RESISTANCE protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 19 - 185 | 1.6e-39 | TIR domain |
| TIR_2 | PF13676 | 21 - 147 | 5.1e-11 | TIR domain |
| NB-ARC | PF00931 | 213 - 382 | 8.9e-14 | NB-ARC domain |
| WHD_ROQ1 | PF23282 | 455 - 518 | 1.1e-07 | Disease resistance protein Roq1-like, winged-helix domain |
| C-JID | PF20160 | 964 - 1090 | 6.3e-08 | C-JID domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 398 |
| AccB1I | GGYRCC | 1 cut(s) | 1593 |
| AccI | GTMKAC | 2 cut(s) | 1426, 1896 |
| AccII | CGCG | 1 cut(s) | 2261 |
| AccIII | TCCGGA | 2 cut(s) | 2080, 2278 |
| AciI | CCGC | 6 cut(s) | 47, 50, 91, 763, 1883, 3525 |
| AclWI | GGATC | 5 cut(s) | 224, 467, 3101, 3240, 3469 |
| AcoI | YGGCCR | 1 cut(s) | 225 |
| AcuI | CTGAAG | 4 cut(s) | 453, 1461, 2288, 2773 |
| AcvI | CACGTG | 1 cut(s) | 3590 |
| AfaI | GTAC | 3 cut(s) | 245, 2062, 3310 |
| AfeI | AGCGCT | 2 cut(s) | 534, 2762 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 722, 1858 |
| AflII | CTTAAG | 6 cut(s) | 775, 1901, 2135, 2449, 2603, 3349 |
| AflIII | ACRYGT | 2 cut(s) | 184, 3494 |
| AjnI | CCWGG | 1 cut(s) | 2893 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 554, 586, 1268, 1300 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 2861, 2893 |
| Alw21I | GWGCWC | 5 cut(s) | 446, 495, 822, 2952, 3339 |
| Alw26I | GTCTC | 8 cut(s) | 680, 1730, 2072, 2079, 2101, 2224, 2291, 2617 |
| AlwI | GGATC | 5 cut(s) | 224, 467, 3101, 3240, 3469 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 2124 |
| Aor13HI | TCCGGA | 2 cut(s) | 2080, 2278 |
| Aor51HI | AGCGCT | 2 cut(s) | 534, 2762 |
| AoxI | GGCC | 3 cut(s) | 9, 225, 3279 |
| ApeKI | GCWGC | 4 cut(s) | 52, 1445, 2763, 3228 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 679, 711, 2719, 2751 |
| AseI | ATTAAT | 2 cut(s) | 788, 1485 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1475 |
| AspLEI | GCGC | 5 cut(s) | 399, 535, 1640, 2261, 2763 |
| AspS9I | GGNCC | 3 cut(s) | 1267, 1498, 2936 |
| AsuC2I | CCSGG | 2 cut(s) | 717, 2147 |
| AsuHPI | GGTGA | 3 cut(s) | 2161, 3514, 3574 |
| AsuII | TTCGAA | 1 cut(s) | 584 |
| AvaII | GGWCC | 3 cut(s) | 1267, 1498, 2936 |
| BalI | TGGCCA | 1 cut(s) | 227 |
| BanI | GGYRCC | 1 cut(s) | 1593 |
| BanII | GRGCYC | 2 cut(s) | 446, 2952 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 21, 53 |
| BauI | CACGAG | 1 cut(s) | 620 |
