Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0013945

Physical Location & Seq

Genomic Coordinates Reverse (-)

15528016 .. 15530885

Gene Structure 2870 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G134300.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1800 bp

ATGGCCACGTCAGCACCCCACGCCCTACGCACCCCATTTCTCCGAAACCCCACCCTCTCTCTCTCCTCCAAGCCTACTCTGTCCTCCGTTTTCCCCGTCTCTCTCTCCTCGCGCCGCCGGGCCGCACCGCGGCTCGTGGTGGTGCTCTCCGCTGCCGGGCTCGACGCCAAGCCCACCGTTCTAGTCGCCGAGAAGCTCGGCGAGGCCGGGCTCGACCTCCTCAAGGAATTCGCCAATGTCGACTGCTCCTACAACCTCAGCCCCGAAGAGCTCTGCACCAAGATCTCGCTTTGTGACGCGTTGATCGTGCGGAGCGGGACCAAGGTCAGCCGCGAGGTGTTCGAGTCTTCCGGCGGCAGGTTGAAGGTCGTCGGTAGGGCCGGCGTCGGCATCGACAACGTGGATCTGGGGGCGGCGACTGAGTTTGGATGCTTGGTGGTGAATGCGCCGACGGCTAACACCGTCGCCGCCGCCGAGCACGGGATTGCTCTCTTGACCGCCATGGCTCGCAACGTCGCTCAGGCTGACGCGTCTGTGAAAGCCGGGAAGTGGCAGCGGAACAAGTATGTTGGTGTTTCTCTTGTTGGGAAGACCTTGGCTGTGATGGGATTTGGGAAAGTTGGATCTGAAGTGGCTCGGCGTGCCAAGGGGCTCGGCATGCATGTGATTGCGCACGACCCATATGCACCCGCGGATCGTGCTCGCGCCATTGGTGTGGAGCTTGTGAGCTTTGATGAGGCTTTGGCATCTGCTGATTTCATATCCTTGCACATGCCTCTCACTCCCGCCACTTCAAAGGTTCTCAACGACGAGACTTTTGCGAAGATGAAGAAGGGAGTTAGAATCGTGAACGTTGCGCGTGGGGGAGTTATTGACGAAGATGCACTCGTCAGGGCACTCGACGGTGGAATTGTTGCTCAGGCTGCTCTTGATGTGTTCACTGTGGAGCCACCACCACAAGGCAACACGTTGGTGTTGCATGAGAGAGTTACTGCAACTCCTCACCTTGGTGCCAGTACCATGGAGGCACAGGAAGGTGTGGCCGTTGAAATTGCTGAAGCTGTCGTTGGAGCCTTGAAAGGGGAGCTTGCTGCCACTGCAGTCAATGCACCAATGGTTCCTGCTGAGGTGTTGACAGAACTGAAGCCATATGTTGTACTTGCTGAGAAACTTGGGAGACTGGCAGTCCAACTAGTGGCTGGAGGCAGTGGTGTGAAAACTGTCAAAGTTTCATATGCCTCAGCTAGGGCTCCTGATGACCTTGACACTAGGCTGCTTCGAGCCATGATTACTAAGGGTCTCATTGAGCCCATTTCCGACGTTTTCGTGAACCTGGTAAATGCTGATTTCACTGCTAAACAGAGAGGACTAAGAATAACAGAAGAGCGAACCGTTCTCGATGGTTCACCCGAGAGCCCACTCGATTCAATCCAAGTTCAGATTGCCAACGTGGAATCCAAATTTGCCAGTGCCATATCAGAGAGTGGAGAGATTACAGTGGAGGGTCGGGTTAAGGATGGGGTTCCTCACTTGACGAAGGTTGGATCCTTCGAAGTTGATGTGAGTTTGGAAGGTAGCATAATACTCTGCAGACAGGTTGATCAGCCGGGTATGATCGGAACAGTTGGAAGCATTTTAGGAGAGGAGAATGTGAATGTCAGTTTCATGAGCGTTGGAAGGATTGCGCCAAGAAAGCAGGCTGTGATGGCAATTGGGGTGGATGACCAACCCAGCAAGCCAGCTTTGAAAAGGATTGGAGATGTTCCAGCCATTGAAGAGTTTGTTTTCCTCAAGTTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000166 GO:0003006 GO:0003674 GO:0005488 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0007275 GO:0008144 GO:0008150 GO:0009507 GO:0009532 GO:0009536 GO:0009553 GO:0009555 GO:0009561 GO:0009570 GO:0009790 GO:0009791 GO:0009793 GO:0010154 GO:0016020 GO:0017076 GO:0022414 GO:0030554 GO:0032501 GO:0032502 GO:0032553 GO:0032555 GO:0032559 GO:0035639 GO:0036094 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0048229 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0061458 GO:0097159 GO:0097367 GO:1901265 GO:1901363

