AT3G18750

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
Physical Location & Seq
Reverse (-)
6454013 .. 6457613
3601 bp
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UTR
Exon/CDS
Intron
AT3G18750.6

Sequence Viewer

Length: 1704 bp
ATGGAAGGTACAGATGATGCTTCTGCACTTCAAGAGCCTCCTGACCCCGAAGTGCTCGAAGTTGATCCAACTTTTCGATATATACGGTATAAAGAGGTCATTGGAAAAGGGGCATTCAAGACTGTTTATAAGGCATTTGATGAAGTAGATGGAATTGAAGTCGCATGGAACCAAGTACGGATAGATGATGTTTTGCAGTCACCGAATTGCCTGGAGAGGCTCTATTCTGAAGTGCGTCTGTTGAAATCATTGAAGCACAATAATATTATTAGGTTCTATAATTCATGGATCGATGATAAGAACAAGACTGTTAACATAATAACTGAGCTATTCACTTCAGGGAGCCTCCGGCACTACCGCAAGAAACACAGGAAGGTGAACATGAAGGCCGTCAAGAATTGGGCGAGGCAGATTTTAATGGGTTTGAGATATCTTCACGGTCAAGAGCCACCAATTATACATCGGGATCTCAAATGCGACAACATTTTTATCAATGGAAACCATGGAGAAGTGAAAATAGGAGATCTTGGTCTAGCCACTGTCATGGAGCAAGCTAATGCCAAAAGTGTGATTGGAACCCCGGAGTTTATGGCACCCGAGCTTTACGACGAGAACTACAACGAATTGGCTGATATTTATTCATTTGGGATGTGTATGTTGGAGATGGTGACATTTGATTATCCCTACTGTGAATGCAAAAACTCTGCTCAGATATACAAGAAGGTTTCATCGGGAATAAAACCTGCTTCACTCTCCAGGGTTAAAGACCCAGAAGTAAAACAGTTTATTGAGAAATGCTTACTTCCTGCATCCGAAAGGCTGTCAGCAAAAGAGCTTTTATTGGACCCTTTTCTGCAACTAAATGGTTTAACAATGAACAATCCTTTGCCGCTTCCTGACATTGTAATGCCCAAAGAAGGCGCATTTGGAGACCGTTGCCTTATGTCTGAAGGTCCTCCTACAACACGGCCTAGTAAAACCTTGTCGATAGATCTTGATGAAGACAGTAACCTGCCTATTGTTACTTTTAGCGACAATTCAGGATCCAGGTGTATTGAGGTTAGACGCGCAAAGAGAGGGAATTTCTTTGTCCTCAAGGGTGAAGAAAACGATGAGCAGTCTGTGTCCTTAATTCTTCGTATAGTAGATGAGAATGGGCGTGTGAGGAACATTCATTTCCTGTTCTATCAAGAAGGGGACACTGCTTCTAAGGTGTCGAGTGAGATGGTTGAGCAACTCGAGTTAACTGACCAGAACGTCACGTTTATAGCCGAGCTGATTGATATACTACTTGTCAACATGATACCCACCTGGAAAACCGATGTCACAGTCGATCATCTCATCCATTCGCAACTGAATCAGAACTCAAGAAGTCATCATAACGAAGCAAAGCCACAGAAACAAGAGGAGACTGTTTTTCATGATACTTGTGAGTTGGTTAGTCACTCGTGTAACTCAGATTGCCCACGATCAGATGAGGAAGATAAGCAATGCGTCGATGCCACCAAAGGAGAAGACAAGAGCTCCATTCAAGAAGTAGAAGAAGCAACCGAACCAGTAAGTTTGGAGGAAGAAGAAAGGTTAAGACAAGAGCTGGAGGAGATAGAAGCTAAGTATCAGGAAGATATGAAAGAGATAGCAACGAAAAGAGAAGAGGCCATTATGGAGACGAAGAAAAAGTTGTCTCTGATGAAGTTAAAGTAA

