Rh7DG002900

Transporter

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7D
OG0009787
Physical Location & Seq
Forward (+)
292144 .. 295322
3179 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7DG002900.1

Sequence Viewer

Length: 2097 bp
ATGTCTCAAGAGTACCAAAAACCGGAACAAGTAGACGAGGATCCGAACCAGAAGAGGAAGCGCGGCAAGGAAGAGGAGGAGGAGGAGGAAGAAGGAGAGGTGCTATCGGTGGAAAGGCTGTTCGCAAAGCAAGAAGTGCCGTCATGGACGAGGCAGCTGACGTTCCGAGCATTCATAATAAGCGGCCTGCTGAGTGTGCTGTTCAGCGTGATCGTGATGAAGCTGAACCTGACGACCGGTATCATACCATCTCTGAACGTGTCGGCGGGGCTGTTGGGTTTCTTCTTCGTGAGCACTTGGACCAAGATCCTGGGCAAAGCAGGCTTCTTGACCCAGCCCTTCACCAGGCAAGAGAACACCGTCATCCAGACCTGCATCGTTGCTTCCTCCGGCATCGCCTTCAGCGGAGGTTTCGGCAGCTATCTCTTTGGTATGAGTAGTCGAATCGCAGCCCAATCTAGTGACGCCGGTGATACCAAGAACCCAGGTTTGCTGTGGATTATTGGCTTTCTCTTTGTTGTCAGCTTCCTCGGCCTCTTCTCAGTCGTGCCTCTTCGAAAGATTATGATCATAGACTTCAAATTGACATATCCCAGTGGTACTGCAACTGCTCTTCTCATCAACAGTTTCCACACTCCTGCAGGAGTCAAGCTAGCAAAGAAACAAGTGAAGGAGTTGGGAAAATTCTTCTCTTTCAGTTTCTTGTGGGGTTTCTTTCAATGGTTCTATACTGCCGAAAATGACTGCGGATTTTCAAACTTCCCTTCACTCGGTCTTAAAGCATATCAGAACATGTTTTTCTTCGACTTCTCAGCAACATATGTTGGAGTAGGGATGATTTGCCCCTACATTGTAAACATATCGGTGCTTCTTGGAGGCATTATTTCTTGGGGTTTGATGTGGCCTCTCATATGGAATAAGAGGGGTGATTGGTATAAAGCAGAGCTCAGCCCAAAAAGCATGGATGGCCTTCAAGCTTACAAGGTCTTCATTGCCATTGCCATGATCCTTGGTGACGGACTATACAACTTCTTCAAGGTGCTAGGTCGAACTCTCTCTGCCTTGTATGTTCAACTCCGACAAAAAGATGTGAGGGGCATTCTTCCAGTGGCAGATCAAGCCTCTCCTGTAAGCTTGGAGCAGCTATCTTATGATGACCAGCGCCGAACCCAACTCTTTCTCAAAGACCAAATTCCAGCATGGTTTGCTGCTGCAGGCTATGTTGGAATTGCTGCAATCTCCATAGCCACTGTACCACACATATTTCCCCAACTTAAATGGTATTATATATTGGTCATCTACCTCATTGCACCCACCTTGGCTTTCTGTAATGCATATGGGTGTGGGCTCACTGATTGGTCCCTGGCATCCACTTATGGAAAGGTTGCCATCTTTACCATTGGGGCATGGGCCGGTTCCTCCCACGGTGGTGTTATTGCAGGACTAGCAGCTTGTGGAGTCATGATGAACATCGTTTCAACAGCTTCTGATTTGACCCAAGATTTCAAGACCGGCTACCTAACCTTGGCTTCTCCCCGATCAATGTTTGTGAGCCAAATTATTGGGACAGCAATGGGTTGTGTGATTTCTCCAAGTGTGTTCTGGCTCTTCTATAAGGCCTTCCCCAACCTGGGCAATCCCGACAGTGCATATCCTGCTCCCTTGGCTGTTGTGTACCGTAACATGGCTATTTTGGCGACAGAAGGTCTTGACTCTCTGCCGAAGAATTGCCTCTTGCTTTGTGGCGTGTTCTTTGGTGCAGCCATTCTTATAAACCTGATAAAGGATTGCATTGGTAAGCAGAAGGCACGCTTCATTCCACTACCAATGGCAATGGCTATACCTTTCTATATAGGGTCATATTTTGCAATTGATATGTGCATTGGGAGCGTGATCAGGTTTGTGTGGGAGAAGATAAACAAGGCCAAGGCAGATGCTTTCGTACCTGCAGTGGCTTCTGGTATGATCTGTGGGGATGGGATTTGGACTTTGCCTGCTTCAATACTCGCCCTTGCAGGGGTCAAGCCACCAATTTGCATGAAGTTCTTGTCAAGGGCAGATAATACTAGGGTTGATAAATTCTTAAAGGGATCCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0008150 GO:0016020 GO:0022857 GO:0044464 GO:0051179 GO:0051234 GO:0055085 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
OPT