KEGG Pathways

Metabolic & Signaling

ko00260 ko00680 ko01100 ko01120 ko01130 ko01200 ko01230 map00260 map00680 map01100 map01120 map01130 map01200 map01230

Pfam Domains

Protein Families

2-Hacid_dh 2-Hacid_dh_C ACT

Protein Analysis

600

Amino Acids

62.78

Weight (kDa)

6.16

Isoelectric Point (pI)

34.36

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013945)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G19480 AT4G34200
fragaria_vesca	FvH4_2g05310
malus_domestica	MD05G1088400.v1.1
prunus_persica	Prupe.8G134300_v2.0.a1 Prupe.8G134300_v2.0.a1
pyrus_communis	pycom05g08770
rosa_chinensis	RchiOBHm_Chr6g0255451
rosa_laevigata	RLG00000014836
rosa_multiflora	Rmu_sc0002360.1_g000009
rosa_roxburghii	Rroxscaffold_7G00209970
rosa_rugosa	Rorug05G0558900
rosa_samantha	Rh6AG074800 Rh6BG069400 Rh6CG068400 Rh6DG065200
rosa_wichuraiana	Rw6G006650

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	672
Acc36I	ACCTGC	1 cut(s)	348
AccB1I	GGYRCC	1 cut(s)	1010
AccB7I	CCANNNNNTGG	1 cut(s)	1195
AccBSI	CCGCTC	1 cut(s)	315
AccI	GTMKAC	1 cut(s)	240
AccII	CGCG	8 cut(s)	112, 130, 299, 333, 530, 692, 705, 859
AclI	AACGTT	1 cut(s)	852
AclWI	GGATC	5 cut(s)	411, 631, 702, 1539, 1552
AcoI	YGGCCR	2 cut(s)	3, 1041
AcsI	RAATTY	2 cut(s)	227, 1460
AcuI	CTGAAG	3 cut(s)	648, 1077, 1163
AcyI	GRCGYC	2 cut(s)	165, 384
AfaI	GTAC	2 cut(s)	1018, 1158
AflIII	ACRYGT	3 cut(s)	297, 528, 966
AgsI	TTSAA	7 cut(s)	364, 795, 1049, 1078, 1428, 1747, 1775
AhdI	GACNNNNNGTC	1 cut(s)	1184
AhlI	ACTAGT	1 cut(s)	1192
AjiI	CACGTC	1 cut(s)	9
AjnI	CCWGG	1 cut(s)	1332
AjuI	GAANNNNNNNTTGG	2 cut(s)	1050, 1082
AleI	CACNNNNGTG	2 cut(s)	971, 1008
AluBI	AGCT	8 cut(s)	196, 271, 721, 729, 1061, 1087, 1244, 1742
AluI	AGCT	8 cut(s)	196, 271, 721, 729, 1061, 1087, 1244, 1742
Alw21I	GWGCWC	4 cut(s)	147, 273, 480, 703
Alw26I	GTCTC	4 cut(s)	103, 806, 1171, 1304
AlwI	GGATC	5 cut(s)	411, 631, 702, 1539, 1552
Ama87I	CYCGRG	1 cut(s)	1409
AoxI	GGCC	5 cut(s)	3, 120, 204, 378, 1041
ApeKI	GCWGC	5 cut(s)	152, 553, 923, 1091, 1273
ApoI	RAATTY	2 cut(s)	227, 1460
ArsI	GACNNNNNNTTYG	2 cut(s)	800, 832
AspLEI	GCGC	6 cut(s)	114, 448, 673, 707, 859, 1687
AspS9I	GGNCC	3 cut(s)	120, 318, 378
AsuC2I	CCSGG	5 cut(s)	119, 157, 208, 544, 1608
