AT3G53380

Legume lectin domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
OG0015958
Physical Location & Seq
Reverse (-)
19789038 .. 19791695
2658 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G53380.1

Sequence Viewer

Length: 2148 bp
ATGTCTCTCTTTCTCTCCTTCTTCATTTCAATCTTGCTCTGTTTCTTCAATGGAGCTACGACGACACAGTTTGATTTCTCCACGCTAGCCATAAGCAACCTCAAACTCCTCGGTGATGCACGTTTAAGCAATGGAATCGTTGGCCTCACACGTGACCTCTCTGTACCTAATTCCGGCGCCGGAAAAGTCTTATACTCTAACCCAATCAGATTCCGACAACCTGGAACTCACTTTCCGACAAGCTTCTCTTCTTTTTTCTCCTTCTCTATAACCAATGTCAACCCTTCTTCCATCGGCGGTGGTCTCGCTTTCGTCATCTCTCCCGACGCAAACTCAATCGGCATCGCTGGTGGCTCTCTTGGTCTAACCGGTCCAAACGGTTCCGGTTCAAAATTTGTCGCCGTCGAATTCGATACTTTAATGGATGTAGATTTCAAGGACATTAACAGTAACCATGTTGGATTCGACGTAAATGGCGTAGTTTCCTCTGTTTCCGGTGATCTTGGCACCGTAAACATCGATCTCAAGAGCGGCAACACCATCAATTCATGGATCGAATACGACGGATTGACTCGGGTCTTCAACGTATCAGTCTCTTACTCAAATCTGAAACCGAAAGTTCCAATTTTGTCTTTCCCTCTCGATTTAGATCGATACGTGAACGATTTCATGTTCGTTGGATTCTCCGGGTCAACTCAGGGAAGTACAGAGATTCACAGTATCGAATGGTGGAGCTTCAGTTCATCATTCGGGTCGAGTCTCGGATCCGGATCCGGGTCACCTCCTCCTCGGGCTAATTTGATGAATCCGAAAGCTAATTCGGTGAAATCTCCGCCGCCGTTGGCGTCACAACCGTCGTCTTCAGCGATTCCGATCTCAAGCAACACTCAATTAAAAACTTCGTCGTCGTCGTCTTGCCACAGCCGTTTCTGCAAAGAGAATCCCGGAACAATCGCCGGAGTAGTAACCGCCGGAGCTTTCTTCTTAGCACTATTCGCCGGAGCTTTATTCTGGGTTTACTCCAAAAAGTTCAAACGTGTCGAGAGATCTGATTCATTCGCATCTGAAATCATCAAAGCTCCGAAAGAGTTCAGCTATAAAGAACTCAAAGCCGGCACAAAGAACTTCAACGAGAGTCGTATCATCGGACATGGAGCCTTCGGAGTCGTATACAGAGGAATATTACCGGAGACCGGAGACATCGTCGCCGTCAAACGATGCAGCCATAGCTCACAAGACAAAAAGAACGAGTTTTTATCTGAACTATCAATAATCGGAAGCTTAAGACACAGAAACCTCGTGAGATTACAAGGATGGTGTCACGAGAAAGGTGAGATTTTGTTAGTCTACGATCTAATGCCTAATGGTTCGCTTGATAAAGCTTTGTTTGAGTCACGATTCACGTTACCGTGGGATCATCGGAAAAAGATCTTGCTTGGTGTTGCATCTGCTTTAGCTTATTTACATAGAGAGTGTGAGAATCAGGTGATTCATAGAGATGTTAAGAGTAGTAATATAATGTTAGATGAGAGTTTTAATGCCAAGCTTGGAGATTTCGGATTGGCGAGACAGATTGAGCATGATAAGTCGCCGGAAGCAACTGTTGCCGCCGGGACGATGGGATATTTAGCGCCGGAGTATCTTCTGACGGGTCGTGCTTCGGAGAAGACGGATGTGTTTAGTTACGGAGCGGTGGTTTTGGAAGTGGTTAGTGGAAGAAGACCGATTGAGAAGGACTTAAATGTGCAAAGACATAATGTTGGGGTGAATCCGAATTTAGTAGAATGGGTGTGGGGTTTGTATAAAGAAGGGAAAGTTTCTGCAGCTGCTGATTCTAGGCTTGAAGGTAAGTTTGATGAAGGTGAGATGTGGCGGGTCTTGGTTGTGGGCTTGGCTTGTTCGCATCCGGATCCAGCATTTAGGCCCACTATGAGGTCAGTGGTGCAAATGCTGATTGGTGAGGCTGATGTACCGGTTGTGCCTAAGTCTAGACCCACCATGAGTTTTAGCACTTCGCATTTGTTGCTGAGTTTGCAAGATACTCTCTCTGATTGTAATACCGTGGCTTTGAACTCTAGTCGATCGTCTTCGTGGTCGGTGCCCGAACATAACGTTATCATTCGAAGCGACGATGACCATTTGGTATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Lectin_legB Pkinase