Protein Analysis

698

Amino Acids

76.66

Weight (kDa)

8.93

Isoelectric Point (pI)

35.46

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
OPT PF03169 52 - 669 7.6e-163 OPT oligopeptide transporter protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1772
Acc36I ACCTGC 2 cut(s) 380, 1954
AccI GTMKAC 1 cut(s) 33
AccII CGCG 1 cut(s) 63
AciI CCGC 5 cut(s) 63, 183, 266, 405, 747
AclWI GGATC 5 cut(s) 35, 48, 301, 1000, 2085
AcsI RAATTY 3 cut(s) 683, 1191, 2078
AcuI CTGAAG 1 cut(s) 385
AcyI GRCGYC 1 cut(s) 465
AfaI GTAC 5 cut(s) 14, 601, 1254, 1676, 1944
AflIII ACRYGT 2 cut(s) 258, 792
AgeI ACCGGT 1 cut(s) 236
AgsI TTSAA 9 cut(s) 580, 719, 756, 974, 1036, 1073, 1479, 1507, 2001
AhdI GACNNNNNGTC 1 cut(s) 1704
AjnI CCWGG 5 cut(s) 309, 344, 484, 1362, 1629
AleI CACNNNNGTG 1 cut(s) 1428
AloI GAACNNNNNNTCC 2 cut(s) 104, 136
Alw21I GWGCWC 2 cut(s) 296, 948
Alw26I GTCTC 1 cut(s) 9
AlwI GGATC 5 cut(s) 35, 48, 301, 1000, 2085
AlwNI CAGNNNCTG 1 cut(s) 1487
AoxI GGCC 7 cut(s) 184, 532, 902, 967, 1410, 1617, 1923
ApeKI GCWGC 9 cut(s) 154, 417, 449, 1141, 1208, 1211, 1232, 1448, 1760
ApoI RAATTY 3 cut(s) 683, 1191, 2078
AsiGI ACCGGT 1 cut(s) 236
AspLEI GCGC 2 cut(s) 63, 1164
AspS9I GGNCC 3 cut(s) 300, 1359, 1410
AsuHPI GGTGA 4 cut(s) 334, 482, 938, 1025
AsuII TTCGAA 1 cut(s) 556
AsuNHI GCTAGC 1 cut(s) 652
AvaII GGWCC 2 cut(s) 300, 1359
BamHI GGATCC 2 cut(s) 40, 2090
BanII GRGCYC 2 cut(s) 948, 1350
BbsI GAAGAC 1 cut(s) 979
Bbv12I GWGCWC 2 cut(s) 296, 948
BbvI GCAGC 9 cut(s) 166, 429, 461, 1153, 1195, 1198, 1219, 1460, 1772
BccI CCATC 4 cut(s) 256, 959, 1397, 1970
BceAI ACGGC 1 cut(s) 124
BciT130I CCWGG 5 cut(s) 311, 346, 486, 1364, 1631
BclI TGATCA 2 cut(s) 567, 1893
BcoDI GTCTC 1 cut(s) 9
BfaI CTAG 5 cut(s) 459, 653, 1043, 1445, 2067
BfmI CTRYAG 3 cut(s) 639, 1212, 1947
BfoI RGCGCY 1 cut(s) 1165
BfuAI ACCTGC 2 cut(s) 380, 1954
BlpI GCTNAGC 1 cut(s) 947
Bme1390I CCNGG 5 cut(s) 311, 346, 486, 1364, 1631
Bme18I GGWCC 2 cut(s) 300, 1359
BmeRI GACNNNNNGTC 1 cut(s) 1704
BmgT120I GGNCC 3 cut(s) 300, 1359, 1410