AsuHPI	GGTGA	3 cut(s)	451, 995, 1398
AsuII	TTCGAA	1 cut(s)	1551
AvaI	CYCGRG	1 cut(s)	1409
AvaII	GGWCC	1 cut(s)	318
BaeGI	GKGCMC	1 cut(s)	898
BalI	TGGCCA	1 cut(s)	5
BamHI	GGATCC	1 cut(s)	1544
BanI	GGYRCC	1 cut(s)	1010
BanII	GRGCYC	7 cut(s)	162, 213, 273, 654, 1252, 1311, 1418
BauI	CACGAG	1 cut(s)	134
BbsI	GAAGAC	2 cut(s)	339, 596
Bbv12I	GWGCWC	4 cut(s)	147, 273, 480, 703
BbvCI	CCTCAGC	3 cut(s)	257, 1125, 1240
BbvI	GCAGC	5 cut(s)	139, 565, 910, 1078, 1260
BccI	CCATC	4 cut(s)	598, 1394, 1511, 1699
BceAI	ACGGC	2 cut(s)	468, 1028
BcgI	CGANNNNNNTGC	4 cut(s)	665, 699, 800, 834
BciT130I	CCWGG	1 cut(s)	1334
BclI	TGATCA	1 cut(s)	1600
BcnI	CCSGG	5 cut(s)	119, 157, 208, 544, 1608
BcoDI	GTCTC	4 cut(s)	103, 806, 1171, 1304
BcuI	ACTAGT	1 cut(s)	1192
BfaI	CTAG	4 cut(s)	182, 1193, 1245, 1269
BfmI	CTRYAG	2 cut(s)	1098, 1588
BfuAI	ACCTGC	1 cut(s)	348
BglII	AGATCT	1 cut(s)	282
Bme1390I	CCNGG	6 cut(s)	119, 157, 208, 544, 1334, 1608
Bme18I	GGWCC	1 cut(s)	318
BmeRI	GACNNNNNGTC	1 cut(s)	1184
BmeT110I	CYCGRG	1 cut(s)	1409
BmgBI	CACGTC	1 cut(s)	9
BmgT120I	GGNCC	3 cut(s)	120, 318, 378
BmiI	GGNNCC	8 cut(s)	319, 948, 1012, 1072, 1119, 1251, 1524, 1546
BmrFI	CCNGG	6 cut(s)	119, 157, 208, 544, 1334, 1608
BmsI	GCATC	4 cut(s)	399, 419, 755, 871
BoxI	GACNNNNGTC	1 cut(s)	323
BpiI	GAAGAC	2 cut(s)	339, 596
BpmI	CTGGAG	1 cut(s)	1221
Bpu10I	CCTNAGC	5 cut(s)	257, 519, 918, 1125, 1240
Bpu14I	TTCGAA	1 cut(s)	1551
BpuEI	CTTGAG	2 cut(s)	206, 1775
BpuMI	CCSGG	5 cut(s)	119, 157, 208, 544, 1608
BsaHI	GRCGYC	2 cut(s)	165, 384
BsaI	GGTCTC	1 cut(s)	1304
BsaJI	CCNNGG	8 cut(s)	128, 321, 501, 594, 645, 690, 1006, 1020
BsaXI	ACNNNNNCTCC	2 cut(s)	982, 1012
Bse118I	RCCGGY	1 cut(s)	380
Bse1I	ACTGG	3 cut(s)	1014, 1185, 1467
BseBI	CCWGG	1 cut(s)	1334
BseDI	CCNNGG	8 cut(s)	128, 321, 501, 594, 645, 690, 1006, 1020
BseGI	GGATG	3 cut(s)	434, 1522, 1726
BseMII	CTCAG	7 cut(s)	271, 411, 533, 932, 1116, 1155, 1254
BseNI	ACTGG	3 cut(s)	1014, 1185, 1467
BseRI	GAGGAG	5 cut(s)	55, 97, 209, 990, 1658
BseSI	GKGCMC	1 cut(s)	898
BseXI	GCAGC	5 cut(s)	139, 565, 910, 1078, 1260
BseYI	CCCAGC	1 cut(s)	1730
BsgI	GTGCAG	1 cut(s)	259
Bsh1236I	CGCG	8 cut(s)	112, 130, 299, 333, 530, 692, 705, 859
BshFI	GGCC	5 cut(s)	5, 122, 206, 380, 1043
