Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0013945

Physical Location & Seq

Genomic Coordinates Forward (+)

6752422 .. 6754785

Gene Structure 2364 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G19480.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1767 bp

ATGGCGACGTCTCTGAATCTATCATCGATCTTCTCCTCCTCCTCAAGGCTCGTCACCACTCCCTCCTCTGTTTTTCCCATCCGTCAGAGGCGACGGATCATCCTCGTTACGTCTTCTTCTTCCGGAGGTGGAGGAAAACCGACGATTCTCGTAACGGAGAAGCTAGGCCAAGCGGGGATCGATCTGCTTAAGAAGTACGCTAATGTGGATTGCTCTTATGATCTGAGTCTCGAGGAGCTTTGTACGAAGATCTCTCTTTGTGATGCGCTCATCGTCAGGAGTGGTACCAAGGTTGGGAGAGATGTGTTTGAATCGTCGCGTGGGAGGCTTAAGGTTGTTGGACGCGCTGGTGTTGGGATTGATAACGTCGATTTGGCGGCGGCGACTGAGTATGGGTGTTTGGTTGTTAATGCTCCGACTGCGAACACTGTGGCTGCTGCTGAACACGGAATTGCGCTTTTGACCGCCATGGCTAGAAACATTGCTCAAGCTGATGCTTCTATCAAAGCTGGCAAATGGACGAGAAACAAGTATGTAGGTGTTTCACTTGTGGGGAAGACTCTTGCTGTTCTTGGTTTTGGTAAAGTTGGATCAGAGGTTGCTAGACGAGCCAGGGGACTTGGTATGCATGTCATTACACATGATCCTTATGCACCAGCGGATCGTGCACGAGCTATTGGTGTGGAGCTTGTTAGTTTTGAAGTAGCTATTTCAACTGCTGACTTCATCTCTTTGCATCTGCCTCTTACTGCTGCTACTTCGAAGATGATGAATGATGTGACCTTTGCGATGATGAAGAAAGGAGTCCGTATTGTTAATGTTGCTCGTGGTGGAGTTATTGATGAGGAAGCTCTTTTGAGAGCGCTTGACTCGGGTATTGTTGCTCAGGCAGCTCTTGATGTTTTTACAGTAGAGCCACCTGTTAAAGATAATAAGTTGGTGTTACATGAGAGTGTCACTGCCACACCTCATCTTGGTGCTAGTACTATGGAGGCTCAGGAAGGAGTGTCTATCGAAGTCGCAGAAGCTGTTATTGGAGCTTTGAGAGGAGAACTTGCTGCTACCGCGGTCAATGCACCAATGGTTCCACTAGAGGTATTGAGGGAGCTGAAGCCGTATGTTGTACTTGCTGAGAAGCTTGGGAGGCTGGCTGTACAATTGGTAACTGGTGGAAGCGGTGTGAATGCTGTGAAAGTGACTTATGCTTCTTCCAGAGCTCCTGATGATCTCGACACTAGACTTCTCCGAGCCATGGTCATAAAGGGGATCATCGAACCCATTTCCAGCGTATTCATAAATCTGGTTAACTCCGATTATATTGCCAAACAACGTGGAGTCAAAATCTCAGAAGAACGTATGGTTCTAGACGGCTCACCTGAGAATCCAATTGAATACATAACTGTTCGGATAGCAAACGTGGAATCAAGATTTGCCAGCGCTTTATCAGAGTCCGGTGAGATCAAAGTAGAAGGCAGAGTGAAACAAGGGGTTCCAAGTCTTACCAAAGTCGGATTATTTGGAGTGGATGTGAGTTTAGAAGGGAGTGTGATTCTGTGCAGGCAAGTAGATCAGCCTGGGATGATCGGTAAAGTTGCTAGCATCTTAGGAGATGAAAACGTCAACGTGAGCTTCATGAGCGTCGGTCGAATCGCTCCAGGCAAGCAAGCTGTGATGGCAATTGGAGTAGATGAACAACCAAGCAAAGAAACTTTGAAGAAAATCGGAGACATTCCTGCCATTGAAGAGTTTGTTTTCCTCAAACTATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000166 GO:0003006 GO:0003674 GO:0005488 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005739 GO:0005829 GO:0007275 GO:0008144 GO:0008150 GO:0009507 GO:0009532 GO:0009536 GO:0009553 GO:0009555 GO:0009561 GO:0009570 GO:0009790 GO:0009791 GO:0009793 GO:0010154 GO:0016020 GO:0017076 GO:0022414 GO:0030554 GO:0032501 GO:0032502 GO:0032553 GO:0032555 GO:0032559 GO:0035639 GO:0036094 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0048229 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0061458 GO:0097159 GO:0097367 GO:1901265 GO:1901363

