Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0008427

Physical Location & Seq

Genomic Coordinates Reverse (-)

21810238 .. 21817699

Gene Structure 7462 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G59020.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3090 bp

ATGGATCTGCCTAGCCTCGCTTTAATCGTTGGCGCGGCTGCTTTCAGTCCCAATCCTGACGAGCGCAGAGCTGCTGAGCAGAGCCTTAATCAGTTGCAGCACACTCCACAGCATTTGATAAGGATATTGCAAATAATTGTTGATGGTGGCTCTGATCTTTCTGTACGCCAATCTGCTAGTATCCATTTCAAGAATTTCATTGCTAAGCACTGGGAACCTCATTCTGGTGACCAGAACATAATCTTGCCAAGTGATAAGAATGTTGTCAGGAACCAGATTCTTGTATTTGTCTCTCAAGTGCCCCCGATTTTGAGAGTTCAGATGGGAGAGTGCCTGAAGACCATAATTTACGCTGACTATCCTGAGCAATGGCCCGAACTCCTGGACTGGGTGAAGCAAAACTTGCAAAAACCACAAGTTTATGGAGCGCTATTTGTCTTGAGGATACTATCTTCAAAATACGAGTTTAAGTCAGATGAAGATAGGGCACCCATTCACCGAGTAGTCGAGGAGACTTTTCCCCACCTGTTGAACATATTTAACAATCTTGTCCATGTTGAAAATCCTTCTCTCGAAGTGGCAGACCATATCAAGCTTATTTGCAAGATATTCTGGTCATGTATTTATCTAGAGCTTCCGAGACCATTGTTTGATCCAAACTTTTTTAATGCTTGGATGGGTCTGTTCCTAAACATTTTGGAACGTCCTGTTCCCGTAGAAGGCCAGCCTGAAGACCCTGAGCTTAGAAAATCCTGGGGATGGTGGAAGGCCAAGAAGTGGATTGCTCATATCTTAAACAGGCTATACACTCGGTTTGGAGATCTGAAACTCCAGAATCCAGATAACAAAGCCTTTGCTCAAATGTTCCAGATAAACTATGCAGCCAAGATATTAGAGTGCCACCTGAAATTGTTGAATGCCATTCGTATAGGTGGATATCTTCCGGATAGAGTCATCAACCTAATTCTTCAATATCTAAGCAACAGTATCTCGAAGAGTAGCATGTACAACTTACTGCAGCCCCACCTTAACACTCTCCTATTTGAAATAGTTTTCCCACTTATGTGTTTCAATGATAATGATCAAATGCTTTGGGATGAAGACCCGCATGAGTATGTAAGGAAGGGTTATGATATAATTGAAGATTTATACAGTCCCAGGACTGCGTCTATGGACTTTGTGACTGAGCTGGTCAGAAAGCGTGGAAAAGAAAACTTCCCAAAATTTATACAGTTCGTTGTGGACATTTTTAAGAGATATAATGAAGCATCTCTGGAAAACAAGCCTTATCGCCTTAAGGATGGTGCTCTGCTTGCTGTTGGGACACTTTGTGATAAACTTAGGCAAACTGAACCCTACAAATCTGAGCTGGAGAATATGTTAGTGCAACATGTTTTTCCTGAATTTAGCAGCCCAGCTGGTCATCTTAGAGCTAAGGCTGCGTGGGTTGCAGGGCAGTACGCCAATATCGATTTCTCAGACCAGAGCAATTTTTCAAAGGCATTGCATTGTGTTATCTCCGGAATGTGTGATCTAGAACTTCCTGTTCGGGTGGATTCAGTTTTTGCTTTGCGTTCATTTATTGAAGCCTGCAAAGATTTAGATGAAATCCGCCCAGTTCTTCCTCAACTTCTTGATGAATTTTTCAAGCTAATGAAGGAAGTTGAAAACGAAGACCTTGCTTTTACATTAGAGACTATTGTGTATAAGTTTGGAGAGGAGATTTCTCCGTATGCTTTGGGTTTGTGCCAAAACTTGGCCAGTGCTTTCTGGAGGTGTATCGACACTGACAACGGTGATGATGAAACTGATGATGCTGGTGCATTGGCTGCAGTGGGATGTCTCCGTGCCATCAGTACCATTCTTGAATCTATCAGTAGTCTCCCTCATCTTTATGGTCAGATTGAACCACAGTTACTGCCAATAATGCGGAAAATGCTGACAACTGATGGTCAAGATGTGTTTGAAGAGGTTCTGGAGATCGTCTCATATATTACTACTTTTTCACCTACAATATCATTGGAGATGTGGAGTCTATGGCCTTTAATGATGGAAGCACTCGTGGATTGGGCTATTGACTTTTTCCCAAATATATTGGTCCCGTTGCACAACTATATATCCAGGGGGACTGGGCATTATCTTACTTGCAAGGAACCAGATTACCAGCAAAATCTTTGGAATGTGATATCTGTGCTTATGGCGAATAAAAATATTGATGACAGTGACCTCGAGCCAGCTCCGAAGCTATTAGGGATAGTGCTTCAGACATGCAAGGGCCAGGTGGATCAATGGGTAGAACCCTACCTGAGAATCACACTTGATCGGCTACGCGGTGCTGAGAAATCTTCCTTCAAGTGCCTTCTGGTTGAAGTGGTTGCAAATGCCTTTTACTACAATACCCCTTTGGCACTTGGCATACTGCAACGATTTGGTATCGCAACAGAAATTTTTACTCTATGGTTCCAAATGCTGCAAGAAAAGAAGAAGAGTGGTGCACGTTCTAACTTCAAGAGAGAACATGATAAGAAAGTTTGCATCTTGGGGTTGACATCACTTTTCAGCCTTCCAGCTGGTCAATTGCCTGGAGAGGTCTTGCCACATGTATTCAGGGCTCTTCTCGAGCTTTTAGTGGCATACAAGGATCAACTTGCTGCGGCAAAGGCAGAAGAGGAAGAAGAAGATGAAGATGGTGATGATGACGACATGGATGAATTCCAAACAGATGATGAAGATGAGGACGGCGATGACGAGAATCCAGATGAAACTGATGGAAGTACACTCCGCAAGTTAGCAGCACAGGCAAAGGACTTCCGCTCTTACAGCGATGATGATGACTTTTCAGACGATGATTTTAGCGATGACGAGGAATTAGAATCTCCAATTGATGAAGTGGATCCTTTCGTACTCTTCATGGATGCAGTCACAGCAATGCAAGTATCAGACTCGCCAAGGTTCCAAAGCCTTACCCAGACACTAGACCCGCACTACCATGGACTCGCAAGCACAATAGCTCAACACACGGAGCTGAGAAGAGCAGAGATTCTAAAGGAGAAACTTGAGAAGCAATCTTCTGCAACGGTTGCTTCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005737 GO:0005829 GO:0006606 GO:0006810 GO:0006886 GO:0006913 GO:0007154 GO:0007165 GO:0008104 GO:0008150 GO:0008565 GO:0009892 GO:0009987 GO:0010468 GO:0010605 GO:0010608 GO:0010629 GO:0012505 GO:0015031 GO:0015833 GO:0016043 GO:0016441 GO:0016458 GO:0017038 GO:0019222 GO:0022607 GO:0022613 GO:0022618 GO:0023052 GO:0031047 GO:0031967 GO:0031975 GO:0033036 GO:0033365 GO:0034504 GO:0034613 GO:0034622 GO:0035194 GO:0035195 GO:0035280 GO:0040029 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043933 GO:0044085 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0045184 GO:0046907 GO:0048519 GO:0050789 GO:0050794 GO:0050896 GO:0051169 GO:0051170 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0051716 GO:0060255 GO:0065003 GO:0065007 GO:0070727 GO:0070922 GO:0071702 GO:0071705 GO:0071826 GO:0071840 GO:0072594