BshNI	GGYRCC	1 cut(s)	1010
BsiHKAI	GWGCWC	4 cut(s)	147, 273, 480, 703
BsiHKCI	CYCGRG	1 cut(s)	1409
BsiSI	CCGG	7 cut(s)	118, 156, 207, 351, 381, 543, 1607
BslFI	GGGAC	1 cut(s)	331
BsmAI	GTCTC	4 cut(s)	103, 806, 1171, 1304
BsmBI	CGTCTC	1 cut(s)	103
BsmFI	GGGAC	1 cut(s)	331
BsmI	GAATGC	1 cut(s)	448
BsnI	GGCC	5 cut(s)	5, 122, 206, 380, 1043
Bso31I	GGTCTC	1 cut(s)	1304
BsoBI	CYCGRG	1 cut(s)	1409
Bsp119I	TTCGAA	1 cut(s)	1551
Bsp143I	GATC	8 cut(s)	282, 303, 403, 623, 694, 1544, 1600, 1614
Bsp19I	CCATGG	2 cut(s)	501, 1020
BspANI	GGCC	5 cut(s)	5, 122, 206, 380, 1043
BspCNI	CTCAG	7 cut(s)	270, 412, 532, 931, 1117, 1156, 1253
BspFNI	CGCG	8 cut(s)	112, 130, 299, 333, 530, 692, 705, 859
BspHI	TCATGA	1 cut(s)	1665
BspLI	GGNNCC	8 cut(s)	319, 948, 1012, 1072, 1119, 1251, 1524, 1546
BspMAI	CTGCAG	2 cut(s)	1102, 1592
BspMI	ACCTGC	1 cut(s)	348
BspPI	GGATC	5 cut(s)	411, 631, 702, 1539, 1552
BspQI	GCTCTTC	2 cut(s)	261, 1377
BspT104I	TTCGAA	1 cut(s)	1551
BspT107I	GGYRCC	1 cut(s)	1010
BspTNI	GGTCTC	1 cut(s)	1304
BsrBI	CCGCTC	1 cut(s)	315
BsrFI	RCCGGY	1 cut(s)	380
BsrI	ACTGG	3 cut(s)	1014, 1185, 1467
BssAI	RCCGGY	1 cut(s)	380
BssECI	CCNNGG	8 cut(s)	128, 321, 501, 594, 645, 690, 1006, 1020
BssMI	GATC	8 cut(s)	282, 303, 403, 623, 694, 1544, 1600, 1614
BssNI	GRCGYC	2 cut(s)	165, 384
BssSI	CACGAG	1 cut(s)	134
BssT1I	CCWWGG	6 cut(s)	321, 501, 594, 645, 1006, 1020
Bst2BI	CACGAG	1 cut(s)	134
Bst2UI	CCWGG	1 cut(s)	1334
Bst4CI	ACNGT	8 cut(s)	178, 463, 905, 943, 1222, 1393, 1498, 1624
Bst6I	CTCTTC	3 cut(s)	261, 1377, 1770
BstACI	GRCGYC	2 cut(s)	165, 384
BstAPI	GCANNNNNTGC	1 cut(s)	1106
BstBI	TTCGAA	1 cut(s)	1551
BstC8I	GCNNGC	9 cut(s)	382, 508, 642, 659, 703, 1089, 1698, 1736, 1740
BstDEI	CTNAG	9 cut(s)	257, 420, 519, 918, 1125, 1164, 1240, 1293, 1370
BstDSI	CCRYGG	4 cut(s)	128, 501, 690, 1020
BstENI	CCTNNNNNAGG	2 cut(s)	221, 1243
BstF5I	GGATG	3 cut(s)	434, 1522, 1726
BstFNI	CGCG	8 cut(s)	112, 130, 299, 333, 530, 692, 705, 859
BstHHI	GCGC	6 cut(s)	114, 448, 673, 707, 859, 1687
BstKTI	GATC	8 cut(s)	285, 306, 406, 626, 697, 1547, 1603, 1617
BstMAI	GTCTC	4 cut(s)	103, 806, 1171, 1304
BstMBI	GATC	8 cut(s)	282, 303, 403, 623, 694, 1544, 1600, 1614
BstNI	CCWGG	1 cut(s)	1334
