AT3G29310

BAG family molecular chaperone regulator 8, chloroplastic-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
OG0013047
Physical Location & Seq
Forward (+)
11249558 .. 11251821
2264 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G29310.1

Sequence Viewer

Length: 1656 bp
ATGGCTTCTCACCACCACCACAACCATAACCACGTGTGCTCACGCCACCAAAACCACCACAATAACACCCCTCAATTCGCCACGTCACCAAACTGCTGCAACAAATCCAACCACCCTTCTCCGCCGCCAGCGGAGGATAATCTTCTCCATCTCGTCGCTACTTACCTCCAAAATCATCAACAAGAAACTCAATGCTCCTGCGAGACTTCTTGTCAAAACTTCAATGTTATTAGAAGTCAGAACCGTGTTTTGCGTCAGCATAAGAATGTTCCACGAGAATACGACCAAGTTGTTCTGTCTTGTCTTCTCCGCAAAATCGATGATCTTGAATCTTCACTCAACAAGTTTTCATCTTTCTATGACAAACGTCGAGATCGACACTCAACACTAAGAGATTCGGCGGCGCGTGTTATTCAAACCCATTTCCGCTCTTACCTTGTTCACAGATCCATATCCTTTAGACAACTCAAGGAGCTTGCAATGATAAAAGCTAGCTTCTTGTCTCTTAAATCTTCGGTTTCGGGGAAACTCATTTTCCCTTTCAAAGTTGTTTCTCGGAAAGCTACAGACTTGCTTCTTCAACTGGATTCAATTCAGGGTAGGATTGATCCAATGATAAGAAGTAGTAAGAGATCATTGAGCAGAGATTTGGTGAGGTTTGTGCAATATGTTGATGATTGTGTTGTTAAAAGGTATGGTTTTGTTGTTAAGTCTGGTAGTGGCATCAAACTTAATGGCAAAAAGCCTCAGGGTTTTGGTACTTCTAGTGAGGATGAAGATAACAATGCAGACATGAGTGATGATAGTGAAGAAGTTCCAGTGAGTTCTATTGATAAGAGAAAGGTTGCTAGTTCTAAGTCTAGAACCGGGGTTGTGATAGAAGGTGATGTAGTGAAGCCTCCGGTTATGAAATTTGTTGTATTGGACAAGAACAGGAATGTGTGTCAGGTATATGGAAATAGGCATGATCTAACTTCGAGTGCAGAGGATGATTCAGTTGATGGTGACGAGGAAACCCTTGTGATGTCCAGGGATAATGGAAGGAAGCAGAGTTTGAAAGCTAGGAACGGGGTTTCGGTGAAAGGAGGTGGAGGGAAGACAACTCGGGTGGTGAAAACTGTGAGTTTTGATGAGAATGGGAATGTATGTAAGGTTTATGGAGATACACATGACCTAACTTCTAGTGCAGAGGATGATGATTCAGTTGACGTTGGAGAGGAAACCCTCGTGATGTGTAGGGATGAGGGAAAGAGGCGTAGTTCGAAAACTGGGAGCAGGGTTTTGGTGAAAGGAAGTGGAGGAAAAACAAACCGTGTGGTGAAAACTGTGAGCTTTGACGAGAATGGGAACGTCTATAAGGCTTATGGAGATACGCCAGAGTCAAGTATTATAAGTGAGGAAGATGACTCGACAAGCGGATCAAATGAAGGAAATGGAGAAGAGAAAGGGAATGTGAATGAGGTTGAGGAAATCAAATACGTTCCCAAGGAAAACGAGAGCTTTGAAGAAGAAGAAGAAAAAGAAACTGATTCTGAAAATGAAGTTTCTTCTTCAGAGGGCAGTGAAGGGGACAAAAGAGTTACTAAAAAGGAGGTCCAGCATCAAAAAGGAAGCTTAATGTTCTCTCCTCCATTGCCACTAAAAATGGAGCCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006457 GO:0008150 GO:0009266 GO:0009506 GO:0009605 GO:0009607 GO:0009628 GO:0009987 GO:0016020 GO:0030054 GO:0043207 GO:0044464 GO:0050896 GO:0055044 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
BAG

