RLG00000029048

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
OG0017209
Physical Location & Seq
Forward (+)
31982825 .. 31984852
2028 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000029048

Sequence Viewer

Length: 1935 bp
ATGAAAGCCATTACTCCCCTTTTTCGCCGTTTTTCGAAAGCCAAAGAATCACAAGCTTTGATATCATTAATTGGATGTTCCACTCAAGACCCAACTCTTGCAAAACAAGTATTTGGTAAATTATTGGATCAATACCCAGGTAGCATTACATTGAGGAAACTCTATGCAAGCTTTATTGTCAATGAGAATCTCCACGGCGACGCTTCACTAGGTGTCAAGTTCATGAGAGCTTATGCTGCTTGCGGTGAACCTAGAATGGCACGCTGTATATTCGATCGAATTCATGATAAGAATGTCATCTTTTGTAATGTCATGATCAGAAGCTATGTGAATAACCGTTTCTACCATGATGCTCTTGTTTTGTACAAAACAATGTCTGCCATTGGGTTTGATCCTGATAACTATACGTACCCTTGTGTCCTCAAGGCTTGTTCTGCGTCGGATAATTTGTGGGTGGGATTGCAAATTCATGTTGCTGTGGTGAAAGTTGGGCTTGATCGGAATTTGTTTATTGGGAATGGTCTGATTGCCATGTATGGGAAATGCGGTTGTTTGGTGGAGGCTCGGCACGTTTTTGATGAGATGCCATGTAGAGATGTGGTTTCGTGTAATTCTATGGTAGCTGGGTATGCACAAAATGAACGGTTCAATGATGCACTAGATGTTTGTAGAAAAATGAAGACATTGGGGCTTAAACCAGATGCTGGTACCATGGCTAGCCTATTCCCAGCTGTGACCAACACTTCATCTGAGAATGTTTCGTATGTTAAGGAAATGTTTACGAAATTGGATAAACAGAGTTTGGTTTCATGGAATGTGATGATAGCAGTGTATGTGAATAATTCGATGCCTGGTGAAGCAGTTGACCTTTTCTTACAGATGGAGGAAAGTGGAATAGAGCCTGATGCAGTCACAATTGCAAGTGTTCTCCCCGCTTGTGGGGATCTTTCTGCTTTGTTGCTAGGGAGGCGGATTCATAAATATGTTGAGAGAAAGAGACTTGGGCCAAATTTGTTATTGGAGAATGCATTGATCGACATGTATGCTAAGTGTGGATGTTTACGAGATGCAAGAGAAGTCTTTGATGCGATGACATTTCAGGATGTTGTCTCGTGGACTTCCATGATGTCTGCATATGGTAGGAGTGGACAAGGTCATGACGCTGTGGCACTTTTTGTGAAAATGCGTGACTCAGGTGTAGTTCCTGATTCAATTGCATTTGTATCAGTTCTCGCGGCTTGCAGCCATGCGGGATTGTTGGAGGAAGGACAATATTACTTTAAATTGATGACTGAGGAGTACGGCATTGATCCTAGGATAGAGCACTGTGCTTGTTTTGTAGATCTGTTGGGGCGTGCTGGAAGAGTGGATGAGGCTTATAGTTTTGTCAAACAGATGCCACTGGAGCCTAATGAAAGAGTATGGGGTGCTCTACTTAGTGCTTGCCGGGTATACTCTAACATGAGTGTAGGACTTTTAGTCGCTGATCGCCTTTTTCAATTGGCTCCAGAGGAATCGGGTTATTATGTTTTGTTATCAAACATCTATGCAAAAGCTGGTAAATGGCAAGATGTCACCGCAGTCCGATCACATCCTCAGTCTAAAGTGATATATGAAGAATTAGATATATTGGTTGGGAAAATGAAGGAGTTAGGTTATGTCCCTGAGACCGATTCTGCTCTTCATGACGTGGAGGAGGAGGAGAAGGAATGTCATCTTGCAGTTCACAGTGAGAAGCTGGCAATTGTGTTTGCCATTCTGAATACTGAGCGAGAGGCAGTGATCAGAATTACCAAAAATCTTCGTGTTTGTAGTGATTGCCATATTGCTGCTAAGCTAATCTCTAAAATAGCTGAACGTGAAATTGTTGTCAGGGATACTAATCGTTTCCACCATTTTAAGGATGGCACATGTTCTTGTGGGGACTATTGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DYW_deaminase PPR PPR_2

