AT3G49142

pentatricopeptide repeat-containing protein At3g49142

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
OG0017209
Physical Location & Seq
Reverse (-)
18215788 .. 18217884
2097 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G49142.1

Sequence Viewer

Length: 2061 bp
ATGAAACGCATCAATGTCGATCTCCATCTTCTCCATTTTCCGAAATTCAGAAAATTTCAATCACGAAAAGTATCTTCGTCCCTACCCAAATTGGAACTCGATCAGAAATCACCACAGGAGACAGTTTTCTTACTTGGTCAGGTACTTGACACTTACCCAGATATCAGAACACTTAGAACAGTCCACTCAAGAATCATTTTGGAAGATCTACGTTGTAATTCTTCTTTGGGTGTTAAACTTATGAGAGCTTATGCTTCTCTAAAAGATGTAGCGTCAGCACGCAAGGTGTTCGACGAAATTCCTGAGAGAAACGTAATTATCATTAATGTTATGATTAGAAGCTATGTGAATAATGGGTTTTACGGTGAAGGTGTTAAAGTGTTTGGGACGATGTGTGGTTGTAATGTTAGACCTGATCATTATACTTTCCCGTGTGTTCTAAAGGCGTGTTCTTGCTCTGGGACTATTGTCATTGGGAGGAAAATTCATGGGTCTGCTACAAAAGTTGGGCTCTCTTCGACTTTGTTTGTTGGGAATGGTTTAGTTTCTATGTATGGAAAGTGTGGATTTTTATCTGAAGCAAGGCTTGTACTTGACGAGATGTCTAGGAGAGATGTGGTGTCTTGGAACTCGTTGGTTGTTGGGTATGCGCAAAATCAGAGATTTGATGATGCTTTGGAGGTTTGTAGGGAAATGGAGTCTGTGAAGATAAGCCATGATGCTGGTACGATGGCTAGTCTGTTACCAGCAGTGAGTAACACTACAACTGAAAACGTTATGTATGTTAAAGATATGTTTTTTAAAATGGGGAAAAAGAGTTTGGTTTCATGGAATGTGATGATCGGTGTGTATATGAAAAATGCGATGCCTGTTGAAGCTGTGGAATTGTATTCCCGAATGGAGGCTGATGGGTTTGAACCTGATGCAGTCTCAATCACAAGTGTATTACCTGCTTGTGGAGATACCTCTGCTCTGTCTCTTGGTAAGAAAATCCATGGATACATTGAGAGGAAGAAGCTGATACCAAATCTGTTGTTAGAGAATGCACTGATCGACATGTATGCAAAATGCGGATGTTTAGAGAAAGCTAGAGATGTGTTTGAGAACATGAAGTCACGTGATGTTGTGTCTTGGACAGCTATGATTTCAGCTTATGGATTCAGCGGACGAGGCTGTGACGCAGTGGCATTGTTTTCGAAATTGCAAGATTCGGGTCTCGTCCCTGATTCAATTGCGTTTGTCACAACGCTTGCTGCTTGTAGCCATGCGGGGTTACTAGAAGAAGGTAGGAGTTGTTTCAAACTCATGACAGATCATTACAAGATCACTCCTAGGTTAGAGCATTTGGCTTGTATGGTGGATCTTCTTGGCCGAGCCGGGAAAGTGAAAGAAGCTTACAGATTTATACAAGATATGTCAATGGAACCAAACGAGAGAGTTTGGGGAGCATTATTAGGAGCTTGCAGGGTGCATTCTGATACAGACATCGGTCTACTAGCAGCTGATAAACTTTTCCAGTTAGCACCCGAGCAATCGGGTTACTACGTATTGCTTTCTAACATATACGCAAAGGCTGGAAGATGGGAAGAAGTGACTAACATCAGAAACATAATGAAGAGCAAAGGGTTAAAGAAGAATCCCGGAGCAAGCAATGTTGAGGTCAACAGAATAATTCATACATTCTTAGTAGGCGACAGGTCACACCCGCAATCCGATGAGATATACAGAGAGCTGGATGTTCTAGTAAAGAAAATGAAAGAGTTAGGTTATGTTCCTGATTCAGAGTCAGCGCTTCACGATGTGGAAGAGGAAGATAAAGAGACGCATTTAGCTGTTCACAGTGAGAAATTAGCCATTGTGTTTGCTCTGATGAACACTAAGGAGGAAGAAGAAGACAGTAATAATACCATAAGAATAACGAAGAATCTTAGGATATGTGGAGACTGTCATGTTGCAGCTAAGCTTATCTCACAGATAACTTCTCGAGAGATAATCATCAGAGACACTAATAGATTTCATGTGTTCCGGTTCGGTGTTTGCTCTTGTGGTGACTATTGGTGA