BmiI GGNNCC 4 cut(s) 42, 1361, 1417, 2092
BmrFI CCNGG 5 cut(s) 311, 346, 486, 1364, 1631
BmrI ACTGGG 1 cut(s) 588
BmsI GCATC 4 cut(s) 384, 402, 1376, 1924
BmtI GCTAGC 1 cut(s) 656
BmuI ACTGGG 1 cut(s) 588
BpiI GAAGAC 1 cut(s) 979
Bpu1102I GCTNAGC 1 cut(s) 947
Bpu14I TTCGAA 1 cut(s) 556
BsaBI GATNNNNATC 2 cut(s) 566, 1469
BsaHI GRCGYC 1 cut(s) 465
BsaWI WCCGGW 2 cut(s) 22, 236
Bse118I RCCGGY 4 cut(s) 236, 467, 1412, 1511
Bse1I ACTGG 2 cut(s) 594, 1106
Bse3DI GCAATG 5 cut(s) 990, 996, 1305, 1578, 1839
Bse8I GATNNNNATC 2 cut(s) 566, 1469
BseBI CCWGG 5 cut(s) 311, 346, 486, 1364, 1631
BseGI GGATG 5 cut(s) 363, 840, 970, 1367, 1981
BseJI GATNNNNATC 2 cut(s) 566, 1469
BseMI GCAATG 5 cut(s) 990, 996, 1305, 1578, 1839
BseMII CTCAG 4 cut(s) 182, 555, 825, 961
BseNI ACTGG 2 cut(s) 594, 1106
BseRI GAGGAG 4 cut(s) 89, 92, 95, 98
BseXI GCAGC 9 cut(s) 166, 429, 461, 1153, 1195, 1198, 1219, 1460, 1772
BseYI CCCAGC 1 cut(s) 333
BsgI GTGCAG 1 cut(s) 1779
Bsh1236I CGCG 1 cut(s) 63
Bsh1285I CGRYCG 1 cut(s) 237
BshFI GGCC 7 cut(s) 186, 534, 904, 969, 1412, 1619, 1925
BshTI ACCGGT 1 cut(s) 236
BsiEI CGRYCG 1 cut(s) 237
BsiHKAI GWGCWC 2 cut(s) 296, 948
BsiSI CCGG 6 cut(s) 23, 237, 390, 468, 1413, 1512
BslFI GGGAC 2 cut(s) 1345, 1579
BsmAI GTCTC 1 cut(s) 9
BsmFI GGGAC 2 cut(s) 1345, 1579
BsmI GAATGC 2 cut(s) 170, 1098
BsnI GGCC 7 cut(s) 186, 534, 904, 969, 1412, 1619, 1925
Bsp119I TTCGAA 1 cut(s) 556
Bsp1286I GDGCHC 3 cut(s) 296, 948, 1350
Bsp1720I GCTNAGC 1 cut(s) 947
BspACI CCGC 5 cut(s) 63, 183, 266, 405, 747
BspANI GGCC 7 cut(s) 186, 534, 904, 969, 1412, 1619, 1925
BspCNI CTCAG 4 cut(s) 183, 554, 824, 960
BspFNI CGCG 1 cut(s) 63
BspHI TCATGA 1 cut(s) 1461
BspLI GGNNCC 4 cut(s) 42, 1361, 1417, 2092
BspMAI CTGCAG 3 cut(s) 643, 1216, 1951
BspMI ACCTGC 2 cut(s) 380, 1954
BspOI GCTAGC 1 cut(s) 656
BspPI GGATC 5 cut(s) 35, 48, 301, 1000, 2085
BspQI GCTCTTC 2 cut(s) 618, 1613
BspT104I TTCGAA 1 cut(s) 556
BsrDI GCAATG 5 cut(s) 990, 996, 1305, 1578, 1839
BsrFI RCCGGY 4 cut(s) 236, 467, 1412, 1511
BsrI ACTGG 2 cut(s) 594, 1106