KEGG Pathways

Metabolic & Signaling

ko00260 ko00680 ko01100 ko01120 ko01130 ko01200 ko01230 map00260 map00680 map01100 map01120 map01130 map01200 map01230

Pfam Domains

Protein Families

2-Hacid_dh 2-Hacid_dh_C ACT

Protein Analysis

588

Amino Acids

62.12

Weight (kDa)

8.41

Isoelectric Point (pI)

35.75

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
2-Hacid_dh	PF00389	49 - 358	5.7e-34	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
2-Hacid_dh_C	PF02826	151 - 326	7e-59	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
PGDH_inter	PF19304	369 - 485	5.8e-16	D-3-phosphoglycerate dehydrogenase intervening domain
ACT	PF01842	516 - 578	3.2e-10	ACT domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0013945)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G19480 AT4G34200
fragaria_vesca	FvH4_2g05310
malus_domestica	MD05G1088400.v1.1
prunus_persica	Prupe.8G134300_v2.0.a1 Prupe.8G134300_v2.0.a1
pyrus_communis	pycom05g08770
rosa_chinensis	RchiOBHm_Chr6g0255451
rosa_laevigata	RLG00000014836
rosa_multiflora	Rmu_sc0002360.1_g000009
rosa_roxburghii	Rroxscaffold_7G00209970
rosa_rugosa	Rorug05G0558900
rosa_samantha	Rh6AG074800 Rh6BG069400 Rh6CG068400 Rh6DG065200
rosa_wichuraiana	Rw6G006650

