Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0012932

Physical Location & Seq

Genomic Coordinates Reverse (-)

5908834 .. 5913317

Gene Structure 4484 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G17880.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3594 bp

ATGACAAGCTCCTCCTCCTGGGTGAAAACGGACGGTGAGACACCCCAAGATCAAGTGTTCATTAATTTCCGTGGAGTCGAACTGCGCAAGAACTTCGTCAGTCATCTGGAGAAGGGCTTAAAAAGGAAAGGGATCAATGCCTTCATAGACACAGATGAAGAGATGGGCCAAGAGTTGAGTGTTCTGCTCGAAAGAATAGAAGGTTCGAGGATCGCGCTAGCCATTTTCTCTCCAAGGTACACGGAGTCAAAATGGTGTTTGAAGGAGCTTGCGAAGATGAAAGAAAGAACGGAACAAAAGGAGCTCGTGGTGATTCCAATCTTCTACAAGGTACAGCCCGTCACTGTTAAAGAATTGAAGGGAGACTTCGGGGATAAGTTCAGGGAGCTGGTGAAGTCTACTGACAAGAAGACGAAGAAAGAATGGAAGGAAGCTTTACAATATGTTCCATTTTTAACCGGCATCGTGTTGGATGAGAAAAGCGATGAGGACGAAGTCATCAATATAATTATCCGAAAGGTTAAAGAAATACTAAATAGACGTTCAGAGGGTCCTCCTTCTAAATGTTCTGCACTACCGCCCCAAAGACACCAGAAACGTCATGAAACCTTTTGGGGAATCGAGCTCCGAATTAAGCAACTAGAAGAAAAGTTACGTTTTGGGTCGGACGAAACAACTCGTACCATCGGTGTTGTTGGGATGCCCGGTATAGGTAAAACCACTCTCGCTACGATGCTATATGAGAAGTGGAATGATAGATTCCTGAGACACGTGTTAATCCGTGATATCCATGAAGCTTCAGAGGAAGACGGGTTAAATTACTTGGCCACGAAATTCTTGCAAGGTTTATTGAAAGTTGAGAATGCCAACATCGAGTCCGTACAAGCTGCTCATGAAGCTTACAAAGATCAGTTACTCGAGACCAAAGTCCTTGTTATTCTTGACAATGTCAGTAACAAGGACCAAGTTGATGCTCTTCTTGGCGAACGCAACTGGATTAAGAAAGGAAGCAAGATTCTCATTACTACAAGCGACAAGTCATTGATGATACAAAGTTTGGTCAATGATACTTACGAAGTCCCTCCATTAAGCGACAAAGATGCCATAAAACATTTTATACGTTACGCATTTGATGGTAACGAAGGAGCTGCTCCCGGCCCCGGGCAAGGAAATTTCCCCAAGTTGTCGAAAGATTTCGTGCATTATACTAAAGGAAATCCACTAGCTCTCCAGATGTTGGGTAAGGAGCTTTTGGGGAAAGATGAGAGTCACTGGGGCTTAAAACTAAATGCATTGGATCAACACCATAACAGTCCACCTGGACAAAGCATTTGCAAGATGCTTCAAAGGGTCTGGGAAGGGAGTTATAAAGCACTGAGTCAAAAAGAAAAAGATGCACTTCTTGACATAGCTTGCTTCAGGTCGCAAGATGAGAATTACGTAGCGAGTTTATTGGATTCAGATGGCCCTAGTAATATATTGGAAGATCTCGTGAACAAGTTCATGATTAATATTTATGCTGGCAAAGTAGATATGCATGATACATTGTATATGCTCTCCAAGGAACTTGGTCGAGAAGCTACTGCTACAGATAGAAAGGGGCGGCATAGGTTGTGGCACCATCACACCATAATTGCTGTGCTGGACAAAAACAAGGGAGGTTCTAATATCAGGTCTATTTTCCTTGACTTGTCTGATATTACAAGAAAATGGTGCTTCTATCGCCATGCTTTTGCCATGATGAGGGATCTAAGATATCTCAAAATCTACAGCACTCATTGTCCTCAAGAATGTGAAAGTGACATTAAATTAAACTTCCCCGAAGGACTCCTGCTACCGTTGAATGAGGTGCGATATCTCCACTGGCTGAAATTCCCGTTAAAAGAAGTTCCACAAGATTTCAACCCGGGTAATTTGGTTGACCTTAAGCTTCCTTATAGCGAGATTGAACGAGTTTGGGAAGATAACAAGGATGCACCAAAATTAAAATGGGTAAACTTAAATCACTCAAAGAAGTTGAACACTTTGGCAGGGTTAGGAAAAGCTCAAAATCTTCAAGAGCTAAATCTTGAAGGTTGCACGGCATTGAAAGAGATGCATGTGGATATGGAAAATATGAAGTTTCTTGTTTTCTTGAACCTGAGAGGATGCACAAGTCTCAAGTCTCTTCCAGAGATTCAGTTGATCTCTTTGAAAACTCTCATCCTCAGTGGCTGCTCAAAATTTAAAACCTTTCAGGTTATTTCAGATAAGCTGGAAGCACTATACTTGGATGGAACTGCAATAAAGGAACTTCCTTGTGACATTGGGAGACTCCAAAGACTTGTTATGTTGAACATGAAAGGCTGCAAGAAGCTGAAAAGGCTCCCTGACAGTCTTGGTCAGCTGAAAGCTCTTGAAGAACTTATCCTCTCTGGTTGTTCAAAGCTCAATGAGTTTCCAGAAACTTGGGGAAACATGAGCCGCTTAGAGATCTTGCTTCTGGATGAGACAGCTATAAAAGATATGCCGAAGATACTCTCCGTGCGTCGTTTATGCTTAAACAAGAATGAAAAGATCAGCCGCCTTCCAGATCTCCTCAATAAATTTTCTCAACTTCAATGGCTTCATTTGAAGTATTGTAAGAATCTTACACATGTTCCACAGCTTCCACCAAATCTTCAGTATTTAAACGTTCATGGTTGTAGCTCACTGAAGACAGTTGCAAAACCGCTGGTATGTTCTATACCGATGAAGCATGTCAATTCCTCGTTCATTTTCACTAACTGCAATGAATTGGAACAAGCTGCAAAGGAGGAAATTGTAGTATATGCTGAAAGGAAGTGTCATTTGCTTGCTAGTGCGCTTAAACGATGCGATGAGAGTTGTGTTCCTGAGATTTTGTTCTGCACTAGCTTTCCTGGATGTGAAATGCCTTCATGGTTTAGTCACGATGCAATTGGATCTATGGTGGAGTTTGAATTACCTCCTCACTGGAATCACAATAGGCTTTCTGGGATAGCCCTATGTGTTGTTGTCTCATTCAAGAACTGTAAAAGTCATGCCAACTTGATAGTCAAGTTCTCTTGTGAGCAAAATAACGGAGAGGGCTCTTCCAGCAGCATTACTTGGAAGGTTGGAAGTTTGATTGAACAAGACAACCAAGAAGAAACAGTTGAATCAGATCATGTCTTTATTGGCTACACCAACTGCTTAGACTTCATAAAACTTGTTAAAGGCCAAGGTGGTCCTAAATGTGCTCCGACCAAAGCATCCCTTGAGTTTAGTGTGAGAACTGGTACTGGTGGGGAAGCTACGCTTGAAGTTTTGAAATCCGGTTTCAGTTTTGTGTTTGAACCTGAAGAGAACAGAGTTCCATCCCCAAGGAATGATGATGTAAAAGGTAAAGTAAAAATCAACAAAACTCCAAGTGCTAATGGTTGTTTCAAGGATCAAGCAAAAGGTAATGAATCTCCAAAGGGCCAGTGGCAGACTTACATTGAAAACTCTAGCACTAACATCCCAAGTGAAGCTCATTCTTCCCAAAAAACTGGGTTTAATGGGTTCAACGGGATGTACTCTGTATGCGTGCTTTATGAAATGTATAGCCATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002218 GO:0002252 GO:0002253 GO:0002376 GO:0002682 GO:0002684 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0008150 GO:0008219 GO:0009314 GO:0009416 GO:0009605 GO:0009607 GO:0009615 GO:0009617 GO:0009626 GO:0009628 GO:0009639 GO:0009870 GO:0009987 GO:0010114 GO:0012501 GO:0012505 GO:0016020 GO:0023052 GO:0031347 GO:0031349 GO:0033554 GO:0034050 GO:0042742 GO:0042802 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0045087 GO:0045088 GO:0045089 GO:0048518 GO:0048583 GO:0048584 GO:0050776 GO:0050778 GO:0050789 GO:0050794 GO:0050896 GO:0051607 GO:0051704 GO:0051707 GO:0051716 GO:0065007 GO:0080134 GO:0098542