BssAI RCCGGY 4 cut(s) 236, 467, 1412, 1511
BssNI GRCGYC 1 cut(s) 465
BssT1I CCWWGG 5 cut(s) 1009, 1317, 1524, 1662, 1926
Bst2UI CCWGG 5 cut(s) 311, 346, 486, 1364, 1631
Bst4CI ACNGT 6 cut(s) 361, 626, 1252, 1427, 1646, 1679
Bst6I CTCTTC 6 cut(s) 47, 66, 542, 558, 618, 1613
BstACI GRCGYC 1 cut(s) 465
BstAPI GCANNNNNTGC 3 cut(s) 136, 1205, 1655
BstBI TTCGAA 1 cut(s) 556
BstC8I GCNNGC 6 cut(s) 188, 322, 654, 1216, 1810, 1995
BstDEI CTNAG 4 cut(s) 191, 541, 811, 947
BstDSI CCRYGG 1 cut(s) 1423
BstENI CCTNNNNNAGG 2 cut(s) 343, 1781
BstF5I GGATG 5 cut(s) 363, 840, 970, 1367, 1981
BstFNI CGCG 1 cut(s) 63
BstH2I RGCGCY 1 cut(s) 1165
BstHHI GCGC 2 cut(s) 63, 1164
BstMAI GTCTC 1 cut(s) 9
BstMCI CGRYCG 1 cut(s) 237
BstNI CCWGG 5 cut(s) 311, 346, 486, 1364, 1631
BstNSI RCATGY 1 cut(s) 796
BstSCI CCNGG 5 cut(s) 309, 344, 484, 1362, 1629
BstSFI CTRYAG 3 cut(s) 639, 1212, 1947
BstUI CGCG 1 cut(s) 63
BstV1I GCAGC 9 cut(s) 166, 429, 461, 1153, 1195, 1198, 1219, 1460, 1772
BstV2I GAAGAC 1 cut(s) 979
BstX2I RGATCY 3 cut(s) 40, 306, 2090
BstXI CCANNNNNNTGG 2 cut(s) 310, 1562
BstYI RGATCY 3 cut(s) 40, 306, 2090
BsuRI GGCC 7 cut(s) 186, 534, 904, 969, 1412, 1619, 1925
BtgI CCRYGG 1 cut(s) 1423
BtgZI GCGATG 1 cut(s) 379
BtsCI GGATG 5 cut(s) 363, 840, 970, 1367, 1981
BtsI GCAGTG 1 cut(s) 1956
BtsIMutI CAGTG 6 cut(s) 601, 1113, 1248, 1350, 1651, 1956
BveI ACCTGC 2 cut(s) 380, 1954
Cac8I GCNNGC 6 cut(s) 188, 322, 654, 1216, 1810, 1995
CaiI CAGNNNCTG 1 cut(s) 1487
CciI TCATGA 1 cut(s) 1461
CfoI GCGC 2 cut(s) 63, 1164
Cfr10I RCCGGY 4 cut(s) 236, 467, 1412, 1511
Cfr13I GGNCC 3 cut(s) 300, 1359, 1410
CseI GACGC 1 cut(s) 473
Csp6I GTAC 5 cut(s) 13, 600, 1253, 1675, 1943
CspAI ACCGGT 1 cut(s) 236
CviAII CATG 9 cut(s) 144, 793, 961, 1003, 1200, 1407, 1462, 1684, 2038
CviQI GTAC 5 cut(s) 13, 600, 1253, 1675, 1943
DdeI CTNAG 4 cut(s) 191, 541, 811, 947
DriI GACNNNNNGTC 1 cut(s) 1704
Eam1104I CTCTTC 6 cut(s) 47, 66, 542, 558, 618, 1613
Eam1105I GACNNNNNGTC 1 cut(s) 1704
EarI CTCTTC 6 cut(s) 47, 66, 542, 558, 618, 1613