| BbrPI | CACGTG | 1 cut(s) | 3590 |
| Bbv12I | GWGCWC | 5 cut(s) | 446, 495, 822, 2952, 3339 |
| BbvCI | CCTCAGC | 2 cut(s) | 1761, 2117 |
| BbvI | GCAGC | 4 cut(s) | 64, 1432, 2750, 3240 |
| BccI | CCATC | 8 cut(s) | 117, 470, 913, 1562, 1793, 2177, 3114, 3299 |
| BceAI | ACGGC | 3 cut(s) | 1126, 2605, 2655 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 2668, 2678, 2702, 2712 |
| BciT130I | CCWGG | 1 cut(s) | 2895 |
| BciVI | GTATCC | 2 cut(s) | 1948, 2389 |
| BclI | TGATCA | 1 cut(s) | 2461 |
| BcnI | CCSGG | 2 cut(s) | 717, 2147 |
| BcoDI | GTCTC | 8 cut(s) | 680, 1730, 2072, 2079, 2101, 2224, 2291, 2617 |
| BfaI | CTAG | 9 cut(s) | 275, 668, 1295, 1422, 1536, 1844, 2165, 3071, 3258 |
| BfmI | CTRYAG | 1 cut(s) | 1744 |
| BfoI | RGCGCY | 2 cut(s) | 536, 2764 |
| BfrI | CTTAAG | 6 cut(s) | 775, 1901, 2135, 2449, 2603, 3349 |
| BfuI | GTATCC | 2 cut(s) | 1948, 2389 |
| BglII | AGATCT | 4 cut(s) | 670, 1246, 1740, 3195 |
| BisI | GCNGC | 6 cut(s) | 47, 50, 53, 1446, 2764, 3229 |
| BlpI | GCTNAGC | 1 cut(s) | 536 |
| BlsI | GCNGC | 6 cut(s) | 48, 51, 54, 1447, 2765, 3230 |
| Bme1390I | CCNGG | 3 cut(s) | 717, 2147, 2895 |
| Bme18I | GGWCC | 3 cut(s) | 1267, 1498, 2936 |
| BmgT120I | GGNCC | 3 cut(s) | 1267, 1498, 2936 |
| BmiI | GGNNCC | 3 cut(s) | 1578, 1595, 2871 |
| BmrFI | CCNGG | 3 cut(s) | 717, 2147, 2895 |
| BmrI | ACTGGG | 1 cut(s) | 3104 |
| BmuI | ACTGGG | 1 cut(s) | 3104 |
| BplI | GAGNNNNNCTC | 1 cut(s) | 28 |
| BpmI | CTGGAG | 2 cut(s) | 1954, 2210 |
| Bpu10I | CCTNAGC | 3 cut(s) | 1114, 1761, 2117 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 536 |
| Bpu14I | TTCGAA | 1 cut(s) | 584 |
| BpuEI | CTTGAG | 5 cut(s) | 1548, 1721, 2054, 3012, 3323 |
| BpuMI | CCSGG | 2 cut(s) | 717, 2147 |
| Bsa29I | ATCGAT | 1 cut(s) | 1715 |
| BsaAI | YACGTR | 1 cut(s) | 3590 |
| BsaI | GGTCTC | 1 cut(s) | 1730 |
| BsaJI | CCNNGG | 2 cut(s) | 24, 1494 |
| BsaWI | WCCGGW | 3 cut(s) | 456, 2080, 2278 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 809, 839, 2456, 2486, 2861, 2891 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 722, 1858 |
| Bse118I | RCCGGY | 1 cut(s) | 2987 |
| Bse1I | ACTGG | 7 cut(s) | 424, 1010, 1434, 1844, 2628, 3110, 3217 |
| Bse3DI | GCAATG | 5 cut(s) | 406, 1032, 1416, 1772, 2773 |
| BseAI | TCCGGA | 2 cut(s) | 2080, 2278 |
| BseBI | CCWGG | 1 cut(s) | 2895 |
| BseCI | ATCGAT | 1 cut(s) | 1715 |