KEGG Pathways

Metabolic & Signaling

ko04626 map04626

Pfam Domains

Protein Families

LRR_3 LRR_8 NB-ARC TIR

Protein Analysis

1197

Amino Acids

135.86

Weight (kDa)

8.12

Isoelectric Point (pI)

41.72

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TIR	PF01582	18 - 183	6.9e-42	TIR domain
TIR_2	PF13676	19 - 113	8.6e-13	TIR domain
NB-ARC	PF00931	211 - 379	9e-13	NB-ARC domain
NACHT	PF05729	227 - 375	1.8e-06	NACHT domain
LRR_3	PF07725	638 - 657	2.9e-06	Leucine Rich Repeat
LRR_13	PF23286	729 - 903	2.4e-09	Disease resistance protein RPS4B-like, leucine-rich repeats
LRR_14	PF23598	754 - 901	5.2e-12	Leucine-rich repeat region
C-JID	PF20160	966 - 1060	1.6e-09	C-JID domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0012932)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G17060 AT2G17060 AT3G51570 AT3G51570 AT4G19530 AT4G19530 AT4G36150 AT5G17880 AT5G17880 AT5G44870 AT5G44870 AT5G45060 AT5G45060 AT5G45200 AT5G45200 AT5G45200 AT5G45230 AT5G45250

