RESISTANCE protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 16 - 186 | 3.1e-48 | TIR domain |
| TIR_2 | PF13676 | 18 - 112 | 4e-12 | TIR domain |
| NB-ARC | PF00931 | 211 - 378 | 3.4e-17 | NB-ARC domain |
| WHD_ROQ1 | PF23282 | 453 - 518 | 5.4e-07 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_3 | PF07725 | 638 - 657 | 6.2e-08 | Leucine Rich Repeat |
| C-JID | PF20160 | 964 - 1113 | 3.4e-12 | C-JID domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 3065 |
| AccI | GTMKAC | 3 cut(s) | 882, 1420, 1920 |
| AccII | CGCG | 1 cut(s) | 1725 |
| AciI | CCGC | 6 cut(s) | 41, 509, 1723, 2211, 3043, 3138 |
| AclWI | GGATC | 5 cut(s) | 672, 834, 890, 1269, 2944 |
| AcoI | YGGCCR | 2 cut(s) | 1507, 3542 |
| AfaI | GTAC | 9 cut(s) | 180, 286, 936, 1194, 2152, 2617, 3277, 3371, 3449 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 542, 719, 1444 |
| AflII | CTTAAG | 4 cut(s) | 1829, 1925, 1984, 2533 |
| AflIII | ACRYGT | 1 cut(s) | 1041 |
| AjiI | CACGTC | 1 cut(s) | 756 |
| AjnI | CCWGG | 3 cut(s) | 2368, 2769, 2893 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1862, 1894 |
| Alw21I | GWGCWC | 1 cut(s) | 3358 |
| Alw26I | GTCTC | 6 cut(s) | 597, 611, 1877, 2162, 2314, 3016 |
| AlwI | GGATC | 5 cut(s) | 672, 834, 890, 1269, 2944 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 2214 |
| AoxI | GGCC | 6 cut(s) | 111, 1207, 1507, 2371, 2709, 3542 |
| ApeKI | GCWGC | 7 cut(s) | 43, 1661, 1930, 2022, 2214, 2556, 2780 |
| AseI | ATTAAT | 2 cut(s) | 1494, 1911 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 1166, 2052, 2166 |
| AspLEI | GCGC | 3 cut(s) | 84, 784, 1357 |
| AspS9I | GGNCC | 3 cut(s) | 2602, 2710, 3123 |
| AsuC2I | CCSGG | 2 cut(s) | 714, 2989 |
| AsuHPI | GGTGA | 6 cut(s) | 380, 407, 523, 1976, 2393, 2746 |
| AsuII | TTCGAA | 1 cut(s) | 1274 |
| AvaII | GGWCC | 2 cut(s) | 2602, 3123 |
| AxyI | CCTNAGG | 1 cut(s) | 598 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 3169, 3202 |
| BanII | GRGCYC | 1 cut(s) | 1301 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1176, 1208 |
| BbsI | GAAGAC | 8 cut(s) | 36, 162, 521, 1315, 1710, 2696, 3087, 3160 |
| Bbv12I | GWGCWC | 1 cut(s) | 3358 |
| BbvI | GCAGC | 7 cut(s) | 55, 1648, 1917, 2034, 2201, 2543, 2767 |
| BceAI | ACGGC | 5 cut(s) | 126, 542, 2358, 2689, 3557 |
| BciT130I | CCWGG | 3 cut(s) | 2370, 2771, 2895 |
| BciVI | GTATCC | 1 cut(s) | 3170 |
| BclI | TGATCA | 2 cut(s) | 1141, 3627 |
| BcnI | CCSGG | 2 cut(s) | 714, 2989 |
| BcoDI | GTCTC | 6 cut(s) | 597, 611, 1877, 2162, 2314, 3016 |
| BfaI | CTAG | 7 cut(s) | 173, 986, 1217, 1685, 2357, 3158, 3585 |
| BfmI | CTRYAG | 5 cut(s) | 1350, 1936, 2677, 3006, 3483 |