Protein Analysis

686

Amino Acids

76.73

Weight (kDa)

7.96

Isoelectric Point (pI)

40.9

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 103 - 151 5.1e-07 PPR repeat family
PPR_2 PF13041 204 - 249 4.8e-06 PPR repeat family
PPR_2 PF13041 273 - 319 3.6e-09 PPR repeat family
PPR PF01535 275 - 305 3.9e-06 PPR repeat
PPR PF01535 348 - 374 7.8e-06 PPR repeat
PPR_2 PF13041 373 - 421 5.9e-07 PPR repeat family
E_motif PF20431 491 - 553 6.2e-20 E motif
Eplus_motif PF20430 558 - 585 1.6e-10 E+ motif
DYW_deaminase PF14432 589 - 686 1.8e-36 DYW family of nucleic acid deaminases
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0017209)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G49142
fragaria_vesca FvH4_7g08230
malus_domestica MD07G1283100.v1.1
prunus_persica Prupe.2G305300_v2.0.a1
pyrus_communis pycom07g25720
rosa_laevigata RLG00000029048
rosa_multiflora Rmu_sc0002200.1_g000053
rosa_roxburghii Rroxscaffold_4G00311530
rosa_rugosa Rorug01G0161000.1
rosa_samantha Rh1AG176000 Rh1BG144100
rosa_wichuraiana Rw0G004940 Rw1G014650

