Rmu_co8270777.1_g000001

BAG family molecular chaperone regulator 8

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8270777.1
OG0013047
Physical Location & Seq
Reverse (-)
2 .. 827
826 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8270777.1_g000001.1.cds

Sequence Viewer

Length: 725 bp
tcccccagatccctacctccatccccaccaaaaccctcacaaaacccacaaatcccaacacccaaaacaccgtttccacattcaagaacagcaagaacaacaacttcactctcttctttccagaatcgaagccctagaagcttctctacaccaccactctaccaatcgcgctcggtcttcggattcttactctctcagagactatgctgctcgggttattcagacccatttccgggccttccttgttcgccgatcaaggactctcaggcagctcaaagacctcgcctttatcaagtcctctttcgcctctctcaagtcttcggtttcgaaccagacccacgtcgattttcactccgtttctcagaaagcactcgctttgcttaccaagctcgactctattcagtgtggtgattcgattgttagagatgggaagaggtctataagtagaaatttagttcagttcttagagtttatcgaaggggttgttgtgaaaaggcaggcgatttgcttgaaaccagtgaagaatgtgaggtctgttcaaaatgtgaacaagtctaggggtttgggtaacaaatgtggaggtttggggagggatcagagggagatgattgggaaattgagggagaggattgagaagattcgtgggtttgctagagtttcggagaatgatgaggaggatgtggagttggaagggtttcaacatgtcagtgatgatgatgatgatg
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006457 GO:0008150 GO:0009266 GO:0009506 GO:0009605 GO:0009607 GO:0009628 GO:0009987 GO:0016020 GO:0030054 GO:0043207 GO:0044464 GO:0050896 GO:0055044 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
BAG

Protein Analysis

241

Amino Acids

27.65

Weight (kDa)

9.62

Isoelectric Point (pI)

50.56

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013047)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G29310
fragaria_vesca FvH4_6g47270
malus_domestica MD00G1156300.v1.1 MD09G1062500.v1.1
prunus_persica Prupe.3G257800_v2.0.a1
pyrus_communis pycom111g05280 pycom17g05630
rosa_chinensis RchiOBHm_Chr2g0166341
rosa_laevigata RLG00000021611
rosa_multiflora Rmu_co8270777.1_g000001 Rmu_sc0030614.1_g000002
rosa_roxburghii Rroxscaffold_2G00084970
rosa_rugosa Rorug02G0522200
rosa_samantha Rh2AG588300 Rh2BG600300 Rh2CG571200 Rh2DG610500
rosa_wichuraiana Rw2G049030