Protein Analysis

715

Amino Acids

77.67

Weight (kDa)

7.0

Isoelectric Point (pI)

36.56

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lectin_legB PF00139 22 - 251 2e-60 Legume lectin domain
Pkinase PF00069 376 - 591 1.4e-52 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 379 - 650 2.2e-46 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0015958)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G53380
fragaria_vesca FvH4_6g15560
malus_domestica MD04G1102000.v1.1 MD12G1121700.v1.1
prunus_persica Prupe.6G239500_v2.0.a1
pyrus_communis pycom04g09730 pycom12g12070
rosa_chinensis RchiOBHm_Chr3g0469121
rosa_laevigata RLG00000024371
rosa_multiflora Rmu_sc0000302.1_g000014 Rmu_sc0007933.1_g000020
rosa_roxburghii Rroxscaffold_6G00412190
rosa_rugosa Rorug03G0099900
rosa_samantha Rh3AG148900
rosa_wichuraiana Rw3G014050

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 3 cut(s) 176, 506, 2098
AccBSI CCGCTC 2 cut(s) 531, 1691
AccI GTMKAC 2 cut(s) 1170, 1347
AccIII TCCGGA 2 cut(s) 767, 1906
AciI CCGC 8 cut(s) 297, 531, 833, 836, 969, 1608, 1691, 1873
AclI AACGTT 1 cut(s) 2112
AclWI GGATC 8 cut(s) 560, 759, 765, 772, 778, 1422, 1904, 1917
AcsI RAATTY 3 cut(s) 392, 407, 1774
AcuI CTGAAG 2 cut(s) 721, 846
AcvI CACGTG 1 cut(s) 152
AcyI GRCGYC 2 cut(s) 177, 845
AfaI GTAC 3 cut(s) 165, 706, 1971
AfiI CCNNNNNNNGG 4 cut(s) 173, 774, 1193, 1932
AflII CTTAAG 1 cut(s) 1282
AflIII ACRYGT 2 cut(s) 149, 1036
AgeI ACCGGT 2 cut(s) 368, 1972
AgsI TTSAA 9 cut(s) 30, 49, 390, 436, 583, 1033, 1129, 1844, 2071
AjnI CCWGG 1 cut(s) 220
AloI GAACNNNNNNTCC 4 cut(s) 217, 249, 724, 756
Alw26I GTCTC 7 cut(s) 9, 308, 598, 764, 1184, 1191, 1561
AlwI GGATC 8 cut(s) 560, 759, 765, 772, 778, 1422, 1904, 1917
AlwNI CAGNNNCTG 1 cut(s) 1829
Ama87I CYCGRG 2 cut(s) 573, 789
Aor13HI TCCGGA 2 cut(s) 767, 1906
AoxI GGCC 2 cut(s) 142, 1922
ApeKI GCWGC 3 cut(s) 1221, 1823, 1826
ApoI RAATTY 3 cut(s) 392, 407, 1774
AsiGI ACCGGT 2 cut(s) 368, 1972
Asp700I GAANNNNTTC 2 cut(s) 665, 1088
AspLEI GCGC 2 cut(s) 179, 1633
AspS9I GGNCC 2 cut(s) 371, 1923
AsuC2I CCSGG 4 cut(s) 688, 775, 945, 1612
AsuHPI GGTGA 9 cut(s) 125, 509, 771, 835, 1343, 1498, 1777, 1874, 1970
AsuII TTCGAA 1 cut(s) 2122
AsuNHI GCTAGC 1 cut(s) 85
AvaI CYCGRG 2 cut(s) 573, 789
AvaII GGWCC 1 cut(s) 371
BaeGI GKGCMC 1 cut(s) 2103
