Rh2DG610500

BAG family molecular chaperone regulator 8

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2D
OG0013047
Physical Location & Seq
Forward (+)
84341031 .. 84342467
1437 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2DG610500.1

Sequence Viewer

Length: 1332 bp
ATGGCCTCTCACCACCCTCACCACCACCAAAACCACCCTCCCACCACCACTTGCTGCTGCACCACCTCCTACTCCTCCTGCCACTGCACCCAATCCTACCACCCCTACCCTCCACCACACCCACCTCAACCATCCCCAGACCCACTTCTCCAAGCCATTGCCTCTCAACTCCTCATTTCCAATCCCCCAGATCCCTACCTCCACCCCCACCAAAACCCTCACAAAACCCACAAATCTCAACACCCAAAACACCGTTCCCACATTCAAGAACACCAAGAACAGCATCTTCACTCTCTTCTTTCCAGAATCGAAGCCCTAGAAGCTTCTGTGCACCACTACTCCTCCAATCGCTCTCGGTCTTCGAATTCTTACTCTCTCAGAGACTATGCTGCTCGGGTTATTCAGACCCATTTCCGGGCCTTCCTTGTTCGCCGATCAAGGACTCTCAGGCAGCTCAAAGACCTCGCCTTTATCAAGTCTTCTTTCGCCTCTCTCAAGTCTTCGGTTTCGAACCAGACCCAGTTCGACTTTCACTCCGTTTCTCAGAAAGCACTCGCTTTGCTTACCAAGCTCGACTCCATTCAGTGTGGTGATTCGATTGTTAGAGATGGGAAGAGGTCTATAAGTAGAGATTTAGTTCGGTTCTTAGAGTTTATCGAAGGGGTTGTTGTGAAAAGGCAGGCGATTTGCTTGAAACCAGTGAAGAATGTGAGGTCTGTTCAAAATGTGAATAAGTCTAGGGGTTTGGGTAACAAATGTGGAGGTTTGGGGAGGGATCAGAGGGAGATGATTGGGAAATTGAGGGAGAGGATTGAGAAGATTCGCGGGTTTGCTAGAGTTTCAGAGAATGATGAGGAGGATGTGGAGCTGGAAGGGTTTCAACATGTCAGTGATGATGATGAAGAAAGTGTAGGTCAATATCGGAATGGGGCAGCGGTGAAGAGGCATGGGTTTCAACCTAAGGTGAAGAAGAGTGTGAGCTTTGCAGAGGATGGGAATGTGTTTAGGGTCTTTAGCAACAGCGATGAGGCTACGTCAAGTGGGGATGGGAGTGATTCCAGTGATGATCACGGAGAGCGTGTTGAGAACTGTAGTGAAGTTGAGGATGTTAAGGGCTTTGCTCAGGAGACTGAGGATGATGATGAGGCGCACTTAGAAAATGGCGGATCACCGCAGACCAGTGATGCAGAAAGAAACCCTAGAGCCAGAATGACTCAGAGAAGAGGCCATGGTCAGGGTCAGAATGAGCATTTGTTCTCCCCTCCTTTGCCTGTGAAGATGGATTCTAAAGATGTGGTGAAAATAAACAAGGGTGTAAAGATTGTGACATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006457 GO:0008150 GO:0009266 GO:0009506 GO:0009605 GO:0009607 GO:0009628 GO:0009987 GO:0016020 GO:0030054 GO:0043207 GO:0044464 GO:0050896 GO:0055044 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
BAG

Protein Analysis

443

Amino Acids

49.79

Weight (kDa)

8.3

Isoelectric Point (pI)

53.0

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013047)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G29310
fragaria_vesca FvH4_6g47270
malus_domestica MD00G1156300.v1.1 MD09G1062500.v1.1
prunus_persica Prupe.3G257800_v2.0.a1
pyrus_communis pycom111g05280 pycom17g05630
rosa_chinensis RchiOBHm_Chr2g0166341
rosa_laevigata RLG00000021611
rosa_multiflora Rmu_co8270777.1_g000001 Rmu_sc0030614.1_g000002
rosa_roxburghii Rroxscaffold_2G00084970
rosa_rugosa Rorug02G0522200
rosa_samantha Rh2AG588300 Rh2BG600300 Rh2CG571200 Rh2DG610500
rosa_wichuraiana Rw2G049030