Ecl136II GAGCTC 1 cut(s) 946
Eco130I CCWWGG 5 cut(s) 1009, 1317, 1524, 1662, 1926
Eco147I AGGCCT 1 cut(s) 1619
Eco24I GRGCYC 2 cut(s) 948, 1350
Eco47I GGWCC 2 cut(s) 300, 1359
Eco53kI GAGCTC 1 cut(s) 946
Eco57I CTGAAG 1 cut(s) 385
EcoICRI GAGCTC 1 cut(s) 946
EcoNI CCTNNNNNAGG 2 cut(s) 343, 1781
EcoRII CCWGG 5 cut(s) 309, 344, 484, 1362, 1629
EcoT14I CCWWGG 5 cut(s) 1009, 1317, 1524, 1662, 1926
EcoT22I ATGCAT 1 cut(s) 1336
EcoT38I GRGCYC 2 cut(s) 948, 1350
ErhI CCWWGG 5 cut(s) 1009, 1317, 1524, 1662, 1926
FaeI CATG 9 cut(s) 147, 796, 964, 1006, 1203, 1410, 1465, 1687, 2041
FalI AAGNNNNNCTT 2 cut(s) 1796, 1828
FaqI GGGAC 2 cut(s) 1345, 1579
FatI CATG 9 cut(s) 143, 792, 960, 1002, 1199, 1406, 1461, 1683, 2037
FauI CCCGC 1 cut(s) 259
FauNDI CATATG 3 cut(s) 820, 911, 1336
FbaI TGATCA 2 cut(s) 567, 1893
FblI GTMKAC 1 cut(s) 33
FokI GGATG 5 cut(s) 350, 847, 977, 1354, 1988
FriOI GRGCYC 2 cut(s) 948, 1350
FspBI CTAG 5 cut(s) 459, 653, 1043, 1445, 2067
GlaI GCGC 2 cut(s) 62, 1163
GsaI CCCAGC 1 cut(s) 337
HaeII RGCGCY 1 cut(s) 1165
HaeIII GGCC 7 cut(s) 186, 534, 904, 969, 1412, 1619, 1925
HapII CCGG 6 cut(s) 23, 237, 390, 468, 1413, 1512
HgaI GACGC 1 cut(s) 473
HhaI GCGC 2 cut(s) 63, 1164
Hin1I GRCGYC 1 cut(s) 465
Hin1II CATG 9 cut(s) 147, 796, 964, 1006, 1203, 1410, 1465, 1687, 2041
Hin6I GCGC 2 cut(s) 61, 1162
HinP1I GCGC 2 cut(s) 61, 1162
HindIII AAGCTT 2 cut(s) 975, 1132
HinfI GANTC 4 cut(s) 444, 645, 1458, 1712
HpaII CCGG 6 cut(s) 23, 237, 390, 468, 1413, 1512
HphI GGTGA 4 cut(s) 334, 482, 938, 1025
Hpy166II GTNNAC 3 cut(s) 34, 856, 1675
Hpy188I TCNGA 6 cut(s) 45, 167, 255, 789, 1079, 1489
Hpy188III TCNNGA 9 cut(s) 8, 214, 289, 328, 367, 1462, 1507, 1640, 1709
Hpy8I GTNNAC 3 cut(s) 34, 856, 1675
HpyAV CCTTC 9 cut(s) 86, 349, 409, 664, 774, 980, 1630, 1697, 1798
HpyCH4III ACNGT 6 cut(s) 361, 626, 1252, 1427, 1646, 1679
HpyCH4IV ACGT 2 cut(s) 161, 258
HpyF3I CTNAG 4 cut(s) 191, 541, 811, 947
HpySE526I ACGT 2 cut(s) 161, 258
Hsp92I GRCGYC 1 cut(s) 465
Hsp92II CATG 9 cut(s) 147, 796, 964, 1006, 1203, 1410, 1465, 1687, 2041
