Domain of unknown function (DUF3475)
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G23160 |
| fragaria_vesca | FvH4_4g03090 |
| malus_domestica | MD13G1210100.v1.1 MD16G1213000.v1.1 |
| prunus_persica | Prupe.1G034600_v2.0.a1 |
| pyrus_communis | pycom13g18270 pycom16g17890 |
| rosa_chinensis | RchiOBHm_Chr4g0391361 |
| rosa_laevigata | RLG00000009869 |
| rosa_multiflora | Rmu_sc0005322.1_g000036 |
| rosa_roxburghii | Rroxscaffold_5G00337110 |
| rosa_rugosa | Rorug03G0335700 |
| rosa_samantha | Rh4AG036800 Rh4BG031500 Rh4CG040100 Rh4DG034500 |
| rosa_wichuraiana | Rw4G002890 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 2 cut(s) | 373, 1041 |
| AccI | GTMKAC | 1 cut(s) | 1306 |
| AccII | CGCG | 3 cut(s) | 871, 1514, 1529 |
| AciI | CCGC | 2 cut(s) | 827, 857 |
| AclI | AACGTT | 2 cut(s) | 156, 1401 |
| AclWI | GGATC | 2 cut(s) | 1096, 1336 |
| AcuI | CTGAAG | 3 cut(s) | 539, 1053, 1397 |
| AfaI | GTAC | 3 cut(s) | 703, 1009, 1148 |
| AflII | CTTAAG | 2 cut(s) | 1142, 1220 |
| AflIII | ACRYGT | 2 cut(s) | 869, 1512 |
| AgsI | TTSAA | 9 cut(s) | 74, 536, 596, 722, 772, 886, 1077, 1210, 1246 |
| AjiI | CACGTC | 1 cut(s) | 625 |
| AjnI | CCWGG | 1 cut(s) | 907 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 714, 746 |
| Alw26I | GTCTC | 3 cut(s) | 112, 298, 610 |
| AlwI | GGATC | 2 cut(s) | 1096, 1336 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1451 |
| ApeKI | GCWGC | 4 cut(s) | 568, 1372, 1451, 1580 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1137 |
| AspLEI | GCGC | 1 cut(s) | 1529 |
| AsuHPI | GGTGA | 3 cut(s) | 167, 173, 965 |
| AsuII | TTCGAA | 1 cut(s) | 144 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1122, 1154 |
| BbsI | GAAGAC | 2 cut(s) | 1217, 1448 |
| BbvI | GCAGC | 4 cut(s) | 580, 1384, 1438, 1592 |
| BccI | CCATC | 3 cut(s) | 466, 635, 974 |
| BceAI | ACGGC | 2 cut(s) | 303, 1560 |
| BciT130I | CCWGG | 1 cut(s) | 909 |
| BcoDI | GTCTC | 3 cut(s) | 112, 298, 610 |
| BfaI | CTAG | 6 cut(s) | 327, 339, 690, 1014, 1227, 1274 |
| BfmI | CTRYAG | 1 cut(s) | 543 |
| BfrI | CTTAAG | 2 cut(s) | 1142, 1220 |
| BfuAI | ACCTGC | 2 cut(s) | 373, 1041 |
| BglII | AGATCT | 2 cut(s) | 204, 283 |
| BisI | GCNGC | 4 cut(s) | 569, 1373, 1452, 1581 |
| BlsI | GCNGC | 4 cut(s) | 570, 1374, 1453, 1582 |
| Bme1390I | CCNGG | 1 cut(s) | 909 |
| BmgBI | CACGTC | 1 cut(s) | 625 |