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1368
Acc16I	TGCGCA	1 cut(s)	86
AccB1I	GGYRCC	1 cut(s)	1617
AccB7I	CCANNNNNTGG	1 cut(s)	1237
AccI	GTMKAC	1 cut(s)	398
AccII	CGCG	1 cut(s)	215
AciI	CCGC	5 cut(s)	578, 1603, 2464, 2563, 2711
AclI	AACGTT	1 cut(s)	2673
AclWI	GGATC	6 cut(s)	140, 218, 1305, 1755, 2950, 3438
AcoI	YGGCCR	1 cut(s)	825
AcsI	RAATTY	5 cut(s)	833, 1171, 1871, 2222, 2585
AcuI	CTGAAG	5 cut(s)	783, 1402, 2645, 2714, 3360
AcvI	CACGTG	1 cut(s)	772
AfaI	GTAC	6 cut(s)	239, 333, 682, 882, 3280, 3557
AfiI	CCNNNNNNNGG	7 cut(s)	18, 710, 1160, 1161, 1166, 1237, 1743
AflII	CTTAAG	1 cut(s)	1925
AflIII	ACRYGT	3 cut(s)	769, 771, 2635
AjnI	CCWGG	3 cut(s)	17, 1318, 2899
Alw21I	GWGCWC	3 cut(s)	306, 627, 3241
Alw26I	GTCTC	9 cut(s)	32, 357, 760, 914, 2162, 2169, 2305, 2483, 3022
AlwI	GGATC	6 cut(s)	140, 218, 1305, 1755, 2950, 3438
AlwNI	CAGNNNCTG	1 cut(s)	2214
Ama87I	CYCGRG	3 cut(s)	917, 1160, 1906
AoxI	GGCC	6 cut(s)	166, 825, 1156, 1465, 3217, 3460
ApeKI	GCWGC	6 cut(s)	887, 1148, 2214, 2346, 2786, 3099
ApoI	RAATTY	5 cut(s)	833, 1171, 1871, 2222, 2585
ArsI	GACNNNNNNTTYG	2 cut(s)	1314, 1346
AseI	ATTAAT	2 cut(s)	63, 1509
Asp700I	GAANNNNTTC	2 cut(s)	1193, 1499
AspLEI	GCGC	3 cut(s)	87, 217, 2845
AspS9I	GGNCC	7 cut(s)	166, 551, 961, 1157, 1466, 3227, 3460
AsuC2I	CCSGG	6 cut(s)	705, 1155, 1161, 1162, 1907, 1908
AsuHPI	GGTGA	4 cut(s)	34, 47, 322, 403
AsuNHI	GCTAGC	1 cut(s)	217
AvaI	CYCGRG	3 cut(s)	917, 1160, 1906
AvaII	GGWCC	3 cut(s)	551, 961, 3227
BalI	TGGCCA	1 cut(s)	827
BanI	GGYRCC	1 cut(s)	1617
BanII	GRGCYC	3 cut(s)	306, 627, 3092
BarI	GAAGNNNNNNTAC	2 cut(s)	636, 668
BauI	CACGAG	2 cut(s)	305, 1490
BbrPI	CACGTG	1 cut(s)	772
BbsI	GAAGAC	3 cut(s)	416, 813, 2702
Bbv12I	GWGCWC	3 cut(s)	306, 627, 3241
BbvI	GCAGC	6 cut(s)	874, 1135, 2201, 2333, 2773, 3111
BccI	CCATC	7 cut(s)	157, 692, 1127, 1457, 1629, 2267, 3364
BceAI	ACGGC	1 cut(s)	2097
BcgI	CGANNNNNNTGC	8 cut(s)	76, 110, 820, 854, 1082, 1116, 1130, 1164
BciT130I	CCWGG	3 cut(s)	19, 1320, 2901
BcnI	CCSGG	6 cut(s)	705, 1155, 1161, 1162, 1907, 1908
BcoDI	GTCTC	9 cut(s)	32, 357, 760, 914, 2162, 2169, 2305, 2483, 3022
BfaI	CTAG	7 cut(s)	218, 641, 1223, 1470, 2838, 2892, 3489
BfmI	CTRYAG	2 cut(s)	1587, 1768
BfrI	CTTAAG	1 cut(s)	1925
BglII	AGATCT	3 cut(s)	1486, 2472, 2572
BisI	GCNGC	9 cut(s)	888, 1149, 1604, 2215, 2347, 2464, 2563, 2787, 3100
BlsI	GCNGC	9 cut(s)	889, 1150, 1605, 2216, 2348, 2465, 2564, 2788, 3101
Bme1390I	CCNGG	9 cut(s)	19, 705, 1155, 1161, 1162, 1320, 1907, 1908, 2901
Bme18I	GGWCC	3 cut(s)	551, 961, 3227
BmeT110I	CYCGRG	3 cut(s)	917, 1160, 1906
BmgT120I	GGNCC	7 cut(s)	166, 551, 961, 1157, 1466, 3227, 3460
BmiI	GGNNCC	4 cut(s)	552, 1159, 1619, 2366
BmrFI	CCNGG	9 cut(s)	19, 705, 1155, 1161, 1162, 1320, 1907, 1908, 2901
BmrI	ACTGGG	2 cut(s)	1282, 3540
BmtI	GCTAGC	1 cut(s)	221