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 169
AclWI GGATC 2 cut(s) 3, 601
AcsI RAATTY 1 cut(s) 449
AfiI CCNNNNNNNGG 2 cut(s) 232, 233
AflIII ACRYGT 1 cut(s) 701
AgsI TTSAA 4 cut(s) 84, 512, 540, 699
AjiI CACGTC 1 cut(s) 341
AluBI AGCT 3 cut(s) 141, 272, 389
AluI AGCT 3 cut(s) 141, 272, 389
Alw26I GTCTC 1 cut(s) 193
AlwI GGATC 2 cut(s) 3, 601
Ama87I CYCGRG 1 cut(s) 211
AoxI GGCC 1 cut(s) 235
ApeKI GCWGC 2 cut(s) 207, 269
ApoI RAATTY 1 cut(s) 449
Asp700I GAANNNNTTC 1 cut(s) 694
AspLEI GCGC 1 cut(s) 171
AspS9I GGNCC 1 cut(s) 235
AsuC2I CCSGG 1 cut(s) 234
AsuHPI GGTGA 1 cut(s) 420
AsuII TTCGAA 1 cut(s) 327
AvaI CYCGRG 1 cut(s) 211
BarI GAAGNNNNNNTAC 2 cut(s) 130, 162
BbsI GAAGAC 2 cut(s) 169, 310
BbvI GCAGC 2 cut(s) 194, 281
BccI CCATC 2 cut(s) 28, 420
BcnI CCSGG 1 cut(s) 234
BcoDI GTCTC 1 cut(s) 193
BfaI CTAG 3 cut(s) 135, 556, 652
BisI GCNGC 2 cut(s) 208, 270
BlsI GCNGC 2 cut(s) 209, 271
Bme1390I CCNGG 1 cut(s) 234
BmeT110I CYCGRG 1 cut(s) 211
BmgBI CACGTC 1 cut(s) 341
BmgT120I GGNCC 1 cut(s) 235
BmrFI CCNGG 1 cut(s) 234
BoxI GACNNNNGTC 1 cut(s) 339
BpiI GAAGAC 2 cut(s) 169, 310
Bpu14I TTCGAA 1 cut(s) 327
BpuEI CTTGAG 1 cut(s) 297
BpuMI CCSGG 1 cut(s) 234
Bsc4I CCNNNNNNNGG 2 cut(s) 232, 233
Bse1I ACTGG 1 cut(s) 516
BseGI GGATG 2 cut(s) 20, 683
BseLI CCNNNNNNNGG 2 cut(s) 232, 233
BseMII CTCAG 3 cut(s) 209, 278, 375
BseNI ACTGG 1 cut(s) 516
BseRI GAGGAG 1 cut(s) 687
BseXI GCAGC 2 cut(s) 194, 281
Bsh1236I CGCG 1 cut(s) 169
BshFI GGCC 1 cut(s) 237
BsiHKCI CYCGRG 1 cut(s) 211
BsiSI CCGG 1 cut(s) 233
BslI CCNNNNNNNGG 2 cut(s) 232, 233
BsmAI GTCTC 1 cut(s) 193
BsnI GGCC 1 cut(s) 237
BsoBI CYCGRG 1 cut(s) 211
Bsp119I TTCGAA 1 cut(s) 327
Bsp143I GATC 3 cut(s) 8, 252, 593
BspANI GGCC 1 cut(s) 237
BspCNI CTCAG 3 cut(s) 208, 277, 374
BspFNI CGCG 1 cut(s) 169
BspPI GGATC 2 cut(s) 3, 601
BspT104I TTCGAA 1 cut(s) 327
BsrI ACTGG 1 cut(s) 516
BssMI GATC 3 cut(s) 8, 252, 593
Bst4CI ACNGT 1 cut(s) 72
Bst6I CTCTTC 2 cut(s) 118, 426
BstBI TTCGAA 1 cut(s) 327
BstC8I GCNNGC 1 cut(s) 499
BstDEI CTNAG 4 cut(s) 195, 264, 361, 464
BstF5I GGATG 2 cut(s) 20, 683
BstFNI CGCG 1 cut(s) 169
BstHHI GCGC 1 cut(s) 171
BstKTI GATC 3 cut(s) 11, 255, 596
BstMAI GTCTC 1 cut(s) 193
BstMBI GATC 3 cut(s) 8, 252, 593
BstMWI GCNNNNNNNGC 2 cut(s) 138, 386
BstNSI RCATGY 1 cut(s) 705
BstPAI GACNNNNGTC 1 cut(s) 339
BstSCI CCNGG 1 cut(s) 232
BstUI CGCG 1 cut(s) 169
BstV1I GCAGC 2 cut(s) 194, 281
BstV2I GAAGAC 2 cut(s) 169, 310
BstX2I RGATCY 1 cut(s) 8
BstYI RGATCY 1 cut(s) 8
BsuRI GGCC 1 cut(s) 237
BtrI CACGTC 1 cut(s) 341
BtsCI GGATG 2 cut(s) 20, 683
BtsIMutI CAGTG 3 cut(s) 408, 523, 713
Cac8I GCNNGC 1 cut(s) 499
CfoI GCGC 1 cut(s) 171
Cfr13I GGNCC 1 cut(s) 235
CviAII CATG 1 cut(s) 702
CviJI RGCY 5 cut(s) 132, 141, 237, 272, 389
CviKI_1 RGCY 5 cut(s) 132, 141, 237, 272, 389
DdeI CTNAG 4 cut(s) 195, 264, 361, 464
DpnI GATC 3 cut(s) 10, 254, 595
DpnII GATC 3 cut(s) 8, 252, 593
Eam1104I CTCTTC 2 cut(s) 118, 426
