MD13G1210100.v1.1

Protein of unknown function (DUF668)

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr13
Physical Location & Seq
Reverse (-)
19542670 .. 19546040
3371 bp
Loading structure...
UTR
Exon/CDS
Intron
MD13G1210100.v1.1.491

Sequence Viewer

Length: 1800 bp
ATGGTTGCAGAGCCTTGGATTTTGAAGATGGGTAACCAGGTAAGCTCCAATCTCAAGCACGCTCTTCCTTTTCAACCTTCGAAGAAATCATCAGTCTCCAAATCTCAACCCGCCGCTGGCGCCAAAACCCGGAAGCAGACCGTTGGCATTCTCTCCTTCGAGGTCGCCAATGTCATGTCCAAGACCGTCCATCTCCACAAGTCCCTCACGGACTCCGAGATCTCGAAGCTCAAAAACGAGATCTTGAAGTCCGAGGGAGTGCTCAACCTGGTCTCCGCTGACGGGGCCTATCTTCTCGAGCTCGCCATGGCGGAGAAGCTGGAGGAGCTGAACCGGGTCGCCGCCGTCGTGGGGAGGCTCGGGAAGCGGTGCGTCGAGCCGGCTCTGCAGGGGTTCGAGCATGTCTATGCTGACCTCGTTAATGGGGTCATTGATGTGAAGGAGTTGGGGTTTTTGGTAAAAGACATGGAGGGTATGGTGAGAAAAATGGAGAGGTATGTGAATGCTACTTCCAATTTGTACAGCGAAATGGAGGTTTTGAATGAGTTGGAGCAGGCCACCAAGAAATTTCAGCACAATCAGCACGAGGAGAGCAAAAGGGCTTTTGAGCAGAAGCTCGTTTGGCAAAAGCAGGATGTCAGGCATCTCAAGGATGTCTCTCTTTGGAACCAAACGTATGATAAAGTTGTGGAATTGCTCGCCAGGACGGTCTGTACTATTTTCGCCACAATTCAGGCTGTTTTCGGAGACTCTGTTTTGAGCAAGGACCGTGTTGGGTTGATTGGTGGAGCTTCACCGCCTACGGTGTCCGGTCAGATTGATGTGAGGAGGGTTTCTCAGGTGGCTTCTGAGCCGTTAAAGAGGGTTGCTAGTAGGAAAGAAGGGTTGCATTCGGGTCCGGTTGAGAAGGCTGTGGTGCTGAAAAAGGGGTCATCTTTTAAGCCTCAGTTTGATTCGAGGAGAGGTGAATTTGGGGCGTTTCGAGCGGAGGATTTGAACCCTCCGTGCGGAGCAAGCCCCGGGAGGATTTTCATGGACTGCCTTAGAATGAGCGGTACAGTTGATGATGATGATTATGGTGGTGCTGGTAATTATGATGACAGGAGTAGCCAAATTTCGGGTTGCAGTGTTGCAAATGGCGGTTTAAGGAGAGAGTATCCGAACCATTCGGGTTGTTTTAATCGAGCACAAACGGGTGTTCACCTTCAATCCAAGTGTGGCGGAACGAATGGTGGTGCACGGTTTGGTCCCAAGAGTAAGTTAATGGTTTATGCCCCTCCTTCTACTGTGGGAGGCTCTGCTCTAGCTTTACATTACGCAAATGTTATAATTGTTATAGAGAAGTTGCTTCGATATCCTTATCTAGTCGGCGAGGAAGCGAGGGACGATTTGTATCATATGTTACCAACGAGTGTAAGGATGGGTCTGAGGACTAATCTCAAGTCCTATGCCAAGAATATGGCCATATATGATGCGCCTCTTGCGCATGATTGGAAGGAGACTCTTGACGGGATTTTGAGGTGGCTCGCCCCATTGGCGCACAACATGATGAGATGGCAGAGCGAGCGTAATTTTGAGCAAACGCAGATTGTTACGCGCACAAATGTTCTTCTGCTACAGACATTGTATTTTGCTGATCGAGACAAGACAGAGGCAGCTATTTGTAAGCTGCTTGTTGGGTTGAATTATATATGCCGCTACGAGCATCAGCAAAATGCATTACTGGATTGTGCAAGTAGTTTTGATTTTGAAGACTGCATGGAGTGGCAAATGCAATGCGGGGCTTCATTTGTTGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