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 825
AciI CCGC 4 cut(s) 825, 935, 1164, 1172
AclWI GGATC 3 cut(s) 185, 783, 1174
AcsI RAATTY 1 cut(s) 364
AfiI CCNNNNNNNGG 3 cut(s) 414, 415, 1234
AflIII ACRYGT 1 cut(s) 883
AgsI TTSAA 5 cut(s) 266, 694, 722, 881, 956
AjuI GAANNNNNNNTTGG 2 cut(s) 238, 270
AluBI AGCT 5 cut(s) 323, 454, 571, 868, 981
AluI AGCT 5 cut(s) 323, 454, 571, 868, 981
Alw21I GWGCWC 1 cut(s) 333
Alw26I GTCTC 2 cut(s) 375, 1121
Alw44I GTGCAC 1 cut(s) 329
AlwI GGATC 3 cut(s) 185, 783, 1174
Ama87I CYCGRG 1 cut(s) 393
AoxI GGCC 3 cut(s) 3, 417, 1225
ApaLI GTGCAC 1 cut(s) 329
ApeKI GCWGC 5 cut(s) 54, 57, 389, 451, 932
ApoI RAATTY 1 cut(s) 364
Asp700I GAANNNNTTC 1 cut(s) 876
AspLEI GCGC 1 cut(s) 1150
AspS9I GGNCC 1 cut(s) 417
AsuC2I CCSGG 1 cut(s) 416
AsuHPI GGTGA 6 cut(s) 11, 602, 949, 976, 1161, 1309
AsuII TTCGAA 2 cut(s) 362, 509
AvaI CYCGRG 1 cut(s) 393
AxyI CCTNAGG 1 cut(s) 960
BaeGI GKGCMC 1 cut(s) 333
BbsI GAAGAC 3 cut(s) 351, 471, 492
Bbv12I GWGCWC 1 cut(s) 333
BbvI GCAGC 5 cut(s) 41, 44, 376, 463, 944
BccI CCATC 5 cut(s) 139, 602, 986, 1040, 1273
BclI TGATCA 1 cut(s) 1066
BcnI CCSGG 1 cut(s) 416
BcoDI GTCTC 2 cut(s) 375, 1121
BfaI CTAG 4 cut(s) 317, 738, 834, 1200
BfmI CTRYAG 1 cut(s) 1090
BisI GCNGC 5 cut(s) 55, 58, 390, 452, 933
BlsI GCNGC 5 cut(s) 56, 59, 391, 453, 934
Bme1390I CCNGG 1 cut(s) 416
BmeT110I CYCGRG 1 cut(s) 393
BmgT120I GGNCC 1 cut(s) 417
BmrFI CCNGG 1 cut(s) 416
BmrI ACTGGG 1 cut(s) 514
BmsI GCATC 2 cut(s) 292, 1174
BmuI ACTGGG 1 cut(s) 514
BpiI GAAGAC 3 cut(s) 351, 471, 492
Bpu10I CCTNAGC 1 cut(s) 1122
Bpu14I TTCGAA 2 cut(s) 362, 509
BpuEI CTTGAG 1 cut(s) 479
BpuMI CCSGG 1 cut(s) 416
BsaJI CCNNGG 1 cut(s) 1228
BsaXI ACNNNNNCTCC 8 cut(s) 323, 326, 353, 356, 518, 548, 1065, 1095
Bsc4I CCNNNNNNNGG 3 cut(s) 414, 415, 1234
Bse1I ACTGG 4 cut(s) 520, 698, 1059, 1179
Bse21I CCTNAGG 1 cut(s) 960
Bse3DI GCAATG 1 cut(s) 156
BseDI CCNNGG 1 cut(s) 1228
BseGI GGATG 6 cut(s) 131, 865, 997, 1051, 1111, 1141
BseLI CCNNNNNNNGG 3 cut(s) 414, 415, 1234
BseMI GCAATG 1 cut(s) 156
BseMII CTCAG 6 cut(s) 391, 460, 557, 1122, 1136, 1229