Protein Analysis

567

Amino Acids

64.86

Weight (kDa)

5.05

Isoelectric Point (pI)

49.88

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 29 - 187 3.4e-24 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 30 - 189 1.1e-34 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 129
AasI GACNNNNNNGTC 1 cut(s) 1256
Acc36I ACCTGC 2 cut(s) 751, 1020
AccB1I GGYRCC 1 cut(s) 592
AccII CGCG 1 cut(s) 1068
AciI CCGC 2 cut(s) 358, 890
AclWI GGATC 5 cut(s) 59, 296, 474, 1038, 1051
AcsI RAATTY 1 cut(s) 1081
AcuI CTGAAG 3 cut(s) 249, 321, 969
AfaI GTAC 2 cut(s) 10, 177
AfiI CCNNNNNNNGG 1 cut(s) 917
AgsI TTSAA 6 cut(s) 32, 118, 158, 244, 253, 1532
AjnI CCWGG 4 cut(s) 210, 755, 1046, 1310
AjuI GAANNNNNNNTTGG 2 cut(s) 909, 941
AluBI AGCT 8 cut(s) 328, 554, 601, 835, 1276, 1524, 1594, 1610
AluI AGCT 8 cut(s) 328, 554, 601, 835, 1276, 1524, 1594, 1610
Alw21I GWGCWC 2 cut(s) 57, 1526
Alw26I GTCTC 4 cut(s) 924, 1403, 1661, 1689
AlwI GGATC 5 cut(s) 59, 296, 474, 1038, 1051
Ama87I CYCGRG 2 cut(s) 596, 1238
AoxI GGCC 3 cut(s) 387, 968, 1656
ApoI RAATTY 1 cut(s) 1081
AspLEI GCGC 2 cut(s) 923, 1070
AspS9I GGNCC 2 cut(s) 844, 953
AsuC2I CCSGG 1 cut(s) 581
AsuHPI GGTGA 4 cut(s) 192, 388, 679, 1112
AvaI CYCGRG 2 cut(s) 596, 1238
AvaII GGWCC 2 cut(s) 844, 953
BamHI GGATCC 1 cut(s) 1043
BanI GGYRCC 1 cut(s) 592
BanII GRGCYC 1 cut(s) 1526
BauI CACGAG 1 cut(s) 1447
BbsI GAAGAC 2 cut(s) 1008, 1521
Bbv12I GWGCWC 2 cut(s) 57, 1526
BccI CCATC 3 cut(s) 143, 658, 1219
BceAI ACGGC 2 cut(s) 374, 983
BciT130I CCWGG 4 cut(s) 212, 757, 1048, 1312
BcnI CCSGG 1 cut(s) 581
BcoDI GTCTC 4 cut(s) 924, 1403, 1661, 1689
BfaI CTAG 2 cut(s) 533, 972
BfuAI ACCTGC 2 cut(s) 751, 1020
BglII AGATCT 2 cut(s) 523, 991
BisI GCNGC 1 cut(s) 890
BlsI GCNGC 1 cut(s) 891
Bme1390I CCNGG 5 cut(s) 212, 581, 757, 1048, 1312
Bme18I GGWCC 2 cut(s) 844, 953
BmeT110I CYCGRG 2 cut(s) 596, 1238
BmgT120I GGNCC 2 cut(s) 844, 953
BmiI GGNNCC 6 cut(s) 170, 344, 577, 594, 846, 1045
BmrFI CCNGG 5 cut(s) 212, 581, 757, 1048, 1312
BmsI GCATC 3 cut(s) 7, 818, 1489
BpiI GAAGAC 2 cut(s) 1008, 1521
BpmI CTGGAG 3 cut(s) 233, 739, 1616