| BseDI | CCNNGG | 2 cut(s) | 24, 1494 |
| BseGI | GGATG | 6 cut(s) | 717, 1216, 2112, 2188, 2261, 2664 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 722, 1858 |
| BseMI | GCAATG | 5 cut(s) | 406, 1032, 1416, 1772, 2773 |
| BseMII | CTCAG | 8 cut(s) | 127, 527, 1343, 1775, 1996, 2131, 2337, 2965 |
| BseNI | ACTGG | 7 cut(s) | 424, 1010, 1434, 1844, 2628, 3110, 3217 |
| BseRI | GAGGAG | 4 cut(s) | 20, 93, 302, 698 |
| BseXI | GCAGC | 4 cut(s) | 64, 1432, 2750, 3240 |
| Bsh1236I | CGCG | 1 cut(s) | 2261 |
| BshFI | GGCC | 3 cut(s) | 11, 227, 3281 |
| BshNI | GGYRCC | 1 cut(s) | 1593 |
| BshVI | ATCGAT | 1 cut(s) | 1715 |
| BsiHKAI | GWGCWC | 5 cut(s) | 446, 495, 822, 2952, 3339 |
| BsiSI | CCGG | 7 cut(s) | 457, 717, 2081, 2146, 2279, 2351, 2988 |
| BslFI | GGGAC | 3 cut(s) | 381, 1073, 2018 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 722, 1858 |
| BsmAI | GTCTC | 8 cut(s) | 680, 1730, 2072, 2079, 2101, 2224, 2291, 2617 |
| BsmFI | GGGAC | 3 cut(s) | 381, 1073, 2018 |
| BsmI | GAATGC | 2 cut(s) | 296, 2961 |
| BsnI | GGCC | 3 cut(s) | 11, 227, 3281 |
| Bso31I | GGTCTC | 1 cut(s) | 1730 |
| Bsp119I | TTCGAA | 1 cut(s) | 584 |
| Bsp1286I | GDGCHC | 5 cut(s) | 446, 495, 822, 2952, 3339 |
| Bsp13I | TCCGGA | 2 cut(s) | 2080, 2278 |
| Bsp1407I | TGTACA | 1 cut(s) | 2060 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 536 |
| BspACI | CCGC | 6 cut(s) | 47, 50, 91, 763, 1883, 3525 |
| BspANI | GGCC | 3 cut(s) | 11, 227, 3281 |
| BspCNI | CTCAG | 8 cut(s) | 126, 528, 1344, 1774, 1995, 2130, 2336, 2964 |
| BspDI | ATCGAT | 1 cut(s) | 1715 |
| BspEI | TCCGGA | 2 cut(s) | 2080, 2278 |
| BspFNI | CGCG | 1 cut(s) | 2261 |
| BspHI | TCATGA | 4 cut(s) | 1176, 1467, 1479, 2923 |
| BspLI | GGNNCC | 3 cut(s) | 1578, 1595, 2871 |
| BspPI | GGATC | 5 cut(s) | 224, 467, 3101, 3240, 3469 |
| BspQI | GCTCTTC | 1 cut(s) | 1546 |
| BspT104I | TTCGAA | 1 cut(s) | 584 |
| BspT107I | GGYRCC | 1 cut(s) | 1593 |
| BspTI | CTTAAG | 6 cut(s) | 775, 1901, 2135, 2449, 2603, 3349 |
| BspTNI | GGTCTC | 1 cut(s) | 1730 |
| BsrDI | GCAATG | 5 cut(s) | 406, 1032, 1416, 1772, 2773 |
| BsrFI | RCCGGY | 1 cut(s) | 2987 |
| BsrGI | TGTACA | 1 cut(s) | 2060 |
| BsrI | ACTGG | 7 cut(s) | 424, 1010, 1434, 1844, 2628, 3110, 3217 |
| BssAI | RCCGGY | 1 cut(s) | 2987 |
| BssECI | CCNNGG | 2 cut(s) | 24, 1494 |
| BssSI | CACGAG | 1 cut(s) | 620 |