HspAI GCGC 2 cut(s) 61, 1162
Ksp22I TGATCA 2 cut(s) 567, 1893
LguI GCTCTTC 2 cut(s) 618, 1613
LmnI GCTCC 3 cut(s) 1138, 1663, 1887
Lsp1109I GCAGC 9 cut(s) 166, 429, 461, 1153, 1195, 1198, 1219, 1460, 1772
LweI GCATC 4 cut(s) 384, 402, 1376, 1924
MaeI CTAG 5 cut(s) 459, 653, 1043, 1445, 2067
MaeII ACGT 2 cut(s) 161, 258
MaeIII GTNAC 3 cut(s) 461, 1013, 1679
MfeI CAATTG 1 cut(s) 1869
MflI RGATCY 3 cut(s) 40, 306, 2090
MhlI GDGCHC 3 cut(s) 296, 948, 1350
MluCI AATT 9 cut(s) 581, 683, 1191, 1227, 1557, 1726, 1869, 2031, 2078
MlyI GAGTC 3 cut(s) 654, 1467, 1706
MmeI TCCRAC 3 cut(s) 805, 1102, 1204
Mph1103I ATGCAT 1 cut(s) 1336
MseI TTAA 3 cut(s) 777, 1275, 2084
MslI CAYNNNNRTG 4 cut(s) 863, 1001, 1339, 1428
MspA1I CMGCKG 2 cut(s) 157, 405
MspI CCGG 6 cut(s) 23, 237, 390, 468, 1413, 1512
MspR9I CCNGG 5 cut(s) 311, 346, 486, 1364, 1631
MunI CAATTG 1 cut(s) 1869
Mva1269I GAATGC 2 cut(s) 170, 1098
MvaI CCWGG 5 cut(s) 311, 346, 486, 1364, 1631
MvnI CGCG 1 cut(s) 63
NdeI CATATG 3 cut(s) 820, 911, 1336
NheI GCTAGC 1 cut(s) 652
NlaIII CATG 9 cut(s) 147, 796, 964, 1006, 1203, 1410, 1465, 1687, 2041
NlaIV GGNNCC 4 cut(s) 42, 1361, 1417, 2092
NmeAIII GCCGAG 1 cut(s) 510
NmuCI GTSAC 2 cut(s) 461, 1013
NsiI ATGCAT 1 cut(s) 1336
NspI RCATGY 1 cut(s) 796
NspV TTCGAA 1 cut(s) 556
OliI CACNNNNGTG 1 cut(s) 1428
PagI TCATGA 1 cut(s) 1461
PceI AGGCCT 1 cut(s) 1619
PciI ACATGT 1 cut(s) 792
PciSI GCTCTTC 2 cut(s) 618, 1613
PctI GAATGC 2 cut(s) 170, 1098
PfeI GAWTC 1 cut(s) 444
PinAI ACCGGT 1 cut(s) 236
PleI GAGTC 3 cut(s) 653, 1466, 1706
PpsI GAGTC 3 cut(s) 653, 1466, 1706
PscI ACATGT 1 cut(s) 792
PsiI TTATAA 1 cut(s) 1772
Psp124BI GAGCTC 1 cut(s) 948
Psp6I CCWGG 5 cut(s) 309, 344, 484, 1362, 1629
PspFI CCCAGC 1 cut(s) 333
PspGI CCWGG 5 cut(s) 309, 344, 484, 1362, 1629
PspN4I GGNNCC 4 cut(s) 42, 1361, 1417, 2092
PspPI GGNCC 3 cut(s) 300, 1359, 1410
PstI CTGCAG 3 cut(s) 643, 1216, 1951
PstNI CAGNNNCTG 1 cut(s) 1487
PsuI RGATCY 3 cut(s) 40, 306, 2090
PvuII CAGCTG 1 cut(s) 157
RsaI GTAC 5 cut(s) 14, 601, 1254, 1676, 1944