| BfrI | CTTAAG | 4 cut(s) | 1829, 1925, 1984, 2533 |
| BfuAI | ACCTGC | 1 cut(s) | 3065 |
| BfuI | GTATCC | 1 cut(s) | 3170 |
| BisI | GCNGC | 9 cut(s) | 44, 1662, 1931, 2023, 2212, 2215, 2557, 2781, 3043 |
| BlsI | GCNGC | 9 cut(s) | 45, 1663, 1932, 2024, 2213, 2216, 2558, 2782, 3044 |
| Bme1390I | CCNGG | 5 cut(s) | 714, 2370, 2771, 2895, 2989 |
| Bme18I | GGWCC | 2 cut(s) | 2602, 3123 |
| BmgBI | CACGTC | 1 cut(s) | 756 |
| BmgT120I | GGNCC | 3 cut(s) | 2602, 2710, 3123 |
| BmiI | GGNNCC | 2 cut(s) | 333, 1604 |
| BmrFI | CCNGG | 5 cut(s) | 714, 2370, 2771, 2895, 2989 |
| BoxI | GACNNNNGTC | 1 cut(s) | 162 |
| BpiI | GAAGAC | 8 cut(s) | 36, 162, 521, 1315, 1710, 2696, 3087, 3160 |
| BpmI | CTGGAG | 2 cut(s) | 287, 350 |
| Bpu10I | CCTNAGC | 2 cut(s) | 390, 3333 |
| Bpu14I | TTCGAA | 1 cut(s) | 1274 |
| BpuEI | CTTGAG | 3 cut(s) | 1745, 1993, 2414 |
| BpuMI | CCSGG | 2 cut(s) | 714, 2989 |
| Bsa29I | ATCGAT | 1 cut(s) | 789 |
| BsaAI | YACGTR | 1 cut(s) | 880 |
| BsaBI | GATNNNNATC | 3 cut(s) | 314, 2001, 3576 |
| BsaJI | CCNNGG | 2 cut(s) | 67, 1438 |
| BsaWI | WCCGGW | 3 cut(s) | 527, 538, 1752 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 542, 719, 1444 |
| Bse1I | ACTGG | 5 cut(s) | 995, 1428, 1868, 3110, 3183 |
| Bse21I | CCTNAGG | 1 cut(s) | 598 |
| Bse3DI | GCAATG | 2 cut(s) | 1026, 1461 |
| Bse8I | GATNNNNATC | 3 cut(s) | 314, 2001, 3576 |
| BseBI | CCWGG | 3 cut(s) | 2370, 2771, 2895 |
| BseCI | ATCGAT | 1 cut(s) | 789 |
| BseDI | CCNNGG | 2 cut(s) | 67, 1438 |
| BseJI | GATNNNNATC | 3 cut(s) | 314, 2001, 3576 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 542, 719, 1444 |
| BseMI | GCAATG | 2 cut(s) | 1026, 1461 |
| BseMII | CTCAG | 5 cut(s) | 612, 2221, 2529, 2931, 3237 |
| BseNI | ACTGG | 5 cut(s) | 995, 1428, 1868, 3110, 3183 |
| BseRI | GAGGAG | 2 cut(s) | 212, 2948 |
| BseXI | GCAGC | 7 cut(s) | 55, 1648, 1917, 2034, 2201, 2543, 2767 |
| BseYI | CCCAGC | 1 cut(s) | 1301 |
| BsgI | GTGCAG | 4 cut(s) | 1482, 2041, 2540, 3043 |
| Bsh1236I | CGCG | 1 cut(s) | 1725 |
| BshFI | GGCC | 6 cut(s) | 113, 1209, 1509, 2373, 2711, 3544 |
| BshVI | ATCGAT | 1 cut(s) | 789 |
| BsiHKAI | GWGCWC | 1 cut(s) | 3358 |
| BsiSI | CCGG | 7 cut(s) | 85, 228, 528, 539, 714, 1753, 2988 |
| BslFI | GGGAC | 1 cut(s) | 2497 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 542, 719, 1444 |
| BsmAI | GTCTC | 6 cut(s) | 597, 611, 1877, 2162, 2314, 3016 |
| BsmFI | GGGAC | 1 cut(s) | 2497 |
| BsmI | GAATGC | 1 cut(s) | 3236 |
| BsnI | GGCC | 6 cut(s) | 113, 1209, 1509, 2373, 2711, 3544 |
| Bsp119I | TTCGAA | 1 cut(s) | 1274 |
| Bsp1286I | GDGCHC | 2 cut(s) | 1301, 3358 |