KEGG Pathways

Metabolic & Signaling

ko04013 map04013

Pfam Domains

Protein Families

Cse1 IBN_N

Protein Analysis

1029

Amino Acids

117.64

Weight (kDa)

4.75

Isoelectric Point (pI)

48.62

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
IBN_N	PF03810	25 - 96	3.1e-17	Importin-beta N-terminal domain
Cse1	PF08506	153 - 437	4.2e-09	Cse1
TPR_IPO11	PF25758	631 - 920	1.4e-06	Importin-11-like, TPR repeats

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0008427)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G31660 AT3G59020 AT3G59020
fragaria_vesca	FvH4_4g12200
malus_domestica	MD00G1128300.v1.1 MD04G1028800.v1.1
prunus_persica	Prupe.1G180500_v2.0.a1 Prupe.1G180500_v2.0.a1 Prupe.1G180500_v2.0.a1
pyrus_communis	pycom04g02510 pycom04g02520 pycom13g29470
rosa_chinensis	RchiOBHm_Chr4g0409961
rosa_laevigata	RLG00000008510
rosa_multiflora	Rmu_sc0000365.1_g000108 Rmu_sc0000987.1_g000001
rosa_roxburghii	Rroxscaffold_5G00354450
rosa_rugosa	Rorug04G0099700
rosa_samantha	Rh4AG158700 Rh4BG158100 Rh4CG169500 Rh4DG153600
rosa_wichuraiana	Rw4G013100