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 651
Acc36I ACCTGC 1 cut(s) 958
AccI GTMKAC 1 cut(s) 1492
AciI CCGC 4 cut(s) 1071, 1164, 1268, 1706
AclI AACGTT 1 cut(s) 774
AclWI GGATC 1 cut(s) 1368
AcoI YGGCCR 1 cut(s) 1369
AcsI RAATTY 4 cut(s) 44, 53, 297, 483
AcuI CTGAAG 1 cut(s) 597
AcvI CACGTG 1 cut(s) 1118
AdeI CACNNNGTG 1 cut(s) 1801
AfaI GTAC 3 cut(s) 144, 591, 727
AfeI AGCGCT 1 cut(s) 1791
AfiI CCNNNNNNNGG 2 cut(s) 901, 956
AflIII ACRYGT 1 cut(s) 1056
AgsI TTSAA 5 cut(s) 59, 875, 917, 1230, 1300
AhdI GACNNNNNGTC 1 cut(s) 601
AjuI GAANNNNNNNTTGG 2 cut(s) 803, 835
Alw26I GTCTC 7 cut(s) 113, 934, 981, 1220, 1814, 1935, 1995
AlwI GGATC 1 cut(s) 1368
Ama87I CYCGRG 2 cut(s) 1526, 1983
Aor51HI AGCGCT 1 cut(s) 1791
AoxI GGCC 1 cut(s) 1369
ApeKI GCWGC 3 cut(s) 1253, 1499, 1955
ApoI RAATTY 4 cut(s) 44, 53, 297, 483
AseI ATTAAT 1 cut(s) 324
AspA2I CCTAGG 1 cut(s) 1331
AspLEI GCGC 2 cut(s) 652, 1792
AsuC2I CCSGG 2 cut(s) 1378, 1641
AsuHPI GGTGA 3 cut(s) 102, 377, 2060
AsuII TTCGAA 1 cut(s) 1196
AvaI CYCGRG 2 cut(s) 1526, 1983
AvrII CCTAGG 1 cut(s) 1331
BanII GRGCYC 1 cut(s) 513
BbrPI CACGTG 1 cut(s) 1118
BbsI GAAGAC 1 cut(s) 1899
BbvI GCAGC 3 cut(s) 1240, 1511, 1967
BccI CCATC 4 cut(s) 33, 724, 902, 1575
BcgI CGANNNNNNTGC 7 cut(s) 32, 271, 305, 1043, 1077, 1176, 1210
BciVI GTATCC 1 cut(s) 992
BclI TGATCA 1 cut(s) 415
BcnI CCSGG 2 cut(s) 1378, 1641
BcoDI GTCTC 7 cut(s) 113, 934, 981, 1220, 1814, 1935, 1995
BfaI CTAG 7 cut(s) 606, 735, 1089, 1277, 1332, 1496, 1742
BfoI RGCGCY 1 cut(s) 1793
BfuAI ACCTGC 1 cut(s) 958
BfuI GTATCC 1 cut(s) 992
BglII AGATCT 1 cut(s) 205
BisI GCNGC 3 cut(s) 1254, 1500, 1956
BlnI CCTAGG 1 cut(s) 1331
BlpI GCTNAGC 1 cut(s) 1959
BlsI GCNGC 3 cut(s) 1255, 1501, 1957
Bme1390I CCNGG 2 cut(s) 1378, 1641
BmeRI GACNNNNNGTC 1 cut(s) 601
BmeT110I CYCGRG 2 cut(s) 1526, 1983
BmiI GGNNCC 1 cut(s) 1425
BmrFI CCNGG 2 cut(s) 1378, 1641
BmsI GCATC 5 cut(s) 18, 661, 709, 855, 913
BoxI GACNNNNGTC 2 cut(s) 467, 1488
BpiI GAAGAC 1 cut(s) 1899
Bpu1102I GCTNAGC 1 cut(s) 1959
Bpu14I TTCGAA 1 cut(s) 1196
BpuEI CTTGAG 1 cut(s) 172
BpuMI CCSGG 2 cut(s) 1378, 1641
BsaAI YACGTR 2 cut(s) 1118, 1546
BsaBI GATNNNNATC 3 cut(s) 24, 571, 1994
BsaI GGTCTC 1 cut(s) 1220
BsaJI CCNNGG 2 cut(s) 994, 1331
BsaWI WCCGGW 1 cut(s) 2025
Bsc4I CCNNNNNNNGG 2 cut(s) 901, 956
Bse1I ACTGG 1 cut(s) 1516
Bse3DI GCAATG 1 cut(s) 1657
Bse8I GATNNNNATC 3 cut(s) 24, 571, 1994
BseDI CCNNGG 2 cut(s) 994, 1331
BseGI GGATG 2 cut(s) 1079, 1741
BseJI GATNNNNATC 3 cut(s) 24, 571, 1994
BseLI CCNNNNNNNGG 2 cut(s) 901, 956
BseMI GCAATG 1 cut(s) 1657
BseMII CTCAG 1 cut(s) 294
BseNI ACTGG 1 cut(s) 1516
BseXI GCAGC 3 cut(s) 1240, 1511, 1967
BshFI GGCC 1 cut(s) 1371
BsiHKCI CYCGRG 2 cut(s) 1526, 1983