| Bsp1407I | TGTACA | 2 cut(s) | 1192, 2150 |
| BspACI | CCGC | 6 cut(s) | 41, 509, 1723, 2211, 3043, 3138 |
| BspANI | GGCC | 6 cut(s) | 113, 1209, 1509, 2373, 2711, 3544 |
| BspCNI | CTCAG | 5 cut(s) | 611, 2220, 2528, 2932, 3236 |
| BspDI | ATCGAT | 1 cut(s) | 789 |
| BspFNI | CGCG | 1 cut(s) | 1725 |
| BspHI | TCATGA | 3 cut(s) | 1170, 2923, 3208 |
| BspLI | GGNNCC | 2 cut(s) | 333, 1604 |
| BspMI | ACCTGC | 1 cut(s) | 3065 |
| BspPI | GGATC | 5 cut(s) | 672, 834, 890, 1269, 2944 |
| BspQI | GCTCTTC | 2 cut(s) | 978, 2400 |
| BspT104I | TTCGAA | 1 cut(s) | 1274 |
| BspTI | CTTAAG | 4 cut(s) | 1829, 1925, 1984, 2533 |
| BsrDI | GCAATG | 2 cut(s) | 1026, 1461 |
| BsrGI | TGTACA | 2 cut(s) | 1192, 2150 |
| BsrI | ACTGG | 5 cut(s) | 995, 1428, 1868, 3110, 3183 |
| BssECI | CCNNGG | 2 cut(s) | 67, 1438 |
| BssT1I | CCWWGG | 1 cut(s) | 1438 |
| Bst2UI | CCWGG | 3 cut(s) | 2370, 2771, 2895 |
| Bst6I | CTCTTC | 7 cut(s) | 182, 648, 978, 2172, 2400, 3496, 3562 |
| BstAFI | CTTAAG | 4 cut(s) | 1829, 1925, 1984, 2533 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1460 |
| BstAUI | TGTACA | 2 cut(s) | 1192, 2150 |
| BstBAI | YACGTR | 1 cut(s) | 880 |
| BstBI | TTCGAA | 1 cut(s) | 1274 |
| BstC8I | GCNNGC | 5 cut(s) | 780, 833, 2127, 2822, 2985 |
| BstDSI | CCRYGG | 1 cut(s) | 67 |
| BstFNI | CGCG | 1 cut(s) | 1725 |
| BstHHI | GCGC | 3 cut(s) | 84, 784, 1357 |
| BstMAI | GTCTC | 6 cut(s) | 597, 611, 1877, 2162, 2314, 3016 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 43, 841, 1460, 1722, 2993, 3002 |
| BstNI | CCWGG | 3 cut(s) | 2370, 2771, 2895 |
| BstNSI | RCATGY | 2 cut(s) | 782, 1045 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 162 |
| BstSCI | CCNGG | 5 cut(s) | 712, 2368, 2769, 2893, 2987 |
| BstSFI | CTRYAG | 5 cut(s) | 1350, 1936, 2677, 3006, 3483 |
| BstUI | CGCG | 1 cut(s) | 1725 |
| BstV1I | GCAGC | 7 cut(s) | 55, 1648, 1917, 2034, 2201, 2543, 2767 |
| BstV2I | GAAGAC | 8 cut(s) | 36, 162, 521, 1315, 1710, 2696, 3087, 3160 |
| BstX2I | RGATCY | 2 cut(s) | 895, 2936 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 817 |
| BstYI | RGATCY | 2 cut(s) | 895, 2936 |
| Bsu15I | ATCGAT | 1 cut(s) | 789 |
| Bsu36I | CCTNAGG | 1 cut(s) | 598 |
| BsuI | GTATCC | 1 cut(s) | 3170 |
| BsuRI | GGCC | 6 cut(s) | 113, 1209, 1509, 2373, 2711, 3544 |
| BsuTUI | ATCGAT | 1 cut(s) | 789 |
| BtgI | CCRYGG | 1 cut(s) | 67 |
| BtrI | CACGTC | 1 cut(s) | 756 |
| BtsIMutI | CAGTG | 9 cut(s) | 21, 1324, 1861, 1945, 2084, 2523, 2663, 3057, 3630 |
| BveI | ACCTGC | 1 cut(s) | 3065 |
| Cac8I | GCNNGC | 5 cut(s) | 780, 833, 2127, 2822, 2985 |