BmuI	ACTGGG	2 cut(s)	1282, 3540
BoxI	GACNNNNGTC	1 cut(s)	926
BpiI	GAAGAC	3 cut(s)	416, 813, 2702
BpmI	CTGGAG	2 cut(s)	128, 1214
BpuEI	CTTGAG	3 cut(s)	1770, 2144, 3278
BpuMI	CCSGG	6 cut(s)	705, 1155, 1161, 1162, 1907, 1908
BsaAI	YACGTR	2 cut(s)	772, 1441
BsaBI	GATNNNNATC	1 cut(s)	317
BsaI	GGTCTC	1 cut(s)	914
BsaJI	CCNNGG	9 cut(s)	18, 70, 233, 1159, 1160, 1560, 1906, 3220, 3362
BsaWI	WCCGGW	1 cut(s)	3314
BsaXI	ACNNNNNCTCC	2 cut(s)	1212, 1242
Bsc4I	CCNNNNNNNGG	7 cut(s)	18, 710, 1160, 1161, 1166, 1237, 1743
Bse118I	RCCGGY	1 cut(s)	458
Bse1I	ACTGG	8 cut(s)	998, 1277, 1868, 2978, 3280, 3286, 3463, 3535
Bse3DI	GCAATG	1 cut(s)	2776
Bse8I	GATNNNNATC	1 cut(s)	317
BseBI	CCWGG	3 cut(s)	19, 1320, 2901
BseDI	CCNNGG	9 cut(s)	18, 70, 233, 1159, 1160, 1560, 1906, 3220, 3362
BseJI	GATNNNNATC	1 cut(s)	317
BseLI	CCNNNNNNNGG	7 cut(s)	18, 710, 1160, 1161, 1166, 1237, 1743
BseMI	GCAATG	1 cut(s)	2776
BseMII	CTCAG	5 cut(s)	755, 1367, 2132, 2221, 2865
BseNI	ACTGG	8 cut(s)	998, 1277, 1868, 2978, 3280, 3286, 3463, 3535
BseRI	GAGGAG	3 cut(s)	4, 2567, 2958
BseXI	GCAGC	6 cut(s)	874, 1135, 2201, 2333, 2773, 3111
BsgI	GTGCAG	2 cut(s)	555, 2872
Bsh1236I	CGCG	1 cut(s)	215
BshFI	GGCC	6 cut(s)	168, 827, 1158, 1467, 3219, 3462
BshNI	GGYRCC	1 cut(s)	1617
BsiHKAI	GWGCWC	3 cut(s)	306, 627, 3241
BsiHKCI	CYCGRG	3 cut(s)	917, 1160, 1906
BsiSI	CCGG	6 cut(s)	459, 705, 1155, 1161, 1907, 3315
BslFI	GGGAC	1 cut(s)	1064
BslI	CCNNNNNNNGG	7 cut(s)	18, 710, 1160, 1161, 1166, 1237, 1743
BsmAI	GTCTC	9 cut(s)	32, 357, 760, 914, 2162, 2169, 2305, 2483, 3022
BsmFI	GGGAC	1 cut(s)	1064
BsmI	GAATGC	1 cut(s)	868
BsnI	GGCC	6 cut(s)	168, 827, 1158, 1467, 3219, 3462
Bso31I	GGTCTC	1 cut(s)	914
BsoBI	CYCGRG	3 cut(s)	917, 1160, 1906
Bsp1286I	GDGCHC	4 cut(s)	306, 627, 3092, 3241
BspACI	CCGC	5 cut(s)	578, 1603, 2464, 2563, 2711
BspANI	GGCC	6 cut(s)	168, 827, 1158, 1467, 3219, 3462
BspCNI	CTCAG	5 cut(s)	756, 1368, 2133, 2220, 2866
BspFNI	CGCG	1 cut(s)	215
BspHI	TCATGA	3 cut(s)	601, 892, 1503
BspLI	GGNNCC	4 cut(s)	552, 1159, 1619, 2366
BspOI	GCTAGC	1 cut(s)	221
BspPI	GGATC	6 cut(s)	140, 218, 1305, 1755, 2950, 3438
BspQI	GCTCTTC	2 cut(s)	981, 3097
BspT107I	GGYRCC	1 cut(s)	1617
BspTI	CTTAAG	1 cut(s)	1925
BspTNI	GGTCTC	1 cut(s)	914
BsrDI	GCAATG	1 cut(s)	2776
BsrFI	RCCGGY	1 cut(s)	458
BsrI	ACTGG	8 cut(s)	998, 1277, 1868, 2978, 3280, 3286, 3463, 3535
BssAI	RCCGGY	1 cut(s)	458
BssECI	CCNNGG	9 cut(s)	18, 70, 233, 1159, 1160, 1560, 1906, 3220, 3362
BssSI	CACGAG	2 cut(s)	305, 1490
BssT1I	CCWWGG	4 cut(s)	233, 1560, 3220, 3362
Bst2BI	CACGAG	2 cut(s)	305, 1490
Bst2UI	CCWGG	3 cut(s)	19, 1320, 2901
Bst4CI	ACNGT	8 cut(s)	35, 346, 1313, 1839, 2375, 2701, 3032, 3154
Bst6I	CTCTTC	5 cut(s)	153, 981, 2172, 3097, 3336
BstAFI	CTTAAG	1 cut(s)	1925
BstBAI	YACGTR	2 cut(s)	772, 1441
BstC8I	GCNNGC	6 cut(s)	219, 270, 1414, 1522, 2835, 3569