BsiSI CCGG 3 cut(s) 1377, 1641, 2026
BslFI GGGAC 4 cut(s) 64, 400, 475, 1205
BslI CCNNNNNNNGG 2 cut(s) 901, 956
BsmAI GTCTC 7 cut(s) 113, 934, 981, 1220, 1814, 1935, 1995
BsmBI CGTCTC 1 cut(s) 1814
BsmFI GGGAC 4 cut(s) 64, 400, 475, 1205
BsmI GAATGC 2 cut(s) 1048, 1471
BsnI GGCC 1 cut(s) 1371
Bso31I GGTCTC 1 cut(s) 1220
BsoBI CYCGRG 2 cut(s) 1526, 1983
Bsp119I TTCGAA 1 cut(s) 1196
Bsp1286I GDGCHC 1 cut(s) 513
Bsp143I GATC 9 cut(s) 19, 100, 205, 415, 840, 1050, 1312, 1323, 1360
Bsp1720I GCTNAGC 1 cut(s) 1959
Bsp19I CCATGG 1 cut(s) 994
BspACI CCGC 4 cut(s) 1071, 1164, 1268, 1706
BspANI GGCC 1 cut(s) 1371
BspCNI CTCAG 1 cut(s) 295
BspHI TCATGA 1 cut(s) 1305
BspLI GGNNCC 1 cut(s) 1425
BspMI ACCTGC 1 cut(s) 958
BspPI GGATC 1 cut(s) 1368
BspQI GCTCTTC 1 cut(s) 1610
BspT104I TTCGAA 1 cut(s) 1196
BspTNI GGTCTC 1 cut(s) 1220
BsrDI GCAATG 1 cut(s) 1657
BsrI ACTGG 1 cut(s) 1516
BssECI CCNNGG 2 cut(s) 994, 1331
BssMI GATC 9 cut(s) 19, 100, 205, 415, 840, 1050, 1312, 1323, 1360
BssT1I CCWWGG 2 cut(s) 994, 1331
Bst4CI ACNGT 6 cut(s) 124, 181, 365, 1841, 1898, 1946
Bst6I CTCTTC 3 cut(s) 520, 1610, 1800
BstBAI YACGTR 2 cut(s) 1118, 1546
BstBI TTCGAA 1 cut(s) 1196
BstC8I GCNNGC 4 cut(s) 280, 1251, 1462, 1648
BstDEI CTNAG 6 cut(s) 173, 303, 1684, 1878, 1928, 1959
BstDSI CCRYGG 1 cut(s) 994
BstF5I GGATG 2 cut(s) 1079, 1741
BstH2I RGCGCY 1 cut(s) 1793
BstHHI GCGC 2 cut(s) 652, 1792
BstKTI GATC 9 cut(s) 22, 103, 208, 418, 843, 1053, 1315, 1326, 1363
BstMAI GTCTC 7 cut(s) 113, 934, 981, 1220, 1814, 1935, 1995
BstMBI GATC 9 cut(s) 19, 100, 205, 415, 840, 1050, 1312, 1323, 1360
BstMWI GCNNNNNNNGC 1 cut(s) 1170
BstNSI RCATGY 1 cut(s) 1060
BstPAI GACNNNNGTC 2 cut(s) 467, 1488
BstSCI CCNGG 2 cut(s) 1376, 1639
BstSNI TACGTA 1 cut(s) 1546
BstV1I GCAGC 3 cut(s) 1240, 1511, 1967
BstV2I GAAGAC 1 cut(s) 1899
BstX2I RGATCY 2 cut(s) 205, 1360
BstXI CCANNNNNNTGG 1 cut(s) 722
BstYI RGATCY 2 cut(s) 205, 1360
BsuI GTATCC 1 cut(s) 992
BsuRI GGCC 1 cut(s) 1371
BtgI CCRYGG 1 cut(s) 994
BtgZI GCGATG 1 cut(s) 878
BtsCI GGATG 2 cut(s) 1079, 1741
BtsI GCAGTG 2 cut(s) 756, 1188
BtsIMutI CAGTG 4 cut(s) 756, 1046, 1188, 1846
BveI ACCTGC 1 cut(s) 958
Cac8I GCNNGC 4 cut(s) 280, 1251, 1462, 1648
CciI TCATGA 1 cut(s) 1305
CfoI GCGC 2 cut(s) 652, 1792
CseI GACGC 3 cut(s) 261, 1187, 1831
Csp6I GTAC 3 cut(s) 143, 590, 726
CviQI GTAC 3 cut(s) 143, 590, 726
DdeI CTNAG 6 cut(s) 173, 303, 1684, 1878, 1928, 1959
DpnI GATC 9 cut(s) 21, 102, 207, 417, 842, 1052, 1314, 1325, 1362
DpnII GATC 9 cut(s) 19, 100, 205, 415, 840, 1050, 1312, 1323, 1360
DraI TTTAAA 1 cut(s) 802
DraIII CACNNNGTG 1 cut(s) 1801
DriI GACNNNNNGTC 1 cut(s) 601
EaeI YGGCCR 1 cut(s) 1369
Eam1104I CTCTTC 3 cut(s) 520, 1610, 1800