BstNSI	RCATGY	3 cut(s)	661, 665, 775
BstPAI	GACNNNNGTC	1 cut(s)	323
BstSCI	CCNGG	6 cut(s)	117, 155, 206, 542, 1332, 1606
BstSFI	CTRYAG	2 cut(s)	1098, 1588
BstSLI	GKGCMC	1 cut(s)	898
BstUI	CGCG	8 cut(s)	112, 130, 299, 333, 530, 692, 705, 859
BstV1I	GCAGC	5 cut(s)	139, 565, 910, 1078, 1260
BstV2I	GAAGAC	2 cut(s)	339, 596
BstX2I	RGATCY	4 cut(s)	282, 403, 623, 1544
BstXI	CCANNNNNNTGG	2 cut(s)	715, 1021
BstYI	RGATCY	4 cut(s)	282, 403, 623, 1544
BsuRI	GGCC	5 cut(s)	5, 122, 206, 380, 1043
BtgI	CCRYGG	4 cut(s)	128, 501, 690, 1020
BtrI	CACGTC	1 cut(s)	9
BtsCI	GGATG	3 cut(s)	434, 1522, 1726
BtsI	GCAGTG	3 cut(s)	1095, 1213, 1350
BtsIMutI	CAGTG	6 cut(s)	939, 1095, 1213, 1350, 1474, 1503
BveI	ACCTGC	1 cut(s)	348
Cac8I	GCNNGC	9 cut(s)	382, 508, 642, 659, 703, 1089, 1698, 1736, 1740
CciI	TCATGA	1 cut(s)	1665
CfoI	GCGC	6 cut(s)	114, 448, 673, 707, 859, 1687
Cfr10I	RCCGGY	1 cut(s)	380
Cfr13I	GGNCC	3 cut(s)	120, 318, 378
Cfr42I	CCGCGG	2 cut(s)	131, 693
CseI	GACGC	5 cut(s)	173, 305, 373, 519, 536
CsiI	ACCWGGT	1 cut(s)	1332
Csp6I	GTAC	2 cut(s)	1017, 1157
CspCI	CAANNNNNGTGG	2 cut(s)	1698, 1733
CviAII	CATG	8 cut(s)	502, 658, 662, 772, 980, 1021, 1285, 1666
CviQI	GTAC	2 cut(s)	1017, 1157
DdeI	CTNAG	9 cut(s)	257, 420, 519, 918, 1125, 1164, 1240, 1293, 1370
DpnI	GATC	8 cut(s)	284, 305, 405, 625, 696, 1546, 1602, 1616
DpnII	GATC	8 cut(s)	282, 303, 403, 623, 694, 1544, 1600, 1614
DriI	GACNNNNNGTC	1 cut(s)	1184
EaeI	YGGCCR	2 cut(s)	3, 1041
Eam1104I	CTCTTC	3 cut(s)	261, 1377, 1770
Eam1105I	GACNNNNNGTC	1 cut(s)	1184
EarI	CTCTTC	3 cut(s)	261, 1377, 1770
Ecl136II	GAGCTC	1 cut(s)	271
Eco130I	CCWWGG	6 cut(s)	321, 501, 594, 645, 1006, 1020
Eco24I	GRGCYC	7 cut(s)	162, 213, 273, 654, 1252, 1311, 1418
Eco31I	GGTCTC	1 cut(s)	1304
Eco47I	GGWCC	1 cut(s)	318
Eco53kI	GAGCTC	1 cut(s)	271
Eco57I	CTGAAG	3 cut(s)	648, 1077, 1163
Eco88I	CYCGRG	1 cut(s)	1409
EcoICRI	GAGCTC	1 cut(s)	271
EcoNI	CCTNNNNNAGG	2 cut(s)	221, 1243
EcoRI	GAATTC	1 cut(s)	227
EcoRII	CCWGG	1 cut(s)	1332
EcoT14I	CCWWGG	6 cut(s)	321, 501, 594, 645, 1006, 1020
EcoT22I	ATGCAT	1 cut(s)	663
EcoT38I	GRGCYC	7 cut(s)	162, 213, 273, 654, 1252, 1311, 1418
ErhI	CCWWGG	6 cut(s)	321, 501, 594, 645, 1006, 1020
Esp3I	CGTCTC	1 cut(s)	103