BseNI ACTGG 4 cut(s) 520, 698, 1059, 1179
BseRI GAGGAG 4 cut(s) 64, 161, 331, 869
BseSI GKGCMC 1 cut(s) 333
BseXI GCAGC 5 cut(s) 41, 44, 376, 463, 944
BsgI GTGCAG 2 cut(s) 43, 70
Bsh1236I CGCG 1 cut(s) 825
BshFI GGCC 3 cut(s) 5, 419, 1227
BsiHKAI GWGCWC 1 cut(s) 333
BsiHKCI CYCGRG 1 cut(s) 393
BsiSI CCGG 1 cut(s) 415
BslI CCNNNNNNNGG 3 cut(s) 414, 415, 1234
BsmAI GTCTC 2 cut(s) 375, 1121
BsnI GGCC 3 cut(s) 5, 419, 1227
BsoBI CYCGRG 1 cut(s) 393
Bsp119I TTCGAA 2 cut(s) 362, 509
Bsp1286I GDGCHC 1 cut(s) 333
Bsp143I GATC 5 cut(s) 190, 434, 775, 1066, 1166
Bsp19I CCATGG 1 cut(s) 1228
BspACI CCGC 4 cut(s) 825, 935, 1164, 1172
BspANI GGCC 3 cut(s) 5, 419, 1227
BspCNI CTCAG 6 cut(s) 390, 459, 556, 1123, 1135, 1228
BspFNI CGCG 1 cut(s) 825
BspPI GGATC 3 cut(s) 185, 783, 1174
BspT104I TTCGAA 2 cut(s) 362, 509
BsrDI GCAATG 1 cut(s) 156
BsrI ACTGG 4 cut(s) 520, 698, 1059, 1179
BssECI CCNNGG 1 cut(s) 1228
BssMI GATC 5 cut(s) 190, 434, 775, 1066, 1166
BssT1I CCWWGG 1 cut(s) 1228
Bst4CI ACNGT 2 cut(s) 254, 1091
Bst6I CTCTTC 5 cut(s) 300, 608, 935, 965, 1216
BstBI TTCGAA 2 cut(s) 362, 509
BstC8I GCNNGC 1 cut(s) 681
BstDEI CTNAG 9 cut(s) 377, 446, 543, 646, 960, 1122, 1131, 1153, 1215
BstDSI CCRYGG 1 cut(s) 1228
BstF5I GGATG 6 cut(s) 131, 865, 997, 1051, 1111, 1141
BstFNI CGCG 1 cut(s) 825
BstHHI GCGC 1 cut(s) 1150
BstKTI GATC 5 cut(s) 193, 437, 778, 1069, 1169
BstMAI GTCTC 2 cut(s) 375, 1121
BstMBI GATC 5 cut(s) 190, 434, 775, 1066, 1166
BstMWI GCNNNNNNNGC 2 cut(s) 320, 568
BstNSI RCATGY 1 cut(s) 887
BstSCI CCNGG 1 cut(s) 414
BstSFI CTRYAG 1 cut(s) 1090
BstSLI GKGCMC 1 cut(s) 333
BstUI CGCG 1 cut(s) 825
BstV1I GCAGC 5 cut(s) 41, 44, 376, 463, 944
BstV2I GAAGAC 3 cut(s) 351, 471, 492
BstX2I RGATCY 1 cut(s) 190
BstYI RGATCY 1 cut(s) 190
Bsu36I CCTNAGG 1 cut(s) 960
BsuRI GGCC 3 cut(s) 5, 419, 1227
BtgI CCRYGG 1 cut(s) 1228
BtgZI GCGATG 1 cut(s) 1038
BtsCI GGATG 6 cut(s) 131, 865, 997, 1051, 1111, 1141
BtsI GCAGTG 1 cut(s) 82
BtsIMutI CAGTG 6 cut(s) 82, 590, 705, 895, 1066, 1186
Cac8I GCNNGC 1 cut(s) 681
CfoI GCGC 1 cut(s) 1150
Cfr13I GGNCC 1 cut(s) 417
CviAII CATG 4 cut(s) 884, 947, 1229, 1329