Protein Analysis

645

Amino Acids

71.88

Weight (kDa)

6.18

Isoelectric Point (pI)

42.96

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 97 - 144 2.3e-08 PPR repeat family
PPR_2 PF13041 198 - 243 1.5e-08 PPR repeat family
PPR_2 PF13041 268 - 313 8.1e-10 PPR repeat family
PPR PF01535 269 - 299 5.7e-07 PPR repeat
PPR_2 PF13041 368 - 415 5.6e-10 PPR repeat family
PPR PF01535 370 - 400 1.1e-07 PPR repeat
E_motif PF20431 485 - 531 4.5e-10 E motif
DYW_deaminase PF14432 552 - 644 2.8e-42 DYW family of nucleic acid deaminases
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0017209)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G49142
fragaria_vesca FvH4_7g08230
malus_domestica MD07G1283100.v1.1
prunus_persica Prupe.2G305300_v2.0.a1
pyrus_communis pycom07g25720
rosa_laevigata RLG00000029048
rosa_multiflora Rmu_sc0002200.1_g000053
rosa_roxburghii Rroxscaffold_4G00311530
rosa_rugosa Rorug01G0161000.1
rosa_samantha Rh1AG176000 Rh1BG144100
rosa_wichuraiana Rw0G004940 Rw1G014650