EarI CTCTTC 2 cut(s) 118, 426
Eco88I CYCGRG 1 cut(s) 211
FaeI CATG 1 cut(s) 705
FaiI YATR 3 cut(s) 205, 441, 703
FatI CATG 1 cut(s) 701
Fnu4HI GCNGC 2 cut(s) 208, 270
FokI GGATG 2 cut(s) 7, 690
Fsp4HI GCNGC 2 cut(s) 208, 270
FspBI CTAG 3 cut(s) 135, 556, 652
GlaI GCGC 1 cut(s) 170
GluI GCNGC 2 cut(s) 208, 270
HaeIII GGCC 1 cut(s) 237
HapII CCGG 1 cut(s) 233
HhaI GCGC 1 cut(s) 171
Hin1II CATG 1 cut(s) 705
Hin6I GCGC 1 cut(s) 169
HinP1I GCGC 1 cut(s) 169
HindIII AAGCTT 1 cut(s) 139
HinfI GANTC 6 cut(s) 124, 183, 260, 393, 411, 638
HpaII CCGG 1 cut(s) 233
HphI GGTGA 1 cut(s) 420
Hpy166II GTNNAC 1 cut(s) 548
Hpy188I TCNGA 6 cut(s) 182, 198, 223, 364, 598, 662
Hpy188III TCNNGA 2 cut(s) 84, 121
Hpy8I GTNNAC 1 cut(s) 548
Hpy99I CGWCG 1 cut(s) 345
HpyAV CCTTC 3 cut(s) 248, 471, 684
HpyCH4III ACNGT 1 cut(s) 72
HpyCH4IV ACGT 1 cut(s) 340
HpyF10VI GCNNNNNNNGC 2 cut(s) 138, 386
HpyF3I CTNAG 4 cut(s) 195, 264, 361, 464
HpySE526I ACGT 1 cut(s) 340
Hsp92II CATG 1 cut(s) 705
HspAI GCGC 1 cut(s) 169
Kzo9I GATC 3 cut(s) 8, 252, 593
LpnPI CCDG 7 cut(s) 19, 134, 246, 251, 345, 483, 529
Lsp1109I GCAGC 2 cut(s) 194, 281
MaeI CTAG 3 cut(s) 135, 556, 652
MaeII ACGT 1 cut(s) 340
MaeIII GTNAC 1 cut(s) 567
MalI GATC 3 cut(s) 10, 254, 595
MboI GATC 3 cut(s) 8, 252, 593
MboII GAAGA 6 cut(s) 105, 169, 310, 443, 533, 647
MflI RGATCY 1 cut(s) 8
MluCI AATT 2 cut(s) 449, 615
MlyI GAGTC 2 cut(s) 254, 387
MmeI TCCRAC 1 cut(s) 667
MroXI GAANNNNTTC 1 cut(s) 694
MslI CAYNNNNRTG 1 cut(s) 706
MspI CCGG 1 cut(s) 233
MspR9I CCNGG 1 cut(s) 234
MvnI CGCG 1 cut(s) 169
MwoI GCNNNNNNNGC 2 cut(s) 138, 386
NciI CCSGG 1 cut(s) 234
NdeII GATC 3 cut(s) 8, 252, 593
NlaIII CATG 1 cut(s) 705
NspI RCATGY 1 cut(s) 705
NspV TTCGAA 1 cut(s) 327
PciI ACATGT 1 cut(s) 701
PdmI GAANNNNTTC 1 cut(s) 694
PfeI GAWTC 4 cut(s) 124, 183, 411, 638
PkrI GCNGC 2 cut(s) 209, 271
PleI GAGTC 2 cut(s) 254, 387
PpsI GAGTC 2 cut(s) 254, 387
PscI ACATGT 1 cut(s) 701
PshAI GACNNNNGTC 1 cut(s) 339
PspPI GGNCC 1 cut(s) 235
PsuI RGATCY 1 cut(s) 8
RseI CAYNNNNRTG 1 cut(s) 706
SatI GCNGC 2 cut(s) 208, 270
Sau3AI GATC 3 cut(s) 8, 252, 593
Sau96I GGNCC 1 cut(s) 235
SchI GAGTC 2 cut(s) 254, 387
ScrFI CCNGG 1 cut(s) 234
SetI ASST 9 cut(s) 19, 143, 274, 283, 343, 391, 438, 534, 584
SfuI TTCGAA 1 cut(s) 327
SmiMI CAYNNNNRTG 1 cut(s) 706
SmlI CTYRAG 1 cut(s) 312
SmoI CTYRAG 1 cut(s) 312
Sse9I AATT 2 cut(s) 449, 615
SspMI CTAG 3 cut(s) 135, 556, 652
StyD4I CCNGG 1 cut(s) 232
TaaI ACNGT 1 cut(s) 72
TaiI ACGT 1 cut(s) 343
TaqI TCGA 6 cut(s) 127, 327, 343, 391, 414, 475
TaqII GACCGA 1 cut(s) 163
TasI AATT 2 cut(s) 449, 615
TfiI GAWTC 4 cut(s) 124, 183, 411, 638
TscAI CASTG 3 cut(s) 408, 523, 713
TseI GCWGC 2 cut(s) 207, 269
TspGWI ACGGA 1 cut(s) 344
TspRI CASTG 3 cut(s) 408, 523, 713
XapI RAATTY 1 cut(s) 449
XceI RCATGY 1 cut(s) 705
XmnI GAANNNNTTC 1 cut(s) 694
XspI CTAG 3 cut(s) 135, 556, 652
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.