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	11
Acc65I	GGTACC	1 cut(s)	284
AccB1I	GGYRCC	1 cut(s)	284
AccII	CGCG	3 cut(s)	319, 345, 1067
AccIII	TCCGGA	1 cut(s)	122
AciI	CCGC	8 cut(s)	173, 377, 380, 465, 659, 1065, 1067, 1176
AclWI	GGATC	6 cut(s)	104, 185, 598, 638, 669, 1274
AcuI	CTGAAG	1 cut(s)	1130
AcyI	GRCGYC	1 cut(s)	8
AfaI	GTAC	6 cut(s)	197, 244, 286, 985, 1125, 1155
AfeI	AGCGCT	2 cut(s)	864, 1438
AfiI	CCNNNNNNNGG	4 cut(s)	45, 294, 974, 1252
AflII	CTTAAG	2 cut(s)	188, 329
AgsI	TTSAA	6 cut(s)	311, 701, 714, 1391, 1714, 1742
AjnI	CCWGG	3 cut(s)	611, 1573, 1654
AjuI	GAANNNNNNNTTGG	2 cut(s)	1017, 1049
Alw21I	GWGCWC	2 cut(s)	670, 1219
Alw26I	GTCTC	3 cut(s)	15, 233, 1719
Alw44I	GTGCAC	1 cut(s)	666
AlwI	GGATC	6 cut(s)	104, 185, 598, 638, 669, 1274
AlwNI	CAGNNNCTG	1 cut(s)	1028
Ama87I	CYCGRG	2 cut(s)	230, 871
Aor13HI	TCCGGA	1 cut(s)	122
Aor51HI	AGCGCT	2 cut(s)	864, 1438
AoxI	GGCC	1 cut(s)	166
ApaLI	GTGCAC	1 cut(s)	666
ApeKI	GCWGC	5 cut(s)	434, 437, 752, 890, 1058
Asp718I	GGTACC	1 cut(s)	284
AspLEI	GCGC	5 cut(s)	268, 347, 457, 865, 1439
AsuHPI	GGTGA	3 cut(s)	46, 1365, 1466
AsuII	TTCGAA	1 cut(s)	761
AsuNHI	GCTAGC	1 cut(s)	1595
AvaI	CYCGRG	2 cut(s)	230, 871
BaeGI	GKGCMC	1 cut(s)	670
BaeI	ACNNNNGTAYC	2 cut(s)	276, 309
BanI	GGYRCC	1 cut(s)	284
BanII	GRGCYC	1 cut(s)	1219
BauI	CACGAG	2 cut(s)	669, 825
BbsI	GAAGAC	2 cut(s)	105, 563
Bbv12I	GWGCWC	2 cut(s)	670, 1219
BbvI	GCAGC	5 cut(s)	421, 424, 739, 902, 1045
BccI	CCATC	2 cut(s)	86, 1666
BceAI	ACGGC	2 cut(s)	1099, 1384
BcgI	CGANNNNNNTGC	2 cut(s)	1301, 1335
BciT130I	CCWGG	3 cut(s)	613, 1575, 1656
BcoDI	GTCTC	3 cut(s)	15, 233, 1719
BfaI	CTAG	8 cut(s)	164, 474, 603, 981, 1091, 1236, 1364, 1596
BfmI	CTRYAG	1 cut(s)	1763
BfoI	RGCGCY	2 cut(s)	866, 1440
BfrI	CTTAAG	2 cut(s)	188, 329
BglII	AGATCT	1 cut(s)	249
BisI	GCNGC	7 cut(s)	378, 381, 435, 438, 753, 891, 1059
BlsI	GCNGC	7 cut(s)	379, 382, 436, 439, 754, 892, 1060
BmcAI	AGTACT	1 cut(s)	985
Bme1390I	CCNGG	3 cut(s)	613, 1575, 1656
BmeT110I	CYCGRG	2 cut(s)	230, 871
BmiI	GGNNCC	3 cut(s)	286, 1086, 1491
BmrFI	CCNGG	3 cut(s)	613, 1575, 1656
BmsI	GCATC	4 cut(s)	253, 484, 745, 1608
BmtI	GCTAGC	1 cut(s)	1599
BpiI	GAAGAC	2 cut(s)	105, 563
BpmI	CTGGAG	1 cut(s)	1638
Bpu10I	CCTNAGC	2 cut(s)	885, 996
Bpu14I	TTCGAA	1 cut(s)	761
BpuEI	CTTGAG	2 cut(s)	28, 471
Bsa29I	ATCGAT	2 cut(s)	26, 180
BsaHI	GRCGYC	1 cut(s)	8
BsaJI	CCNNGG	6 cut(s)	288, 468, 612, 1065, 1251, 1574
BsaWI	WCCGGW	2 cut(s)	122, 1451
BsaXI	ACNNNNNCTCC	2 cut(s)	1512, 1542