| BmiI | GGNNCC | 1 cut(s) | 656 |
| BmrFI | CCNGG | 1 cut(s) | 909 |
| BmsI | GCATC | 1 cut(s) | 580 |
| BpiI | GAAGAC | 2 cut(s) | 1217, 1448 |
| Bpu14I | TTCGAA | 1 cut(s) | 144 |
| BpuEI | CTTGAG | 2 cut(s) | 38, 799 |
| BsaBI | GATNNNNATC | 1 cut(s) | 270 |
| BsaJI | CCNNGG | 1 cut(s) | 222 |
| BsaWI | WCCGGW | 1 cut(s) | 1344 |
| Bse1I | ACTGG | 2 cut(s) | 104, 1289 |
| Bse8I | GATNNNNATC | 1 cut(s) | 270 |
| BseBI | CCWGG | 1 cut(s) | 909 |
| BseDI | CCNNGG | 1 cut(s) | 222 |
| BseGI | GGATG | 4 cut(s) | 766, 865, 921, 1023 |
| BseJI | GATNNNNATC | 1 cut(s) | 270 |
| BseMII | CTCAG | 1 cut(s) | 288 |
| BseNI | ACTGG | 2 cut(s) | 104, 1289 |
| BseRI | GAGGAG | 2 cut(s) | 859, 1260 |
| BseXI | GCAGC | 4 cut(s) | 580, 1384, 1438, 1592 |
| BsgI | GTGCAG | 1 cut(s) | 894 |
| Bsh1236I | CGCG | 3 cut(s) | 871, 1514, 1529 |
| BsiSI | CCGG | 1 cut(s) | 1345 |
| BslFI | GGGAC | 1 cut(s) | 913 |
| BsmAI | GTCTC | 3 cut(s) | 112, 298, 610 |
| BsmFI | GGGAC | 1 cut(s) | 913 |
| BsmI | GAATGC | 1 cut(s) | 493 |
| Bsp119I | TTCGAA | 1 cut(s) | 144 |
| Bsp143I | GATC | 8 cut(s) | 204, 283, 778, 1088, 1180, 1235, 1257, 1341 |
| BspACI | CCGC | 2 cut(s) | 827, 857 |
| BspCNI | CTCAG | 1 cut(s) | 289 |
| BspFNI | CGCG | 3 cut(s) | 871, 1514, 1529 |
| BspLI | GGNNCC | 1 cut(s) | 656 |
| BspMI | ACCTGC | 2 cut(s) | 373, 1041 |
| BspPI | GGATC | 2 cut(s) | 1096, 1336 |
| BspQI | GCTCTTC | 1 cut(s) | 69 |
| BspT104I | TTCGAA | 1 cut(s) | 144 |
| BspTI | CTTAAG | 2 cut(s) | 1142, 1220 |
| BsrI | ACTGG | 2 cut(s) | 104, 1289 |
| BssECI | CCNNGG | 1 cut(s) | 222 |
| BssMI | GATC | 8 cut(s) | 204, 283, 778, 1088, 1180, 1235, 1257, 1341 |
| BssNAI | GTATAC | 1 cut(s) | 1307 |
| Bst1107I | GTATAC | 1 cut(s) | 1307 |
| Bst2UI | CCWGG | 1 cut(s) | 909 |
| Bst4CI | ACNGT | 4 cut(s) | 185, 697, 727, 1304 |
| Bst6I | CTCTTC | 4 cut(s) | 69, 117, 623, 767 |
| BstAFI | CTTAAG | 2 cut(s) | 1142, 1220 |
| BstBI | TTCGAA | 1 cut(s) | 144 |
| BstC8I | GCNNGC | 3 cut(s) | 60, 873, 1320 |
| BstDEI | CTNAG | 5 cut(s) | 87, 210, 297, 635, 1232 |
| BstF5I | GGATG | 4 cut(s) | 766, 865, 921, 1023 |
| BstFNI | CGCG | 3 cut(s) | 871, 1514, 1529 |
| BstHHI | GCGC | 1 cut(s) | 1529 |
| BstKTI | GATC | 8 cut(s) | 207, 286, 781, 1091, 1183, 1238, 1260, 1344 |
| BstMAI | GTCTC | 3 cut(s) | 112, 298, 610 |