| CaiI | CAGNNNCTG | 1 cut(s) | 2214 |
| CciI | TCATGA | 3 cut(s) | 1170, 2923, 3208 |
| CfoI | GCGC | 3 cut(s) | 84, 784, 1357 |
| Cfr13I | GGNCC | 3 cut(s) | 2602, 2710, 3123 |
| ClaI | ATCGAT | 1 cut(s) | 789 |
| Csp6I | GTAC | 9 cut(s) | 179, 285, 935, 1193, 2151, 2616, 3276, 3370, 3448 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 49, 84 |
| CviQI | GTAC | 9 cut(s) | 179, 285, 935, 1193, 2151, 2616, 3276, 3370, 3448 |
| DraI | TTTAAA | 3 cut(s) | 2424, 2463, 3067 |
| EaeI | YGGCCR | 2 cut(s) | 1507, 3542 |
| Eam1104I | CTCTTC | 7 cut(s) | 182, 648, 978, 2172, 2400, 3496, 3562 |
| EarI | CTCTTC | 7 cut(s) | 182, 648, 978, 2172, 2400, 3496, 3562 |
| Eco130I | CCWWGG | 1 cut(s) | 1438 |
| Eco24I | GRGCYC | 1 cut(s) | 1301 |
| Eco47I | GGWCC | 2 cut(s) | 2602, 3123 |
| Eco81I | CCTNAGG | 1 cut(s) | 598 |
| EcoRI | GAATTC | 1 cut(s) | 1270 |
| EcoRII | CCWGG | 3 cut(s) | 2368, 2769, 2893 |
| EcoT14I | CCWWGG | 1 cut(s) | 1438 |
| EcoT22I | ATGCAT | 2 cut(s) | 1369, 1524 |
| EcoT38I | GRGCYC | 1 cut(s) | 1301 |
| ErhI | CCWWGG | 1 cut(s) | 1438 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 3237, 3269 |
| FaqI | GGGAC | 1 cut(s) | 2497 |
| FauI | CCCGC | 1 cut(s) | 3131 |
| FauNDI | CATATG | 1 cut(s) | 2833 |
| FbaI | TGATCA | 2 cut(s) | 1141, 3627 |
| FblI | GTMKAC | 3 cut(s) | 882, 1420, 1920 |
| Fnu4HI | GCNGC | 9 cut(s) | 44, 1662, 1931, 2023, 2212, 2215, 2557, 2781, 3043 |
| FriOI | GRGCYC | 1 cut(s) | 1301 |
| Fsp4HI | GCNGC | 9 cut(s) | 44, 1662, 1931, 2023, 2212, 2215, 2557, 2781, 3043 |
| FspBI | CTAG | 7 cut(s) | 173, 986, 1217, 1685, 2357, 3158, 3585 |
| GlaI | GCGC | 3 cut(s) | 83, 783, 1356 |
| GluI | GCNGC | 9 cut(s) | 44, 1662, 1931, 2023, 2212, 2215, 2557, 2781, 3043 |
| GsaI | CCCAGC | 1 cut(s) | 1305 |
| GsuI | CTGGAG | 2 cut(s) | 287, 350 |
| HaeIII | GGCC | 6 cut(s) | 113, 1209, 1509, 2373, 2711, 3544 |
| HapII | CCGG | 7 cut(s) | 85, 228, 528, 539, 714, 1753, 2988 |
| HhaI | GCGC | 3 cut(s) | 84, 784, 1357 |
| Hin6I | GCGC | 3 cut(s) | 82, 782, 1355 |
| HinP1I | GCGC | 3 cut(s) | 82, 782, 1355 |
| HincII | GTYRAC | 4 cut(s) | 167, 525, 908, 1921 |
| HindII | GTYRAC | 4 cut(s) | 167, 525, 908, 1921 |
| HindIII | AAGCTT | 4 cut(s) | 423, 2051, 2312, 2981 |
| HpaII | CCGG | 7 cut(s) | 85, 228, 528, 539, 714, 1753, 2988 |
| HphI | GGTGA | 6 cut(s) | 380, 407, 523, 1976, 2393, 2746 |
| Hpy166II | GTNNAC | 8 cut(s) | 167, 525, 883, 908, 1421, 1784, 1921, 2151 |
| Hpy8I | GTNNAC | 8 cut(s) | 167, 525, 883, 908, 1421, 1784, 1921, 2151 |
| Hpy99I | CGWCG | 2 cut(s) | 149, 563 |
| HpyCH4IV | ACGT | 4 cut(s) | 135, 755, 879, 3450 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 43, 841, 1460, 1722, 2993, 3002 |