BamHI GGATCC 3 cut(s) 764, 770, 1909
BanI GGYRCC 3 cut(s) 176, 506, 2098
BauI CACGAG 2 cut(s) 1298, 1322
BbrPI CACGTG 1 cut(s) 152
BbsI GAAGAC 5 cut(s) 571, 852, 1673, 1726, 2079
BbvI GCAGC 3 cut(s) 1233, 1813, 1835
BccI CCATC 4 cut(s) 299, 548, 1308, 1612
BceAI ACGGC 4 cut(s) 386, 823, 909, 1193
BcgI CGANNNNNNTGC 2 cut(s) 118, 152
BciT130I CCWGG 1 cut(s) 222
BcnI CCSGG 4 cut(s) 688, 775, 945, 1612
BcoDI GTCTC 7 cut(s) 9, 308, 598, 764, 1184, 1191, 1561
BfaI CTAG 4 cut(s) 86, 1836, 1989, 2076
BfmI CTRYAG 1 cut(s) 1821
BfoI RGCGCY 2 cut(s) 180, 1634
BfrI CTTAAG 1 cut(s) 1282
BglII AGATCT 2 cut(s) 1046, 1428
BisI GCNGC 6 cut(s) 532, 836, 1222, 1608, 1824, 1827
BlsI GCNGC 6 cut(s) 533, 837, 1223, 1609, 1825, 1828
Bme1390I CCNGG 5 cut(s) 222, 688, 775, 945, 1612
Bme18I GGWCC 1 cut(s) 371
BmeT110I CYCGRG 2 cut(s) 573, 789
BmgT120I GGNCC 2 cut(s) 371, 1923
BmiI GGNNCC 8 cut(s) 178, 382, 508, 766, 772, 1156, 1911, 2100
BmrFI CCNGG 5 cut(s) 222, 688, 775, 945, 1612
BmsI GCATC 6 cut(s) 106, 351, 1070, 1208, 1454, 1912
BmtI GCTAGC 1 cut(s) 89
BoxI GACNNNNGTC 1 cut(s) 575
BpiI GAAGAC 5 cut(s) 571, 852, 1673, 1726, 2079
Bpu14I TTCGAA 1 cut(s) 2122
BpuEI CTTGAG 2 cut(s) 509, 862
BpuMI CCSGG 4 cut(s) 688, 775, 945, 1612
Bsa29I ATCGAT 2 cut(s) 519, 652
BsaAI YACGTR 2 cut(s) 152, 658
BsaBI GATNNNNATC 3 cut(s) 648, 769, 872
BsaHI GRCGYC 2 cut(s) 177, 845
BsaI GGTCTC 2 cut(s) 308, 1184
BsaJI CCNNGG 4 cut(s) 109, 788, 1409, 2061
BsaWI WCCGGW 8 cut(s) 368, 383, 494, 767, 1186, 1193, 1906, 1972
BsaXI ACNNNNNCTCC 6 cut(s) 724, 754, 1188, 1218, 1680, 1710
Bsc4I CCNNNNNNNGG 4 cut(s) 173, 774, 1193, 1932
Bse118I RCCGGY 3 cut(s) 368, 1112, 1972
Bse3DI GCAATG 1 cut(s) 136
Bse8I GATNNNNATC 3 cut(s) 648, 769, 872
BseAI TCCGGA 2 cut(s) 767, 1906
BseBI CCWGG 1 cut(s) 222
BseCI ATCGAT 2 cut(s) 519, 652
BseDI CCNNGG 4 cut(s) 109, 788, 1409, 2061
BseGI GGATG 4 cut(s) 430, 1319, 1678, 1903
BseJI GATNNNNATC 3 cut(s) 648, 769, 872
BseLI CCNNNNNNNGG 4 cut(s) 173, 774, 1193, 1932
BseMI GCAATG 1 cut(s) 136
BseMII CTCAG 2 cut(s) 710, 2018
BseRI GAGGAG 3 cut(s) 98, 774, 777
BseSI GKGCMC 1 cut(s) 2103
BseXI GCAGC 3 cut(s) 1233, 1813, 1835
Bsh1285I CGRYCG 1 cut(s) 2084
BshFI GGCC 2 cut(s) 144, 1924
BshNI GGYRCC 3 cut(s) 176, 506, 2098
BshTI ACCGGT 2 cut(s) 368, 1972
BshVI ATCGAT 2 cut(s) 519, 652