Protein Analysis

551

Amino Acids

61.5

Weight (kDa)

6.46

Isoelectric Point (pI)

53.21

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0013047)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G29310
fragaria_vesca FvH4_6g47270
malus_domestica MD00G1156300.v1.1 MD09G1062500.v1.1
prunus_persica Prupe.3G257800_v2.0.a1
pyrus_communis pycom111g05280 pycom17g05630
rosa_chinensis RchiOBHm_Chr2g0166341
rosa_laevigata RLG00000021611
rosa_multiflora Rmu_co8270777.1_g000001 Rmu_sc0030614.1_g000002
rosa_roxburghii Rroxscaffold_2G00084970
rosa_rugosa Rorug02G0522200
rosa_samantha Rh2AG588300 Rh2BG600300 Rh2CG571200 Rh2DG610500
rosa_wichuraiana Rw2G049030

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1391
AccBSI CCGCTC 1 cut(s) 429
AccII CGCG 1 cut(s) 406
AciI CCGC 7 cut(s) 122, 125, 131, 310, 401, 427, 1416
AclWI GGATC 3 cut(s) 441, 602, 1426
AcsI RAATTY 1 cut(s) 911
AcuI CTGAAG 1 cut(s) 1536
AcvI CACGTG 1 cut(s) 34
AfaI GTAC 1 cut(s) 760
AflIII ACRYGT 1 cut(s) 33
AgsI TTSAA 8 cut(s) 223, 329, 416, 544, 581, 591, 1057, 1505
AhdI GACNNNNNGTC 1 cut(s) 210
AjiI CACGTC 1 cut(s) 84
AjnI CCWGG 1 cut(s) 1028
AluBI AGCT 8 cut(s) 475, 491, 495, 563, 1061, 1332, 1500, 1614
AluI AGCT 8 cut(s) 475, 491, 495, 563, 1061, 1332, 1500, 1614
Alw21I GWGCWC 1 cut(s) 41
Alw26I GTCTC 2 cut(s) 197, 507
AlwI GGATC 3 cut(s) 441, 602, 1426
Ama87I CYCGRG 1 cut(s) 1104
ApeKI GCWGC 1 cut(s) 96
ApoI RAATTY 1 cut(s) 911
Asp700I GAANNNNTTC 1 cut(s) 813
AspLEI GCGC 1 cut(s) 406
AspS9I GGNCC 1 cut(s) 1594
AsuC2I CCSGG 1 cut(s) 868
AsuHPI GGTGA 8 cut(s) 78, 664, 896, 1016, 1090, 1123, 1297, 1330
AsuII TTCGAA 1 cut(s) 1262
AsuNHI GCTAGC 1 cut(s) 491
AvaI CYCGRG 1 cut(s) 1104
AvaII GGWCC 1 cut(s) 1594
AxyI CCTNAGG 1 cut(s) 747
BauI CACGAG 2 cut(s) 273, 1226
BbrPI CACGTG 1 cut(s) 34
BbsI GAAGAC 2 cut(s) 296, 1103
Bbv12I GWGCWC 1 cut(s) 41
BbvI GCAGC 1 cut(s) 83
BccI CCATC 2 cut(s) 156, 995
BciT130I CCWGG 1 cut(s) 1030
BcnI CCSGG 1 cut(s) 868
BcoDI GTCTC 2 cut(s) 197, 507
BfaI CTAG 6 cut(s) 492, 765, 849, 861, 1062, 1182