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 707
AccB1I GGYRCC 1 cut(s) 707
AccB7I CCANNNNNTGG 1 cut(s) 704
AccI GTMKAC 1 cut(s) 1452
AccII CGCG 1 cut(s) 1235
AciI CCGC 7 cut(s) 243, 546, 933, 970, 1235, 1250, 1578
AclWI GGATC 4 cut(s) 135, 386, 951, 1304
AcsI RAATTY 4 cut(s) 279, 465, 502, 1009
AdeI CACNNNGTG 1 cut(s) 212
AfaI GTAC 4 cut(s) 365, 410, 709, 1301
AfiI CCNNNNNNNGG 5 cut(s) 537, 704, 938, 939, 1900
AflIII ACRYGT 2 cut(s) 1038, 1910
AgsI TTSAA 3 cut(s) 649, 1212, 1499
AhdI GACNNNNNGTC 1 cut(s) 1478
AjiI CACGTC 1 cut(s) 1690
AjnI CCWGG 2 cut(s) 136, 850
Alw21I GWGCWC 2 cut(s) 1326, 1432
Alw26I GTCTC 3 cut(s) 991, 1114, 1661
AlwI GGATC 4 cut(s) 135, 386, 951, 1304
AlwNI CAGNNNCTG 1 cut(s) 704
AoxI GGCC 1 cut(s) 1004
ApeKI GCWGC 3 cut(s) 236, 1242, 1829
ApoI RAATTY 4 cut(s) 279, 465, 502, 1009
AseI ATTAAT 1 cut(s) 68
Asp718I GGTACC 1 cut(s) 707
AspA2I CCTAGG 1 cut(s) 1313
AspS9I GGNCC 1 cut(s) 1004
AsuC2I CCSGG 1 cut(s) 1448
AsuHPI GGTGA 4 cut(s) 257, 493, 866, 1567
AsuII TTCGAA 1 cut(s) 35
AsuNHI GCTAGC 1 cut(s) 716
AvrII CCTAGG 1 cut(s) 1313
BanI GGYRCC 1 cut(s) 707
BauI CACGAG 1 cut(s) 1111
BbsI GAAGAC 1 cut(s) 686
Bbv12I GWGCWC 2 cut(s) 1326, 1432
BbvI GCAGC 3 cut(s) 223, 1254, 1816
BccI CCATC 2 cut(s) 874, 1898
BceAI ACGGC 3 cut(s) 12, 211, 1318
BcgI CGANNNNNNTGC 2 cut(s) 1025, 1059
BciT130I CCWGG 2 cut(s) 138, 852
BciVI GTATCC 1 cut(s) 1870
BclI TGATCA 2 cut(s) 315, 1782
BcnI CCSGG 1 cut(s) 1448
BcoDI GTCTC 3 cut(s) 991, 1114, 1661
BfaI CTAG 6 cut(s) 209, 252, 659, 717, 962, 1314
BfuI GTATCC 1 cut(s) 1870
BglII AGATCT 1 cut(s) 1342
BisI GCNGC 4 cut(s) 237, 1236, 1243, 1830
BlnI CCTAGG 1 cut(s) 1313
BlpI GCTNAGC 1 cut(s) 1833
BlsI GCNGC 4 cut(s) 238, 1237, 1244, 1831
Bme1390I CCNGG 3 cut(s) 138, 852, 1448
BmeRI GACNNNNNGTC 1 cut(s) 1478
BmgBI CACGTC 1 cut(s) 1690
BmgT120I GGNCC 1 cut(s) 1004
BmiI GGNNCC 3 cut(s) 709, 1407, 1506
BmrFI CCNGG 3 cut(s) 138, 852, 1448
BmsI GCATC 9 cut(s) 340, 573, 643, 691, 837, 895, 1057, 1075, 1386
BmtI GCTAGC 1 cut(s) 720
BpiI GAAGAC 1 cut(s) 686
BpmI CTGGAG 2 cut(s) 1424, 1491
Bpu1102I GCTNAGC 1 cut(s) 1833
Bpu14I TTCGAA 1 cut(s) 35
BpuEI CTTGAG 2 cut(s) 69, 407
BpuMI CCSGG 1 cut(s) 1448
BsaAI YACGTR 1 cut(s) 408
BsaBI GATNNNNATC 1 cut(s) 1881
BsaI GGTCTC 1 cut(s) 1661
BsaJI CCNNGG 4 cut(s) 136, 193, 711, 1313
Bsc4I CCNNNNNNNGG 5 cut(s) 537, 704, 938, 939, 1900
Bse1I ACTGG 1 cut(s) 1407
Bse8I GATNNNNATC 1 cut(s) 1881
BseBI CCWGG 2 cut(s) 138, 852
BseDI CCNNGG 4 cut(s) 136, 193, 711, 1313
BseGI GGATG 6 cut(s) 80, 1061, 1108, 1375, 1591, 1909
BseJI GATNNNNATC 1 cut(s) 1881
BseLI CCNNNNNNNGG 5 cut(s) 537, 704, 938, 939, 1900
BseMII CTCAG 6 cut(s) 741, 1206, 1284, 1610, 1656, 1758
BseNI ACTGG 1 cut(s) 1407
BseRI GAGGAG 4 cut(s) 1310, 1709, 1712, 1715
