Prupe.2G305300_v2.0.a1

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
OG0017209
Physical Location & Seq
Reverse (-)
29108545 .. 29111068
2524 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G305300.1

Sequence Viewer

Length: 2037 bp
ATGAAAGTCGTCACTCCCATTTCCCGCCAATTTTCAACTGCCAAACAACTACAAGCCTTGACATCATCGATCAGAAAAGCCGAAGCTGCCCCTCGGGACCCAGCTCTTGCAGCTCAAGTCTTTGGTAAAATATTGGACCAAGACCCAGATATCAGAACGTTGAAGGAACTCCATTCAAGCATCGTTGTCGATCAACGTCTCCGCTCGGACGCATCACTAGGTATCAAACTCATGAGAGCTTATGCTGCCTGCGGAGAACCAAGAATCACACGCCACCTATTCGATAGAATTCCTGAGAAGAATGTCGTGTTCTTTAATGTCATGATCAGGAGCTATGTAAACAACCATTTGTACCACGATGCTCTTCTTGTTTACAAAACTATGTCTCACAATGGTTTTGACCCTGATAATTATACATACCCTTGTGTCCTAAAGGCATGTTCTGGGTCAGATAATTTGTGGGTCGGGTTGCAAATTCATGGCGCTGTTGTGAAAGTTGGCCTTGACATGAATTTATTTATTGGAAATGGTCTGATTGCTATGTATGGAAAATGCCGTTGTTTAGTGGAAGCTCGGAGCGTTCTTGATCAGATGCCTTGCAGAGATGTGATTTCTTGTAATTCTATGGTTGCTGGGTATGCGCAAAATGGACGGTTTAATGATGCATTAGAAGTTTGTAGGGAAATGGAGGCATTCAAGCTTAAACCAGATGCTGGCACCATGGCTAGCCTATTCCAGGCCGTGACTAATACTTCAGCTGACAATGTTTTGTATGTTAAGGAGATGTTTATGAAATTGGTTAAAAAGAGTTTGGTTTCGTGGAATGTGATGATAGCAGTGTATGTGAATAATTCAATGCCTGGTGAAGCAGTTGATCTTTTCTTACAGTTGGAGGTGAGTGGGATAGAACCTGATGCAGTCACAATTGCCAGTGTTCTTCCTGCTTGTGGGGATCTTTCAGCTCTGTTGTTAGGGAAGCGAATTCATGAATATGTTGAGAGAAAGAGACTTAGGCCAAATTTGTTATTAGAGAATGCATTGATTGACATGTATGCAAAGTGCGGATGTTTACAAGATGCAAGAGAAGTGTTTGATGCGATGAAATTTCAGGATGTTGTATCGTGGACTTCCATGATGTCTGCATATGGCAGGTGTGGACAAGGTCATGATGCTGTGGCACTTTTTCGGAAAATGCAAGACTCAGGCGTGAGTCCTGATTCAATTGCATTTGTATCAGTTATGGCGGCTTGCAGCCATGCTGGATTGTTAGAAGAGGGGCAGTATTACTTTAACTTGATGACCAAGGAGTGCAGGATAGAGCCTAGGATAGAACACTTCGCTTGCATGGTAGATCTTTTAGGGCGTGCTGGGAGAGTGGATGAGGCATATAGTTTTGTCAAACAGATGTCTCTGGAGCCTAATGAAAGAGTGTGGGGTGCTCTGCTTAGTGCTTGCCGGGTATACTCTAACATGAATGTTGGACTTCTAGCCGCTGATCGCCTTTTCCAATTGGCTCCAGAGCAGTCTGGCTATTATGTCCTGTTATCAAACATTTATGCAAAAGCTGGTAGATGGCAAGATGTCACAACTGTGCGATCAATAATGAAGAGCAGAGGAATCAAGAAAATACCCGGTGTTAGCAATGTTGAGCTCAAAGATCAGGTTCACACTTTTCTTGCTGGTGACAGATCACATCCTGAGTCTAAAGAGATATATGAAGAATTAGATGTTTTGGTAGGGAAAATGAAGGAGTTAGGTTATGTTCCTGAGACTGATTCGGCTCTTCATGATGTCGAGGAGGAGGAGAAGGAATGCCATCTTGCAGTTCACAGTGAGAAGTTGGCAATTGTCTTTGCCATTCTGAATACAGACCCCGGGACGGCAATCAGAATTACCAAGAATCTTCGTGTTTGTGGAGATTGCCATATTGCTATTAAGCTCATCTCTAAAATAGCCGAACGGGAAATTGTTATCAGGGATACTAATCGGTTCCACCACTTCAAGGATGGTATGTGTTCTTGTGGAGATTATTGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DYW_deaminase PPR PPR_2