BfmI CTRYAG 1 cut(s) 564
BisI GCNGC 3 cut(s) 97, 125, 402
BlsI GCNGC 3 cut(s) 98, 126, 403
Bme1390I CCNGG 2 cut(s) 868, 1030
Bme18I GGWCC 1 cut(s) 1594
BmeRI GACNNNNNGTC 1 cut(s) 210
BmeT110I CYCGRG 1 cut(s) 1104
BmgBI CACGTC 1 cut(s) 84
BmgT120I GGNCC 1 cut(s) 1594
BmiI GGNNCC 1 cut(s) 1650
BmrFI CCNGG 2 cut(s) 868, 1030
BmrI ACTGGG 1 cut(s) 1278
BmsI GCATC 2 cut(s) 732, 1609
BmtI GCTAGC 1 cut(s) 495
BmuI ACTGGG 1 cut(s) 1278
BoxI GACNNNNGTC 1 cut(s) 366
BpiI GAAGAC 2 cut(s) 296, 1103
Bpu14I TTCGAA 1 cut(s) 1262
BpuEI CTTGAG 1 cut(s) 452
BpuMI CCSGG 1 cut(s) 868
Bsa29I ATCGAT 1 cut(s) 318
BsaAI YACGTR 1 cut(s) 34
BsaBI GATNNNNATC 1 cut(s) 451
BsaJI CCNNGG 3 cut(s) 867, 1029, 1485
BsaWI WCCGGW 1 cut(s) 901
Bse1I ACTGG 3 cut(s) 588, 818, 1273
Bse21I CCTNAGG 1 cut(s) 747
Bse3DI GCAATG 2 cut(s) 486, 1631
Bse8I GATNNNNATC 1 cut(s) 451
BseBI CCWGG 1 cut(s) 1030
BseCI ATCGAT 1 cut(s) 318
BseDI CCNNGG 3 cut(s) 867, 1029, 1485
BseGI GGATG 4 cut(s) 778, 994, 1198, 1246
BseJI GATNNNNATC 1 cut(s) 451
BseMI GCAATG 2 cut(s) 486, 1631
BseMII CTCAG 1 cut(s) 761
BseNI ACTGG 3 cut(s) 588, 818, 1273
BseRI GAGGAG 1 cut(s) 1617
BseXI GCAGC 1 cut(s) 83
BsgI GTGCAG 2 cut(s) 1002, 1206
Bsh1236I CGCG 1 cut(s) 406
BshVI ATCGAT 1 cut(s) 318
BsiHKAI GWGCWC 1 cut(s) 41
BsiHKCI CYCGRG 1 cut(s) 1104
BsiSI CCGG 2 cut(s) 867, 902
BslFI GGGAC 1 cut(s) 1583
BsmAI GTCTC 2 cut(s) 197, 507
BsmFI GGGAC 1 cut(s) 1583
BsoBI CYCGRG 1 cut(s) 1104
Bsp119I TTCGAA 1 cut(s) 1262
Bsp1286I GDGCHC 1 cut(s) 41
Bsp143I GATC 7 cut(s) 322, 373, 446, 607, 632, 967, 1418
BspACI CCGC 7 cut(s) 122, 125, 131, 310, 401, 427, 1416
BspCNI CTCAG 1 cut(s) 760
BspDI ATCGAT 1 cut(s) 318
BspFNI CGCG 1 cut(s) 406
BspLI GGNNCC 1 cut(s) 1650
BspOI GCTAGC 1 cut(s) 495
BspPI GGATC 3 cut(s) 441, 602, 1426
BspT104I TTCGAA 1 cut(s) 1262
BsrBI CCGCTC 1 cut(s) 429
BsrDI GCAATG 2 cut(s) 486, 1631
BsrI ACTGG 3 cut(s) 588, 818, 1273
BssECI CCNNGG 3 cut(s) 867, 1029, 1485
BssMI GATC 7 cut(s) 322, 373, 446, 607, 632, 967, 1418