| HpySE526I | ACGT | 4 cut(s) | 135, 755, 879, 3450 |
| HspAI | GCGC | 3 cut(s) | 82, 782, 1355 |
| Ksp22I | TGATCA | 2 cut(s) | 1141, 3627 |
| LguI | GCTCTTC | 2 cut(s) | 978, 2400 |
| LmnI | GCTCC | 2 cut(s) | 331, 1608 |
| Lsp1109I | GCAGC | 7 cut(s) | 55, 1648, 1917, 2034, 2201, 2543, 2767 |
| MaeI | CTAG | 7 cut(s) | 173, 986, 1217, 1685, 2357, 3158, 3585 |
| MaeII | ACGT | 4 cut(s) | 135, 755, 879, 3450 |
| MaeIII | GTNAC | 6 cut(s) | 106, 548, 1964, 3052, 3218, 3265 |
| MflI | RGATCY | 2 cut(s) | 895, 2936 |
| MhlI | GDGCHC | 2 cut(s) | 1301, 3358 |
| MlyI | GAGTC | 3 cut(s) | 209, 251, 2629 |
| MmeI | TCCRAC | 5 cut(s) | 642, 804, 2548, 2914, 3101 |
| Mph1103I | ATGCAT | 2 cut(s) | 1369, 1524 |
| MroXI | GAANNNNTTC | 3 cut(s) | 1166, 2052, 2166 |
| MslI | CAYNNNNRTG | 5 cut(s) | 1125, 1739, 1789, 2495, 2970 |
| MspA1I | CMGCKG | 3 cut(s) | 2211, 2556, 2824 |
| MspCI | CTTAAG | 4 cut(s) | 1829, 1925, 1984, 2533 |
| MspI | CCGG | 7 cut(s) | 85, 228, 528, 539, 714, 1753, 2988 |
| MspR9I | CCNGG | 5 cut(s) | 714, 2370, 2771, 2895, 2989 |
| Mva1269I | GAATGC | 1 cut(s) | 3236 |
| MvaI | CCWGG | 3 cut(s) | 2370, 2771, 2895 |
| MvnI | CGCG | 1 cut(s) | 1725 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 43, 841, 1460, 1722, 2993, 3002 |
| NciI | CCSGG | 2 cut(s) | 714, 2989 |
| NdeI | CATATG | 1 cut(s) | 2833 |
| NlaIV | GGNNCC | 2 cut(s) | 333, 1604 |
| NmeAIII | GCCGAG | 1 cut(s) | 1535 |
| NmuCI | GTSAC | 4 cut(s) | 548, 1964, 3052, 3265 |
| NsiI | ATGCAT | 2 cut(s) | 1369, 1524 |
| NspI | RCATGY | 2 cut(s) | 782, 1045 |
| NspV | TTCGAA | 1 cut(s) | 1274 |
| PaeI | GCATGC | 1 cut(s) | 782 |
| PagI | TCATGA | 3 cut(s) | 1170, 2923, 3208 |
| PciI | ACATGT | 1 cut(s) | 1041 |
| PciSI | GCTCTTC | 2 cut(s) | 978, 2400 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 141 |
| PctI | GAATGC | 1 cut(s) | 3236 |
| PdmI | GAANNNNTTC | 3 cut(s) | 1166, 2052, 2166 |
| PfeI | GAWTC | 8 cut(s) | 90, 310, 436, 2137, 2162, 2571, 2734, 2870 |
| PflFI | GACNNNGTC | 1 cut(s) | 3164 |
| PfoI | TCCNGGA | 1 cut(s) | 2893 |
| PkrI | GCNGC | 9 cut(s) | 45, 1663, 1932, 2024, 2213, 2216, 2558, 2782, 3044 |
| PleI | GAGTC | 3 cut(s) | 208, 250, 2628 |
| PpsI | GAGTC | 3 cut(s) | 208, 250, 2628 |
| Ppu21I | YACGTR | 1 cut(s) | 880 |
| PscI | ACATGT | 1 cut(s) | 1041 |
| PshAI | GACNNNNGTC | 1 cut(s) | 162 |
| PshBI | ATTAAT | 2 cut(s) | 1494, 1911 |
| Psp6I | CCWGG | 3 cut(s) | 2368, 2769, 2893 |
| PspFI | CCCAGC | 1 cut(s) | 1301 |
| PspGI | CCWGG | 3 cut(s) | 2368, 2769, 2893 |
| PspN4I | GGNNCC | 2 cut(s) | 333, 1604 |