BpuEI CTTGAG 2 cut(s) 1079, 1351
BpuMI CCSGG 1 cut(s) 581
Bsa29I ATCGAT 1 cut(s) 291
BsaI GGTCTC 1 cut(s) 924
BsaJI CCNNGG 3 cut(s) 502, 579, 756
BsaXI ACNNNNNCTCC 2 cut(s) 1508, 1538
Bsc4I CCNNNNNNNGG 1 cut(s) 917
Bse1I ACTGG 1 cut(s) 1556
Bse3DI GCAATG 1 cut(s) 1496
BseBI CCWGG 4 cut(s) 212, 757, 1048, 1312
BseCI ATCGAT 1 cut(s) 291
BseDI CCNNGG 3 cut(s) 502, 579, 756
BseGI GGATG 3 cut(s) 654, 809, 1341
BseLI CCNNNNNNNGG 1 cut(s) 917
BseMI GCAATG 1 cut(s) 1496
BseMII CTCAG 3 cut(s) 315, 722, 1470
BseNI ACTGG 1 cut(s) 1556
BseRI GAGGAG 2 cut(s) 1421, 1613
BsgI GTGCAG 1 cut(s) 9
Bsh1236I CGCG 1 cut(s) 1068
BshFI GGCC 3 cut(s) 389, 970, 1658
BshNI GGYRCC 1 cut(s) 592
BshVI ATCGAT 1 cut(s) 291
BsiHKAI GWGCWC 2 cut(s) 57, 1526
BsiHKCI CYCGRG 2 cut(s) 596, 1238
BsiSI CCGG 2 cut(s) 349, 581
BslFI GGGAC 1 cut(s) 1211
BslI CCNNNNNNNGG 1 cut(s) 917
BsmAI GTCTC 4 cut(s) 924, 1403, 1661, 1689
BsmBI CGTCTC 1 cut(s) 1661
BsmFI GGGAC 1 cut(s) 1211
BsmI GAATGC 2 cut(s) 113, 698
BsnI GGCC 3 cut(s) 389, 970, 1658
Bso31I GGTCTC 1 cut(s) 924
BsoBI CYCGRG 2 cut(s) 596, 1238
Bsp1286I GDGCHC 2 cut(s) 57, 1526
Bsp143I GATC 8 cut(s) 64, 288, 466, 523, 991, 1043, 1333, 1469
Bsp19I CCATGG 1 cut(s) 502
BspACI CCGC 2 cut(s) 358, 890
BspANI GGCC 3 cut(s) 389, 970, 1658
BspCNI CTCAG 3 cut(s) 316, 721, 1469
BspDI ATCGAT 1 cut(s) 291
BspFNI CGCG 1 cut(s) 1068
BspHI TCATGA 1 cut(s) 1420
BspLI GGNNCC 6 cut(s) 170, 344, 577, 594, 846, 1045
BspMI ACCTGC 2 cut(s) 751, 1020
BspPI GGATC 5 cut(s) 59, 296, 474, 1038, 1051
BspT107I GGYRCC 1 cut(s) 592
BspTNI GGTCTC 1 cut(s) 924
BsrDI GCAATG 1 cut(s) 1496
BsrI ACTGG 1 cut(s) 1556
BssECI CCNNGG 3 cut(s) 502, 579, 756
BssMI GATC 8 cut(s) 64, 288, 466, 523, 991, 1043, 1333, 1469
BssSI CACGAG 1 cut(s) 1447
BssT1I CCWWGG 1 cut(s) 502
Bst2BI CACGAG 1 cut(s) 1447
Bst2UI CCWGG 4 cut(s) 212, 757, 1048, 1312
Bst6I CTCTTC 1 cut(s) 1647
BstC8I GCNNGC 1 cut(s) 552
BstDEI CTNAG 5 cut(s) 324, 708, 1209, 1456, 1611
BstDSI CCRYGG 1 cut(s) 502
BstF5I GGATG 3 cut(s) 654, 809, 1341
BstFNI CGCG 1 cut(s) 1068
BstHHI GCGC 2 cut(s) 923, 1070