Bsc4I	CCNNNNNNNGG	4 cut(s)	45, 294, 974, 1252
Bse1I	ACTGG	1 cut(s)	1171
Bse3DI	GCAATG	1 cut(s)	480
BseAI	TCCGGA	1 cut(s)	122
BseBI	CCWGG	3 cut(s)	613, 1575, 1656
BseCI	ATCGAT	2 cut(s)	26, 180
BseDI	CCNNGG	6 cut(s)	288, 468, 612, 1065, 1251, 1574
BseGI	GGATG	4 cut(s)	78, 99, 1531, 1584
BseLI	CCNNNNNNNGG	4 cut(s)	45, 294, 974, 1252
BseMI	GCAATG	1 cut(s)	480
BseMII	CTCAG	7 cut(s)	215, 378, 899, 1010, 1122, 1359, 1368
BseNI	ACTGG	1 cut(s)	1171
BseRI	GAGGAG	6 cut(s)	25, 28, 31, 55, 248, 1062
BseSI	GKGCMC	1 cut(s)	670
BseXI	GCAGC	5 cut(s)	421, 424, 739, 902, 1045
BsgI	GTGCAG	1 cut(s)	1576
Bsh1236I	CGCG	3 cut(s)	319, 345, 1067
Bsh1285I	CGRYCG	1 cut(s)	1645
BshFI	GGCC	1 cut(s)	168
BshNI	GGYRCC	1 cut(s)	284
BshVI	ATCGAT	2 cut(s)	26, 180
BsiEI	CGRYCG	1 cut(s)	1645
BsiHKAI	GWGCWC	2 cut(s)	670, 1219
BsiHKCI	CYCGRG	2 cut(s)	230, 871
BsiSI	CCGG	2 cut(s)	123, 1452
BslFI	GGGAC	1 cut(s)	630
BslI	CCNNNNNNNGG	4 cut(s)	45, 294, 974, 1252
BsmAI	GTCTC	3 cut(s)	15, 233, 1719
BsmBI	CGTCTC	1 cut(s)	15
BsmFI	GGGAC	1 cut(s)	630
BsmI	GAATGC	1 cut(s)	1189
BsnI	GGCC	1 cut(s)	168
BsoBI	CYCGRG	2 cut(s)	230, 871
Bsp119I	TTCGAA	1 cut(s)	761
Bsp1286I	GDGCHC	2 cut(s)	670, 1219
Bsp13I	TCCGGA	1 cut(s)	122
Bsp1407I	TGTACA	1 cut(s)	1153
Bsp19I	CCATGG	2 cut(s)	468, 1251
BspACI	CCGC	8 cut(s)	173, 377, 380, 465, 659, 1065, 1067, 1176
BspANI	GGCC	1 cut(s)	168
BspCNI	CTCAG	7 cut(s)	216, 379, 898, 1009, 1123, 1358, 1369
BspDI	ATCGAT	2 cut(s)	26, 180
BspEI	TCCGGA	1 cut(s)	122
BspFNI	CGCG	3 cut(s)	319, 345, 1067
BspHI	TCATGA	1 cut(s)	1632
BspLI	GGNNCC	3 cut(s)	286, 1086, 1491
BspOI	GCTAGC	1 cut(s)	1599
BspPI	GGATC	6 cut(s)	104, 185, 598, 638, 669, 1274
BspT104I	TTCGAA	1 cut(s)	761
BspT107I	GGYRCC	1 cut(s)	284
BspTI	CTTAAG	2 cut(s)	188, 329
BsrDI	GCAATG	1 cut(s)	480
BsrGI	TGTACA	1 cut(s)	1153
BsrI	ACTGG	1 cut(s)	1171
BssECI	CCNNGG	6 cut(s)	288, 468, 612, 1065, 1251, 1574
BssNI	GRCGYC	1 cut(s)	8
BssSI	CACGAG	2 cut(s)	669, 825
BssT1I	CCWWGG	3 cut(s)	288, 468, 1251
Bst2BI	CACGAG	2 cut(s)	669, 825
Bst2UI	CCWGG	3 cut(s)	613, 1575, 1656
Bst4CI	ACNGT	3 cut(s)	430, 910, 1402
Bst6I	CTCTTC	1 cut(s)	1737
BstACI	GRCGYC	1 cut(s)	8
BstAFI	CTTAAG	2 cut(s)	188, 329
BstAUI	TGTACA	1 cut(s)	1153
BstBI	TTCGAA	1 cut(s)	761
BstC8I	GCNNGC	7 cut(s)	511, 1149, 1435, 1559, 1597, 1661, 1665
BstDEI	CTNAG	8 cut(s)	224, 387, 885, 996, 1131, 1345, 1377, 1603
BstDSI	CCRYGG	3 cut(s)	468, 1065, 1251
BstENI	CCTNNNNNAGG	1 cut(s)	43
BstF5I	GGATG	4 cut(s)	78, 99, 1531, 1584