600

Amino Acids

66.6

Weight (kDa)

8.43

Isoelectric Point (pI)

42.68

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF3475 PF11961 50 - 106 6.6e-25 Domain of unknown function (DUF3475)
DUF668 PF05003 429 - 518 3.5e-34 Protein of unknown function (DUF668)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0014582)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G23160
fragaria_vesca FvH4_4g03090
malus_domestica MD13G1210100.v1.1 MD16G1213000.v1.1
prunus_persica Prupe.1G034600_v2.0.a1
pyrus_communis pycom13g18270 pycom16g17890
rosa_chinensis RchiOBHm_Chr4g0391361
rosa_laevigata RLG00000009869
rosa_multiflora Rmu_sc0005322.1_g000036
rosa_roxburghii Rroxscaffold_5G00337110
rosa_rugosa Rorug03G0335700
rosa_samantha Rh4AG036800 Rh4BG031500 Rh4CG040100 Rh4DG034500
rosa_wichuraiana Rw4G002890

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1328
Acc16I TGCGCA 1 cut(s) 1485
AccB1I GGYRCC 1 cut(s) 119
AccBSI CCGCTC 2 cut(s) 986, 1053
AccII CGCG 1 cut(s) 1597
AcoI YGGCCR 1 cut(s) 1461
AcsI RAATTY 3 cut(s) 566, 968, 1113
AcyI GRCGYC 1 cut(s) 120
AfaI GTAC 3 cut(s) 521, 715, 1057
AfiI CCNNNNNNNGG 6 cut(s) 116, 129, 282, 351, 1007, 1117
AgsI TTSAA 8 cut(s) 25, 74, 247, 541, 997, 1208, 1684, 1751
AjnI CCWGG 3 cut(s) 36, 267, 701
Alw21I GWGCWC 4 cut(s) 264, 303, 1189, 1240
Alw26I GTCTC 6 cut(s) 100, 277, 661, 741, 1493, 1635
Alw44I GTGCAC 1 cut(s) 1236
Ama87I CYCGRG 3 cut(s) 296, 359, 1019
AoxI GGCC 3 cut(s) 285, 555, 1461
ApaLI GTGCAC 1 cut(s) 1236
ApeKI GCWGC 2 cut(s) 1655, 1669
ApoI RAATTY 3 cut(s) 566, 968, 1113
AspLEI GCGC 5 cut(s) 122, 1477, 1486, 1540, 1599
AspS9I GGNCC 4 cut(s) 285, 766, 896, 1247
AsuC2I CCSGG 4 cut(s) 130, 335, 1020, 1021
AsuHPI GGTGA 4 cut(s) 490, 786, 977, 1193
AsuII TTCGAA 1 cut(s) 80
AvaI CYCGRG 3 cut(s) 296, 359, 1019
AvaII GGWCC 3 cut(s) 766, 896, 1247
BaeGI GKGCMC 1 cut(s) 1240
BalI TGGCCA 1 cut(s) 1463
BanI GGYRCC 1 cut(s) 119
BanII GRGCYC 1 cut(s) 303
BauI CACGAG 1 cut(s) 584
BbsI GAAGAC 1 cut(s) 1758
Bbv12I GWGCWC 4 cut(s) 264, 303, 1189, 1240
BbvI GCAGC 2 cut(s) 1656, 1667
BccI CCATC 4 cut(s) 22, 198, 1414, 1548
BceAI ACGGC 2 cut(s) 329, 838
BciT130I CCWGG 3 cut(s) 38, 269, 703
BciVI GTATCC 1 cut(s) 1167
BcnI CCSGG 4 cut(s) 130, 335, 1020, 1021