BstKTI GATC 8 cut(s) 67, 291, 469, 526, 994, 1046, 1336, 1472
BstMAI GTCTC 4 cut(s) 924, 1403, 1661, 1689
BstMBI GATC 8 cut(s) 64, 288, 466, 523, 991, 1043, 1333, 1469
BstNI CCWGG 4 cut(s) 212, 757, 1048, 1312
BstSCI CCNGG 5 cut(s) 210, 579, 755, 1046, 1310
BstUI CGCG 1 cut(s) 1068
BstV2I GAAGAC 2 cut(s) 1008, 1521
BstX2I RGATCY 4 cut(s) 466, 523, 991, 1043
BstXI CCANNNNNNTGG 1 cut(s) 544
BstYI RGATCY 4 cut(s) 466, 523, 991, 1043
Bsu15I ATCGAT 1 cut(s) 291
BsuRI GGCC 3 cut(s) 389, 970, 1658
BsuTUI ATCGAT 1 cut(s) 291
BtgI CCRYGG 1 cut(s) 502
BtsCI GGATG 3 cut(s) 654, 809, 1341
BtsI GCAGTG 1 cut(s) 1200
BtsIMutI CAGTG 2 cut(s) 537, 1200
BveI ACCTGC 2 cut(s) 751, 1020
Cac8I GCNNGC 1 cut(s) 552
CciI TCATGA 1 cut(s) 1420
CfoI GCGC 2 cut(s) 923, 1070
Cfr13I GGNCC 2 cut(s) 844, 953
ClaI ATCGAT 1 cut(s) 291
CseI GACGC 3 cut(s) 224, 1074, 1483
Csp6I GTAC 2 cut(s) 9, 176
CviAII CATG 7 cut(s) 165, 285, 382, 503, 544, 1300, 1421
CviQI GTAC 2 cut(s) 9, 176
DdeI CTNAG 5 cut(s) 324, 708, 1209, 1456, 1611
DpnI GATC 8 cut(s) 66, 290, 468, 525, 993, 1045, 1335, 1471
DpnII GATC 8 cut(s) 64, 288, 466, 523, 991, 1043, 1333, 1469
DrdI GACNNNNNNGTC 1 cut(s) 1256
DseDI GACNNNNNNGTC 1 cut(s) 1256
Eam1104I CTCTTC 1 cut(s) 1647
EarI CTCTTC 1 cut(s) 1647
Ecl136II GAGCTC 1 cut(s) 1524
Eco130I CCWWGG 1 cut(s) 502
Eco24I GRGCYC 1 cut(s) 1526
Eco31I GGTCTC 1 cut(s) 924
Eco32I GATATC 1 cut(s) 431
Eco47I GGWCC 2 cut(s) 844, 953
Eco53kI GAGCTC 1 cut(s) 1524
Eco57I CTGAAG 3 cut(s) 249, 321, 969
Eco88I CYCGRG 2 cut(s) 596, 1238
EcoICRI GAGCTC 1 cut(s) 1524
EcoO109I RGGNCCY 1 cut(s) 953
EcoRII CCWGG 4 cut(s) 210, 755, 1046, 1310
EcoRV GATATC 1 cut(s) 431
EcoT14I CCWWGG 1 cut(s) 502
EcoT38I GRGCYC 1 cut(s) 1526
ErhI CCWWGG 1 cut(s) 502
Esp3I CGTCTC 1 cut(s) 1661
FaeI CATG 7 cut(s) 168, 288, 385, 506, 547, 1303, 1424
FaqI GGGAC 1 cut(s) 1211
FatI CATG 7 cut(s) 164, 284, 381, 502, 543, 1299, 1420
Fnu4HI GCNGC 1 cut(s) 890
FokI GGATG 3 cut(s) 661, 796, 1328
FriOI GRGCYC 1 cut(s) 1526
Fsp4HI GCNGC 1 cut(s) 890
FspBI CTAG 2 cut(s) 533, 972
GlaI GCGC 2 cut(s) 922, 1069
GluI GCNGC 1 cut(s) 890