Protein Analysis

679

Amino Acids

75.74

Weight (kDa)

6.54

Isoelectric Point (pI)

39.32

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0017209)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G49142
fragaria_vesca FvH4_7g08230
malus_domestica MD07G1283100.v1.1
prunus_persica Prupe.2G305300_v2.0.a1
pyrus_communis pycom07g25720
rosa_laevigata RLG00000029048
rosa_multiflora Rmu_sc0002200.1_g000053
rosa_roxburghii Rroxscaffold_4G00311530
rosa_rugosa Rorug01G0161000.1
rosa_samantha Rh1AG176000 Rh1BG144100
rosa_wichuraiana Rw0G004940 Rw1G014650

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1140
Acc16I TGCGCA 1 cut(s) 642
Acc36I ACCTGC 1 cut(s) 1140
AccB1I GGYRCC 1 cut(s) 716
AccB7I CCANNNNNTGG 1 cut(s) 713
AccBSI CCGCTC 1 cut(s) 204
AccI GTMKAC 1 cut(s) 1461
AciI CCGC 6 cut(s) 25, 202, 252, 1062, 1244, 1491
AclI AACGTT 1 cut(s) 158
AclWI GGATC 1 cut(s) 960
AcsI RAATTY 6 cut(s) 288, 474, 511, 981, 1018, 1103
AcuI CTGAAG 1 cut(s) 738
AfaI GTAC 1 cut(s) 353
AfiI CCNNNNNNNGG 5 cut(s) 713, 736, 947, 1879, 2002
AflIII ACRYGT 1 cut(s) 1047
AgsI TTSAA 7 cut(s) 36, 163, 177, 697, 855, 1221, 2002
AjnI CCWGG 2 cut(s) 735, 859
AleI CACNNNNGTG 1 cut(s) 1589
Alw21I GWGCWC 2 cut(s) 1441, 1653
Alw26I GTCTC 5 cut(s) 203, 390, 1000, 1413, 1763
AlwI GGATC 1 cut(s) 960
AlwNI CAGNNNCTG 1 cut(s) 713
Ama87I CYCGRG 2 cut(s) 93, 1874
AoxI GGCC 3 cut(s) 499, 738, 1013
ApeKI GCWGC 4 cut(s) 86, 110, 245, 1251
ApoI RAATTY 6 cut(s) 288, 474, 511, 981, 1018, 1103
AspA2I CCTAGG 1 cut(s) 1322
AspLEI GCGC 2 cut(s) 485, 643
AspS9I GGNCC 2 cut(s) 97, 136
AsuC2I CCSGG 4 cut(s) 1457, 1632, 1875, 1876
AsuHPI GGTGA 3 cut(s) 875, 907, 1694
AsuNHI GCTAGC 1 cut(s) 725
AvaI CYCGRG 2 cut(s) 93, 1874
AvaII GGWCC 2 cut(s) 97, 136
AvrII CCTAGG 1 cut(s) 1322
BanI GGYRCC 1 cut(s) 716
BanII GRGCYC 1 cut(s) 1653
Bbv12I GWGCWC 2 cut(s) 1441, 1653
BbvI GCAGC 4 cut(s) 73, 122, 232, 1263
BccI CCATC 3 cut(s) 1566, 1824, 2000
BceAI ACGGC 3 cut(s) 540, 725, 1896
BcgI CGANNNNNNTGC 2 cut(s) 169, 203
BciT130I CCWGG 2 cut(s) 737, 861