BcoDI GTCTC 6 cut(s) 100, 277, 661, 741, 1493, 1635
BfaI CTAG 3 cut(s) 870, 1304, 1364
BfmI CTRYAG 2 cut(s) 386, 1616
BfoI RGCGCY 1 cut(s) 123
BfuI GTATCC 1 cut(s) 1167
BglI GCCNNNNNGGC 1 cut(s) 1535
BglII AGATCT 2 cut(s) 219, 240
BisI GCNGC 5 cut(s) 114, 342, 1656, 1670, 1696
BlsI GCNGC 5 cut(s) 115, 343, 1657, 1671, 1697
Bme1390I CCNGG 7 cut(s) 38, 130, 269, 335, 703, 1020, 1021
Bme18I GGWCC 3 cut(s) 766, 896, 1247
BmeT110I CYCGRG 3 cut(s) 296, 359, 1019
BmgT120I GGNCC 4 cut(s) 285, 766, 896, 1247
BmiI GGNNCC 5 cut(s) 121, 286, 668, 897, 1249
BmrFI CCNGG 7 cut(s) 38, 130, 269, 335, 703, 1020, 1021
BmsI GCATC 3 cut(s) 652, 1462, 1714
BpiI GAAGAC 1 cut(s) 1758
BplI GAGNNNNNCTC 2 cut(s) 820, 852
BpmI CTGGAG 1 cut(s) 341
Bpu14I TTCGAA 1 cut(s) 80
BpuEI CTTGAG 3 cut(s) 38, 632, 1424
BpuMI CCSGG 4 cut(s) 130, 335, 1020, 1021
BsaBI GATNNNNATC 1 cut(s) 1392
BsaHI GRCGYC 1 cut(s) 120
BsaI GGTCTC 1 cut(s) 277
BsaJI CCNNGG 5 cut(s) 14, 252, 306, 1018, 1019
BsaWI WCCGGW 2 cut(s) 809, 898
BsaXI ACNNNNNCTCC 6 cut(s) 257, 287, 434, 464, 738, 768
Bsc4I CCNNNNNNNGG 6 cut(s) 116, 129, 282, 351, 1007, 1117
Bse118I RCCGGY 1 cut(s) 379
Bse1I ACTGG 1 cut(s) 1728
Bse3DI GCAATG 1 cut(s) 1781
Bse8I GATNNNNATC 1 cut(s) 1392
BseBI CCWGG 3 cut(s) 38, 269, 703
BseDI CCNNGG 5 cut(s) 14, 252, 306, 1018, 1019
BseGI GGATG 3 cut(s) 640, 658, 1425
BseJI GATNNNNATC 1 cut(s) 1392
BseLI CCNNNNNNNGG 6 cut(s) 116, 129, 282, 351, 1007, 1117
BseMI GCAATG 1 cut(s) 1781
BseMII CTCAG 4 cut(s) 840, 851, 959, 1418
BseNI ACTGG 1 cut(s) 1728
BseRI GAGGAG 4 cut(s) 338, 602, 841, 973
BseSI GKGCMC 1 cut(s) 1240
BseXI GCAGC 2 cut(s) 1656, 1667
Bsh1236I CGCG 1 cut(s) 1597
BshFI GGCC 3 cut(s) 287, 557, 1463
BshNI GGYRCC 1 cut(s) 119
BsiHKAI GWGCWC 4 cut(s) 264, 303, 1189, 1240
BsiHKCI CYCGRG 3 cut(s) 296, 359, 1019
BsiSI CCGG 6 cut(s) 130, 334, 380, 810, 899, 1020
BslFI GGGAC 3 cut(s) 187, 1233, 1397
BslI CCNNNNNNNGG 6 cut(s) 116, 129, 282, 351, 1007, 1117
BsmAI GTCTC 6 cut(s) 100, 277, 661, 741, 1493, 1635
BsmFI GGGAC 3 cut(s) 187, 1233, 1397
BsmI GAATGC 3 cut(s) 147, 508, 889
BsnI GGCC 3 cut(s) 287, 557, 1463
Bso31I GGTCTC 1 cut(s) 277
BsoBI CYCGRG 3 cut(s) 296, 359, 1019
Bsp119I TTCGAA 1 cut(s) 80