FaeI	CATG	8 cut(s)	505, 661, 665, 775, 983, 1024, 1288, 1669
FalI	AAGNNNNNCTT	2 cut(s)	1071, 1103
FaqI	GGGAC	1 cut(s)	331
FatI	CATG	8 cut(s)	501, 657, 661, 771, 979, 1020, 1284, 1665
FauI	CCCGC	3 cut(s)	308, 697, 793
FauNDI	CATATG	3 cut(s)	682, 1150, 1234
FbaI	TGATCA	1 cut(s)	1600
FblI	GTMKAC	1 cut(s)	240
FokI	GGATG	3 cut(s)	441, 1529, 1733
FriOI	GRGCYC	7 cut(s)	162, 213, 273, 654, 1252, 1311, 1418
FspBI	CTAG	4 cut(s)	182, 1193, 1245, 1269
FspI	TGCGCA	1 cut(s)	672
GlaI	GCGC	6 cut(s)	113, 447, 672, 706, 858, 1686
GsaI	CCCAGC	1 cut(s)	1734
GsuI	CTGGAG	1 cut(s)	1221
HaeIII	GGCC	5 cut(s)	5, 122, 206, 380, 1043
HapII	CCGG	7 cut(s)	118, 156, 207, 351, 381, 543, 1607
HgaI	GACGC	5 cut(s)	173, 305, 373, 519, 536
HhaI	GCGC	6 cut(s)	114, 448, 673, 707, 859, 1687
Hin1I	GRCGYC	2 cut(s)	165, 384
Hin1II	CATG	8 cut(s)	505, 661, 665, 775, 983, 1024, 1288, 1669
Hin6I	GCGC	6 cut(s)	112, 446, 671, 705, 857, 1685
HinP1I	GCGC	6 cut(s)	112, 446, 671, 705, 857, 1685
HincII	GTYRAC	2 cut(s)	241, 1134
HindII	GTYRAC	2 cut(s)	241, 1134
HinfI	GANTC	4 cut(s)	344, 843, 1424, 1454
HpaII	CCGG	7 cut(s)	118, 156, 207, 351, 381, 543, 1607
HphI	GGTGA	3 cut(s)	451, 995, 1398
Hpy166II	GTNNAC	6 cut(s)	241, 850, 939, 1134, 1330, 1406
Hpy188I	TCNGA	6 cut(s)	44, 628, 1318, 1440, 1480, 1619
Hpy188III	TCNNGA	7 cut(s)	493, 847, 929, 1253, 1327, 1397, 1666
Hpy8I	GTNNAC	6 cut(s)	241, 850, 939, 1134, 1330, 1406
Hpy99I	CGWCG	9 cut(s)	167, 374, 389, 454, 467, 518, 812, 905, 1322
HpyAV	CCTTC	7 cut(s)	358, 826, 1028, 1531, 1558, 1565, 1671
HpyCH4III	ACNGT	8 cut(s)	178, 463, 905, 943, 1222, 1393, 1498, 1624
HpyCH4IV	ACGT	7 cut(s)	8, 399, 513, 852, 968, 1320, 1449
HpyF3I	CTNAG	9 cut(s)	257, 420, 519, 918, 1125, 1164, 1240, 1293, 1370
HpySE526I	ACGT	7 cut(s)	8, 399, 513, 852, 968, 1320, 1449
Hsp92I	GRCGYC	2 cut(s)	165, 384
Hsp92II	CATG	8 cut(s)	505, 661, 665, 775, 983, 1024, 1288, 1669
HspAI	GCGC	6 cut(s)	112, 446, 671, 705, 857, 1685
KroI	GCCGGC	1 cut(s)	380
KroNI	GCCGGC	1 cut(s)	382
Ksp22I	TGATCA	1 cut(s)	1600
KspI	CCGCGG	2 cut(s)	131, 693
Kzo9I	GATC	8 cut(s)	282, 303, 403, 623, 694, 1544, 1600, 1614
LguI	GCTCTTC	2 cut(s)	261, 1377
LmnI	GCTCC	7 cut(s)	251, 312, 718, 946, 1070, 1084, 1255
Lsp1109I	GCAGC	5 cut(s)	139, 565, 910, 1078, 1260