| BstMBI | GATC | 8 cut(s) | 204, 283, 778, 1088, 1180, 1235, 1257, 1341 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 610, 803, 1274, 1328, 1533 |
| BstNI | CCWGG | 1 cut(s) | 909 |
| BstNSI | RCATGY | 2 cut(s) | 389, 1067 |
| BstSCI | CCNGG | 1 cut(s) | 907 |
| BstSFI | CTRYAG | 1 cut(s) | 543 |
| BstUI | CGCG | 3 cut(s) | 871, 1514, 1529 |
| BstV1I | GCAGC | 4 cut(s) | 580, 1384, 1438, 1592 |
| BstV2I | GAAGAC | 2 cut(s) | 1217, 1448 |
| BstX2I | RGATCY | 3 cut(s) | 204, 283, 1088 |
| BstYI | RGATCY | 3 cut(s) | 204, 283, 1088 |
| BstZ17I | GTATAC | 1 cut(s) | 1307 |
| BtrI | CACGTC | 1 cut(s) | 625 |
| BtsCI | GGATG | 4 cut(s) | 766, 865, 921, 1023 |
| BveI | ACCTGC | 2 cut(s) | 373, 1041 |
| Cac8I | GCNNGC | 3 cut(s) | 60, 873, 1320 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1451 |
| CfoI | GCGC | 1 cut(s) | 1529 |
| CseI | GACGC | 1 cut(s) | 1274 |
| Csp6I | GTAC | 3 cut(s) | 702, 1008, 1147 |
| CviAII | CATG | 4 cut(s) | 386, 922, 1064, 1339 |
| CviQI | GTAC | 3 cut(s) | 702, 1008, 1147 |
| DdeI | CTNAG | 5 cut(s) | 87, 210, 297, 635, 1232 |
| DpnI | GATC | 8 cut(s) | 206, 285, 780, 1090, 1182, 1237, 1259, 1343 |
| DpnII | GATC | 8 cut(s) | 204, 283, 778, 1088, 1180, 1235, 1257, 1341 |
| Eam1104I | CTCTTC | 4 cut(s) | 69, 117, 623, 767 |
| EarI | CTCTTC | 4 cut(s) | 69, 117, 623, 767 |
| Eco57I | CTGAAG | 3 cut(s) | 539, 1053, 1397 |
| EcoRII | CCWGG | 1 cut(s) | 907 |
| FaeI | CATG | 4 cut(s) | 389, 925, 1067, 1342 |
| FaqI | GGGAC | 1 cut(s) | 913 |
| FatI | CATG | 4 cut(s) | 385, 921, 1063, 1338 |
| FauI | CCCGC | 1 cut(s) | 820 |
| FblI | GTMKAC | 1 cut(s) | 1306 |
| Fnu4HI | GCNGC | 4 cut(s) | 569, 1373, 1452, 1581 |
| FokI | GGATG | 4 cut(s) | 773, 872, 928, 1030 |
| Fsp4HI | GCNGC | 4 cut(s) | 569, 1373, 1452, 1581 |
| FspBI | CTAG | 6 cut(s) | 327, 339, 690, 1014, 1227, 1274 |
| GlaI | GCGC | 1 cut(s) | 1528 |
| GluI | GCNGC | 4 cut(s) | 569, 1373, 1452, 1581 |
| HapII | CCGG | 1 cut(s) | 1345 |
| HgaI | GACGC | 1 cut(s) | 1274 |
| HhaI | GCGC | 1 cut(s) | 1529 |
| Hin1II | CATG | 4 cut(s) | 389, 925, 1067, 1342 |
| Hin6I | GCGC | 1 cut(s) | 1527 |
| HinP1I | GCGC | 1 cut(s) | 1527 |
| HincII | GTYRAC | 2 cut(s) | 811, 1056 |
| HindII | GTYRAC | 2 cut(s) | 811, 1056 |
| HindIII | AAGCTT | 9 cut(s) | 12, 212, 251, 302, 551, 588, 602, 1136, 1463 |
| HinfI | GANTC | 9 cut(s) | 74, 132, 271, 455, 631, 839, 1021, 1378, 1417 |