GsuI CTGGAG 3 cut(s) 233, 739, 1616
HaeIII GGCC 3 cut(s) 389, 970, 1658
HapII CCGG 2 cut(s) 349, 581
HgaI GACGC 3 cut(s) 224, 1074, 1483
HhaI GCGC 2 cut(s) 923, 1070
Hin1II CATG 7 cut(s) 168, 288, 385, 506, 547, 1303, 1424
Hin6I GCGC 2 cut(s) 921, 1068
HinP1I GCGC 2 cut(s) 921, 1068
HincII GTYRAC 3 cut(s) 313, 1245, 1297
HindII GTYRAC 3 cut(s) 313, 1245, 1297
HinfI GANTC 1 cut(s) 1357
HpaI GTTAAC 2 cut(s) 313, 1245
HpaII CCGG 2 cut(s) 349, 581
HphI GGTGA 4 cut(s) 192, 388, 679, 1112
Hpy166II GTNNAC 4 cut(s) 313, 379, 1245, 1297
Hpy188I TCNGA 8 cut(s) 229, 711, 814, 949, 1362, 1459, 1474, 1689
Hpy8I GTNNAC 4 cut(s) 313, 379, 1245, 1297
Hpy99I CGWCG 2 cut(s) 611, 1499
HpyAV CCTTC 6 cut(s) 367, 379, 715, 911, 944, 1187
HpyCH4IV ACGT 2 cut(s) 1257, 1262
HpyCH4V TGCA 5 cut(s) 26, 196, 696, 809, 856
HpyF3I CTNAG 5 cut(s) 324, 708, 1209, 1456, 1611
HpySE526I ACGT 2 cut(s) 1257, 1262
Hsp92II CATG 7 cut(s) 168, 288, 385, 506, 547, 1303, 1424
HspAI GCGC 2 cut(s) 921, 1068
KspAI GTTAAC 2 cut(s) 313, 1245
Kzo9I GATC 8 cut(s) 64, 288, 466, 523, 991, 1043, 1333, 1469
LmnI GCTCC 3 cut(s) 342, 547, 1529
LweI GCATC 3 cut(s) 7, 818, 1489
MaeI CTAG 2 cut(s) 533, 972
MaeII ACGT 2 cut(s) 1257, 1262
MaeIII GTNAC 8 cut(s) 198, 667, 1007, 1021, 1258, 1324, 1442, 1451
MalI GATC 8 cut(s) 66, 290, 468, 525, 993, 1045, 1335, 1471
MboI GATC 8 cut(s) 64, 288, 466, 523, 991, 1043, 1333, 1469
MflI RGATCY 4 cut(s) 466, 523, 991, 1043
MhlI GDGCHC 2 cut(s) 57, 1526
MluCI AATT 9 cut(s) 153, 205, 280, 397, 453, 623, 1036, 1081, 1131
MmeI TCCRAC 2 cut(s) 92, 639
MseI TTAA 8 cut(s) 312, 416, 762, 869, 1130, 1244, 1583, 1697
MslI CAYNNNNRTG 2 cut(s) 542, 905
MspI CCGG 2 cut(s) 349, 581
MspR9I CCNGG 5 cut(s) 212, 581, 757, 1048, 1312
Mva1269I GAATGC 2 cut(s) 113, 698
MvaI CCWGG 4 cut(s) 212, 757, 1048, 1312
MvnI CGCG 1 cut(s) 1068
NciI CCSGG 1 cut(s) 581
NcoI CCATGG 1 cut(s) 502
NdeII GATC 8 cut(s) 64, 288, 466, 523, 991, 1043, 1333, 1469
NlaIII CATG 7 cut(s) 168, 288, 385, 506, 547, 1303, 1424
NlaIV GGNNCC 6 cut(s) 170, 344, 577, 594, 846, 1045
NmeAIII GCCGAG 1 cut(s) 1297