BssSI CACGAG 2 cut(s) 273, 1226
BssT1I CCWWGG 1 cut(s) 1485
Bst2BI CACGAG 2 cut(s) 273, 1226
Bst2UI CCWGG 1 cut(s) 1030
Bst4CI ACNGT 4 cut(s) 245, 1120, 1313, 1327
Bst6I CTCTTC 1 cut(s) 1434
BstBAI YACGTR 1 cut(s) 34
BstBI TTCGAA 1 cut(s) 1262
BstC8I GCNNGC 3 cut(s) 129, 477, 493
BstDEI CTNAG 3 cut(s) 389, 747, 855
BstF5I GGATG 4 cut(s) 778, 994, 1198, 1246
BstFNI CGCG 1 cut(s) 406
BstHHI GCGC 1 cut(s) 406
BstKTI GATC 7 cut(s) 325, 376, 449, 610, 635, 970, 1421
BstMAI GTCTC 2 cut(s) 197, 507
BstMBI GATC 7 cut(s) 322, 373, 446, 607, 632, 967, 1418
BstNI CCWGG 1 cut(s) 1030
BstPAI GACNNNNGTC 1 cut(s) 366
BstSCI CCNGG 2 cut(s) 866, 1028
BstSFI CTRYAG 1 cut(s) 564
BstUI CGCG 1 cut(s) 406
BstV1I GCAGC 1 cut(s) 83
BstV2I GAAGAC 2 cut(s) 296, 1103
BstX2I RGATCY 1 cut(s) 446
BstYI RGATCY 1 cut(s) 446
Bsu15I ATCGAT 1 cut(s) 318
Bsu36I CCTNAGG 1 cut(s) 747
BsuTUI ATCGAT 1 cut(s) 318
BtrI CACGTC 1 cut(s) 84
BtsCI GGATG 4 cut(s) 778, 994, 1198, 1246
BtsI GCAGTG 1 cut(s) 1567
BtsIMutI CAGTG 2 cut(s) 825, 1567
Cac8I GCNNGC 3 cut(s) 129, 477, 493
CfoI GCGC 1 cut(s) 406
Cfr13I GGNCC 1 cut(s) 1594
ClaI ATCGAT 1 cut(s) 318
CseI GACGC 1 cut(s) 242
Csp6I GTAC 1 cut(s) 759
CspCI CAANNNNNGTGG 4 cut(s) 1089, 1124, 1296, 1331
CviAII CATG 3 cut(s) 793, 965, 1169
CviQI GTAC 1 cut(s) 759
DdeI CTNAG 3 cut(s) 389, 747, 855
DpnI GATC 7 cut(s) 324, 375, 448, 609, 634, 969, 1420
DpnII GATC 7 cut(s) 322, 373, 446, 607, 632, 967, 1418
DriI GACNNNNNGTC 1 cut(s) 210
Eam1104I CTCTTC 1 cut(s) 1434
Eam1105I GACNNNNNGTC 1 cut(s) 210
EarI CTCTTC 1 cut(s) 1434
EciI GGCGGA 1 cut(s) 111
Eco130I CCWWGG 1 cut(s) 1485
Eco47I GGWCC 1 cut(s) 1594
Eco57I CTGAAG 1 cut(s) 1536
Eco72I CACGTG 1 cut(s) 34
Eco81I CCTNAGG 1 cut(s) 747
Eco88I CYCGRG 1 cut(s) 1104
EcoRII CCWGG 1 cut(s) 1028
EcoT14I CCWWGG 1 cut(s) 1485
ErhI CCWWGG 1 cut(s) 1485
FaeI CATG 3 cut(s) 796, 968, 1172
FaqI GGGAC 1 cut(s) 1583
FatI CATG 3 cut(s) 792, 964, 1168
Fnu4HI GCNGC 3 cut(s) 97, 125, 402
FokI GGATG 4 cut(s) 785, 1001, 1205, 1253
Fsp4HI GCNGC 3 cut(s) 97, 125, 402