DdeI CTNAG 9 cut(s) 377, 446, 543, 646, 960, 1122, 1131, 1153, 1215
DpnI GATC 5 cut(s) 192, 436, 777, 1068, 1168
DpnII GATC 5 cut(s) 190, 434, 775, 1066, 1166
Eam1104I CTCTTC 5 cut(s) 300, 608, 935, 965, 1216
EarI CTCTTC 5 cut(s) 300, 608, 935, 965, 1216
EciI GGCGGA 1 cut(s) 1179
Eco130I CCWWGG 1 cut(s) 1228
Eco81I CCTNAGG 1 cut(s) 960
Eco88I CYCGRG 1 cut(s) 393
EcoRI GAATTC 1 cut(s) 364
EcoT14I CCWWGG 1 cut(s) 1228
ErhI CCWWGG 1 cut(s) 1228
FaeI CATG 4 cut(s) 887, 950, 1232, 1332
FaiI YATR 6 cut(s) 387, 623, 885, 948, 1230, 1330
FatI CATG 4 cut(s) 883, 946, 1228, 1328
FauI CCCGC 1 cut(s) 818
FbaI TGATCA 1 cut(s) 1066
Fnu4HI GCNGC 5 cut(s) 55, 58, 390, 452, 933
FokI GGATG 6 cut(s) 118, 872, 1004, 1058, 1118, 1148
Fsp4HI GCNGC 5 cut(s) 55, 58, 390, 452, 933
FspBI CTAG 4 cut(s) 317, 738, 834, 1200
GlaI GCGC 1 cut(s) 1149
GluI GCNGC 5 cut(s) 55, 58, 390, 452, 933
HaeIII GGCC 3 cut(s) 5, 419, 1227
HapII CCGG 1 cut(s) 415
HhaI GCGC 1 cut(s) 1150
Hin1II CATG 4 cut(s) 887, 950, 1232, 1332
Hin6I GCGC 1 cut(s) 1148
HinP1I GCGC 1 cut(s) 1148
HindIII AAGCTT 1 cut(s) 321
HinfI GANTC 8 cut(s) 306, 442, 575, 593, 820, 1055, 1213, 1283
HpaII CCGG 1 cut(s) 415
HphI GGTGA 6 cut(s) 11, 602, 949, 976, 1161, 1309
Hpy166II GTNNAC 1 cut(s) 331
Hpy188I TCNGA 8 cut(s) 380, 405, 546, 780, 844, 924, 1218, 1242
Hpy188III TCNNGA 3 cut(s) 266, 303, 1124
Hpy8I GTNNAC 1 cut(s) 331
HpyAV CCTTC 3 cut(s) 430, 653, 866
HpyCH4III ACNGT 2 cut(s) 254, 1091
HpyCH4IV ACGT 1 cut(s) 1034
HpyCH4V TGCA 5 cut(s) 60, 87, 331, 986, 1187
HpyF10VI GCNNNNNNNGC 2 cut(s) 320, 568
HpyF3I CTNAG 9 cut(s) 377, 446, 543, 646, 960, 1122, 1131, 1153, 1215
HpySE526I ACGT 1 cut(s) 1034
Hsp92II CATG 4 cut(s) 887, 950, 1232, 1332
HspAI GCGC 1 cut(s) 1148
Ksp22I TGATCA 1 cut(s) 1066
Kzo9I GATC 5 cut(s) 190, 434, 775, 1066, 1166
LmnI GCTCC 1 cut(s) 865
Lsp1109I GCAGC 5 cut(s) 41, 44, 376, 463, 944
LweI GCATC 2 cut(s) 292, 1174
MaeI CTAG 4 cut(s) 317, 738, 834, 1200
MaeII ACGT 1 cut(s) 1034
MaeIII GTNAC 2 cut(s) 749, 1324
MalI GATC 5 cut(s) 192, 436, 777, 1068, 1168
MboI GATC 5 cut(s) 190, 434, 775, 1066, 1166
MflI RGATCY 1 cut(s) 190