BsiEI CGRYCG 1 cut(s) 2084
BsiHKCI CYCGRG 2 cut(s) 573, 789
BslFI GGGAC 1 cut(s) 1627
BslI CCNNNNNNNGG 4 cut(s) 173, 774, 1193, 1932
BsmAI GTCTC 7 cut(s) 9, 308, 598, 764, 1184, 1191, 1561
BsmFI GGGAC 1 cut(s) 1627
BsnI GGCC 2 cut(s) 144, 1924
Bso31I GGTCTC 2 cut(s) 308, 1184
BsoBI CYCGRG 2 cut(s) 573, 789
Bsp119I TTCGAA 1 cut(s) 2122
Bsp1286I GDGCHC 1 cut(s) 2103
Bsp13I TCCGGA 2 cut(s) 767, 1906
BspACI CCGC 8 cut(s) 297, 531, 833, 836, 969, 1608, 1691, 1873
BspANI GGCC 2 cut(s) 144, 1924
BspCNI CTCAG 2 cut(s) 709, 2019
BspDI ATCGAT 2 cut(s) 519, 652
BspEI TCCGGA 2 cut(s) 767, 1906
BspLI GGNNCC 8 cut(s) 178, 382, 508, 766, 772, 1156, 1911, 2100
BspMAI CTGCAG 1 cut(s) 1825
BspOI GCTAGC 1 cut(s) 89
BspPI GGATC 8 cut(s) 560, 759, 765, 772, 778, 1422, 1904, 1917
BspT104I TTCGAA 1 cut(s) 2122
BspT107I GGYRCC 3 cut(s) 176, 506, 2098
BspTI CTTAAG 1 cut(s) 1282
BspTNI GGTCTC 2 cut(s) 308, 1184
BsrBI CCGCTC 2 cut(s) 531, 1691
BsrDI GCAATG 1 cut(s) 136
BsrFI RCCGGY 3 cut(s) 368, 1112, 1972
BssAI RCCGGY 3 cut(s) 368, 1112, 1972
BssECI CCNNGG 4 cut(s) 109, 788, 1409, 2061
BssNAI GTATAC 1 cut(s) 1171
BssNI GRCGYC 2 cut(s) 177, 845
BssSI CACGAG 2 cut(s) 1298, 1322
Bst1107I GTATAC 1 cut(s) 1171
Bst2BI CACGAG 2 cut(s) 1298, 1322
Bst2UI CCWGG 1 cut(s) 222
Bst4CI ACNGT 9 cut(s) 69, 380, 449, 511, 719, 855, 1410, 1603, 2062
Bst6I CTCTTC 1 cut(s) 253
BstACI GRCGYC 2 cut(s) 177, 845
BstAFI CTTAAG 1 cut(s) 1282
BstAPI GCANNNNNTGC 2 cut(s) 1604, 2023
BstBAI YACGTR 2 cut(s) 152, 658
BstBI TTCGAA 1 cut(s) 2122
BstC8I GCNNGC 2 cut(s) 87, 1114
BstDEI CTNAG 4 cut(s) 696, 985, 1983, 2027
BstDSI CCRYGG 2 cut(s) 1409, 2061
BstEII GGTNACC 1 cut(s) 777
BstF5I GGATG 4 cut(s) 430, 1319, 1678, 1903
BstH2I RGCGCY 2 cut(s) 180, 1634
BstHHI GCGC 2 cut(s) 179, 1633
BstMAI GTCTC 7 cut(s) 9, 308, 598, 764, 1184, 1191, 1561
BstMCI CGRYCG 1 cut(s) 2084
BstMWI GCNNNNNNNGC 6 cut(s) 930, 995, 1227, 1604, 2023, 2032
BstNI CCWGG 1 cut(s) 222
BstPAI GACNNNNGTC 1 cut(s) 575
BstPI GGTNACC 1 cut(s) 777
BstSCI CCNGG 5 cut(s) 220, 686, 773, 943, 1610
BstSFI CTRYAG 1 cut(s) 1821
BstSLI GKGCMC 1 cut(s) 2103
BstV1I GCAGC 3 cut(s) 1233, 1813, 1835
BstV2I GAAGAC 5 cut(s) 571, 852, 1673, 1726, 2079
BstX2I RGATCY 5 cut(s) 764, 770, 1046, 1428, 1909
BstYI RGATCY 5 cut(s) 764, 770, 1046, 1428, 1909
BstZ17I GTATAC 1 cut(s) 1171