NmuCI GTSAC 5 cut(s) 198, 667, 1258, 1324, 1442
PaeR7I CTCGAG 1 cut(s) 1238
PagI TCATGA 1 cut(s) 1420
PctI GAATGC 2 cut(s) 113, 698
PfeI GAWTC 1 cut(s) 1357
PkrI GCNGC 1 cut(s) 891
PpuMI RGGWCCY 1 cut(s) 953
PsiI TTATAA 1 cut(s) 129
Psp124BI GAGCTC 1 cut(s) 1526
Psp5II RGGWCCY 1 cut(s) 953
Psp6I CCWGG 4 cut(s) 210, 755, 1046, 1310
PspGI CCWGG 4 cut(s) 210, 755, 1046, 1310
PspN4I GGNNCC 6 cut(s) 170, 344, 577, 594, 846, 1045
PspPI GGNCC 2 cut(s) 844, 953
PspPPI RGGWCCY 1 cut(s) 953
PspXI VCTCGAGB 1 cut(s) 1238
PsuI RGATCY 4 cut(s) 466, 523, 991, 1043
RsaI GTAC 2 cut(s) 10, 177
RsaNI GTAC 2 cut(s) 9, 176
RseI CAYNNNNRTG 2 cut(s) 542, 905
SacI GAGCTC 1 cut(s) 1526
SaqAI TTAA 8 cut(s) 312, 416, 762, 869, 1130, 1244, 1583, 1697
SatI GCNGC 1 cut(s) 890
Sau3AI GATC 8 cut(s) 64, 288, 466, 523, 991, 1043, 1333, 1469
Sau96I GGNCC 2 cut(s) 844, 953
ScrFI CCNGG 5 cut(s) 212, 581, 757, 1048, 1312
SduI GDGCHC 2 cut(s) 57, 1526
SfaNI GCATC 3 cut(s) 7, 818, 1489
Sfr274I CTCGAG 1 cut(s) 1238
SinI GGWCC 2 cut(s) 844, 953
SlaI CTCGAG 1 cut(s) 1238
SmiMI CAYNNNNRTG 2 cut(s) 542, 905
SmlI CTYRAG 3 cut(s) 1094, 1238, 1366
SmoI CTYRAG 3 cut(s) 1094, 1238, 1366
Sse9I AATT 9 cut(s) 153, 205, 280, 397, 453, 623, 1036, 1081, 1131
SsiI CCGC 2 cut(s) 358, 890
SspI AATATT 1 cut(s) 265
SspMI CTAG 2 cut(s) 533, 972
SstI GAGCTC 1 cut(s) 1526
StyD4I CCNGG 5 cut(s) 210, 579, 755, 1046, 1310
StyI CCWWGG 1 cut(s) 502
TaiI ACGT 2 cut(s) 1260, 1265
TaqI TCGA 8 cut(s) 57, 76, 291, 986, 1217, 1239, 1332, 1497
TasI AATT 9 cut(s) 153, 205, 280, 397, 453, 623, 1036, 1081, 1131
TauI GCSGC 1 cut(s) 892
TfiI GAWTC 1 cut(s) 1357
Tru1I TTAA 8 cut(s) 312, 416, 762, 869, 1130, 1244, 1583, 1697
Tru9I TTAA 8 cut(s) 312, 416, 762, 869, 1130, 1244, 1583, 1697
TscAI CASTG 2 cut(s) 544, 1207
TseFI GTSAC 5 cut(s) 198, 667, 1258, 1324, 1442
Tsp45I GTSAC 5 cut(s) 198, 667, 1258, 1324, 1442
TspGWI ACGGA 1 cut(s) 193
TspRI CASTG 2 cut(s) 544, 1207
VpaK11BI GGWCC 2 cut(s) 844, 953
XapI RAATTY 1 cut(s) 1081
XhoI CTCGAG 1 cut(s) 1238
XspI CTAG 2 cut(s) 533, 972
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.