| HpaI | GTTAAC | 2 cut(s) | 811, 1056 |
| HpaII | CCGG | 1 cut(s) | 1345 |
| HphI | GGTGA | 3 cut(s) | 167, 173, 965 |
| Hpy166II | GTNNAC | 4 cut(s) | 811, 867, 1056, 1307 |
| Hpy188III | TCNNGA | 3 cut(s) | 71, 575, 1280 |
| Hpy8I | GTNNAC | 4 cut(s) | 811, 867, 1056, 1307 |
| Hpy99I | CGWCG | 1 cut(s) | 1268 |
| HpyAV | CCTTC | 2 cut(s) | 188, 233 |
| HpyCH4III | ACNGT | 4 cut(s) | 185, 697, 727, 1304 |
| HpyCH4IV | ACGT | 3 cut(s) | 156, 624, 1401 |
| HpyCH4V | TGCA | 4 cut(s) | 875, 1105, 1112, 1580 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 610, 803, 1274, 1328, 1533 |
| HpyF3I | CTNAG | 5 cut(s) | 87, 210, 297, 635, 1232 |
| HpySE526I | ACGT | 3 cut(s) | 156, 624, 1401 |
| Hsp92II | CATG | 4 cut(s) | 389, 925, 1067, 1342 |
| HspAI | GCGC | 1 cut(s) | 1527 |
| KspAI | GTTAAC | 2 cut(s) | 811, 1056 |
| Kzo9I | GATC | 8 cut(s) | 204, 283, 778, 1088, 1180, 1235, 1257, 1341 |
| LguI | GCTCTTC | 1 cut(s) | 69 |
| LmnI | GCTCC | 2 cut(s) | 1273, 1327 |
| LpnPI | CCDG | 9 cut(s) | 117, 378, 605, 861, 894, 921, 1036, 1270, 1358 |
| Lsp1109I | GCAGC | 4 cut(s) | 580, 1384, 1438, 1592 |
| LweI | GCATC | 1 cut(s) | 580 |
| MaeI | CTAG | 6 cut(s) | 327, 339, 690, 1014, 1227, 1274 |
| MaeII | ACGT | 3 cut(s) | 156, 624, 1401 |
| MaeIII | GTNAC | 3 cut(s) | 356, 763, 1194 |
| MalI | GATC | 8 cut(s) | 206, 285, 780, 1090, 1182, 1237, 1259, 1343 |
| MboI | GATC | 8 cut(s) | 204, 283, 778, 1088, 1180, 1235, 1257, 1341 |
| MfeI | CAATTG | 1 cut(s) | 126 |
| MflI | RGATCY | 3 cut(s) | 204, 283, 1088 |
| MluCI | AATT | 2 cut(s) | 126, 886 |
| MluI | ACGCGT | 2 cut(s) | 869, 1512 |
| MlyI | GAGTC | 2 cut(s) | 640, 1411 |
| MmeI | TCCRAC | 2 cut(s) | 968, 1500 |
| MnlI | CCTC | 6 cut(s) | 217, 743, 837, 1079, 1161, 1281 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1137 |
| MslI | CAYNNNNRTG | 1 cut(s) | 390 |
| MspCI | CTTAAG | 2 cut(s) | 1142, 1220 |
| MspI | CCGG | 1 cut(s) | 1345 |
| MspR9I | CCNGG | 1 cut(s) | 909 |
| MunI | CAATTG | 1 cut(s) | 126 |
| Mva1269I | GAATGC | 1 cut(s) | 493 |
| MvaI | CCWGG | 1 cut(s) | 909 |
| MvnI | CGCG | 3 cut(s) | 871, 1514, 1529 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 610, 803, 1274, 1328, 1533 |
| NdeII | GATC | 8 cut(s) | 204, 283, 778, 1088, 1180, 1235, 1257, 1341 |
| NlaIII | CATG | 4 cut(s) | 389, 925, 1067, 1342 |