Bsu15I ATCGAT 2 cut(s) 519, 652
BsuRI GGCC 2 cut(s) 144, 1924
BsuTUI ATCGAT 2 cut(s) 519, 652
BtgI CCRYGG 2 cut(s) 1409, 2061
BtgZI GCGATG 1 cut(s) 328
BtsCI GGATG 4 cut(s) 430, 1319, 1678, 1903
BtsIMutI CAGTG 1 cut(s) 1944
Cac8I GCNNGC 2 cut(s) 87, 1114
CaiI CAGNNNCTG 1 cut(s) 1829
CfoI GCGC 2 cut(s) 179, 1633
Cfr10I RCCGGY 3 cut(s) 368, 1112, 1972
Cfr13I GGNCC 2 cut(s) 371, 1923
ClaI ATCGAT 2 cut(s) 519, 652
CseI GACGC 2 cut(s) 335, 834
Csp6I GTAC 3 cut(s) 164, 705, 1970
CspAI ACCGGT 2 cut(s) 368, 1972
CviAII CATG 6 cut(s) 455, 549, 670, 1151, 1580, 1999
CviQI GTAC 3 cut(s) 164, 705, 1970
DdeI CTNAG 4 cut(s) 696, 985, 1983, 2027
DinI GGCGCC 1 cut(s) 178
Eam1104I CTCTTC 1 cut(s) 253
EarI CTCTTC 1 cut(s) 253
EciI GGCGGA 1 cut(s) 822
Eco31I GGTCTC 2 cut(s) 308, 1184
Eco47I GGWCC 1 cut(s) 371
Eco57I CTGAAG 2 cut(s) 721, 846
Eco72I CACGTG 1 cut(s) 152
Eco88I CYCGRG 2 cut(s) 573, 789
Eco91I GGTNACC 1 cut(s) 777
EcoO65I GGTNACC 1 cut(s) 777
EcoRI GAATTC 1 cut(s) 407
EcoRII CCWGG 1 cut(s) 220
EgeI GGCGCC 1 cut(s) 178
EheI GGCGCC 1 cut(s) 178
FaeI CATG 6 cut(s) 458, 552, 673, 1154, 1583, 2002
FalI AAGNNNNNCTT 2 cut(s) 232, 264
FaqI GGGAC 1 cut(s) 1627
FatI CATG 6 cut(s) 454, 548, 669, 1150, 1579, 1998
FauI CCCGC 1 cut(s) 1866
FblI GTMKAC 2 cut(s) 1170, 1347
Fnu4HI GCNGC 6 cut(s) 532, 836, 1222, 1608, 1824, 1827
FokI GGATG 4 cut(s) 437, 1326, 1685, 1890
Fsp4HI GCNGC 6 cut(s) 532, 836, 1222, 1608, 1824, 1827
FspBI CTAG 4 cut(s) 86, 1836, 1989, 2076
GlaI GCGC 2 cut(s) 178, 1632
GluI GCNGC 6 cut(s) 532, 836, 1222, 1608, 1824, 1827
HaeII RGCGCY 2 cut(s) 180, 1634
HaeIII GGCC 2 cut(s) 144, 1924
HgaI GACGC 2 cut(s) 335, 834
HhaI GCGC 2 cut(s) 179, 1633
Hin1I GRCGYC 2 cut(s) 177, 845
Hin1II CATG 6 cut(s) 458, 552, 673, 1154, 1583, 2002
Hin6I GCGC 2 cut(s) 177, 1631
HinP1I GCGC 2 cut(s) 177, 1631
HincII GTYRAC 2 cut(s) 280, 693
HindII GTYRAC 2 cut(s) 280, 693
HindIII AAGCTT 4 cut(s) 241, 1279, 1380, 1544
HphI GGTGA 9 cut(s) 125, 509, 771, 835, 1343, 1498, 1777, 1874, 1970
Hpy166II GTNNAC 7 cut(s) 280, 514, 661, 693, 1018, 1171, 1348
Hpy8I GTNNAC 7 cut(s) 280, 514, 661, 693, 1018, 1171, 1348
HpyAV CCTTC 8 cut(s) 28, 271, 294, 1168, 1726, 1802, 1838, 1853
HpyCH4III ACNGT 9 cut(s) 69, 380, 449, 511, 719, 855, 1410, 1603, 2062
HpyCH4IV ACGT 8 cut(s) 121, 151, 468, 585, 657, 1036, 1403, 2112