FspBI CTAG 6 cut(s) 492, 765, 849, 861, 1062, 1182
GlaI GCGC 1 cut(s) 405
GluI GCNGC 3 cut(s) 97, 125, 402
HapII CCGG 2 cut(s) 867, 902
HgaI GACGC 1 cut(s) 242
HhaI GCGC 1 cut(s) 406
Hin1II CATG 3 cut(s) 796, 968, 1172
Hin6I GCGC 1 cut(s) 404
HinP1I GCGC 1 cut(s) 404
HincII GTYRAC 1 cut(s) 1207
HindII GTYRAC 1 cut(s) 1207
HindIII AAGCTT 1 cut(s) 1612
HinfI GANTC 8 cut(s) 329, 395, 587, 992, 1199, 1379, 1406, 1529
HpaII CCGG 2 cut(s) 867, 902
HphI GGTGA 8 cut(s) 78, 664, 896, 1016, 1090, 1123, 1297, 1330
Hpy166II GTNNAC 2 cut(s) 442, 1207
Hpy188I TCNGA 4 cut(s) 240, 558, 1534, 1555
Hpy188III TCNNGA 4 cut(s) 326, 371, 861, 1228
Hpy8I GTNNAC 2 cut(s) 442, 1207
Hpy99I CGWCG 2 cut(s) 158, 372
HpyAV CCTTC 5 cut(s) 126, 875, 1035, 1421, 1559
HpyCH4III ACNGT 4 cut(s) 245, 1120, 1313, 1327
HpyCH4IV ACGT 6 cut(s) 33, 83, 367, 1209, 1350, 1479
HpyCH4V TGCA 6 cut(s) 99, 479, 664, 788, 983, 1187
HpyF3I CTNAG 3 cut(s) 389, 747, 855
HpySE526I ACGT 6 cut(s) 33, 83, 367, 1209, 1350, 1479
Hsp92II CATG 3 cut(s) 796, 968, 1172
HspAI GCGC 1 cut(s) 404
Kzo9I GATC 7 cut(s) 322, 373, 446, 607, 632, 967, 1418
LmnI GCTCC 4 cut(s) 200, 472, 1272, 1648
Lsp1109I GCAGC 1 cut(s) 83
LweI GCATC 2 cut(s) 732, 1609
MaeI CTAG 6 cut(s) 492, 765, 849, 861, 1062, 1182
MaeII ACGT 6 cut(s) 33, 83, 367, 1209, 1350, 1479
MaeIII GTNAC 3 cut(s) 84, 1004, 1579
MalI GATC 7 cut(s) 324, 375, 448, 609, 634, 969, 1420
MbiI CCGCTC 1 cut(s) 429
MboI GATC 7 cut(s) 322, 373, 446, 607, 632, 967, 1418
MflI RGATCY 1 cut(s) 446
MhlI GDGCHC 1 cut(s) 41
MluCI AATT 3 cut(s) 74, 591, 911
MlyI GAGTC 2 cut(s) 1388, 1400
MmeI TCCRAC 2 cut(s) 132, 1192
MroXI GAANNNNTTC 1 cut(s) 813
MseI TTAA 5 cut(s) 507, 687, 708, 732, 1616
MslI CAYNNNNRTG 1 cut(s) 264
MspA1I CMGCKG 1 cut(s) 131
MspI CCGG 2 cut(s) 867, 902
MspR9I CCNGG 2 cut(s) 868, 1030
MvaI CCWGG 1 cut(s) 1030
MvnI CGCG 1 cut(s) 406
NciI CCSGG 1 cut(s) 868
NdeII GATC 7 cut(s) 322, 373, 446, 607, 632, 967, 1418
NheI GCTAGC 1 cut(s) 491
NlaIII CATG 3 cut(s) 796, 968, 1172
NlaIV GGNNCC 1 cut(s) 1650