| Bst2BI | CACGAG | 1 cut(s) | 620 |
| Bst2UI | CCWGG | 1 cut(s) | 2895 |
| Bst4CI | ACNGT | 7 cut(s) | 372, 645, 1095, 1700, 2611, 3044, 3520 |
| BstAFI | CTTAAG | 6 cut(s) | 775, 1901, 2135, 2449, 2603, 3349 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1519 |
| BstAUI | TGTACA | 1 cut(s) | 2060 |
| BstBAI | YACGTR | 1 cut(s) | 3590 |
| BstBI | TTCGAA | 1 cut(s) | 584 |
| BstC8I | GCNNGC | 3 cut(s) | 836, 840, 2985 |
| BstF5I | GGATG | 6 cut(s) | 717, 1216, 2112, 2188, 2261, 2664 |
| BstFNI | CGCG | 1 cut(s) | 2261 |
| BstH2I | RGCGCY | 2 cut(s) | 536, 2764 |
| BstHHI | GCGC | 5 cut(s) | 399, 535, 1640, 2261, 2763 |
| BstMAI | GTCTC | 8 cut(s) | 680, 1730, 2072, 2079, 2101, 2224, 2291, 2617 |
| BstNI | CCWGG | 1 cut(s) | 2895 |
| BstNSI | RCATGY | 5 cut(s) | 188, 2631, 3167, 3498, 3648 |
| BstSCI | CCNGG | 3 cut(s) | 715, 2145, 2893 |
| BstSFI | CTRYAG | 1 cut(s) | 1744 |
| BstUI | CGCG | 1 cut(s) | 2261 |
| BstV1I | GCAGC | 4 cut(s) | 64, 1432, 2750, 3240 |
| BstX2I | RGATCY | 5 cut(s) | 670, 1246, 1740, 3195, 3245 |
| BstYI | RGATCY | 5 cut(s) | 670, 1246, 1740, 3195, 3245 |
| Bsu15I | ATCGAT | 1 cut(s) | 1715 |
| BsuI | GTATCC | 2 cut(s) | 1948, 2389 |
| BsuRI | GGCC | 3 cut(s) | 11, 227, 3281 |
| BsuTUI | ATCGAT | 1 cut(s) | 1715 |
| BtsCI | GGATG | 6 cut(s) | 717, 1216, 2112, 2188, 2261, 2664 |
| BtsI | GCAGTG | 1 cut(s) | 3382 |
| BtsIMutI | CAGTG | 6 cut(s) | 431, 1814, 1837, 2621, 3057, 3382 |
| Cac8I | GCNNGC | 3 cut(s) | 836, 840, 2985 |
| CaiI | CAGNNNCTG | 1 cut(s) | 2124 |
| CciI | TCATGA | 4 cut(s) | 1176, 1467, 1479, 2923 |
| CfoI | GCGC | 5 cut(s) | 399, 535, 1640, 2261, 2763 |
| Cfr10I | RCCGGY | 1 cut(s) | 2987 |
| Cfr13I | GGNCC | 3 cut(s) | 1267, 1498, 2936 |
| ClaI | ATCGAT | 1 cut(s) | 1715 |
| Csp6I | GTAC | 3 cut(s) | 244, 2061, 3309 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1569, 1604 |
| CviQI | GTAC | 3 cut(s) | 244, 2061, 3309 |
| DraI | TTTAAA | 2 cut(s) | 3202, 3390 |
| EaeI | YGGCCR | 1 cut(s) | 225 |
| Ecl136II | GAGCTC | 2 cut(s) | 444, 2950 |
| Eco147I | AGGCCT | 2 cut(s) | 11, 3281 |
| Eco24I | GRGCYC | 2 cut(s) | 446, 2952 |
| Eco31I | GGTCTC | 1 cut(s) | 1730 |
| Eco32I | GATATC | 1 cut(s) | 2427 |
| Eco47I | GGWCC | 3 cut(s) | 1267, 1498, 2936 |
| Eco47III | AGCGCT | 2 cut(s) | 534, 2762 |
| Eco53kI | GAGCTC | 2 cut(s) | 444, 2950 |
| Eco57I | CTGAAG | 4 cut(s) | 453, 1461, 2288, 2773 |