MhlI GDGCHC 1 cut(s) 333
MluCI AATT 2 cut(s) 364, 797
MlyI GAGTC 3 cut(s) 436, 569, 1207
MroXI GAANNNNTTC 1 cut(s) 876
MseI TTAA 1 cut(s) 1110
MslI CAYNNNNRTG 1 cut(s) 888
MspA1I CMGCKG 1 cut(s) 935
MspI CCGG 1 cut(s) 415
MspR9I CCNGG 1 cut(s) 416
MvnI CGCG 1 cut(s) 825
MwoI GCNNNNNNNGC 2 cut(s) 320, 568
NciI CCSGG 1 cut(s) 416
NcoI CCATGG 1 cut(s) 1228
NdeII GATC 5 cut(s) 190, 434, 775, 1066, 1166
NlaIII CATG 4 cut(s) 887, 950, 1232, 1332
NmuCI GTSAC 1 cut(s) 1324
NspI RCATGY 1 cut(s) 887
NspV TTCGAA 2 cut(s) 362, 509
PciI ACATGT 1 cut(s) 883
PdmI GAANNNNTTC 1 cut(s) 876
PfeI GAWTC 5 cut(s) 306, 593, 820, 1055, 1283
PkrI GCNGC 5 cut(s) 56, 59, 391, 453, 934
PleI GAGTC 3 cut(s) 436, 569, 1207
PpsI GAGTC 3 cut(s) 436, 569, 1207
PscI ACATGT 1 cut(s) 883
PspPI GGNCC 1 cut(s) 417
PsuI RGATCY 1 cut(s) 190
RseI CAYNNNNRTG 1 cut(s) 888
SaqAI TTAA 1 cut(s) 1110
SatI GCNGC 5 cut(s) 55, 58, 390, 452, 933
Sau3AI GATC 5 cut(s) 190, 434, 775, 1066, 1166
Sau96I GGNCC 1 cut(s) 417
SchI GAGTC 3 cut(s) 436, 569, 1207
ScrFI CCNGG 1 cut(s) 416
SduI GDGCHC 1 cut(s) 333
SfaNI GCATC 2 cut(s) 292, 1174
SfcI CTRYAG 1 cut(s) 1090
SfuI TTCGAA 2 cut(s) 362, 509
SmiMI CAYNNNNRTG 1 cut(s) 888
SmlI CTYRAG 1 cut(s) 494
SmoI CTYRAG 1 cut(s) 494
Sse9I AATT 2 cut(s) 364, 797
SsiI CCGC 4 cut(s) 825, 935, 1164, 1172
SspMI CTAG 4 cut(s) 317, 738, 834, 1200
StyD4I CCNGG 1 cut(s) 414
StyI CCWWGG 1 cut(s) 1228
TaaI ACNGT 2 cut(s) 254, 1091
TaiI ACGT 1 cut(s) 1037
TaqI TCGA 7 cut(s) 309, 362, 509, 525, 573, 596, 657
TaqII GACCGA 1 cut(s) 345
TasI AATT 2 cut(s) 364, 797
TfiI GAWTC 5 cut(s) 306, 593, 820, 1055, 1283
Tru1I TTAA 1 cut(s) 1110
Tru9I TTAA 1 cut(s) 1110
TscAI CASTG 6 cut(s) 89, 590, 705, 895, 1066, 1186
TseFI GTSAC 1 cut(s) 1324
TseI GCWGC 5 cut(s) 54, 57, 389, 451, 932
Tsp45I GTSAC 1 cut(s) 1324
TspDTI ATGAA 1 cut(s) 915
TspGWI ACGGA 2 cut(s) 526, 1086
TspRI CASTG 6 cut(s) 89, 590, 705, 895, 1066, 1186
VneI GTGCAC 1 cut(s) 329
XapI RAATTY 1 cut(s) 364
XceI RCATGY 1 cut(s) 887
XmnI GAANNNNTTC 1 cut(s) 876
XspI CTAG 4 cut(s) 317, 738, 834, 1200
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.