BseXI GCAGC 3 cut(s) 223, 1254, 1816
BseYI CCCAGC 2 cut(s) 623, 727
Bsh1236I CGCG 1 cut(s) 1235
Bsh1285I CGRYCG 1 cut(s) 277
BshFI GGCC 1 cut(s) 1006
BshNI GGYRCC 1 cut(s) 707
BsiEI CGRYCG 1 cut(s) 277
BsiHKAI GWGCWC 2 cut(s) 1326, 1432
BsiSI CCGG 1 cut(s) 1447
BslFI GGGAC 1 cut(s) 1646
BslI CCNNNNNNNGG 5 cut(s) 537, 704, 938, 939, 1900
BsmAI GTCTC 3 cut(s) 991, 1114, 1661
BsmFI GGGAC 1 cut(s) 1646
BsmI GAATGC 1 cut(s) 1030
BsnI GGCC 1 cut(s) 1006
Bso31I GGTCTC 1 cut(s) 1661
Bsp119I TTCGAA 1 cut(s) 35
Bsp1286I GDGCHC 2 cut(s) 1326, 1432
Bsp1407I TGTACA 1 cut(s) 363
Bsp1720I GCTNAGC 1 cut(s) 1833
Bsp19I CCATGG 1 cut(s) 711
BspACI CCGC 7 cut(s) 243, 546, 933, 970, 1235, 1250, 1578
BspANI GGCC 1 cut(s) 1006
BspCNI CTCAG 6 cut(s) 742, 1205, 1285, 1609, 1657, 1759
BspFNI CGCG 1 cut(s) 1235
BspHI TCATGA 5 cut(s) 222, 283, 312, 1156, 1684
BspLI GGNNCC 3 cut(s) 709, 1407, 1506
BspOI GCTAGC 1 cut(s) 720
BspPI GGATC 4 cut(s) 135, 386, 951, 1304
BspQI GCTCTTC 1 cut(s) 1686
BspT104I TTCGAA 1 cut(s) 35
BspT107I GGYRCC 1 cut(s) 707
BspTNI GGTCTC 1 cut(s) 1661
BsrGI TGTACA 1 cut(s) 363
BsrI ACTGG 1 cut(s) 1407
BssECI CCNNGG 4 cut(s) 136, 193, 711, 1313
BssNAI GTATAC 1 cut(s) 1453
BssSI CACGAG 1 cut(s) 1111
BssT1I CCWWGG 2 cut(s) 711, 1313
Bst1107I GTATAC 1 cut(s) 1453
Bst2BI CACGAG 1 cut(s) 1111
Bst2UI CCWGG 2 cut(s) 138, 852
Bst4CI ACNGT 4 cut(s) 338, 645, 1328, 1730
Bst6I CTCTTC 2 cut(s) 1357, 1686
BstAUI TGTACA 1 cut(s) 363
BstBAI YACGTR 1 cut(s) 408
BstBI TTCGAA 1 cut(s) 35
BstC8I GCNNGC 8 cut(s) 169, 241, 262, 718, 1240, 1356, 1444, 1740
BstDEI CTNAG 9 cut(s) 750, 1047, 1192, 1293, 1436, 1596, 1665, 1767, 1833
BstDSI CCRYGG 2 cut(s) 193, 711
BstF5I GGATG 6 cut(s) 80, 1061, 1108, 1375, 1591, 1909
BstFNI CGCG 1 cut(s) 1235
BstMAI GTCTC 3 cut(s) 991, 1114, 1661
BstMCI CGRYCG 1 cut(s) 277
BstMWI GCNNNNNNNGC 5 cut(s) 236, 434, 629, 967, 1405
BstNI CCWGG 2 cut(s) 138, 852
BstNSI RCATGY 2 cut(s) 1042, 1914
BstSCI CCNGG 3 cut(s) 136, 850, 1446
BstSNI TACGTA 1 cut(s) 408
BstUI CGCG 1 cut(s) 1235
BstV1I GCAGC 3 cut(s) 223, 1254, 1816
BstV2I GAAGAC 1 cut(s) 686
BstX2I RGATCY 2 cut(s) 943, 1342
BstYI RGATCY 2 cut(s) 943, 1342
BstZ17I GTATAC 1 cut(s) 1453
BsuI GTATCC 1 cut(s) 1870
BsuRI GGCC 1 cut(s) 1006
BtgI CCRYGG 2 cut(s) 193, 711
BtgZI GCGATG 1 cut(s) 1103
BtrI CACGTC 1 cut(s) 1690
BtsCI GGATG 6 cut(s) 80, 1061, 1108, 1375, 1591, 1909
BtsI GCAGTG 2 cut(s) 834, 1785
BtsIMutI CAGTG 5 cut(s) 834, 1324, 1400, 1735, 1785
Cac8I GCNNGC 8 cut(s) 169, 241, 262, 718, 1240, 1356, 1444, 1740
CaiI CAGNNNCTG 1 cut(s) 704
CciI TCATGA 5 cut(s) 222, 283, 312, 1156, 1684
Cfr13I GGNCC 1 cut(s) 1004
CseI GACGC 3 cut(s) 209, 426, 1169
Csp6I GTAC 4 cut(s) 364, 409, 708, 1300
CviQI GTAC 4 cut(s) 364, 409, 708, 1300