| Eco72I | CACGTG | 1 cut(s) | 3590 |
| EcoICRI | GAGCTC | 2 cut(s) | 444, 2950 |
| EcoRI | GAATTC | 2 cut(s) | 2141, 2857 |
| EcoRII | CCWGG | 1 cut(s) | 2893 |
| EcoRV | GATATC | 1 cut(s) | 2427 |
| EcoT22I | ATGCAT | 3 cut(s) | 296, 1515, 2834 |
| EcoT38I | GRGCYC | 2 cut(s) | 446, 2952 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 3332, 3364 |
| FaqI | GGGAC | 3 cut(s) | 381, 1073, 2018 |
| FauI | CCCGC | 1 cut(s) | 1890 |
| FauNDI | CATATG | 2 cut(s) | 904, 1558 |
| FbaI | TGATCA | 1 cut(s) | 2461 |
| FblI | GTMKAC | 2 cut(s) | 1426, 1896 |
| Fnu4HI | GCNGC | 6 cut(s) | 47, 50, 53, 1446, 2764, 3229 |
| FokI | GGATG | 6 cut(s) | 724, 1203, 2099, 2195, 2268, 2651 |
| FriOI | GRGCYC | 2 cut(s) | 446, 2952 |
| Fsp4HI | GCNGC | 6 cut(s) | 47, 50, 53, 1446, 2764, 3229 |
| FspBI | CTAG | 9 cut(s) | 275, 668, 1295, 1422, 1536, 1844, 2165, 3071, 3258 |
| FspI | TGCGCA | 1 cut(s) | 398 |
| GlaI | GCGC | 5 cut(s) | 398, 534, 1639, 2260, 2762 |
| GluI | GCNGC | 6 cut(s) | 47, 50, 53, 1446, 2764, 3229 |
| GsuI | CTGGAG | 2 cut(s) | 1954, 2210 |
| HaeII | RGCGCY | 2 cut(s) | 536, 2764 |
| HaeIII | GGCC | 3 cut(s) | 11, 227, 3281 |
| HapII | CCGG | 7 cut(s) | 457, 717, 2081, 2146, 2279, 2351, 2988 |
| HhaI | GCGC | 5 cut(s) | 399, 535, 1640, 2261, 2763 |
| Hin6I | GCGC | 5 cut(s) | 397, 533, 1638, 2259, 2761 |
| HinP1I | GCGC | 5 cut(s) | 397, 533, 1638, 2259, 2761 |
| HincII | GTYRAC | 2 cut(s) | 142, 1897 |
| HindII | GTYRAC | 2 cut(s) | 142, 1897 |
| HindIII | AAGCTT | 4 cut(s) | 435, 1904, 2555, 3537 |
| HpaII | CCGG | 7 cut(s) | 457, 717, 2081, 2146, 2279, 2351, 2988 |
| HphI | GGTGA | 3 cut(s) | 2161, 3514, 3574 |
| Hpy166II | GTNNAC | 8 cut(s) | 142, 176, 246, 412, 1427, 1897, 2061, 2903 |
| Hpy8I | GTNNAC | 8 cut(s) | 142, 176, 246, 412, 1427, 1897, 2061, 2903 |
| Hpy99I | CGWCG | 3 cut(s) | 491, 959, 2434 |
| HpyCH4III | ACNGT | 7 cut(s) | 372, 645, 1095, 1700, 2611, 3044, 3520 |
| HpyCH4IV | ACGT | 4 cut(s) | 2032, 3205, 3455, 3589 |
| HpySE526I | ACGT | 4 cut(s) | 2032, 3205, 3455, 3589 |
| HspAI | GCGC | 5 cut(s) | 397, 533, 1638, 2259, 2761 |
| Kpn2I | TCCGGA | 2 cut(s) | 2080, 2278 |
| Ksp22I | TGATCA | 1 cut(s) | 2461 |
| LguI | GCTCTTC | 1 cut(s) | 1546 |
| LmnI | GCTCC | 7 cut(s) | 315, 817, 1576, 2343, 2477, 2869, 3372 |
| Lsp1109I | GCAGC | 4 cut(s) | 64, 1432, 2750, 3240 |
