) 585, 1580
LmnI GCTCC 4 cut(s) 416, 611, 1105, 1630
Lsp1109I GCAGC 7 cut(s) 175, 1120, 1162, 1165, 1186, 1427, 1739
LweI GCATC 5 cut(s) 393, 411, 1343, 1707, 1891
MaeI CTAG 7 cut(s) 140, 426, 620, 1010, 1412, 1979, 2034
MaeII ACGT 2 cut(s) 170, 267
MaeIII GTNAC 3 cut(s) 428, 980, 1646
MflI RGATCY 3 cut(s) 40, 315, 2057
MhlI GDGCHC 3 cut(s) 305, 421, 1317
MluCI AATT 8 cut(s) 548, 650, 1158, 1194, 1524, 1693, 1998, 2045
MlyI GAGTC 2 cut(s) 1134, 1434
MmeI TCCRAC 3 cut(s) 772, 1069, 1171
Mph1103I ATGCAT 1 cut(s) 1303
MseI TTAA 2 cut(s) 1242, 1460
MslI CAYNNNNRTG 3 cut(s) 830, 1306, 1395
MspA1I CMGCKG 2 cut(s) 166, 414
MspCI CTTAAG 1 cut(s) 1241
MspI CCGG 6 cut(s) 23, 246, 399, 435, 702, 1479
MspR9I CCNGG 4 cut(s) 320, 355, 453, 1598
Mva1269I GAATGC 2 cut(s) 179, 1065
MvaI CCWGG 4 cut(s) 320, 355, 453, 1598
MvnI CGCG 1 cut(s) 63
NdeI CATATG 4 cut(s) 787, 878, 1303, 1342
NheI GCTAGC 1 cut(s) 619
NlaIII CATG 9 cut(s) 80, 156, 931, 1170, 1377, 1432, 1563, 1654, 2008
NlaIV GGNNCC 5 cut(s) 42, 418, 613, 1328, 1384
NmeAIII GCCGAG 1 cut(s) 477
NmuCI GTSAC 2 cut(s) 428, 980
NsiI ATGCAT 1 cut(s) 1303
NspV TTCGAA 1 cut(s) 523
OliI CACNNNNGTG 1 cut(s) 1395
PagI TCATGA 2 cut(s) 76, 1428
PceI AGGCCT 1 cut(s) 1586
PciSI GCTCTTC 2 cut(s) 585, 1580
PctI GAATGC 2 cut(s) 179, 1065
PinAI ACCGGT 2 cut(s) 245, 434
PkrI GCNGC 9 cut(s) 65, 165, 194, 1110, 1177, 1180, 1201, 1417, 1729
PleI GAGTC 2 cut(s) 1134, 1433
PpsI GAGTC 2 cut(s) 1134, 1433
PsiI TTATAA 1 cut(s) 1739
Psp6I CCWGG 4 cut(s) 318, 353, 451, 1596
PspFI CCCAGC 1 cut(s) 342
PspGI CCWGG 4 cut(s) 318, 353, 451, 1596
PspN4I GGNNCC 5 cut(s) 42, 418, 613, 1328, 1384
PspPI GGNCC 4 cut(s) 309, 340, 1326, 1823
PstI CTGCAG 3 cut(s) 610, 1183, 1918
PstNI CAGNNNCTG 1 cut(s) 1454
PsuI RGATCY 3 cut(s) 40, 315, 2057
PvuII CAGCTG 1 cut(s) 166
RsaI GTAC 5 cut(s) 14, 568, 1221, 1643, 1911
RsaNI GTAC 5 cut(s) 13, 567, 1220, 1642, 1910
RseI CAYNNNNRTG 3 cut(s) 830, 1306, 1395
SapI GCTCTTC 2 cut(s) 585, 1580
SaqAI TTAA 2 cut(s) 1242, 1460
SatI GCNGC 9 cut(s) 64, 164, 193, 1109, 1176, 1179, 1200, 1416, 1728
Sau96I GGNCC 4 cut(s) 309, 340, 1326, 1823
SbfI CCTGCAGG 1 cut(s) 610
SchI GAGTC 2 cut(s) 1134, 1434
ScrFI CCNGG 4 cut(s) 320, 355, 453, 1598
SdaI CCTGCAGG 1 cut(s) 610
SduI GDGCHC 3 cut(s) 305, 421, 1317
SfaNI GCATC 5 cut(s) 393, 411, 1343, 1707, 1891
SfcI CTRYAG 3 cut(s) 606, 1179, 1914
SfuI TTCGAA 1 cut(s) 523
SgrAI CRCCGGYG 1 cut(s) 434
SinI GGWCC 2 cut(s) 309, 1326
SmiMI CAYNNNNRTG 3 cut(s) 830, 1306, 1395
SmlI CTYRAG 2 cut(s) 6, 1241
SmoI CTYRAG 2 cut(s) 6, 1241
Sse8387I CCTGCAGG 1 cut(s) 610
Sse9I AATT 8 cut(s) 548, 650, 1158, 1194, 1524, 1693, 1998, 2045
SseBI AGGCCT 1 cut(s) 1586
SsiI CCGC 6 cut(s) 63, 192, 275, 414, 714, 1664
SspMI CTAG 7 cut(s) 140, 426, 620, 1010, 1412, 1979, 2034
StuI AGGCCT 1 cut(s) 1586
StyD4I CCNGG 4 cut(s) 318, 353, 451, 1596
StyI CCWWGG 4 cut(s) 976, 1284, 1849, 1893
TaaI ACNGT 6 cut(s) 370, 593, 1219, 1394, 1613, 1646
TaiI ACGT 2 cut(s) 173, 270
TaqI TCGA 3 cut(s) 523, 771, 1015
TaqII GACCGA 1 cut(s) 728
TasI AATT 8 cut(s) 548, 650, 1158, 1194, 1524, 1693, 1998, 2045
TauI GCSGC 2 cut(s) 66, 195
Tru1I TTAA 2 cut(s) 1242, 1460
Tru9I TTAA 2 cut(s) 1242, 1460
TscAI CASTG 6 cut(s) 568, 1080, 1222, 1324, 1618, 1923
TseFI GTSAC 2 cut(s) 428, 980
TseI GCWGC 7 cut(s) 163, 1108, 1175, 1178, 1199, 1415, 1727
Tsp45I GTSAC 2 cut(s) 428, 980
TspDTI ATGAA 7 cut(s) 172, 242, 944, 946, 1448, 1771, 2021
TspGWI ACGGA 1 cut(s) 999
TspRI CASTG 6 cut(s) 568, 1080, 1222, 1324, 1618, 1923
Vha464I CTTAAG 1 cut(s) 1241
VpaK11BI GGWCC 2 cut(s) 309, 1326
XagI CCTNNNNNAGG 2 cut(s) 352, 1748
XapI RAATTY 3 cut(s) 650, 1158, 2045
XcmI CCANNNNNNNNNTGG 2 cut(s) 459, 1566
XmiI GTMKAC 1 cut(s) 33
XspI CTAG 7 cut(s) 140, 426, 620, 1010, 1412, 1979, 2034
Zsp2I ATGCAT 1 cut(s) 1303
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.