Bsp1286I GDGCHC 4 cut(s) 264, 303, 1189, 1240
Bsp1407I TGTACA 1 cut(s) 519
Bsp143I GATC 3 cut(s) 219, 240, 1636
Bsp19I CCATGG 1 cut(s) 306
BspANI GGCC 3 cut(s) 287, 557, 1463
BspCNI CTCAG 4 cut(s) 841, 850, 958, 1419
BspFNI CGCG 1 cut(s) 1597
BspLI GGNNCC 5 cut(s) 121, 286, 668, 897, 1249
BspMAI CTGCAG 1 cut(s) 390
BspQI GCTCTTC 1 cut(s) 69
BspT104I TTCGAA 1 cut(s) 80
BspT107I GGYRCC 1 cut(s) 119
BspTNI GGTCTC 1 cut(s) 277
BsrBI CCGCTC 2 cut(s) 986, 1053
BsrDI GCAATG 1 cut(s) 1781
BsrFI RCCGGY 1 cut(s) 379
BsrGI TGTACA 1 cut(s) 519
BsrI ACTGG 1 cut(s) 1728
BssAI RCCGGY 1 cut(s) 379
BssECI CCNNGG 5 cut(s) 14, 252, 306, 1018, 1019
BssMI GATC 3 cut(s) 219, 240, 1636
BssNI GRCGYC 1 cut(s) 120
BssSI CACGAG 1 cut(s) 584
BssT1I CCWWGG 2 cut(s) 14, 306
Bst2BI CACGAG 1 cut(s) 584
Bst2UI CCWGG 3 cut(s) 38, 269, 703
Bst4CI ACNGT 8 cut(s) 142, 187, 709, 770, 805, 1060, 1242, 1288
Bst6I CTCTTC 1 cut(s) 69
BstACI GRCGYC 1 cut(s) 120
BstAUI TGTACA 1 cut(s) 519
BstBI TTCGAA 1 cut(s) 80
BstC8I GCNNGC 9 cut(s) 60, 118, 303, 381, 555, 699, 1015, 1527, 1565
BstDEI CTNAG 5 cut(s) 837, 849, 945, 1043, 1427
BstDSI CCRYGG 1 cut(s) 306
BstEII GGTNACC 1 cut(s) 32
BstF5I GGATG 3 cut(s) 640, 658, 1425
BstFNI CGCG 1 cut(s) 1597
BstH2I RGCGCY 1 cut(s) 123
BstHHI GCGC 5 cut(s) 122, 1477, 1486, 1540, 1599
BstKTI GATC 3 cut(s) 222, 243, 1639
BstMAI GTCTC 6 cut(s) 100, 277, 661, 741, 1493, 1635
BstMBI GATC 3 cut(s) 219, 240, 1636
BstNI CCWGG 3 cut(s) 38, 269, 703
BstNSI RCATGY 1 cut(s) 404
BstPI GGTNACC 1 cut(s) 32
BstSCI CCNGG 7 cut(s) 36, 128, 267, 333, 701, 1018, 1019
BstSFI CTRYAG 2 cut(s) 386, 1616
BstSLI GKGCMC 1 cut(s) 1240
BstUI CGCG 1 cut(s) 1597
BstV1I GCAGC 2 cut(s) 1656, 1667
BstV2I GAAGAC 1 cut(s) 1758
BstX2I RGATCY 2 cut(s) 219, 240
BstXI CCANNNNNNTGG 1 cut(s) 1459
BstYI RGATCY 2 cut(s) 219, 240
BsuI GTATCC 1 cut(s) 1167
BsuRI GGCC 3 cut(s) 287, 557, 1463
BtgI CCRYGG 1 cut(s) 306
BtsCI GGATG 3 cut(s) 640, 658, 1425
BtsI GCAGTG 1 cut(s) 1132
BtsIMutI CAGTG 1 cut(s) 1132
Cac8I GCNNGC 9 cut(s) 60, 118, 303, 381, 555, 699, 1015, 1527, 1565
CfoI GCGC 5 cut(s) 122, 1477, 1486, 1540, 1599
Cfr10I RCCGGY 1 cut(s) 379
Cfr13I GGNCC 4 cut(s) 285, 766, 896, 1247
Cfr9I CCCGGG 1 cut(s) 1019
CseI GACGC 1 cut(s) 361