BciVI GTATCC 1 cut(s) 1972
BclI TGATCA 2 cut(s) 324, 586
BcnI CCSGG 4 cut(s) 1457, 1632, 1875, 1876
BcoDI GTCTC 5 cut(s) 203, 390, 1000, 1413, 1763
BfaI CTAG 4 cut(s) 218, 726, 1323, 1487
BfoI RGCGCY 1 cut(s) 486
BfuAI ACCTGC 1 cut(s) 1140
BfuI GTATCC 1 cut(s) 1972
BglII AGATCT 1 cut(s) 1351
BisI GCNGC 6 cut(s) 87, 111, 246, 1245, 1252, 1491
BlnI CCTAGG 1 cut(s) 1322
BlsI GCNGC 6 cut(s) 88, 112, 247, 1246, 1253, 1492
Bme1390I CCNGG 6 cut(s) 737, 861, 1457, 1632, 1875, 1876
Bme18I GGWCC 2 cut(s) 97, 136
BmeT110I CYCGRG 2 cut(s) 93, 1874
BmgT120I GGNCC 2 cut(s) 97, 136
BmiI GGNNCC 6 cut(s) 98, 99, 718, 1416, 1515, 1991
BmrFI CCNGG 6 cut(s) 737, 861, 1457, 1632, 1875, 1876
BmtI GCTAGC 1 cut(s) 729
BpmI CTGGAG 2 cut(s) 1433, 1500
BpuEI CTTGAG 1 cut(s) 99
BpuMI CCSGG 4 cut(s) 1457, 1632, 1875, 1876
Bsa29I ATCGAT 1 cut(s) 68
BsaBI GATNNNNATC 1 cut(s) 1983
BsaJI CCNNGG 6 cut(s) 92, 720, 1302, 1322, 1873, 1874
Bsc4I CCNNNNNNNGG 5 cut(s) 713, 736, 947, 1879, 2002
Bse1I ACTGG 1 cut(s) 930
Bse3DI GCAATG 1 cut(s) 1648
Bse8I GATNNNNATC 1 cut(s) 1983
BseBI CCWGG 2 cut(s) 737, 861
BseCI ATCGAT 1 cut(s) 68
BseDI CCNNGG 6 cut(s) 92, 720, 1302, 1322, 1873, 1874
BseGI GGATG 5 cut(s) 1070, 1117, 1384, 1693, 2011
BseJI GATNNNNATC 1 cut(s) 1983
BseLI CCNNNNNNNGG 5 cut(s) 713, 736, 947, 1879, 2002
BseMI GCAATG 1 cut(s) 1648
BseMII CTCAG 4 cut(s) 285, 1215, 1689, 1758
BseNI ACTGG 1 cut(s) 930
BseRI GAGGAG 3 cut(s) 1811, 1814, 1817
BseXI GCAGC 4 cut(s) 73, 122, 232, 1263
BseYI CCCAGC 3 cut(s) 100, 632, 1367
BsgI GTGCAG 1 cut(s) 1330
BshFI GGCC 3 cut(s) 501, 740, 1015
BshNI GGYRCC 1 cut(s) 716
BshVI ATCGAT 1 cut(s) 68
BsiHKAI GWGCWC 2 cut(s) 1441, 1653
BsiHKCI CYCGRG 2 cut(s) 93, 1874
BsiSI CCGG 3 cut(s) 1456, 1632, 1875
BslFI GGGAC 2 cut(s) 110, 1891
BslI CCNNNNNNNGG 5 cut(s) 713, 736, 947, 1879, 2002
BsmAI GTCTC 5 cut(s) 203, 390, 1000, 1413, 1763
BsmBI CGTCTC 1 cut(s) 203
BsmFI GGGAC 2 cut(s) 110, 1891
BsmI GAATGC 3 cut(s) 692, 1039, 1817
BsnI GGCC 3 cut(s) 501, 740, 1015
BsoBI CYCGRG 2 cut(s) 93, 1874
Bsp1286I GDGCHC 2 cut(s) 1441, 1653