BstDEI	CTNAG	8 cut(s)	764, 1376, 1751, 2141, 2207, 2467, 2874, 3193
BstDSI	CCRYGG	1 cut(s)	70
BstFNI	CGCG	1 cut(s)	215
BstHHI	GCGC	3 cut(s)	87, 217, 2845
BstMAI	GTCTC	9 cut(s)	32, 357, 760, 914, 2162, 2169, 2305, 2483, 3022
BstMWI	GCNNNNNNNGC	4 cut(s)	896, 1722, 2362, 3096
BstNI	CCWGG	3 cut(s)	19, 1320, 2901
BstNSI	RCATGY	3 cut(s)	2102, 2639, 2741
BstPAI	GACNNNNGTC	1 cut(s)	926
BstSCI	CCNGG	9 cut(s)	17, 703, 1153, 1159, 1160, 1318, 1905, 1906, 2899
BstSFI	CTRYAG	2 cut(s)	1587, 1768
BstSNI	TACGTA	1 cut(s)	1441
BstUI	CGCG	1 cut(s)	215
BstV1I	GCAGC	6 cut(s)	874, 1135, 2201, 2333, 2773, 3111
BstV2I	GAAGAC	3 cut(s)	416, 813, 2702
BstX2I	RGATCY	5 cut(s)	1486, 1747, 2472, 2572, 2942
BstXI	CCANNNNNNTGG	2 cut(s)	2448, 3530
BstYI	RGATCY	5 cut(s)	1486, 1747, 2472, 2572, 2942
BsuRI	GGCC	6 cut(s)	168, 827, 1158, 1467, 3219, 3462
BtgI	CCRYGG	1 cut(s)	70
BtgZI	GCGATG	2 cut(s)	498, 2871
BtsIMutI	CAGTG	8 cut(s)	342, 1270, 1373, 1861, 2215, 2690, 2971, 3470
Cac8I	GCNNGC	6 cut(s)	219, 270, 1414, 1522, 2835, 3569
CaiI	CAGNNNCTG	1 cut(s)	2214
CciI	TCATGA	3 cut(s)	601, 892, 1503
CfoI	GCGC	3 cut(s)	87, 217, 2845
Cfr10I	RCCGGY	1 cut(s)	458
Cfr13I	GGNCC	7 cut(s)	166, 551, 961, 1157, 1466, 3227, 3460
Cfr9I	CCCGGG	2 cut(s)	1160, 1906
CseI	GACGC	1 cut(s)	2516
Csp6I	GTAC	6 cut(s)	238, 332, 681, 881, 3279, 3556
CviQI	GTAC	6 cut(s)	238, 332, 681, 881, 3279, 3556
DdeI	CTNAG	8 cut(s)	764, 1376, 1751, 2141, 2207, 2467, 2874, 3193
DraI	TTTAAA	2 cut(s)	2227, 2670
EaeI	YGGCCR	1 cut(s)	825
Eam1104I	CTCTTC	5 cut(s)	153, 981, 2172, 3097, 3336
EarI	CTCTTC	5 cut(s)	153, 981, 2172, 3097, 3336
Ecl136II	GAGCTC	2 cut(s)	304, 625
Eco105I	TACGTA	1 cut(s)	1441
Eco130I	CCWWGG	4 cut(s)	233, 1560, 3220, 3362
Eco24I	GRGCYC	3 cut(s)	306, 627, 3092
Eco31I	GGTCTC	1 cut(s)	914
Eco32I	GATATC	3 cut(s)	787, 1757, 1856
Eco47I	GGWCC	3 cut(s)	551, 961, 3227
Eco53kI	GAGCTC	2 cut(s)	304, 625
Eco57I	CTGAAG	5 cut(s)	783, 1402, 2645, 2714, 3360
Eco72I	CACGTG	1 cut(s)	772
Eco88I	CYCGRG	3 cut(s)	917, 1160, 1906
EcoICRI	GAGCTC	2 cut(s)	304, 625
EcoO109I	RGGNCCY	1 cut(s)	551
EcoRII	CCWGG	3 cut(s)	17, 1318, 2899
EcoRV	GATATC	3 cut(s)	787, 1757, 1856
EcoT14I	CCWWGG	4 cut(s)	233, 1560, 3220, 3362
EcoT22I	ATGCAT	3 cut(s)	1294, 1539, 2100
EcoT38I	GRGCYC	3 cut(s)	306, 627, 3092
ErhI	CCWWGG	4 cut(s)	233, 1560, 3220, 3362
FalI	AAGNNNNNCTT	8 cut(s)	350, 382, 1383, 1415, 3240, 3272, 3282, 3314
FaqI	GGGAC	1 cut(s)	1064
FblI	GTMKAC	1 cut(s)	398
Fnu4HI	GCNGC	9 cut(s)	888, 1149, 1604, 2215, 2347, 2464, 2563, 2787, 3100
FriOI	GRGCYC	3 cut(s)	306, 627, 3092
Fsp4HI	GCNGC	9 cut(s)	888, 1149, 1604, 2215, 2347, 2464, 2563, 2787, 3100
FspBI	CTAG	7 cut(s)	218, 641, 1223, 1470, 2838, 2892, 3489
FspI	TGCGCA	1 cut(s)	86
GlaI	GCGC	3 cut(s)	86, 216, 2844
GluI	GCNGC	9 cut(s)	888, 1149, 1604, 2215, 2347, 2464, 2563, 2787, 3100