CsiI ACCWGGT 2 cut(s) 36, 267
Csp6I GTAC 3 cut(s) 520, 714, 1056
CviAII CATG 8 cut(s) 175, 307, 401, 466, 1033, 1487, 1546, 1759
CviQI GTAC 3 cut(s) 520, 714, 1056
DdeI CTNAG 5 cut(s) 837, 849, 945, 1043, 1427
DinI GGCGCC 1 cut(s) 121
DpnI GATC 3 cut(s) 221, 242, 1638
DpnII GATC 3 cut(s) 219, 240, 1636
EaeI YGGCCR 1 cut(s) 1461
Eam1104I CTCTTC 1 cut(s) 69
EarI CTCTTC 1 cut(s) 69
EciI GGCGGA 2 cut(s) 326, 1236
Ecl136II GAGCTC 1 cut(s) 301
Eco130I CCWWGG 2 cut(s) 14, 306
Eco24I GRGCYC 1 cut(s) 303
Eco31I GGTCTC 1 cut(s) 277
Eco32I GATATC 1 cut(s) 1355
Eco47I GGWCC 3 cut(s) 766, 896, 1247
Eco53kI GAGCTC 1 cut(s) 301
Eco88I CYCGRG 3 cut(s) 296, 359, 1019
Eco91I GGTNACC 1 cut(s) 32
EcoICRI GAGCTC 1 cut(s) 301
EcoO109I RGGNCCY 1 cut(s) 285
EcoO65I GGTNACC 1 cut(s) 32
EcoRII CCWGG 3 cut(s) 36, 267, 701
EcoRV GATATC 1 cut(s) 1355
EcoT14I CCWWGG 2 cut(s) 14, 306
EcoT22I ATGCAT 1 cut(s) 1720
EcoT38I GRGCYC 1 cut(s) 303
EgeI GGCGCC 1 cut(s) 121
EheI GGCGCC 1 cut(s) 121
ErhI CCWWGG 2 cut(s) 14, 306
FaeI CATG 8 cut(s) 178, 310, 404, 469, 1036, 1490, 1549, 1762
FaqI GGGAC 3 cut(s) 187, 1233, 1397
FatI CATG 8 cut(s) 174, 306, 400, 465, 1032, 1486, 1545, 1758
FauI CCCGC 2 cut(s) 118, 1772
FauNDI CATATG 1 cut(s) 1398
Fnu4HI GCNGC 5 cut(s) 114, 342, 1656, 1670, 1696
FokI GGATG 3 cut(s) 647, 665, 1432
FriOI GRGCYC 1 cut(s) 303
Fsp4HI GCNGC 5 cut(s) 114, 342, 1656, 1670, 1696
FspBI CTAG 3 cut(s) 870, 1304, 1364
FspI TGCGCA 1 cut(s) 1485
GlaI GCGC 5 cut(s) 121, 1476, 1485, 1539, 1598
GluI GCNGC 5 cut(s) 114, 342, 1656, 1670, 1696
GsuI CTGGAG 1 cut(s) 341
HaeII RGCGCY 1 cut(s) 123
HaeIII GGCC 3 cut(s) 287, 557, 1463
HapII CCGG 6 cut(s) 130, 334, 380, 810, 899, 1020
HgaI GACGC 1 cut(s) 361
HhaI GCGC 5 cut(s) 122, 1477, 1486, 1540, 1599
Hin1I GRCGYC 1 cut(s) 120
Hin1II CATG 8 cut(s) 178, 310, 404, 469, 1036, 1490, 1549, 1762
Hin6I GCGC 5 cut(s) 120, 1475, 1484, 1538, 1597
HinP1I GCGC 5 cut(s) 120, 1475, 1484, 1538, 1597
HinfI GANTC 4 cut(s) 212, 749, 953, 1501
HpaII CCGG 6 cut(s) 130, 334, 380, 810, 899, 1020
HphI GGTGA 4 cut(s) 490, 786, 977, 1193
Hpy166II GTNNAC 2 cut(s) 1201, 1238
Hpy188I TCNGA 7 cut(s) 217, 253, 746, 816, 850, 1161, 1428
Hpy188III TCNNGA 6 cut(s) 223, 244, 296, 361, 1505, 1640