HpyCH4V TGCA 8 cut(s) 119, 933, 1221, 1445, 1747, 1823, 1945, 2035
HpyF10VI GCNNNNNNNGC 6 cut(s) 930, 995, 1227, 1604, 2023, 2032
HpyF3I CTNAG 4 cut(s) 696, 985, 1983, 2027
HpySE526I ACGT 8 cut(s) 121, 151, 468, 585, 657, 1036, 1403, 2112
Hsp92I GRCGYC 2 cut(s) 177, 845
Hsp92II CATG 6 cut(s) 458, 552, 673, 1154, 1583, 2002
HspAI GCGC 2 cut(s) 177, 1631
KasI GGCGCC 1 cut(s) 176
Kpn2I TCCGGA 2 cut(s) 767, 1906
KroI GCCGGC 1 cut(s) 1112
KroNI GCCGGC 1 cut(s) 1114
LmnI GCTCC 7 cut(s) 53, 732, 974, 1001, 1084, 1154, 1688
Lsp1109I GCAGC 3 cut(s) 1233, 1813, 1835
LweI GCATC 6 cut(s) 106, 351, 1070, 1208, 1454, 1912
MaeI CTAG 4 cut(s) 86, 1836, 1989, 2076
MaeII ACGT 8 cut(s) 121, 151, 468, 585, 657, 1036, 1403, 2112
MaeIII GTNAC 9 cut(s) 152, 449, 777, 846, 964, 1319, 1392, 1404, 1682
MbiI CCGCTC 2 cut(s) 531, 1691
MflI RGATCY 5 cut(s) 764, 770, 1046, 1428, 1909
MhlI GDGCHC 1 cut(s) 2103
MluCI AATT 9 cut(s) 169, 392, 407, 544, 624, 796, 817, 890, 1774
Mly113I GGCGCC 1 cut(s) 177
MlyI GAGTC 5 cut(s) 565, 766, 1144, 1173, 1400
MmeI TCCRAC 4 cut(s) 238, 260, 439, 658
MroI TCCGGA 2 cut(s) 767, 1906
MroNI GCCGGC 1 cut(s) 1112
MroXI GAANNNNTTC 2 cut(s) 665, 1088
MseI TTAA 8 cut(s) 125, 419, 444, 893, 1283, 1503, 1536, 1739
MslI CAYNNNNRTG 1 cut(s) 1497
MspA1I CMGCKG 1 cut(s) 1826
MspCI CTTAAG 1 cut(s) 1282
MspR9I CCNGG 5 cut(s) 222, 688, 775, 945, 1612
MvaI CCWGG 1 cut(s) 222
MwoI GCNNNNNNNGC 6 cut(s) 930, 995, 1227, 1604, 2023, 2032
NaeI GCCGGC 1 cut(s) 1114
NarI GGCGCC 1 cut(s) 177
NciI CCSGG 4 cut(s) 688, 775, 945, 1612
NgoMIV GCCGGC 1 cut(s) 1112
NheI GCTAGC 1 cut(s) 85
NlaIII CATG 6 cut(s) 458, 552, 673, 1154, 1583, 2002
NlaIV GGNNCC 8 cut(s) 178, 382, 508, 766, 772, 1156, 1911, 2100
NmuCI GTSAC 5 cut(s) 152, 777, 846, 1319, 1392
NspV TTCGAA 1 cut(s) 2122
PcsI WCGNNNNNNNCGW 3 cut(s) 474, 863, 908
PdiI GCCGGC 1 cut(s) 1114
PdmI GAANNNNTTC 2 cut(s) 665, 1088
PflFI GACNNNGTC 1 cut(s) 1202
PfoI TCCNGGA 1 cut(s) 943
PinAI ACCGGT 2 cut(s) 368, 1972
PkrI GCNGC 6 cut(s) 533, 837, 1223, 1609, 1825, 1828
Ple19I CGATCG 1 cut(s) 2084
PleI GAGTC 5 cut(s) 565, 765, 1143, 1172, 1399
PluTI GGCGCC 1 cut(s) 180
PmaCI CACGTG 1 cut(s) 152
PmlI CACGTG 1 cut(s) 152
PpsI GAGTC 5 cut(s) 565, 765, 1143, 1172, 1399
Ppu21I YACGTR 2 cut(s) 152, 658
PshAI GACNNNNGTC 1 cut(s) 575