NmuCI GTSAC 2 cut(s) 84, 1004
NspV TTCGAA 1 cut(s) 1262
PcsI WCGNNNNNNNCGW 1 cut(s) 373
PdmI GAANNNNTTC 1 cut(s) 813
PfeI GAWTC 6 cut(s) 329, 395, 587, 992, 1199, 1529
PkrI GCNGC 3 cut(s) 98, 126, 403
PleI GAGTC 2 cut(s) 1387, 1400
PmaCI CACGTG 1 cut(s) 34
PmlI CACGTG 1 cut(s) 34
PpsI GAGTC 2 cut(s) 1387, 1400
Ppu21I YACGTR 1 cut(s) 34
PshAI GACNNNNGTC 1 cut(s) 366
PsiI TTATAA 1 cut(s) 1391
Psp6I CCWGG 1 cut(s) 1028
PspCI CACGTG 1 cut(s) 34
PspGI CCWGG 1 cut(s) 1028
PspN4I GGNNCC 1 cut(s) 1650
PspPI GGNCC 1 cut(s) 1594
PsuI RGATCY 1 cut(s) 446
RsaI GTAC 1 cut(s) 760
RsaNI GTAC 1 cut(s) 759
RseI CAYNNNNRTG 1 cut(s) 264
SaqAI TTAA 5 cut(s) 507, 687, 708, 732, 1616
SatI GCNGC 3 cut(s) 97, 125, 402
Sau3AI GATC 7 cut(s) 322, 373, 446, 607, 632, 967, 1418
Sau96I GGNCC 1 cut(s) 1594
SchI GAGTC 2 cut(s) 1388, 1400
ScrFI CCNGG 2 cut(s) 868, 1030
SduI GDGCHC 1 cut(s) 41
SfaNI GCATC 2 cut(s) 732, 1609
SfcI CTRYAG 1 cut(s) 564
SfuI TTCGAA 1 cut(s) 1262
SinI GGWCC 1 cut(s) 1594
SmiMI CAYNNNNRTG 1 cut(s) 264
SmlI CTYRAG 1 cut(s) 467
SmoI CTYRAG 1 cut(s) 467
Sse9I AATT 3 cut(s) 74, 591, 911
SsiI CCGC 7 cut(s) 122, 125, 131, 310, 401, 427, 1416
SspMI CTAG 6 cut(s) 492, 765, 849, 861, 1062, 1182
StyD4I CCNGG 2 cut(s) 866, 1028
StyI CCWWGG 1 cut(s) 1485
TaaI ACNGT 4 cut(s) 245, 1120, 1313, 1327
TaiI ACGT 6 cut(s) 36, 86, 370, 1212, 1353, 1482
TaqI TCGA 6 cut(s) 318, 370, 376, 977, 1262, 1409
TasI AATT 3 cut(s) 74, 591, 911
TauI GCSGC 2 cut(s) 127, 404
TfiI GAWTC 6 cut(s) 329, 395, 587, 992, 1199, 1529
Tru1I TTAA 5 cut(s) 507, 687, 708, 732, 1616
Tru9I TTAA 5 cut(s) 507, 687, 708, 732, 1616
TscAI CASTG 2 cut(s) 825, 1567
TseFI GTSAC 2 cut(s) 84, 1004
TseI GCWGC 1 cut(s) 96
Tsp45I GTSAC 2 cut(s) 84, 1004
TspDTI ATGAA 5 cut(s) 339, 789, 923, 1440, 1554
TspRI CASTG 2 cut(s) 825, 1567
VpaK11BI GGWCC 1 cut(s) 1594
XapI RAATTY 1 cut(s) 911
XbaI TCTAGA 1 cut(s) 860
XmnI GAANNNNTTC 1 cut(s) 813
XspI CTAG 6 cut(s) 492, 765, 849, 861, 1062, 1182
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.