Hpy8I GTNNAC 2 cut(s) 1201, 1238
Hpy99I CGWCG 2 cut(s) 350, 377
HpyAV CCTTC 8 cut(s) 87, 166, 433, 875, 901, 1214, 1290, 1489
HpyCH4III ACNGT 8 cut(s) 142, 187, 709, 770, 805, 1060, 1242, 1288
HpyCH4IV ACGT 1 cut(s) 674
HpyF3I CTNAG 5 cut(s) 837, 849, 945, 1043, 1427
HpySE526I ACGT 1 cut(s) 674
Hsp92I GRCGYC 1 cut(s) 120
Hsp92II CATG 8 cut(s) 178, 310, 404, 469, 1036, 1490, 1549, 1762
HspAI GCGC 5 cut(s) 120, 1475, 1484, 1538, 1597
KasI GGCGCC 1 cut(s) 119
KroI GCCGGC 1 cut(s) 379
KroNI GCCGGC 1 cut(s) 381
Kzo9I GATC 3 cut(s) 219, 240, 1636
LguI GCTCTTC 1 cut(s) 69
LmnI GCTCC 5 cut(s) 50, 325, 550, 788, 1010
Lsp1109I GCAGC 2 cut(s) 1656, 1667
LweI GCATC 3 cut(s) 652, 1462, 1714
MabI ACCWGGT 2 cut(s) 36, 267
MaeI CTAG 3 cut(s) 870, 1304, 1364
MaeII ACGT 1 cut(s) 674
MaeIII GTNAC 3 cut(s) 32, 1401, 1591
MalI GATC 3 cut(s) 221, 242, 1638
MbiI CCGCTC 2 cut(s) 986, 1053
MboI GATC 3 cut(s) 219, 240, 1636
MboII GAAGA 6 cut(s) 37, 56, 94, 284, 1601, 1763
MflI RGATCY 2 cut(s) 219, 240
MhlI GDGCHC 4 cut(s) 264, 303, 1189, 1240
MlsI TGGCCA 1 cut(s) 1463
MluNI TGGCCA 1 cut(s) 1463
Mly113I GGCGCC 1 cut(s) 120
MlyI GAGTC 3 cut(s) 206, 743, 1495
MmeI TCCRAC 1 cut(s) 528
Mox20I TGGCCA 1 cut(s) 1463
Mph1103I ATGCAT 1 cut(s) 1720
MroNI GCCGGC 1 cut(s) 379
MscI TGGCCA 1 cut(s) 1463
MseI TTAA 6 cut(s) 420, 857, 939, 1145, 1179, 1262
MslI CAYNNNNRTG 2 cut(s) 405, 434
Msp20I TGGCCA 1 cut(s) 1463
MspA1I CMGCKG 2 cut(s) 116, 278
MspI CCGG 6 cut(s) 130, 334, 380, 810, 899, 1020
MspR9I CCNGG 7 cut(s) 38, 130, 269, 335, 703, 1020, 1021
Mva1269I GAATGC 3 cut(s) 147, 508, 889
MvaI CCWGG 3 cut(s) 38, 269, 703
MvnI CGCG 1 cut(s) 1597
NaeI GCCGGC 1 cut(s) 381
NarI GGCGCC 1 cut(s) 120
NciI CCSGG 4 cut(s) 130, 335, 1020, 1021
NcoI CCATGG 1 cut(s) 306
NdeI CATATG 1 cut(s) 1398
NdeII GATC 3 cut(s) 219, 240, 1636
NgoMIV GCCGGC 1 cut(s) 379
NlaIII CATG 8 cut(s) 178, 310, 404, 469, 1036, 1490, 1549, 1762
NlaIV GGNNCC 5 cut(s) 121, 286, 668, 897, 1249
NsbI TGCGCA 1 cut(s) 1485
NsiI ATGCAT 1 cut(s) 1720
NspI RCATGY 1 cut(s) 404
NspV TTCGAA 1 cut(s) 80
PaeR7I CTCGAG 1 cut(s) 296
PciSI GCTCTTC 1 cut(s) 69
PcsI WCGNNNNNNNCGW 1 cut(s) 345
PctI GAATGC 3 cut(s) 147, 508, 889
PdiI GCCGGC 1 cut(s) 381