Eam1105I GACNNNNNGTC 1 cut(s) 601
EarI CTCTTC 3 cut(s) 520, 1610, 1800
Eco105I TACGTA 1 cut(s) 1546
Eco130I CCWWGG 2 cut(s) 994, 1331
Eco24I GRGCYC 1 cut(s) 513
Eco31I GGTCTC 1 cut(s) 1220
Eco32I GATATC 1 cut(s) 163
Eco47III AGCGCT 1 cut(s) 1791
Eco57I CTGAAG 1 cut(s) 597
Eco72I CACGTG 1 cut(s) 1118
Eco88I CYCGRG 2 cut(s) 1526, 1983
EcoRV GATATC 1 cut(s) 163
EcoT14I CCWWGG 2 cut(s) 994, 1331
EcoT38I GRGCYC 1 cut(s) 513
ErhI CCWWGG 2 cut(s) 994, 1331
Esp3I CGTCTC 1 cut(s) 1814
FalI AAGNNNNNCTT 2 cut(s) 570, 602
FaqI GGGAC 4 cut(s) 64, 400, 475, 1205
FauI CCCGC 2 cut(s) 1261, 1713
FbaI TGATCA 1 cut(s) 415
FblI GTMKAC 1 cut(s) 1492
Fnu4HI GCNGC 3 cut(s) 1254, 1500, 1956
FokI GGATG 2 cut(s) 1086, 1748
FriOI GRGCYC 1 cut(s) 513
Fsp4HI GCNGC 3 cut(s) 1254, 1500, 1956
FspBI CTAG 7 cut(s) 606, 735, 1089, 1277, 1332, 1496, 1742
FspI TGCGCA 1 cut(s) 651
GlaI GCGC 2 cut(s) 651, 1791
GluI GCNGC 3 cut(s) 1254, 1500, 1956
HaeII RGCGCY 1 cut(s) 1793
HaeIII GGCC 1 cut(s) 1371
HapII CCGG 3 cut(s) 1377, 1641, 2026
HgaI GACGC 3 cut(s) 261, 1187, 1831
HhaI GCGC 2 cut(s) 652, 1792
Hin6I GCGC 2 cut(s) 650, 1790
HinP1I GCGC 2 cut(s) 650, 1790
HincII GTYRAC 1 cut(s) 1663
HindII GTYRAC 1 cut(s) 1663
HindIII AAGCTT 2 cut(s) 1392, 1961
HinfI GANTC 9 cut(s) 192, 698, 1158, 1208, 1226, 1636, 1778, 1784, 1924
HpaII CCGG 3 cut(s) 1377, 1641, 2026
HphI GGTGA 3 cut(s) 102, 377, 2060
Hpy166II GTNNAC 4 cut(s) 184, 1493, 1663, 1837
Hpy188III TCNNGA 9 cut(s) 63, 189, 302, 894, 1306, 1775, 1796, 1983, 1985
Hpy8I GTNNAC 4 cut(s) 184, 1493, 1663, 1837
Hpy99I CGWCG 1 cut(s) 296
HpyAV CCTTC 2 cut(s) 362, 1277
HpyCH4III ACNGT 6 cut(s) 124, 181, 365, 1841, 1898, 1946
HpyCH4IV ACGT 5 cut(s) 211, 312, 774, 1117, 1545
HpyCH4V TGCA 7 cut(s) 926, 1046, 1064, 1204, 1464, 1471, 1955
HpyF10VI GCNNNNNNNGC 1 cut(s) 1170
HpyF3I CTNAG 6 cut(s) 173, 303, 1684, 1878, 1928, 1959
HpySE526I ACGT 5 cut(s) 211, 312, 774, 1117, 1545
HspAI GCGC 2 cut(s) 650, 1790
Ksp22I TGATCA 1 cut(s) 415
Kzo9I GATC 9 cut(s) 19, 100, 205, 415, 840, 1050, 1312, 1323, 1360
LguI GCTCTTC 1 cut(s) 1610
LmnI GCTCC 3 cut(s) 1445, 1457, 1643
Lsp1109I GCAGC 3 cut(s) 1240, 1511, 1967
LweI GCATC 5 cut(s) 18, 661, 709, 855, 913
MaeI CTAG 7 cut(s) 606, 735, 1089, 1277, 1332, 1496, 1742
MaeII ACGT 5 cut(s) 211, 312, 774, 1117, 1545
MalI GATC 9 cut(s) 21, 102, 207, 417, 842, 1052, 1314, 1325, 1362
MboI GATC 9 cut(s) 19, 100, 205, 415, 840, 1050, 1312, 1323, 1360
MfeI CAATTG 1 cut(s) 1230
MflI RGATCY 2 cut(s) 205, 1360
MhlI GDGCHC 1 cut(s) 513
MlyI GAGTC 2 cut(s) 707, 1793
MnlI CCTC 9 cut(s) 471, 673, 895, 976, 1002, 1163, 1651, 1801, 1876
MseI TTAA 6 cut(s) 234, 324, 375, 786, 801, 1628
MspA1I CMGCKG 2 cut(s) 1164, 1502