RsaNI GTAC 5 cut(s) 13, 600, 1253, 1675, 1943
RseI CAYNNNNRTG 4 cut(s) 863, 1001, 1339, 1428
SacI GAGCTC 1 cut(s) 948
SapI GCTCTTC 2 cut(s) 618, 1613
SaqAI TTAA 3 cut(s) 777, 1275, 2084
Sau96I GGNCC 3 cut(s) 300, 1359, 1410
SbfI CCTGCAGG 1 cut(s) 643
SchI GAGTC 3 cut(s) 654, 1467, 1706
ScrFI CCNGG 5 cut(s) 311, 346, 486, 1364, 1631
SdaI CCTGCAGG 1 cut(s) 643
SduI GDGCHC 3 cut(s) 296, 948, 1350
SfaNI GCATC 4 cut(s) 384, 402, 1376, 1924
SfcI CTRYAG 3 cut(s) 639, 1212, 1947
SfuI TTCGAA 1 cut(s) 556
SgrAI CRCCGGYG 1 cut(s) 467
SinI GGWCC 2 cut(s) 300, 1359
SmiMI CAYNNNNRTG 4 cut(s) 863, 1001, 1339, 1428
SmlI CTYRAG 1 cut(s) 6
SmoI CTYRAG 1 cut(s) 6
Sse8387I CCTGCAGG 1 cut(s) 643
Sse9I AATT 9 cut(s) 581, 683, 1191, 1227, 1557, 1726, 1869, 2031, 2078
SseBI AGGCCT 1 cut(s) 1619
SsiI CCGC 5 cut(s) 63, 183, 266, 405, 747
SspMI CTAG 5 cut(s) 459, 653, 1043, 1445, 2067
SstI GAGCTC 1 cut(s) 948
StuI AGGCCT 1 cut(s) 1619
StyD4I CCNGG 5 cut(s) 309, 344, 484, 1362, 1629
StyI CCWWGG 5 cut(s) 1009, 1317, 1524, 1662, 1926
TaaI ACNGT 6 cut(s) 361, 626, 1252, 1427, 1646, 1679
TaiI ACGT 2 cut(s) 164, 261
TaqI TCGA 4 cut(s) 442, 556, 804, 1048
TaqII GACCGA 1 cut(s) 761
TasI AATT 9 cut(s) 581, 683, 1191, 1227, 1557, 1726, 1869, 2031, 2078
TauI GCSGC 2 cut(s) 66, 186
TfiI GAWTC 1 cut(s) 444
Tru1I TTAA 3 cut(s) 777, 1275, 2084
Tru9I TTAA 3 cut(s) 777, 1275, 2084
TscAI CASTG 6 cut(s) 601, 1113, 1255, 1357, 1651, 1956
TseFI GTSAC 2 cut(s) 461, 1013
TseI GCWGC 9 cut(s) 154, 417, 449, 1141, 1208, 1211, 1232, 1448, 1760
Tsp45I GTSAC 2 cut(s) 461, 1013
TspDTI ATGAA 6 cut(s) 163, 233, 979, 1481, 1804, 2054
TspGWI ACGGA 1 cut(s) 1032
TspRI CASTG 6 cut(s) 601, 1113, 1255, 1357, 1651, 1956
VpaK11BI GGWCC 2 cut(s) 300, 1359
XagI CCTNNNNNAGG 2 cut(s) 343, 1781
XapI RAATTY 3 cut(s) 683, 1191, 2078
XceI RCATGY 1 cut(s) 796
XcmI CCANNNNNNNNNTGG 2 cut(s) 492, 1599
XmiI GTMKAC 1 cut(s) 33
XspI CTAG 5 cut(s) 459, 653, 1043, 1445, 2067
Zsp2I ATGCAT 1 cut(s) 1336
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.