| NlaIV | GGNNCC | 1 cut(s) | 656 |
| NmeAIII | GCCGAG | 1 cut(s) | 247 |
| NmuCI | GTSAC | 1 cut(s) | 763 |
| NspI | RCATGY | 2 cut(s) | 389, 1067 |
| NspV | TTCGAA | 1 cut(s) | 144 |
| PciSI | GCTCTTC | 1 cut(s) | 69 |
| PctI | GAATGC | 1 cut(s) | 493 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1137 |
| PfeI | GAWTC | 7 cut(s) | 74, 132, 271, 455, 839, 1021, 1378 |
| PkrI | GCNGC | 4 cut(s) | 570, 1374, 1453, 1582 |
| PleI | GAGTC | 2 cut(s) | 639, 1411 |
| PpsI | GAGTC | 2 cut(s) | 639, 1411 |
| Psp1406I | AACGTT | 2 cut(s) | 156, 1401 |
| Psp6I | CCWGG | 1 cut(s) | 907 |
| PspGI | CCWGG | 1 cut(s) | 907 |
| PspN4I | GGNNCC | 1 cut(s) | 656 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 354, 386 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1451 |
| PsuI | RGATCY | 3 cut(s) | 204, 283, 1088 |
| RsaI | GTAC | 3 cut(s) | 703, 1009, 1148 |
| RsaNI | GTAC | 3 cut(s) | 702, 1008, 1147 |
| RseI | CAYNNNNRTG | 1 cut(s) | 390 |
| SapI | GCTCTTC | 1 cut(s) | 69 |
| SatI | GCNGC | 4 cut(s) | 569, 1373, 1452, 1581 |
| Sau3AI | GATC | 8 cut(s) | 204, 283, 778, 1088, 1180, 1235, 1257, 1341 |
| SchI | GAGTC | 2 cut(s) | 640, 1411 |
| ScrFI | CCNGG | 1 cut(s) | 909 |
| SfaNI | GCATC | 1 cut(s) | 580 |
| SfcI | CTRYAG | 1 cut(s) | 543 |
| SfuI | TTCGAA | 1 cut(s) | 144 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 390 |
| SmlI | CTYRAG | 4 cut(s) | 53, 814, 1142, 1220 |
| SmoI | CTYRAG | 4 cut(s) | 53, 814, 1142, 1220 |
| Sse9I | AATT | 2 cut(s) | 126, 886 |
| SsiI | CCGC | 2 cut(s) | 827, 857 |
| SspMI | CTAG | 6 cut(s) | 327, 339, 690, 1014, 1227, 1274 |
| StyD4I | CCNGG | 1 cut(s) | 907 |
| TaaI | ACNGT | 4 cut(s) | 185, 697, 727, 1304 |
| TaiI | ACGT | 3 cut(s) | 159, 627, 1404 |
| TaqI | TCGA | 4 cut(s) | 144, 842, 1256, 1368 |
| TasI | AATT | 2 cut(s) | 126, 886 |
| TatI | WGTACW | 2 cut(s) | 701, 1007 |
| TfiI | GAWTC | 7 cut(s) | 74, 132, 271, 455, 839, 1021, 1378 |
| TseFI | GTSAC | 1 cut(s) | 763 |
| TseI | GCWGC | 4 cut(s) | 568, 1372, 1451, 1580 |
| Tsp45I | GTSAC | 1 cut(s) | 763 |
| TspDTI | ATGAA | 7 cut(s) | 408, 539, 807, 910, 953, 990, 1560 |
| Vha464I | CTTAAG | 2 cut(s) | 1142, 1220 |
| XceI | RCATGY | 2 cut(s) | 389, 1067 |
| XmiI | GTMKAC | 1 cut(s) | 1306 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1137 |
| XspI | CTAG | 6 cut(s) | 327, 339, 690, 1014, 1227, 1274 |