| MaeI | CTAG | 9 cut(s) | 275, 668, 1295, 1422, 1536, 1844, 2165, 3071, 3258 |
| MaeII | ACGT | 4 cut(s) | 2032, 3205, 3455, 3589 |
| MflI | RGATCY | 5 cut(s) | 670, 1246, 1740, 3195, 3245 |
| MhlI | GDGCHC | 5 cut(s) | 446, 495, 822, 2952, 3339 |
| MlsI | TGGCCA | 1 cut(s) | 227 |
| MluNI | TGGCCA | 1 cut(s) | 227 |
| MlyI | GAGTC | 5 cut(s) | 218, 627, 682, 1363, 2545 |
| MmeI | TCCRAC | 8 cut(s) | 531, 807, 1176, 2312, 2496, 2914, 3094, 3378 |
| Mox20I | TGGCCA | 1 cut(s) | 227 |
| Mph1103I | ATGCAT | 3 cut(s) | 296, 1515, 2834 |
| MroI | TCCGGA | 2 cut(s) | 2080, 2278 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1475 |
| MscI | TGGCCA | 1 cut(s) | 227 |
| MslI | CAYNNNNRTG | 5 cut(s) | 1164, 2580, 2626, 2970, 3619 |
| Msp20I | TGGCCA | 1 cut(s) | 227 |
| MspA1I | CMGCKG | 1 cut(s) | 3186 |
| MspCI | CTTAAG | 6 cut(s) | 775, 1901, 2135, 2449, 2603, 3349 |
| MspI | CCGG | 7 cut(s) | 457, 717, 2081, 2146, 2279, 2351, 2988 |
| MspR9I | CCNGG | 3 cut(s) | 717, 2147, 2895 |
| Mva1269I | GAATGC | 2 cut(s) | 296, 2961 |
| MvaI | CCWGG | 1 cut(s) | 2895 |
| MvnI | CGCG | 1 cut(s) | 2261 |
| NciI | CCSGG | 2 cut(s) | 717, 2147 |
| NdeI | CATATG | 2 cut(s) | 904, 1558 |
| NlaIV | GGNNCC | 3 cut(s) | 1578, 1595, 2871 |
| NmuCI | GTSAC | 7 cut(s) | 868, 965, 1118, 3010, 3514, 3520, 3659 |
| NsbI | TGCGCA | 1 cut(s) | 398 |
| NsiI | ATGCAT | 3 cut(s) | 296, 1515, 2834 |
| NspI | RCATGY | 5 cut(s) | 188, 2631, 3167, 3498, 3648 |
| NspV | TTCGAA | 1 cut(s) | 584 |
| PagI | TCATGA | 4 cut(s) | 1176, 1467, 1479, 2923 |
| PceI | AGGCCT | 2 cut(s) | 11, 3281 |
| PciI | ACATGT | 2 cut(s) | 184, 3494 |
| PciSI | GCTCTTC | 1 cut(s) | 1546 |
| PctI | GAATGC | 2 cut(s) | 296, 2961 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1475 |
| PfoI | TCCNGGA | 1 cut(s) | 2893 |
| PkrI | GCNGC | 6 cut(s) | 48, 51, 54, 1447, 2765, 3230 |
| PleI | GAGTC | 5 cut(s) | 217, 627, 682, 1362, 2544 |
| PmaCI | CACGTG | 1 cut(s) | 3590 |
| PmlI | CACGTG | 1 cut(s) | 3590 |
| PpsI | GAGTC | 5 cut(s) | 217, 627, 682, 1362, 2544 |
| Ppu21I | YACGTR | 1 cut(s) | 3590 |
| PscI | ACATGT | 2 cut(s) | 184, 3494 |
| PshBI | ATTAAT | 2 cut(s) | 788, 1485 |
| Psp124BI | GAGCTC | 2 cut(s) | 446, 2952 |
| Psp6I | CCWGG | 1 cut(s) | 2893 |
| PspCI | CACGTG | 1 cut(s) | 3590 |
| PspGI | CCWGG | 1 cut(s) | 2893 |
| PspN4I | GGNNCC | 3 cut(s) | 1578, 1595, 2871 |
| PspPI | GGNCC | 3 cut(s) | 1267, 1498, 2936 |