PfeI GAWTC 1 cut(s) 953
PkrI GCNGC 5 cut(s) 115, 343, 1657, 1671, 1697
PleI GAGTC 3 cut(s) 206, 743, 1495
PluTI GGCGCC 1 cut(s) 123
PpsI GAGTC 3 cut(s) 206, 743, 1495
PsiI TTATAA 1 cut(s) 1328
Psp124BI GAGCTC 1 cut(s) 303
Psp6I CCWGG 3 cut(s) 36, 267, 701
PspEI GGTNACC 1 cut(s) 32
PspGI CCWGG 3 cut(s) 36, 267, 701
PspN4I GGNNCC 5 cut(s) 121, 286, 668, 897, 1249
PspPI GGNCC 4 cut(s) 285, 766, 896, 1247
PstI CTGCAG 1 cut(s) 390
PsuI RGATCY 2 cut(s) 219, 240
RsaI GTAC 3 cut(s) 521, 715, 1057
RsaNI GTAC 3 cut(s) 520, 714, 1056
RseI CAYNNNNRTG 2 cut(s) 405, 434
SacI GAGCTC 1 cut(s) 303
SapI GCTCTTC 1 cut(s) 69
SaqAI TTAA 6 cut(s) 420, 857, 939, 1145, 1179, 1262
SatI GCNGC 5 cut(s) 114, 342, 1656, 1670, 1696
Sau3AI GATC 3 cut(s) 219, 240, 1636
Sau96I GGNCC 4 cut(s) 285, 766, 896, 1247
SchI GAGTC 3 cut(s) 206, 743, 1495
ScrFI CCNGG 7 cut(s) 38, 130, 269, 335, 703, 1020, 1021
SduI GDGCHC 4 cut(s) 264, 303, 1189, 1240
SexAI ACCWGGT 2 cut(s) 36, 267
SfaNI GCATC 3 cut(s) 652, 1462, 1714
SfcI CTRYAG 2 cut(s) 386, 1616
SfoI GGCGCC 1 cut(s) 121
Sfr274I CTCGAG 1 cut(s) 296
SfuI TTCGAA 1 cut(s) 80
SinI GGWCC 3 cut(s) 766, 896, 1247
SlaI CTCGAG 1 cut(s) 296
SmaI CCCGGG 1 cut(s) 1021
SmiMI CAYNNNNRTG 2 cut(s) 405, 434
SmlI CTYRAG 4 cut(s) 53, 296, 647, 1439
SmoI CTYRAG 4 cut(s) 53, 296, 647, 1439
SspDI GGCGCC 1 cut(s) 119
SspMI CTAG 3 cut(s) 870, 1304, 1364
SstI GAGCTC 1 cut(s) 303
StyD4I CCNGG 7 cut(s) 36, 128, 267, 333, 701, 1018, 1019
StyI CCWWGG 2 cut(s) 14, 306
TaaI ACNGT 8 cut(s) 142, 187, 709, 770, 805, 1060, 1242, 1288
TaiI ACGT 1 cut(s) 677
TatI WGTACW 2 cut(s) 519, 713
TauI GCSGC 3 cut(s) 116, 344, 1698
TfiI GAWTC 1 cut(s) 953
Tru1I TTAA 6 cut(s) 420, 857, 939, 1145, 1179, 1262
Tru9I TTAA 6 cut(s) 420, 857, 939, 1145, 1179, 1262
TscAI CASTG 1 cut(s) 1132
TseI GCWGC 2 cut(s) 1655, 1669
TspDTI ATGAA 2 cut(s) 1021, 1776
TspGWI ACGGA 2 cut(s) 224, 993
TspMI CCCGGG 1 cut(s) 1019
TspRI CASTG 1 cut(s) 1132
VneI GTGCAC 1 cut(s) 1236
VpaK11BI GGWCC 3 cut(s) 766, 896, 1247
XapI RAATTY 3 cut(s) 566, 968, 1113
XceI RCATGY 1 cut(s) 404
XhoI CTCGAG 1 cut(s) 296
XmaI CCCGGG 1 cut(s) 1019
XspI CTAG 3 cut(s) 870, 1304, 1364
Zsp2I ATGCAT 1 cut(s) 1720
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.