Psp1406I AACGTT 1 cut(s) 2112
Psp6I CCWGG 1 cut(s) 220
PspCI CACGTG 1 cut(s) 152
PspEI GGTNACC 1 cut(s) 777
PspGI CCWGG 1 cut(s) 220
PspN4I GGNNCC 8 cut(s) 178, 382, 508, 766, 772, 1156, 1911, 2100
PspPI GGNCC 2 cut(s) 371, 1923
PstI CTGCAG 1 cut(s) 1825
PstNI CAGNNNCTG 1 cut(s) 1829
PsuI RGATCY 5 cut(s) 764, 770, 1046, 1428, 1909
PsyI GACNNNGTC 1 cut(s) 1202
PvuI CGATCG 1 cut(s) 2084
PvuII CAGCTG 1 cut(s) 1826
RsaI GTAC 3 cut(s) 165, 706, 1971
RsaNI GTAC 3 cut(s) 164, 705, 1970
RseI CAYNNNNRTG 1 cut(s) 1497
SaqAI TTAA 8 cut(s) 125, 419, 444, 893, 1283, 1503, 1536, 1739
SatI GCNGC 6 cut(s) 532, 836, 1222, 1608, 1824, 1827
Sau96I GGNCC 2 cut(s) 371, 1923
SchI GAGTC 5 cut(s) 565, 766, 1144, 1173, 1400
ScrFI CCNGG 5 cut(s) 222, 688, 775, 945, 1612
SduI GDGCHC 1 cut(s) 2103
SfaNI GCATC 6 cut(s) 106, 351, 1070, 1208, 1454, 1912
SfcI CTRYAG 1 cut(s) 1821
SfoI GGCGCC 1 cut(s) 178
SfuI TTCGAA 1 cut(s) 2122
SinI GGWCC 1 cut(s) 371
SmiMI CAYNNNNRTG 1 cut(s) 1497
SmlI CTYRAG 3 cut(s) 524, 877, 1282
SmoI CTYRAG 3 cut(s) 524, 877, 1282
Sse9I AATT 9 cut(s) 169, 392, 407, 544, 624, 796, 817, 890, 1774
SsiI CCGC 8 cut(s) 297, 531, 833, 836, 969, 1608, 1691, 1873
SspDI GGCGCC 1 cut(s) 176
SspI AATATT 1 cut(s) 1182
SspMI CTAG 4 cut(s) 86, 1836, 1989, 2076
StyD4I CCNGG 5 cut(s) 220, 686, 773, 943, 1610
TaaI ACNGT 9 cut(s) 69, 380, 449, 511, 719, 855, 1410, 1603, 2062
TaiI ACGT 8 cut(s) 124, 154, 471, 588, 660, 1039, 1406, 2115
TaqII GACCGA 1 cut(s) 1738
TasI AATT 9 cut(s) 169, 392, 407, 544, 624, 796, 817, 890, 1774
TatI WGTACW 1 cut(s) 704
TauI GCSGC 3 cut(s) 534, 838, 1610
Tru1I TTAA 8 cut(s) 125, 419, 444, 893, 1283, 1503, 1536, 1739
Tru9I TTAA 8 cut(s) 125, 419, 444, 893, 1283, 1503, 1536, 1739
TscAI CASTG 1 cut(s) 1944
TseFI GTSAC 5 cut(s) 152, 777, 846, 1319, 1392
TseI GCWGC 3 cut(s) 1221, 1823, 1826
Tsp45I GTSAC 5 cut(s) 152, 777, 846, 1319, 1392
TspDTI ATGAA 8 cut(s) 13, 537, 658, 732, 818, 1044, 1481, 1872
TspGWI ACGGA 3 cut(s) 579, 1685, 1701
TspRI CASTG 1 cut(s) 1944
Tth111I GACNNNGTC 1 cut(s) 1202
Vha464I CTTAAG 1 cut(s) 1282
VpaK11BI GGWCC 1 cut(s) 371
XapI RAATTY 3 cut(s) 392, 407, 1774
XbaI TCTAGA 1 cut(s) 1988
XmiI GTMKAC 2 cut(s) 1170, 1347
XmnI GAANNNNTTC 2 cut(s) 665, 1088
XspI CTAG 4 cut(s) 86, 1836, 1989, 2076
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.