BstFNI	CGCG	3 cut(s)	319, 345, 1067
BstH2I	RGCGCY	2 cut(s)	866, 1440
BstHHI	GCGC	5 cut(s)	268, 347, 457, 865, 1439
BstMAI	GTCTC	3 cut(s)	15, 233, 1719
BstMCI	CGRYCG	1 cut(s)	1645
BstNI	CCWGG	3 cut(s)	613, 1575, 1656
BstNSI	RCATGY	1 cut(s)	632
BstSCI	CCNGG	3 cut(s)	611, 1573, 1654
BstSFI	CTRYAG	1 cut(s)	1763
BstSLI	GKGCMC	1 cut(s)	670
BstUI	CGCG	3 cut(s)	319, 345, 1067
BstV1I	GCAGC	5 cut(s)	421, 424, 739, 902, 1045
BstV2I	GAAGAC	2 cut(s)	105, 563
BstX2I	RGATCY	1 cut(s)	249
BstYI	RGATCY	1 cut(s)	249
Bsu15I	ATCGAT	2 cut(s)	26, 180
BsuRI	GGCC	1 cut(s)	168
BsuTUI	ATCGAT	2 cut(s)	26, 180
BtgI	CCRYGG	3 cut(s)	468, 1065, 1251
BtgZI	GCGATG	1 cut(s)	803
BtsCI	GGATG	4 cut(s)	78, 99, 1531, 1584
BtsI	GCAGTG	1 cut(s)	957
BtsIMutI	CAGTG	2 cut(s)	426, 957
Cac8I	GCNNGC	7 cut(s)	511, 1149, 1435, 1559, 1597, 1661, 1665
CaiI	CAGNNNCTG	1 cut(s)	1028
CciI	TCATGA	1 cut(s)	1632
CfoI	GCGC	5 cut(s)	268, 347, 457, 865, 1439
Cfr42I	CCGCGG	1 cut(s)	1068
ClaI	ATCGAT	2 cut(s)	26, 180
CseI	GACGC	2 cut(s)	351, 1627
Csp6I	GTAC	6 cut(s)	196, 243, 285, 984, 1124, 1154
CspCI	CAANNNNNGTGG	2 cut(s)	1312, 1347
CviAII	CATG	6 cut(s)	469, 629, 641, 947, 1252, 1633
CviQI	GTAC	6 cut(s)	196, 243, 285, 984, 1124, 1154
DdeI	CTNAG	8 cut(s)	224, 387, 885, 996, 1131, 1345, 1377, 1603
Eam1104I	CTCTTC	1 cut(s)	1737
EarI	CTCTTC	1 cut(s)	1737
Ecl136II	GAGCTC	1 cut(s)	1217
Eco130I	CCWWGG	3 cut(s)	288, 468, 1251
Eco24I	GRGCYC	1 cut(s)	1219
Eco47III	AGCGCT	2 cut(s)	864, 1438
Eco53kI	GAGCTC	1 cut(s)	1217
Eco57I	CTGAAG	1 cut(s)	1130
Eco88I	CYCGRG	2 cut(s)	230, 871
EcoICRI	GAGCTC	1 cut(s)	1217
EcoNI	CCTNNNNNAGG	1 cut(s)	43
EcoRII	CCWGG	3 cut(s)	611, 1573, 1654
EcoT14I	CCWWGG	3 cut(s)	288, 468, 1251
EcoT22I	ATGCAT	1 cut(s)	630
EcoT38I	GRGCYC	1 cut(s)	1219
ErhI	CCWWGG	3 cut(s)	288, 468, 1251
Esp3I	CGTCTC	1 cut(s)	15
FaeI	CATG	6 cut(s)	472, 632, 644, 950, 1255, 1636
FaqI	GGGAC	1 cut(s)	630
FatI	CATG	6 cut(s)	468, 628, 640, 946, 1251, 1632
FauI	CCCGC	1 cut(s)	166
Fnu4HI	GCNGC	7 cut(s)	378, 381, 435, 438, 753, 891, 1059
FokI	GGATG	4 cut(s)	65, 86, 1538, 1591
FriOI	GRGCYC	1 cut(s)	1219
Fsp4HI	GCNGC	7 cut(s)	378, 381, 435, 438, 753, 891, 1059
FspBI	CTAG	8 cut(s)	164, 474, 603, 981, 1091, 1236, 1364, 1596
GlaI	GCGC	5 cut(s)	267, 346, 456, 864, 1438
GluI	GCNGC	7 cut(s)	378, 381, 435, 438, 753, 891, 1059
GsuI	CTGGAG	1 cut(s)	1638
HaeII	RGCGCY	2 cut(s)	866, 1440
HaeIII	GGCC	1 cut(s)	168
HapII	CCGG	2 cut(s)	123, 1452
HgaI	GACGC	2 cut(s)	351, 1627
HhaI	GCGC	5 cut(s)	268, 347, 457, 865, 1439