Bsp19I CCATGG 1 cut(s) 720
BspACI CCGC 6 cut(s) 25, 202, 252, 1062, 1244, 1491
BspANI GGCC 3 cut(s) 501, 740, 1015
BspCNI CTCAG 4 cut(s) 286, 1214, 1690, 1759
BspDI ATCGAT 1 cut(s) 68
BspHI TCATGA 5 cut(s) 231, 321, 985, 1165, 1786
BspLI GGNNCC 6 cut(s) 98, 99, 718, 1416, 1515, 1991
BspMI ACCTGC 1 cut(s) 1140
BspOI GCTAGC 1 cut(s) 729
BspPI GGATC 1 cut(s) 960
BspQI GCTCTTC 3 cut(s) 369, 1601, 1788
BspT107I GGYRCC 1 cut(s) 716
BsrBI CCGCTC 1 cut(s) 204
BsrDI GCAATG 1 cut(s) 1648
BsrI ACTGG 1 cut(s) 930
BssECI CCNNGG 6 cut(s) 92, 720, 1302, 1322, 1873, 1874
BssNAI GTATAC 1 cut(s) 1462
BssT1I CCWWGG 3 cut(s) 720, 1302, 1322
Bst1107I GTATAC 1 cut(s) 1462
Bst2UI CCWGG 2 cut(s) 737, 861
Bst4CI ACNGT 4 cut(s) 654, 888, 1591, 1832
Bst6I CTCTTC 4 cut(s) 369, 1266, 1601, 1788
BstC8I GCNNGC 7 cut(s) 250, 715, 727, 1249, 1342, 1365, 1453
BstDEI CTNAG 6 cut(s) 294, 1010, 1201, 1445, 1698, 1767
BstDSI CCRYGG 1 cut(s) 720
BstENI CCTNNNNNAGG 1 cut(s) 734
BstF5I GGATG 5 cut(s) 1070, 1117, 1384, 1693, 2011
BstH2I RGCGCY 1 cut(s) 486
BstHHI GCGC 2 cut(s) 485, 643
BstMAI GTCTC 5 cut(s) 203, 390, 1000, 1413, 1763
BstMWI GCNNNNNNNGC 4 cut(s) 86, 110, 245, 638
BstNI CCWGG 2 cut(s) 737, 861
BstNSI RCATGY 2 cut(s) 441, 1051
BstSCI CCNGG 6 cut(s) 735, 859, 1455, 1630, 1873, 1874
BstV1I GCAGC 4 cut(s) 73, 122, 232, 1263
BstX2I RGATCY 2 cut(s) 952, 1351
BstYI RGATCY 2 cut(s) 952, 1351
BstZ17I GTATAC 1 cut(s) 1462
Bsu15I ATCGAT 1 cut(s) 68
BsuI GTATCC 1 cut(s) 1972
BsuRI GGCC 3 cut(s) 501, 740, 1015
BsuTUI ATCGAT 1 cut(s) 68
BtgI CCRYGG 1 cut(s) 720
BtgZI GCGATG 1 cut(s) 1112
BtsCI GGATG 5 cut(s) 1070, 1117, 1384, 1693, 2011
BtsI GCAGTG 1 cut(s) 843
BtsIMutI CAGTG 3 cut(s) 843, 937, 1837
BveI ACCTGC 1 cut(s) 1140
Cac8I GCNNGC 7 cut(s) 250, 715, 727, 1249, 1342, 1365, 1453
CaiI CAGNNNCTG 1 cut(s) 713
CciI TCATGA 5 cut(s) 231, 321, 985, 1165, 1786
CfoI GCGC 2 cut(s) 485, 643
Cfr13I GGNCC 2 cut(s) 97, 136
Cfr9I CCCGGG 1 cut(s) 1874
ClaI ATCGAT 1 cut(s) 68
CseI GACGC 1 cut(s) 218
Csp6I GTAC 1 cut(s) 352
CviQI GTAC 1 cut(s) 352