DdeI CTNAG 9 cut(s) 750, 1047, 1192, 1293, 1436, 1596, 1665, 1767, 1833
DraI TTTAAA 1 cut(s) 1282
DraIII CACNNNGTG 1 cut(s) 212
DriI GACNNNNNGTC 1 cut(s) 1478
Eam1104I CTCTTC 2 cut(s) 1357, 1686
Eam1105I GACNNNNNGTC 1 cut(s) 1478
EarI CTCTTC 2 cut(s) 1357, 1686
EciI GGCGGA 1 cut(s) 985
Eco105I TACGTA 1 cut(s) 408
Eco130I CCWWGG 2 cut(s) 711, 1313
Eco31I GGTCTC 1 cut(s) 1661
Eco32I GATATC 1 cut(s) 63
EcoRI GAATTC 1 cut(s) 279
EcoRII CCWGG 2 cut(s) 136, 850
EcoRV GATATC 1 cut(s) 63
EcoT14I CCWWGG 2 cut(s) 711, 1313
EcoT22I ATGCAT 1 cut(s) 1030
ErhI CCWWGG 2 cut(s) 711, 1313
FalI AAGNNNNNCTT 2 cut(s) 477, 509
FaqI GGGAC 1 cut(s) 1646
FauI CCCGC 2 cut(s) 940, 1243
FauNDI CATATG 1 cut(s) 1135
FbaI TGATCA 2 cut(s) 315, 1782
FblI GTMKAC 1 cut(s) 1452
Fnu4HI GCNGC 4 cut(s) 237, 1236, 1243, 1830
FokI GGATG 6 cut(s) 87, 1068, 1115, 1382, 1578, 1916
Fsp4HI GCNGC 4 cut(s) 237, 1236, 1243, 1830
FspBI CTAG 6 cut(s) 209, 252, 659, 717, 962, 1314
GluI GCNGC 4 cut(s) 237, 1236, 1243, 1830
GsaI CCCAGC 2 cut(s) 627, 731
GsuI CTGGAG 2 cut(s) 1424, 1491
HaeIII GGCC 1 cut(s) 1006
HapII CCGG 1 cut(s) 1447
HgaI GACGC 3 cut(s) 209, 426, 1169
HincII GTYRAC 1 cut(s) 865
HindII GTYRAC 1 cut(s) 865
HindIII AAGCTT 2 cut(s) 54, 169
HinfI GANTC 7 cut(s) 47, 187, 973, 1190, 1208, 1514, 1673
HpaII CCGG 1 cut(s) 1447
HphI GGTGA 4 cut(s) 257, 493, 866, 1567
Hpy166II GTNNAC 8 cut(s) 248, 780, 865, 1061, 1116, 1148, 1453, 1726
Hpy188I TCNGA 8 cut(s) 320, 442, 501, 525, 751, 1586, 1761, 1787
Hpy8I GTNNAC 8 cut(s) 248, 780, 865, 1061, 1116, 1148, 1453, 1726
Hpy99I CGWCG 2 cut(s) 203, 442
HpyAV CCTTC 3 cut(s) 1259, 1639, 1699
HpyCH4III ACNGT 4 cut(s) 338, 645, 1328, 1730
HpyCH4IV ACGT 4 cut(s) 407, 570, 1689, 1858
HpyF10VI GCNNNNNNNGC 5 cut(s) 236, 434, 629, 967, 1405
HpyF3I CTNAG 9 cut(s) 750, 1047, 1192, 1293, 1436, 1596, 1665, 1767, 1833
HpySE526I ACGT 4 cut(s) 407, 570, 1689, 1858
KpnI GGTACC 1 cut(s) 711
Ksp22I TGATCA 2 cut(s) 315, 1782
LguI GCTCTTC 1 cut(s) 1686
LmnI GCTCC 2 cut(s) 1405, 1510
Lsp1109I GCAGC 3 cut(s) 223, 1254, 1816
LweI GCATC 9 cut(s) 340, 573, 643, 691, 837, 895, 1057, 1075, 1386
MaeI CTAG 6 cut(s) 209, 252, 659, 717, 962, 1314
MaeII ACGT 4 cut(s) 407, 570, 1689, 1858
MaeIII GTNAC 4 cut(s) 733, 910, 1187, 1573
MboII GAAGA 5 cut(s) 691, 1374, 1628, 1673, 1793
MfeI CAATTG 4 cut(s) 915, 1212, 1499, 1743
MflI RGATCY 2 cut(s) 943, 1342
MhlI GDGCHC 2 cut(s) 1326, 1432
MlyI GAGTC 1 cut(s) 1184
MmeI TCCRAC 2 cut(s) 420, 1239
Mph1103I ATGCAT 1 cut(s) 1030
MseI TTAA 5 cut(s) 68, 693, 768, 1281, 1899
MslI CAYNNNNRTG 1 cut(s) 981
MspA1I CMGCKG 1 cut(s) 731
MspI CCGG 1 cut(s) 1447
MspR9I CCNGG 3 cut(s) 138, 852, 1448
MunI CAATTG 4 cut(s) 915, 1212, 1499, 1743
Mva1269I GAATGC 1 cut(s) 1030
MvaI CCWGG 2 cut(s) 138, 852
MvnI CGCG 1 cut(s) 1235