LweI	GCATC	4 cut(s)	399, 419, 755, 871
MabI	ACCWGGT	1 cut(s)	1332
MaeI	CTAG	4 cut(s)	182, 1193, 1245, 1269
MaeII	ACGT	7 cut(s)	8, 399, 513, 852, 968, 1320, 1449
MaeIII	GTNAC	2 cut(s)	293, 988
MalI	GATC	8 cut(s)	284, 305, 405, 625, 696, 1546, 1602, 1616
MbiI	CCGCTC	1 cut(s)	315
MboI	GATC	8 cut(s)	282, 303, 403, 623, 694, 1544, 1600, 1614
MboII	GAAGA	8 cut(s)	278, 339, 601, 835, 841, 890, 1394, 1787
MfeI	CAATTG	1 cut(s)	1710
MflI	RGATCY	4 cut(s)	282, 403, 623, 1544
MlsI	TGGCCA	1 cut(s)	5
MluCI	AATT	5 cut(s)	227, 909, 1050, 1460, 1710
MluI	ACGCGT	2 cut(s)	297, 528
MluNI	TGGCCA	1 cut(s)	5
MlyI	GAGTC	1 cut(s)	353
MmeI	TCCRAC	7 cut(s)	601, 1048, 1213, 1341, 1522, 1606, 1654
Mox20I	TGGCCA	1 cut(s)	5
Mph1103I	ATGCAT	1 cut(s)	663
MroNI	GCCGGC	1 cut(s)	380
MscI	TGGCCA	1 cut(s)	5
MseI	TTAA	1 cut(s)	1512
MslI	CAYNNNNRTG	4 cut(s)	662, 713, 971, 1008
Msp20I	TGGCCA	1 cut(s)	5
MspA1I	CMGCKG	4 cut(s)	130, 152, 556, 692
MspI	CCGG	7 cut(s)	118, 156, 207, 351, 381, 543, 1607
MspR9I	CCNGG	6 cut(s)	119, 157, 208, 544, 1334, 1608
MunI	CAATTG	1 cut(s)	1710
Mva1269I	GAATGC	1 cut(s)	448
MvaI	CCWGG	1 cut(s)	1334
MvnI	CGCG	8 cut(s)	112, 130, 299, 333, 530, 692, 705, 859
NaeI	GCCGGC	1 cut(s)	382
NciI	CCSGG	5 cut(s)	119, 157, 208, 544, 1608
NcoI	CCATGG	2 cut(s)	501, 1020
NdeI	CATATG	3 cut(s)	682, 1150, 1234
NdeII	GATC	8 cut(s)	282, 303, 403, 623, 694, 1544, 1600, 1614
NgoMIV	GCCGGC	1 cut(s)	380
NlaIII	CATG	8 cut(s)	505, 661, 665, 775, 983, 1024, 1288, 1669
NlaIV	GGNNCC	8 cut(s)	319, 948, 1012, 1072, 1119, 1251, 1524, 1546
NmeAIII	GCCGAG	5 cut(s)	177, 214, 499, 616, 633
NmuCI	GTSAC	1 cut(s)	293
NsbI	TGCGCA	1 cut(s)	672
NsiI	ATGCAT	1 cut(s)	663
NspI	RCATGY	3 cut(s)	661, 665, 775
NspV	TTCGAA	1 cut(s)	1551
OliI	CACNNNNGTG	2 cut(s)	971, 1008
PaeI	GCATGC	1 cut(s)	661
PagI	TCATGA	1 cut(s)	1665
PciSI	GCTCTTC	2 cut(s)	261, 1377
PcsI	WCGNNNNNNNCGW	3 cut(s)	237, 303, 471
PctI	GAATGC	1 cut(s)	448
PdiI	GCCGGC	1 cut(s)	382
PfeI	GAWTC	3 cut(s)	843, 1424, 1454
PflMI	CCANNNNNTGG	1 cut(s)	1195
PleI	GAGTC	1 cut(s)	352
PpsI	GAGTC	1 cut(s)	352
PshAI	GACNNNNGTC	1 cut(s)	323
Psp124BI	GAGCTC	1 cut(s)	273
Psp1406I	AACGTT	1 cut(s)	852
Psp6I	CCWGG	1 cut(s)	1332
PspFI	CCCAGC	1 cut(s)	1730