DdeI CTNAG 6 cut(s) 294, 1010, 1201, 1445, 1698, 1767
Eam1104I CTCTTC 4 cut(s) 369, 1266, 1601, 1788
EarI CTCTTC 4 cut(s) 369, 1266, 1601, 1788
Ecl136II GAGCTC 1 cut(s) 1651
Eco130I CCWWGG 3 cut(s) 720, 1302, 1322
Eco24I GRGCYC 1 cut(s) 1653
Eco32I GATATC 1 cut(s) 151
Eco47I GGWCC 2 cut(s) 97, 136
Eco53kI GAGCTC 1 cut(s) 1651
Eco57I CTGAAG 1 cut(s) 738
Eco88I CYCGRG 2 cut(s) 93, 1874
EcoICRI GAGCTC 1 cut(s) 1651
EcoNI CCTNNNNNAGG 1 cut(s) 734
EcoO109I RGGNCCY 1 cut(s) 97
EcoRI GAATTC 2 cut(s) 288, 981
EcoRII CCWGG 2 cut(s) 735, 859
EcoRV GATATC 1 cut(s) 151
EcoT14I CCWWGG 3 cut(s) 720, 1302, 1322
EcoT22I ATGCAT 2 cut(s) 667, 1039
EcoT38I GRGCYC 1 cut(s) 1653
ErhI CCWWGG 3 cut(s) 720, 1302, 1322
Esp3I CGTCTC 1 cut(s) 203
FalI AAGNNNNNCTT 2 cut(s) 486, 518
FaqI GGGAC 2 cut(s) 110, 1891
FauI CCCGC 1 cut(s) 32
FauNDI CATATG 1 cut(s) 1144
FbaI TGATCA 2 cut(s) 324, 586
FblI GTMKAC 1 cut(s) 1461
Fnu4HI GCNGC 6 cut(s) 87, 111, 246, 1245, 1252, 1491
FokI GGATG 5 cut(s) 1077, 1124, 1391, 1680, 2018
FriOI GRGCYC 1 cut(s) 1653
Fsp4HI GCNGC 6 cut(s) 87, 111, 246, 1245, 1252, 1491
FspBI CTAG 4 cut(s) 218, 726, 1323, 1487
FspI TGCGCA 1 cut(s) 642
GlaI GCGC 2 cut(s) 484, 642
GluI GCNGC 6 cut(s) 87, 111, 246, 1245, 1252, 1491
GsaI CCCAGC 3 cut(s) 104, 636, 1371
GsuI CTGGAG 2 cut(s) 1433, 1500
HaeII RGCGCY 1 cut(s) 486
HaeIII GGCC 3 cut(s) 501, 740, 1015
HapII CCGG 3 cut(s) 1456, 1632, 1875
HgaI GACGC 1 cut(s) 218
HhaI GCGC 2 cut(s) 485, 643
Hin6I GCGC 2 cut(s) 483, 641
HinP1I GCGC 2 cut(s) 483, 641
HindIII AAGCTT 1 cut(s) 698
HinfI GANTC 8 cut(s) 264, 1199, 1210, 1217, 1617, 1700, 1775, 1900
HpaII CCGG 3 cut(s) 1456, 1632, 1875
HphI GGTGA 3 cut(s) 875, 907, 1694
Hpy166II GTNNAC 8 cut(s) 340, 373, 1070, 1125, 1157, 1462, 1666, 1828
Hpy8I GTNNAC 8 cut(s) 340, 373, 1070, 1125, 1157, 1462, 1666, 1828
HpyAV CCTTC 3 cut(s) 157, 1741, 1801
HpyCH4III ACNGT 4 cut(s) 654, 888, 1591, 1832
HpyCH4IV ACGT 2 cut(s) 158, 196
HpyF10VI GCNNNNNNNGC 4 cut(s) 86, 110, 245, 638
HpyF3I CTNAG 6 cut(s) 294, 1010, 1201, 1445, 1698, 1767