| PstNI | CAGNNNCTG | 1 cut(s) | 2124 |
| PsuI | RGATCY | 5 cut(s) | 670, 1246, 1740, 3195, 3245 |
| PvuII | CAGCTG | 1 cut(s) | 3186 |
| RsaI | GTAC | 3 cut(s) | 245, 2062, 3310 |
| RsaNI | GTAC | 3 cut(s) | 244, 2061, 3309 |
| RseI | CAYNNNNRTG | 5 cut(s) | 1164, 2580, 2626, 2970, 3619 |
| SacI | GAGCTC | 2 cut(s) | 446, 2952 |
| SalI | GTCGAC | 1 cut(s) | 1895 |
| SapI | GCTCTTC | 1 cut(s) | 1546 |
| SatI | GCNGC | 6 cut(s) | 47, 50, 53, 1446, 2764, 3229 |
| Sau96I | GGNCC | 3 cut(s) | 1267, 1498, 2936 |
| SchI | GAGTC | 5 cut(s) | 218, 627, 682, 1363, 2545 |
| ScrFI | CCNGG | 3 cut(s) | 717, 2147, 2895 |
| SduI | GDGCHC | 5 cut(s) | 446, 495, 822, 2952, 3339 |
| SfcI | CTRYAG | 1 cut(s) | 1744 |
| SfuI | TTCGAA | 1 cut(s) | 584 |
| SinI | GGWCC | 3 cut(s) | 1267, 1498, 2936 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 1164, 2580, 2626, 2970, 3619 |
| SseBI | AGGCCT | 2 cut(s) | 11, 3281 |
| SsiI | CCGC | 6 cut(s) | 47, 50, 91, 763, 1883, 3525 |
| SspI | AATATT | 2 cut(s) | 2817, 3151 |
| SspMI | CTAG | 9 cut(s) | 275, 668, 1295, 1422, 1536, 1844, 2165, 3071, 3258 |
| SstI | GAGCTC | 2 cut(s) | 446, 2952 |
| StuI | AGGCCT | 2 cut(s) | 11, 3281 |
| StyD4I | CCNGG | 3 cut(s) | 715, 2145, 2893 |
| TaaI | ACNGT | 7 cut(s) | 372, 645, 1095, 1700, 2611, 3044, 3520 |
| TaiI | ACGT | 4 cut(s) | 2035, 3208, 3458, 3592 |
| TaqII | GACCGA | 1 cut(s) | 1515 |
| TatI | WGTACW | 1 cut(s) | 2060 |
| TauI | GCSGC | 2 cut(s) | 49, 52 |
| TscAI | CASTG | 6 cut(s) | 431, 1821, 1844, 2628, 3057, 3382 |
| TseFI | GTSAC | 7 cut(s) | 868, 965, 1118, 3010, 3514, 3520, 3659 |
| TseI | GCWGC | 4 cut(s) | 52, 1445, 2763, 3228 |
| Tsp45I | GTSAC | 7 cut(s) | 868, 965, 1118, 3010, 3514, 3520, 3659 |
| TspGWI | ACGGA | 2 cut(s) | 226, 592 |
| TspRI | CASTG | 6 cut(s) | 431, 1821, 1844, 2628, 3057, 3382 |
| Vha464I | CTTAAG | 6 cut(s) | 775, 1901, 2135, 2449, 2603, 3349 |
| VpaK11BI | GGWCC | 3 cut(s) | 1267, 1498, 2936 |
| VspI | ATTAAT | 2 cut(s) | 788, 1485 |
| XbaI | TCTAGA | 1 cut(s) | 2164 |
| XceI | RCATGY | 5 cut(s) | 188, 2631, 3167, 3498, 3648 |
| XcmI | CCANNNNNNNNNTGG | 3 cut(s) | 1587, 1968, 3117 |
| XmiI | GTMKAC | 2 cut(s) | 1426, 1896 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1475 |
| XspI | CTAG | 9 cut(s) | 275, 668, 1295, 1422, 1536, 1844, 2165, 3071, 3258 |
| Zsp2I | ATGCAT | 3 cut(s) | 296, 1515, 2834 |