GsuI	CTGGAG	2 cut(s)	128, 1214
HaeIII	GGCC	6 cut(s)	168, 827, 1158, 1467, 3219, 3462
HapII	CCGG	6 cut(s)	459, 705, 1155, 1161, 1907, 3315
HgaI	GACGC	1 cut(s)	2516
HhaI	GCGC	3 cut(s)	87, 217, 2845
Hin6I	GCGC	3 cut(s)	85, 215, 2843
HinP1I	GCGC	3 cut(s)	85, 215, 2843
HincII	GTYRAC	1 cut(s)	1921
HindII	GTYRAC	1 cut(s)	1921
HindIII	AAGCTT	4 cut(s)	432, 795, 897, 1928
HpaII	CCGG	6 cut(s)	459, 705, 1155, 1161, 1907, 3315
HphI	GGTGA	4 cut(s)	34, 47, 322, 403
Hpy166II	GTNNAC	6 cut(s)	240, 399, 1316, 1495, 1921, 1996
Hpy8I	GTNNAC	6 cut(s)	240, 399, 1316, 1495, 1921, 1996
Hpy99I	CGWCG	1 cut(s)	2532
HpyCH4III	ACNGT	8 cut(s)	35, 346, 1313, 1839, 2375, 2701, 3032, 3154
HpyCH4IV	ACGT	7 cut(s)	541, 598, 655, 771, 1120, 1440, 2673
HpyF10VI	GCNNNNNNNGC	4 cut(s)	896, 1722, 2362, 3096
HpyF3I	CTNAG	8 cut(s)	764, 1376, 1751, 2141, 2207, 2467, 2874, 3193
HpySE526I	ACGT	7 cut(s)	541, 598, 655, 771, 1120, 1440, 2673
HspAI	GCGC	3 cut(s)	85, 215, 2843
LguI	GCTCTTC	2 cut(s)	981, 3097
Lsp1109I	GCAGC	6 cut(s)	874, 1135, 2201, 2333, 2773, 3111
MaeI	CTAG	7 cut(s)	218, 641, 1223, 1470, 2838, 2892, 3489
MaeII	ACGT	7 cut(s)	541, 598, 655, 771, 1120, 1440, 2673
MfeI	CAATTG	1 cut(s)	2937
MflI	RGATCY	5 cut(s)	1486, 1747, 2472, 2572, 2942
MhlI	GDGCHC	4 cut(s)	306, 627, 3092, 3241
MlsI	TGGCCA	1 cut(s)	827
MluNI	TGGCCA	1 cut(s)	827
MlyI	GAGTC	7 cut(s)	84, 254, 884, 1276, 1387, 1821, 2307
MmeI	TCCRAC	4 cut(s)	450, 645, 3097, 3266
Mox20I	TGGCCA	1 cut(s)	827
Mph1103I	ATGCAT	3 cut(s)	1294, 1539, 2100
MroXI	GAANNNNTTC	2 cut(s)	1193, 1499
MscI	TGGCCA	1 cut(s)	827
Msp20I	TGGCCA	1 cut(s)	827
MspA1I	CMGCKG	2 cut(s)	2386, 2713
MspCI	CTTAAG	1 cut(s)	1925
MspI	CCGG	6 cut(s)	459, 705, 1155, 1161, 1907, 3315
MspR9I	CCNGG	9 cut(s)	19, 705, 1155, 1161, 1162, 1320, 1907, 1908, 2901
MunI	CAATTG	1 cut(s)	2937
Mva1269I	GAATGC	1 cut(s)	868
MvaI	CCWGG	3 cut(s)	19, 1320, 2901
MvnI	CGCG	1 cut(s)	215
MwoI	GCNNNNNNNGC	4 cut(s)	896, 1722, 2362, 3096
NciI	CCSGG	6 cut(s)	705, 1155, 1161, 1162, 1907, 1908
NheI	GCTAGC	1 cut(s)	217
NlaIV	GGNNCC	4 cut(s)	552, 1159, 1619, 2366
NmuCI	GTSAC	5 cut(s)	340, 1268, 1799, 2300, 2927
NsbI	TGCGCA	1 cut(s)	86
NsiI	ATGCAT	3 cut(s)	1294, 1539, 2100
NspI	RCATGY	3 cut(s)	2102, 2639, 2741
PaeR7I	CTCGAG	1 cut(s)	917
PagI	TCATGA	3 cut(s)	601, 892, 1503
PciI	ACATGT	1 cut(s)	2635
PciSI	GCTCTTC	2 cut(s)	981, 3097
PctI	GAATGC	1 cut(s)	868
PdmI	GAANNNNTTC	2 cut(s)	1193, 1499
PflFI	GACNNNGTC	2 cut(s)	494, 947
PflMI	CCANNNNNTGG	1 cut(s)	1237
PfoI	TCCNGGA	1 cut(s)	2899
PkrI	GCNGC	9 cut(s)	889, 1150, 1605, 2216, 2348, 2465, 2564, 2788, 3101
PleI	GAGTC	7 cut(s)	83, 253, 883, 1275, 1386, 1821, 2307
PmaCI	CACGTG	1 cut(s)	772
PmlI	CACGTG	1 cut(s)	772
PpsI	GAGTC	7 cut(s)	83, 253, 883, 1275, 1386, 1821, 2307
Ppu21I	YACGTR	2 cut(s)	772, 1441
PpuMI	RGGWCCY	1 cut(s)	551
PscI	ACATGT	1 cut(s)	2635