MwoI GCNNNNNNNGC 5 cut(s) 236, 434, 629, 967, 1405
NciI CCSGG 1 cut(s) 1448
NcoI CCATGG 1 cut(s) 711
NdeI CATATG 1 cut(s) 1135
NheI GCTAGC 1 cut(s) 716
NlaIV GGNNCC 3 cut(s) 709, 1407, 1506
NmeAIII GCCGAG 1 cut(s) 544
NmuCI GTSAC 4 cut(s) 733, 910, 1187, 1573
NsiI ATGCAT 1 cut(s) 1030
NspI RCATGY 2 cut(s) 1042, 1914
NspV TTCGAA 1 cut(s) 35
PagI TCATGA 5 cut(s) 222, 283, 312, 1156, 1684
PciI ACATGT 2 cut(s) 1038, 1910
PciSI GCTCTTC 1 cut(s) 1686
PctI GAATGC 1 cut(s) 1030
PfeI GAWTC 6 cut(s) 47, 187, 973, 1208, 1514, 1673
PflFI GACNNNGTC 1 cut(s) 1152
PflMI CCANNNNNTGG 1 cut(s) 704
PkrI GCNGC 4 cut(s) 238, 1237, 1244, 1831
Ple19I CGATCG 1 cut(s) 277
PleI GAGTC 1 cut(s) 1184
PpsI GAGTC 1 cut(s) 1184
Ppu21I YACGTR 1 cut(s) 408
PscI ACATGT 2 cut(s) 1038, 1910
PshBI ATTAAT 1 cut(s) 68
Psp6I CCWGG 2 cut(s) 136, 850
PspFI CCCAGC 2 cut(s) 623, 727
PspGI CCWGG 2 cut(s) 136, 850
PspN4I GGNNCC 3 cut(s) 709, 1407, 1506
PspPI GGNCC 1 cut(s) 1004
PstNI CAGNNNCTG 1 cut(s) 704
PsuI RGATCY 2 cut(s) 943, 1342
PsyI GACNNNGTC 1 cut(s) 1152
PvuI CGATCG 1 cut(s) 277
PvuII CAGCTG 1 cut(s) 731
RsaI GTAC 4 cut(s) 365, 410, 709, 1301
RsaNI GTAC 4 cut(s) 364, 409, 708, 1300
RseI CAYNNNNRTG 1 cut(s) 981
SapI GCTCTTC 1 cut(s) 1686
SaqAI TTAA 5 cut(s) 68, 693, 768, 1281, 1899
SatI GCNGC 4 cut(s) 237, 1236, 1243, 1830
Sau96I GGNCC 1 cut(s) 1004
SchI GAGTC 1 cut(s) 1184
ScrFI CCNGG 3 cut(s) 138, 852, 1448
SduI GDGCHC 2 cut(s) 1326, 1432
SfaNI GCATC 9 cut(s) 340, 573, 643, 691, 837, 895, 1057, 1075, 1386
SfuI TTCGAA 1 cut(s) 35
SmiMI CAYNNNNRTG 1 cut(s) 981
SmlI CTYRAG 2 cut(s) 84, 422
SmoI CTYRAG 2 cut(s) 84, 422
SnaBI TACGTA 1 cut(s) 408
SsiI CCGC 7 cut(s) 243, 546, 933, 970, 1235, 1250, 1578
SspI AATATT 1 cut(s) 1274
SspMI CTAG 6 cut(s) 209, 252, 659, 717, 962, 1314
StyD4I CCNGG 3 cut(s) 136, 850, 1446
StyI CCWWGG 2 cut(s) 711, 1313
TaaI ACNGT 4 cut(s) 338, 645, 1328, 1730
TaiI ACGT 4 cut(s) 410, 573, 1692, 1861
TaqI TCGA 5 cut(s) 35, 273, 277, 845, 1035
TaqII GACCGA 1 cut(s) 1685
TatI WGTACW 1 cut(s) 363
TauI GCSGC 1 cut(s) 1238
TfiI GAWTC 6 cut(s) 47, 187, 973, 1208, 1514, 1673
Tru1I TTAA 5 cut(s) 68, 693, 768, 1281, 1899
Tru9I TTAA 5 cut(s) 68, 693, 768, 1281, 1899
TscAI CASTG 5 cut(s) 834, 1331, 1407, 1735, 1785
TseFI GTSAC 4 cut(s) 733, 910, 1187, 1573
TseI GCWGC 3 cut(s) 236, 1242, 1829
Tsp45I GTSAC 4 cut(s) 733, 910, 1187, 1573
TspRI CASTG 5 cut(s) 834, 1331, 1407, 1735, 1785
Tth111I GACNNNGTC 1 cut(s) 1152
Van91I CCANNNNNTGG 1 cut(s) 704
VspI ATTAAT 1 cut(s) 68
XapI RAATTY 4 cut(s) 279, 465, 502, 1009
XceI RCATGY 2 cut(s) 1042, 1914
XcmI CCANNNNNNNNNTGG 1 cut(s) 1901
XmaJI CCTAGG 1 cut(s) 1313
XmiI GTMKAC 1 cut(s) 1452
XspI CTAG 6 cut(s) 209, 252, 659, 717, 962, 1314
Zsp2I ATGCAT 1 cut(s) 1030
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.