HpySE526I ACGT 2 cut(s) 158, 196
HspAI GCGC 2 cut(s) 483, 641
KflI GGGWCCC 1 cut(s) 97
Ksp22I TGATCA 2 cut(s) 324, 586
LguI GCTCTTC 3 cut(s) 369, 1601, 1788
LmnI GCTCC 4 cut(s) 330, 576, 1414, 1519
Lsp1109I GCAGC 4 cut(s) 73, 122, 232, 1263
MaeI CTAG 4 cut(s) 218, 726, 1323, 1487
MaeII ACGT 2 cut(s) 158, 196
MaeIII GTNAC 5 cut(s) 10, 742, 919, 1582, 1682
MbiI CCGCTC 1 cut(s) 204
MboII GAAGA 8 cut(s) 310, 356, 929, 1283, 1618, 1730, 1775, 1895
MfeI CAATTG 4 cut(s) 924, 1221, 1508, 1845
MflI RGATCY 2 cut(s) 952, 1351
MhlI GDGCHC 2 cut(s) 1441, 1653
MlyI GAGTC 3 cut(s) 1193, 1219, 1709
MmeI TCCRAC 2 cut(s) 870, 1459
MnlI CCTC 9 cut(s) 102, 682, 886, 1267, 1375, 1607, 1789, 1792, 1795
Mph1103I ATGCAT 2 cut(s) 667, 1039
MseI TTAA 7 cut(s) 315, 657, 702, 777, 801, 1290, 1935
MslI CAYNNNNRTG 2 cut(s) 990, 1589
MspA1I CMGCKG 2 cut(s) 758, 1493
MspI CCGG 3 cut(s) 1456, 1632, 1875
MspR9I CCNGG 6 cut(s) 737, 861, 1457, 1632, 1875, 1876
MunI CAATTG 4 cut(s) 924, 1221, 1508, 1845
Mva1269I GAATGC 3 cut(s) 692, 1039, 1817
MvaI CCWGG 2 cut(s) 737, 861
MwoI GCNNNNNNNGC 4 cut(s) 86, 110, 245, 638
NciI CCSGG 4 cut(s) 1457, 1632, 1875, 1876
NcoI CCATGG 1 cut(s) 720
NdeI CATATG 1 cut(s) 1144
NheI GCTAGC 1 cut(s) 725
NlaIV GGNNCC 6 cut(s) 98, 99, 718, 1416, 1515, 1991
NmuCI GTSAC 5 cut(s) 10, 742, 919, 1582, 1682
NsbI TGCGCA 1 cut(s) 642
NsiI ATGCAT 2 cut(s) 667, 1039
NspI RCATGY 2 cut(s) 441, 1051
OliI CACNNNNGTG 1 cut(s) 1589
PagI TCATGA 5 cut(s) 231, 321, 985, 1165, 1786
PaqCI CACCTGC 1 cut(s) 1140
PciI ACATGT 1 cut(s) 1047
PciSI GCTCTTC 3 cut(s) 369, 1601, 1788
PctI GAATGC 3 cut(s) 692, 1039, 1817
PfeI GAWTC 5 cut(s) 264, 1217, 1617, 1775, 1900
PflFI GACNNNGTC 1 cut(s) 1161
PflMI CCANNNNNTGG 1 cut(s) 713
PkrI GCNGC 6 cut(s) 88, 112, 247, 1246, 1253, 1492
PleI GAGTC 3 cut(s) 1193, 1218, 1708
PpsI GAGTC 3 cut(s) 1193, 1218, 1708
PpuMI RGGWCCY 1 cut(s) 97
PscI ACATGT 1 cut(s) 1047
Psp124BI GAGCTC 1 cut(s) 1653
Psp1406I AACGTT 1 cut(s) 158
Psp5II RGGWCCY 1 cut(s) 97
Psp6I CCWGG 2 cut(s) 735, 859