PshAI	GACNNNNGTC	1 cut(s)	926
PshBI	ATTAAT	2 cut(s)	63, 1509
PsiI	TTATAA	1 cut(s)	1368
Psp124BI	GAGCTC	2 cut(s)	306, 627
Psp1406I	AACGTT	1 cut(s)	2673
Psp5II	RGGWCCY	1 cut(s)	551
Psp6I	CCWGG	3 cut(s)	17, 1318, 2899
PspCI	CACGTG	1 cut(s)	772
PspGI	CCWGG	3 cut(s)	17, 1318, 2899
PspN4I	GGNNCC	4 cut(s)	552, 1159, 1619, 2366
PspPI	GGNCC	7 cut(s)	166, 551, 961, 1157, 1466, 3227, 3460
PspPPI	RGGWCCY	1 cut(s)	551
PstNI	CAGNNNCTG	1 cut(s)	2214
PsuI	RGATCY	5 cut(s)	1486, 1747, 2472, 2572, 2942
PsyI	GACNNNGTC	2 cut(s)	494, 947
PvuII	CAGCTG	1 cut(s)	2386
RsaI	GTAC	6 cut(s)	239, 333, 682, 882, 3280, 3557
RsaNI	GTAC	6 cut(s)	238, 332, 681, 881, 3279, 3556
SacI	GAGCTC	2 cut(s)	306, 627
SapI	GCTCTTC	2 cut(s)	981, 3097
SatI	GCNGC	9 cut(s)	888, 1149, 1604, 2215, 2347, 2464, 2563, 2787, 3100
Sau96I	GGNCC	7 cut(s)	166, 551, 961, 1157, 1466, 3227, 3460
SchI	GAGTC	7 cut(s)	84, 254, 884, 1276, 1387, 1821, 2307
ScrFI	CCNGG	9 cut(s)	19, 705, 1155, 1161, 1162, 1320, 1907, 1908, 2901
SduI	GDGCHC	4 cut(s)	306, 627, 3092, 3241
SfcI	CTRYAG	2 cut(s)	1587, 1768
Sfr274I	CTCGAG	1 cut(s)	917
SinI	GGWCC	3 cut(s)	551, 961, 3227
SlaI	CTCGAG	1 cut(s)	917
SmaI	CCCGGG	2 cut(s)	1162, 1908
SmlI	CTYRAG	5 cut(s)	917, 1785, 1925, 2159, 3257
SmoI	CTYRAG	5 cut(s)	917, 1785, 1925, 2159, 3257
SnaBI	TACGTA	1 cut(s)	1441
SsiI	CCGC	5 cut(s)	578, 1603, 2464, 2563, 2711
SspI	AATATT	1 cut(s)	1513
SspMI	CTAG	7 cut(s)	218, 641, 1223, 1470, 2838, 2892, 3489
SstI	GAGCTC	2 cut(s)	306, 627
StyD4I	CCNGG	9 cut(s)	17, 703, 1153, 1159, 1160, 1318, 1905, 1906, 2899
StyI	CCWWGG	4 cut(s)	233, 1560, 3220, 3362
TaaI	ACNGT	8 cut(s)	35, 346, 1313, 1839, 2375, 2701, 3032, 3154
TaiI	ACGT	7 cut(s)	544, 601, 658, 774, 1123, 1443, 2676
TaqI	TCGA	8 cut(s)	78, 189, 206, 621, 873, 918, 1187, 1573
TatI	WGTACW	1 cut(s)	3555
TauI	GCSGC	3 cut(s)	1606, 2466, 2565
TscAI	CASTG	8 cut(s)	349, 1277, 1380, 1868, 2215, 2697, 2978, 3470
TseFI	GTSAC	5 cut(s)	340, 1268, 1799, 2300, 2927
TseI	GCWGC	6 cut(s)	887, 1148, 2214, 2346, 2786, 3099
Tsp45I	GTSAC	5 cut(s)	340, 1268, 1799, 2300, 2927
TspGWI	ACGGA	8 cut(s)	44, 59, 257, 305, 770, 868, 2512, 3096
TspMI	CCCGGG	2 cut(s)	1160, 1906
TspRI	CASTG	8 cut(s)	349, 1277, 1380, 1868, 2215, 2697, 2978, 3470
Tth111I	GACNNNGTC	2 cut(s)	494, 947
Van91I	CCANNNNNTGG	1 cut(s)	1237
Vha464I	CTTAAG	1 cut(s)	1925
VpaK11BI	GGWCC	3 cut(s)	551, 961, 3227
VspI	ATTAAT	2 cut(s)	63, 1509
XapI	RAATTY	5 cut(s)	833, 1171, 1871, 2222, 2585
XceI	RCATGY	3 cut(s)	2102, 2639, 2741
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1986, 3462
XhoI	CTCGAG	1 cut(s)	917
XmaI	CCCGGG	2 cut(s)	1160, 1906
XmiI	GTMKAC	1 cut(s)	398
XmnI	GAANNNNTTC	2 cut(s)	1193, 1499
XspI	CTAG	7 cut(s)	218, 641, 1223, 1470, 2838, 2892, 3489
Zsp2I	ATGCAT	3 cut(s)	1294, 1539, 2100

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.