PspGI	CCWGG	1 cut(s)	1332
PspN4I	GGNNCC	8 cut(s)	319, 948, 1012, 1072, 1119, 1251, 1524, 1546
PspPI	GGNCC	3 cut(s)	120, 318, 378
PstI	CTGCAG	2 cut(s)	1102, 1592
PsuI	RGATCY	4 cut(s)	282, 403, 623, 1544
RsaI	GTAC	2 cut(s)	1018, 1158
RsaNI	GTAC	2 cut(s)	1017, 1157
RseI	CAYNNNNRTG	4 cut(s)	662, 713, 971, 1008
SacI	GAGCTC	1 cut(s)	273
SacII	CCGCGG	2 cut(s)	131, 693
SalI	GTCGAC	1 cut(s)	239
SapI	GCTCTTC	2 cut(s)	261, 1377
SaqAI	TTAA	1 cut(s)	1512
Sau3AI	GATC	8 cut(s)	282, 303, 403, 623, 694, 1544, 1600, 1614
Sau96I	GGNCC	3 cut(s)	120, 318, 378
SchI	GAGTC	1 cut(s)	353
ScrFI	CCNGG	6 cut(s)	119, 157, 208, 544, 1334, 1608
SexAI	ACCWGGT	1 cut(s)	1332
SfaNI	GCATC	4 cut(s)	399, 419, 755, 871
SfcI	CTRYAG	2 cut(s)	1098, 1588
Sfr303I	CCGCGG	2 cut(s)	131, 693
SfuI	TTCGAA	1 cut(s)	1551
SgrBI	CCGCGG	2 cut(s)	131, 693
SinI	GGWCC	1 cut(s)	318
SmiMI	CAYNNNNRTG	4 cut(s)	662, 713, 971, 1008
SmlI	CTYRAG	2 cut(s)	221, 1790
SmoI	CTYRAG	2 cut(s)	221, 1790
SpeI	ACTAGT	1 cut(s)	1192
SphI	GCATGC	1 cut(s)	661
Sse9I	AATT	5 cut(s)	227, 909, 1050, 1460, 1710
SspMI	CTAG	4 cut(s)	182, 1193, 1245, 1269
SstI	GAGCTC	1 cut(s)	273
StyD4I	CCNGG	6 cut(s)	117, 155, 206, 542, 1332, 1606
StyI	CCWWGG	6 cut(s)	321, 501, 594, 645, 1006, 1020
TaaI	ACNGT	8 cut(s)	178, 463, 905, 943, 1222, 1393, 1498, 1624
TaiI	ACGT	7 cut(s)	11, 402, 516, 855, 971, 1323, 1452
TasI	AATT	5 cut(s)	227, 909, 1050, 1460, 1710
TatI	WGTACW	1 cut(s)	1156
TauI	GCSGC	8 cut(s)	117, 125, 133, 333, 357, 416, 470, 473
TfiI	GAWTC	3 cut(s)	843, 1424, 1454
Tru1I	TTAA	1 cut(s)	1512
Tru9I	TTAA	1 cut(s)	1512
TscAI	CASTG	6 cut(s)	946, 1102, 1213, 1357, 1474, 1503
TseFI	GTSAC	1 cut(s)	293
TseI	GCWGC	5 cut(s)	152, 553, 923, 1091, 1273
Tsp45I	GTSAC	1 cut(s)	293
TspDTI	ATGAA	4 cut(s)	748, 842, 1221, 1654
TspGWI	ACGGA	1 cut(s)	76
TspRI	CASTG	6 cut(s)	946, 1102, 1213, 1357, 1474, 1503
Van91I	CCANNNNNTGG	1 cut(s)	1195
VpaK11BI	GGWCC	1 cut(s)	318
XagI	CCTNNNNNAGG	2 cut(s)	221, 1243
XapI	RAATTY	2 cut(s)	227, 1460
XceI	RCATGY	3 cut(s)	661, 665, 775
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1196
XmiI	GTMKAC	1 cut(s)	240
XspI	CTAG	4 cut(s)	182, 1193, 1245, 1269
Zsp2I	ATGCAT	1 cut(s)	663

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.