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	487
AccB7I	CCANNNNNTGG	2 cut(s)	777, 1756
AccBSI	CCGCTC	1 cut(s)	2814
AccII	CGCG	2 cut(s)	35, 2331
AccIII	TCCGGA	2 cut(s)	943, 1520
AciI	CCGC	9 cut(s)	35, 1106, 1612, 1930, 2331, 2654, 2782, 2812, 2981
AclWI	GGATC	6 cut(s)	12, 647, 2292, 2649, 2888, 2901
AcoI	YGGCCR	1 cut(s)	1758
AcsI	RAATTY	6 cut(s)	193, 1223, 1403, 1640, 2445, 2711
AcuI	CTGAAG	3 cut(s)	356, 750, 2246
AdeI	CACNNNGTG	1 cut(s)	1331
AfaI	GTAC	6 cut(s)	165, 1007, 1460, 1858, 2776, 2904
AfeI	AGCGCT	1 cut(s)	429
AfiI	CCNNNNNNNGG	6 cut(s)	224, 388, 719, 759, 777, 1756
AflII	CTTAAG	1 cut(s)	1295
AflIII	ACRYGT	2 cut(s)	1390, 2599
AjnI	CCWGG	6 cut(s)	381, 752, 1157, 2120, 2277, 2581
AjuI	GAANNNNNNNTTGG	2 cut(s)	1457, 1489
AleI	CACNNNNGTG	1 cut(s)	1063
Alw21I	GWGCWC	2 cut(s)	1309, 2497
Alw26I	GTCTC	7 cut(s)	295, 506, 634, 1688, 1847, 1886, 1990
Alw44I	GTGCAC	1 cut(s)	2493
AlwI	GGATC	6 cut(s)	12, 647, 2292, 2649, 2888, 2901
AlwNI	CAGNNNCTG	1 cut(s)	1918
Ama87I	CYCGRG	2 cut(s)	2228, 2618
Aor13HI	TCCGGA	2 cut(s)	943, 1520
Aor51HI	AGCGCT	1 cut(s)	429
AoxI	GGCC	6 cut(s)	371, 721, 768, 1758, 2039, 2275
ApaLI	GTGCAC	1 cut(s)	2493
ApoI	RAATTY	6 cut(s)	193, 1223, 1403, 1640, 2445, 2711
Asp700I	GAANNNNTTC	1 cut(s)	1971
AspLEI	GCGC	3 cut(s)	35, 66, 430
AspS9I	GGNCC	3 cut(s)	372, 2098, 2275
AsuHPI	GGTGA	6 cut(s)	239, 403, 488, 1808, 1998, 2702
AvaI	CYCGRG	2 cut(s)	2228, 2618
AvaII	GGWCC	1 cut(s)	2098
BaeGI	GKGCMC	3 cut(s)	303, 490, 2497
BalI	TGGCCA	1 cut(s)	1760
BamHI	GGATCC	1 cut(s)	2893
BanI	GGYRCC	1 cut(s)	487
BanII	GRGCYC	1 cut(s)	2614
BauI	CACGAG	1 cut(s)	2060
BbsI	GAAGAC	4 cut(s)	344, 738, 1107, 1680
Bbv12I	GWGCWC	2 cut(s)	1309, 2497
BceAI	ACGGC	1 cut(s)	2755
BcgI	CGANNNNNNTGC	2 cut(s)	1661, 1695
BciT130I	CCWGG	6 cut(s)	383, 754, 1159, 2122, 2279, 2583
BciVI	GTATCC	2 cut(s)	191, 438
BclI	TGATCA	1 cut(s)	1081
BcoDI	GTCTC	7 cut(s)	295, 506, 634, 1688, 1847, 1886, 1990
BfaI	CTAG	5 cut(s)	12, 177, 629, 1535, 2975
BfmI	CTRYAG	2 cut(s)	1016, 1830
BfoI	RGCGCY	1 cut(s)	431
BfrI	CTTAAG	1 cut(s)	1295
BfuI	GTATCC	2 cut(s)	191, 438
BglII	AGATCT	1 cut(s)	820
BlpI	GCTNAGC	2 cut(s)	75, 204
Bme1390I	CCNGG	6 cut(s)	383, 754, 1159, 2122, 2279, 2583
Bme18I	GGWCC	1 cut(s)	2098
BmeT110I	CYCGRG	2 cut(s)	2228, 2618
BmgT120I	GGNCC	3 cut(s)	372, 2098, 2275
BmiI	GGNNCC	8 cut(s)	216, 272, 489, 2100, 2154, 2462, 2895, 2954
BmrFI	CCNGG	6 cut(s)	383, 754, 1159, 2122, 2279, 2583
BmrI	ACTGGG	4 cut(s)	220, 397, 1610, 2139
BmsI	GCATC	4 cut(s)	1277, 1804, 2544, 2905
BmuI	ACTGGG	4 cut(s)	220, 397, 1610, 2139
BpiI	GAAGAC	4 cut(s)	344, 738, 1107, 1680
BplI	GAGNNNNNCTC	2 cut(s)	1970, 2002
BpmI	CTGGAG	5 cut(s)	815, 1391, 1792, 1997, 2604
Bpu10I	CCTNAGC	3 cut(s)	363, 738, 1434
Bpu1102I	GCTNAGC	2 cut(s)	75, 204
BpuEI	CTTGAG	3 cut(s)	279, 460, 3077
Bsa29I	ATCGAT	1 cut(s)	1470
BsaBI	GATNNNNATC	1 cut(s)	1080
BsaI	GGTCTC	1 cut(s)	634
BsaJI	CCNNGG	5 cut(s)	753, 1157, 2121, 2948, 2989
BsaWI	WCCGGW	2 cut(s)	943, 1520