| PspPI | GGNCC | 3 cut(s) | 2602, 2710, 3123 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1748, 1780 |
| PstNI | CAGNNNCTG | 1 cut(s) | 2214 |
| PsuI | RGATCY | 2 cut(s) | 895, 2936 |
| PsyI | GACNNNGTC | 1 cut(s) | 3164 |
| PvuII | CAGCTG | 2 cut(s) | 2556, 2824 |
| RsaI | GTAC | 9 cut(s) | 180, 286, 936, 1194, 2152, 2617, 3277, 3371, 3449 |
| RsaNI | GTAC | 9 cut(s) | 179, 285, 935, 1193, 2151, 2616, 3276, 3370, 3448 |
| RseI | CAYNNNNRTG | 5 cut(s) | 1125, 1739, 1789, 2495, 2970 |
| SalI | GTCGAC | 1 cut(s) | 1919 |
| SapI | GCTCTTC | 2 cut(s) | 978, 2400 |
| SatI | GCNGC | 9 cut(s) | 44, 1662, 1931, 2023, 2212, 2215, 2557, 2781, 3043 |
| Sau96I | GGNCC | 3 cut(s) | 2602, 2710, 3123 |
| SchI | GAGTC | 3 cut(s) | 209, 251, 2629 |
| ScrFI | CCNGG | 5 cut(s) | 714, 2370, 2771, 2895, 2989 |
| SduI | GDGCHC | 2 cut(s) | 1301, 3358 |
| SfcI | CTRYAG | 5 cut(s) | 1350, 1936, 2677, 3006, 3483 |
| SfuI | TTCGAA | 1 cut(s) | 1274 |
| SinI | GGWCC | 2 cut(s) | 2602, 3123 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 1125, 1739, 1789, 2495, 2970 |
| SmlI | CTYRAG | 7 cut(s) | 1760, 1829, 1925, 1984, 2008, 2429, 2533 |
| SmoI | CTYRAG | 7 cut(s) | 1760, 1829, 1925, 1984, 2008, 2429, 2533 |
| SphI | GCATGC | 1 cut(s) | 782 |
| SsiI | CCGC | 6 cut(s) | 41, 509, 1723, 2211, 3043, 3138 |
| SspI | AATATT | 1 cut(s) | 1312 |
| SspMI | CTAG | 7 cut(s) | 173, 986, 1217, 1685, 2357, 3158, 3585 |
| StyD4I | CCNGG | 5 cut(s) | 712, 2368, 2769, 2893, 2987 |
| StyI | CCWWGG | 1 cut(s) | 1438 |
| TaiI | ACGT | 4 cut(s) | 138, 758, 882, 3453 |
| TatI | WGTACW | 4 cut(s) | 178, 934, 1192, 2150 |
| TauI | GCSGC | 2 cut(s) | 2214, 3045 |
| TfiI | GAWTC | 8 cut(s) | 90, 310, 436, 2137, 2162, 2571, 2734, 2870 |
| TscAI | CASTG | 9 cut(s) | 28, 1324, 1868, 1945, 2091, 2523, 2663, 3057, 3630 |
| TseFI | GTSAC | 4 cut(s) | 548, 1964, 3052, 3265 |
| TseI | GCWGC | 7 cut(s) | 43, 1661, 1930, 2022, 2214, 2556, 2780 |
| Tsp45I | GTSAC | 4 cut(s) | 548, 1964, 3052, 3265 |
| TspGWI | ACGGA | 6 cut(s) | 56, 302, 788, 1493, 1606, 2226 |
| TspRI | CASTG | 9 cut(s) | 28, 1324, 1868, 1945, 2091, 2523, 2663, 3057, 3630 |
| Tth111I | GACNNNGTC | 1 cut(s) | 3164 |
| Vha464I | CTTAAG | 4 cut(s) | 1829, 1925, 1984, 2533 |
| VpaK11BI | GGWCC | 2 cut(s) | 2602, 3123 |
| VspI | ATTAAT | 2 cut(s) | 1494, 1911 |
| XbaI | TCTAGA | 1 cut(s) | 172 |
| XceI | RCATGY | 2 cut(s) | 782, 1045 |
| XcmI | CCANNNNNNNNNTGG | 4 cut(s) | 211, 1986, 3117, 3170 |
| XmiI | GTMKAC | 3 cut(s) | 882, 1420, 1920 |
| XmnI | GAANNNNTTC | 3 cut(s) | 1166, 2052, 2166 |
| XspI | CTAG | 7 cut(s) | 173, 986, 1217, 1685, 2357, 3158, 3585 |
| Zsp2I | ATGCAT | 2 cut(s) | 1369, 1524 |