MspI CCGG 3 cut(s) 1377, 1641, 2026
MspR9I CCNGG 2 cut(s) 1378, 1641
MunI CAATTG 1 cut(s) 1230
Mva1269I GAATGC 2 cut(s) 1048, 1471
MwoI GCNNNNNNNGC 1 cut(s) 1170
NciI CCSGG 2 cut(s) 1378, 1641
NcoI CCATGG 1 cut(s) 994
NdeII GATC 9 cut(s) 19, 100, 205, 415, 840, 1050, 1312, 1323, 1360
NlaIV GGNNCC 1 cut(s) 1425
NmeAIII GCCGAG 1 cut(s) 1397
NmuCI GTSAC 6 cut(s) 1113, 1175, 1240, 1591, 1698, 2048
NsbI TGCGCA 1 cut(s) 651
NspI RCATGY 1 cut(s) 1060
NspV TTCGAA 1 cut(s) 1196
PaeR7I CTCGAG 1 cut(s) 1983
PagI TCATGA 1 cut(s) 1305
PciI ACATGT 1 cut(s) 1056
PciSI GCTCTTC 1 cut(s) 1610
PctI GAATGC 2 cut(s) 1048, 1471
PfeI GAWTC 7 cut(s) 192, 1158, 1208, 1226, 1636, 1778, 1924
PfoI TCCNGGA 1 cut(s) 1639
PkrI GCNGC 3 cut(s) 1255, 1501, 1957
PleI GAGTC 2 cut(s) 706, 1792
PmaCI CACGTG 1 cut(s) 1118
PmlI CACGTG 1 cut(s) 1118
PpsI GAGTC 2 cut(s) 706, 1792
Ppu21I YACGTR 2 cut(s) 1118, 1546
PscI ACATGT 1 cut(s) 1056
PshAI GACNNNNGTC 2 cut(s) 467, 1488
PshBI ATTAAT 1 cut(s) 324
Psp1406I AACGTT 1 cut(s) 774
PspCI CACGTG 1 cut(s) 1118
PspN4I GGNNCC 1 cut(s) 1425
PsuI RGATCY 2 cut(s) 205, 1360
PvuII CAGCTG 1 cut(s) 1502
RsaI GTAC 3 cut(s) 144, 591, 727
RsaNI GTAC 3 cut(s) 143, 590, 726
SapI GCTCTTC 1 cut(s) 1610
SaqAI TTAA 6 cut(s) 234, 324, 375, 786, 801, 1628
SatI GCNGC 3 cut(s) 1254, 1500, 1956
Sau3AI GATC 9 cut(s) 19, 100, 205, 415, 840, 1050, 1312, 1323, 1360
SchI GAGTC 2 cut(s) 707, 1793
ScrFI CCNGG 2 cut(s) 1378, 1641
SduI GDGCHC 1 cut(s) 513
SfaNI GCATC 5 cut(s) 18, 661, 709, 855, 913
Sfr274I CTCGAG 1 cut(s) 1983
SfuI TTCGAA 1 cut(s) 1196
SlaI CTCGAG 1 cut(s) 1983
SmlI CTYRAG 2 cut(s) 187, 1983
SmoI CTYRAG 2 cut(s) 187, 1983
SnaBI TACGTA 1 cut(s) 1546
SsiI CCGC 4 cut(s) 1071, 1164, 1268, 1706
SspMI CTAG 7 cut(s) 606, 735, 1089, 1277, 1332, 1496, 1742
StyD4I CCNGG 2 cut(s) 1376, 1639
StyI CCWWGG 2 cut(s) 994, 1331
TaaI ACNGT 6 cut(s) 124, 181, 365, 1841, 1898, 1946
TaiI ACGT 5 cut(s) 214, 315, 777, 1120, 1548
TaqI TCGA 7 cut(s) 18, 99, 291, 518, 1053, 1196, 1984
TaqII GACCGA 1 cut(s) 1478
TatI WGTACW 1 cut(s) 589
TfiI GAWTC 7 cut(s) 192, 1158, 1208, 1226, 1636, 1778, 1924
Tru1I TTAA 6 cut(s) 234, 324, 375, 786, 801, 1628
Tru9I TTAA 6 cut(s) 234, 324, 375, 786, 801, 1628
TscAI CASTG 4 cut(s) 756, 1053, 1188, 1846
TseFI GTSAC 6 cut(s) 1113, 1175, 1240, 1591, 1698, 2048
TseI GCWGC 3 cut(s) 1253, 1499, 1955
Tsp45I GTSAC 6 cut(s) 1113, 1175, 1240, 1591, 1698, 2048
TspRI CASTG 4 cut(s) 756, 1053, 1188, 1846
VspI ATTAAT 1 cut(s) 324
XapI RAATTY 4 cut(s) 44, 53, 297, 483
XceI RCATGY 1 cut(s) 1060
XhoI CTCGAG 1 cut(s) 1983
XmaJI CCTAGG 1 cut(s) 1331
XmiI GTMKAC 1 cut(s) 1492
XspI CTAG 7 cut(s) 606, 735, 1089, 1277, 1332, 1496, 1742
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.