PspFI CCCAGC 3 cut(s) 100, 632, 1367
PspGI CCWGG 2 cut(s) 735, 859
PspN4I GGNNCC 6 cut(s) 98, 99, 718, 1416, 1515, 1991
PspPI GGNCC 2 cut(s) 97, 136
PspPPI RGGWCCY 1 cut(s) 97
PstNI CAGNNNCTG 1 cut(s) 713
PsuI RGATCY 2 cut(s) 952, 1351
PsyI GACNNNGTC 1 cut(s) 1161
PvuII CAGCTG 1 cut(s) 758
RsaI GTAC 1 cut(s) 353
RsaNI GTAC 1 cut(s) 352
RseI CAYNNNNRTG 2 cut(s) 990, 1589
SacI GAGCTC 1 cut(s) 1653
SapI GCTCTTC 3 cut(s) 369, 1601, 1788
SaqAI TTAA 7 cut(s) 315, 657, 702, 777, 801, 1290, 1935
SatI GCNGC 6 cut(s) 87, 111, 246, 1245, 1252, 1491
Sau96I GGNCC 2 cut(s) 97, 136
SchI GAGTC 3 cut(s) 1193, 1219, 1709
ScrFI CCNGG 6 cut(s) 737, 861, 1457, 1632, 1875, 1876
SduI GDGCHC 2 cut(s) 1441, 1653
SinI GGWCC 2 cut(s) 97, 136
SmaI CCCGGG 1 cut(s) 1876
SmiMI CAYNNNNRTG 2 cut(s) 990, 1589
SmlI CTYRAG 1 cut(s) 114
SmoI CTYRAG 1 cut(s) 114
SsiI CCGC 6 cut(s) 25, 202, 252, 1062, 1244, 1491
SspI AATATT 1 cut(s) 132
SspMI CTAG 4 cut(s) 218, 726, 1323, 1487
SstI GAGCTC 1 cut(s) 1653
StyD4I CCNGG 6 cut(s) 735, 859, 1455, 1630, 1873, 1874
StyI CCWWGG 3 cut(s) 720, 1302, 1322
TaaI ACNGT 4 cut(s) 654, 888, 1591, 1832
TaiI ACGT 2 cut(s) 161, 199
TaqI TCGA 4 cut(s) 68, 189, 282, 1794
TauI GCSGC 2 cut(s) 1247, 1493
TfiI GAWTC 5 cut(s) 264, 1217, 1617, 1775, 1900
Tru1I TTAA 7 cut(s) 315, 657, 702, 777, 801, 1290, 1935
Tru9I TTAA 7 cut(s) 315, 657, 702, 777, 801, 1290, 1935
TscAI CASTG 3 cut(s) 843, 937, 1837
TseFI GTSAC 5 cut(s) 10, 742, 919, 1582, 1682
TseI GCWGC 4 cut(s) 86, 110, 245, 1251
Tsp45I GTSAC 5 cut(s) 10, 742, 919, 1582, 1682
TspMI CCCGGG 1 cut(s) 1874
TspRI CASTG 3 cut(s) 843, 937, 1837
Tth111I GACNNNGTC 1 cut(s) 1161
Van91I CCANNNNNTGG 1 cut(s) 713
VpaK11BI GGWCC 2 cut(s) 97, 136
XagI CCTNNNNNAGG 1 cut(s) 734
XapI RAATTY 6 cut(s) 288, 474, 511, 981, 1018, 1103
XceI RCATGY 2 cut(s) 441, 1051
XcmI CCANNNNNNNNNTGG 1 cut(s) 2003
XmaI CCCGGG 1 cut(s) 1874
XmaJI CCTAGG 1 cut(s) 1322
XmiI GTMKAC 1 cut(s) 1461
XspI CTAG 4 cut(s) 218, 726, 1323, 1487
Zsp2I ATGCAT 2 cut(s) 667, 1039
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.