Hin1I	GRCGYC	1 cut(s)	8
Hin1II	CATG	6 cut(s)	472, 632, 644, 950, 1255, 1636
Hin6I	GCGC	5 cut(s)	266, 345, 455, 863, 1437
HinP1I	GCGC	5 cut(s)	266, 345, 455, 863, 1437
HincII	GTYRAC	2 cut(s)	1306, 1621
HindII	GTYRAC	2 cut(s)	1306, 1621
HindIII	AAGCTT	1 cut(s)	1136
HpaI	GTTAAC	1 cut(s)	1306
HpaII	CCGG	2 cut(s)	123, 1452
HphI	GGTGA	3 cut(s)	46, 1365, 1466
Hpy166II	GTNNAC	3 cut(s)	668, 1306, 1621
Hpy8I	GTNNAC	3 cut(s)	668, 1306, 1621
Hpy99I	CGWCG	6 cut(s)	10, 96, 145, 319, 371, 1643
HpyAV	CCTTC	3 cut(s)	995, 1463, 1532
HpyCH4III	ACNGT	3 cut(s)	430, 910, 1402
HpyCH4IV	ACGT	8 cut(s)	8, 110, 366, 1330, 1354, 1416, 1617, 1623
HpyCH4V	TGCA	6 cut(s)	628, 653, 668, 736, 1076, 1557
HpyF3I	CTNAG	8 cut(s)	224, 387, 885, 996, 1131, 1345, 1377, 1603
HpySE526I	ACGT	8 cut(s)	8, 110, 366, 1330, 1354, 1416, 1617, 1623
Hsp92I	GRCGYC	1 cut(s)	8
Hsp92II	CATG	6 cut(s)	472, 632, 644, 950, 1255, 1636
HspAI	GCGC	5 cut(s)	266, 345, 455, 863, 1437
Kpn2I	TCCGGA	1 cut(s)	122
KpnI	GGTACC	1 cut(s)	288
KspAI	GTTAAC	1 cut(s)	1306
KspI	CCGCGG	1 cut(s)	1068
LmnI	GCTCC	7 cut(s)	235, 418, 685, 1037, 1105, 1222, 1657
Lsp1109I	GCAGC	5 cut(s)	421, 424, 739, 902, 1045
LweI	GCATC	4 cut(s)	253, 484, 745, 1608
MaeI	CTAG	8 cut(s)	164, 474, 603, 981, 1091, 1236, 1364, 1596
MaeII	ACGT	8 cut(s)	8, 110, 366, 1330, 1354, 1416, 1617, 1623
MaeIII	GTNAC	8 cut(s)	52, 106, 151, 778, 942, 955, 1162, 1195
MfeI	CAATTG	3 cut(s)	1157, 1386, 1677
MflI	RGATCY	1 cut(s)	249
MhlI	GDGCHC	2 cut(s)	670, 1219
MluCI	AATT	4 cut(s)	450, 1157, 1386, 1677
MlyI	GAGTC	6 cut(s)	235, 553, 813, 863, 1344, 1457
MmeI	TCCRAC	4 cut(s)	319, 440, 568, 1489
Mph1103I	ATGCAT	1 cut(s)	630
MroI	TCCGGA	1 cut(s)	122
MseI	TTAA	6 cut(s)	189, 330, 408, 816, 924, 1305
MslI	CAYNNNNRTG	2 cut(s)	951, 975
MspA1I	CMGCKG	2 cut(s)	659, 1067
MspCI	CTTAAG	2 cut(s)	188, 329
MspI	CCGG	2 cut(s)	123, 1452
MspR9I	CCNGG	3 cut(s)	613, 1575, 1656
MunI	CAATTG	3 cut(s)	1157, 1386, 1677
Mva1269I	GAATGC	1 cut(s)	1189
MvaI	CCWGG	3 cut(s)	613, 1575, 1656
MvnI	CGCG	3 cut(s)	319, 345, 1067
NcoI	CCATGG	2 cut(s)	468, 1251
NheI	GCTAGC	1 cut(s)	1595
NlaIII	CATG	6 cut(s)	472, 632, 644, 950, 1255, 1636
NlaIV	GGNNCC	3 cut(s)	286, 1086, 1491
NmuCI	GTSAC	4 cut(s)	52, 778, 955, 1195
NsiI	ATGCAT	1 cut(s)	630
NspI	RCATGY	1 cut(s)	632
NspV	TTCGAA	1 cut(s)	761
PaeR7I	CTCGAG	1 cut(s)	230
PagI	TCATGA	1 cut(s)	1632
PctI	GAATGC	1 cut(s)	1189
PfeI	GAWTC	7 cut(s)	16, 145, 311, 1381, 1421, 1549, 1647
PkrI	GCNGC	7 cut(s)	379, 382, 436, 439, 754, 892, 1060
PleI	GAGTC	6 cut(s)	234, 553, 812, 863, 1343, 1456
PpsI	GAGTC	6 cut(s)	234, 553, 812, 863, 1343, 1456
Psp124BI	GAGCTC	1 cut(s)	1219
Psp6I	CCWGG	3 cut(s)	611, 1573, 1654
PspGI	CCWGG	3 cut(s)	611, 1573, 1654
PspN4I	GGNNCC	3 cut(s)	286, 1086, 1491
PstNI	CAGNNNCTG	1 cut(s)	1028
PsuI	RGATCY	1 cut(s)	249
RsaI	GTAC	6 cut(s)	197, 244, 286, 985, 1125, 1155
RsaNI	GTAC	6 cut(s)	196, 243, 285, 984, 1124, 1154
RseI	CAYNNNNRTG	2 cut(s)	951, 975
SacI	GAGCTC	1 cut(s)	1219
SacII	CCGCGG	1 cut(s)	1068
SaqAI	TTAA	6 cut(s)	189, 330, 408, 816, 924, 1305
SatI	GCNGC	7 cut(s)	378, 381, 435, 438, 753, 891, 1059
ScaI	AGTACT	1 cut(s)	985
SchI	GAGTC	6 cut(s)	235, 553, 813, 863, 1344, 1457
ScrFI	CCNGG	3 cut(s)	613, 1575, 1656
SduI	GDGCHC	2 cut(s)	670, 1219
SfaNI	GCATC	4 cut(s)	253, 484, 745, 1608
SfcI	CTRYAG	1 cut(s)	1763
Sfr274I	CTCGAG	1 cut(s)	230
Sfr303I	CCGCGG	1 cut(s)	1068
SfuI	TTCGAA	1 cut(s)	761
SgrBI	CCGCGG	1 cut(s)	1068
SlaI	CTCGAG	1 cut(s)	230
SmiMI	CAYNNNNRTG	2 cut(s)	951, 975
SmlI	CTYRAG	5 cut(s)	43, 188, 230, 329, 486
SmoI	CTYRAG	5 cut(s)	43, 188, 230, 329, 486
Sse9I	AATT	4 cut(s)	450, 1157, 1386, 1677
SsiI	CCGC	8 cut(s)	173, 377, 380, 465, 659, 1065, 1067, 1176
SspMI	CTAG	8 cut(s)	164, 474, 603, 981, 1091, 1236, 1364, 1596
SstI	GAGCTC	1 cut(s)	1219
StyD4I	CCNGG	3 cut(s)	611, 1573, 1654
StyI	CCWWGG	3 cut(s)	288, 468, 1251
TaaI	ACNGT	3 cut(s)	430, 910, 1402
TaiI	ACGT	8 cut(s)	11, 113, 369, 1333, 1357, 1419, 1620, 1626
TaqI	TCGA	9 cut(s)	26, 180, 231, 369, 761, 1014, 1230, 1272, 1645
TaqII	GACCGA	1 cut(s)	1631
TasI	AATT	4 cut(s)	450, 1157, 1386, 1677
TatI	WGTACW	3 cut(s)	983, 1123, 1153
TauI	GCSGC	2 cut(s)	380, 383
TfiI	GAWTC	7 cut(s)	16, 145, 311, 1381, 1421, 1549, 1647
Tru1I	TTAA	6 cut(s)	189, 330, 408, 816, 924, 1305
Tru9I	TTAA	6 cut(s)	189, 330, 408, 816, 924, 1305
TscAI	CASTG	2 cut(s)	433, 964
TseFI	GTSAC	4 cut(s)	52, 778, 955, 1195
TseI	GCWGC	5 cut(s)	434, 437, 752, 890, 1058
Tsp45I	GTSAC	4 cut(s)	52, 778, 955, 1195
TspDTI	ATGAA	7 cut(s)	715, 785, 809, 1282, 1621, 1626, 1704
TspGWI	ACGGA	5 cut(s)	71, 109, 170, 462, 797
TspRI	CASTG	2 cut(s)	433, 964
Vha464I	CTTAAG	2 cut(s)	188, 329
VneI	GTGCAC	1 cut(s)	666
XagI	CCTNNNNNAGG	1 cut(s)	43
XbaI	TCTAGA	1 cut(s)	1363
XceI	RCATGY	1 cut(s)	632
XhoI	CTCGAG	1 cut(s)	230
XspI	CTAG	8 cut(s)	164, 474, 603, 981, 1091, 1236, 1364, 1596
ZraI	GACGTC	1 cut(s)	9
ZrmI	AGTACT	1 cut(s)	985
Zsp2I	ATGCAT	1 cut(s)	630

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.