BsaXI	ACNNNNNCTCC	2 cut(s)	1364, 1394
Bsc4I	CCNNNNNNNGG	6 cut(s)	224, 388, 719, 759, 777, 1756
Bse1I	ACTGG	5 cut(s)	215, 392, 1616, 1761, 2134
Bse3DI	GCAATG	4 cut(s)	198, 374, 1502, 2934
Bse8I	GATNNNNATC	1 cut(s)	1080
BseAI	TCCGGA	2 cut(s)	943, 1520
BseBI	CCWGG	6 cut(s)	383, 754, 1159, 2122, 2279, 2583
BseCI	ATCGAT	1 cut(s)	1470
BseDI	CCNNGG	5 cut(s)	753, 1157, 2121, 2948, 2989
BseGI	GGATG	7 cut(s)	681, 764, 1102, 1306, 1844, 2713, 2920
BseJI	GATNNNNATC	1 cut(s)	1080
BseLI	CCNNNNNNNGG	6 cut(s)	224, 388, 719, 759, 777, 1756
BseMI	GCAATG	4 cut(s)	198, 374, 1502, 2934
BseMII	CTCAG	9 cut(s)	66, 354, 729, 1176, 1356, 1491, 2297, 2328, 3017
BseNI	ACTGG	5 cut(s)	215, 392, 1616, 1761, 2134
BseRI	GAGGAG	2 cut(s)	524, 1733
BseSI	GKGCMC	3 cut(s)	303, 490, 2497
BseYI	CCCAGC	1 cut(s)	1414
Bsh1236I	CGCG	2 cut(s)	35, 2331
BshFI	GGCC	6 cut(s)	373, 723, 770, 1760, 2041, 2277
BshNI	GGYRCC	1 cut(s)	487
BshVI	ATCGAT	1 cut(s)	1470
BsiHKAI	GWGCWC	2 cut(s)	1309, 2497
BsiHKCI	CYCGRG	2 cut(s)	2228, 2618
BsiSI	CCGG	2 cut(s)	944, 1521
BslFI	GGGAC	5 cut(s)	33, 1140, 1336, 2084, 2140
BslI	CCNNNNNNNGG	6 cut(s)	224, 388, 719, 759, 777, 1756
BsmAI	GTCTC	7 cut(s)	295, 506, 634, 1688, 1847, 1886, 1990
BsmBI	CGTCTC	1 cut(s)	1990
BsmFI	GGGAC	5 cut(s)	33, 1140, 1336, 2084, 2140
BsmI	GAATGC	1 cut(s)	922
BsnI	GGCC	6 cut(s)	373, 723, 770, 1760, 2041, 2277
Bso31I	GGTCTC	1 cut(s)	634
BsoBI	CYCGRG	2 cut(s)	2228, 2618
Bsp1286I	GDGCHC	5 cut(s)	303, 490, 1309, 2497, 2614
Bsp13I	TCCGGA	2 cut(s)	943, 1520
Bsp1407I	TGTACA	1 cut(s)	1005
Bsp1720I	GCTNAGC	2 cut(s)	75, 204
Bsp19I	CCATGG	1 cut(s)	2989
BspACI	CCGC	9 cut(s)	35, 1106, 1612, 1930, 2331, 2654, 2782, 2812, 2981
BspANI	GGCC	6 cut(s)	373, 723, 770, 1760, 2041, 2277
BspCNI	CTCAG	9 cut(s)	67, 355, 730, 1177, 1357, 1490, 2298, 2329, 3018
BspDI	ATCGAT	1 cut(s)	1470
BspEI	TCCGGA	2 cut(s)	943, 1520
BspFNI	CGCG	2 cut(s)	35, 2331
BspLI	GGNNCC	8 cut(s)	216, 272, 489, 2100, 2154, 2462, 2895, 2954
BspMAI	CTGCAG	2 cut(s)	1020, 1834
BspPI	GGATC	6 cut(s)	12, 647, 2292, 2649, 2888, 2901
BspQI	GCTCTTC	2 cut(s)	2619, 3025
BspT107I	GGYRCC	1 cut(s)	487
BspTI	CTTAAG	1 cut(s)	1295
BspTNI	GGTCTC	1 cut(s)	634
BsrBI	CCGCTC	1 cut(s)	2814
BsrDI	GCAATG	4 cut(s)	198, 374, 1502, 2934
BsrGI	TGTACA	1 cut(s)	1005
BsrI	ACTGG	5 cut(s)	215, 392, 1616, 1761, 2134
BssECI	CCNNGG	5 cut(s)	753, 1157, 2121, 2948, 2989
BssSI	CACGAG	1 cut(s)	2060
BssT1I	CCWWGG	2 cut(s)	2948, 2989
Bst2BI	CACGAG	1 cut(s)	2060
Bst2UI	CCWGG	6 cut(s)	383, 754, 1159, 2122, 2279, 2583
Bst4CI	ACNGT	7 cut(s)	986, 1154, 1233, 1796, 1914, 2222, 3079
Bst6I	CTCTTC	7 cut(s)	989, 1962, 2480, 2619, 2661, 2912, 3025
BstAFI	CTTAAG	1 cut(s)	1295
BstAPI	GCANNNNNTGC	3 cut(s)	403, 1829, 3080
BstAUI	TGTACA	1 cut(s)	1005
BstC8I	GCNNGC	5 cut(s)	725, 1314, 1591, 2235, 3001
BstDSI	CCRYGG	1 cut(s)	2989
BstEII	GGTNACC	1 cut(s)	227
BstF5I	GGATG	7 cut(s)	681, 764, 1102, 1306, 1844, 2713, 2920
BstFNI	CGCG	2 cut(s)	35, 2331
BstH2I	RGCGCY	1 cut(s)	431
BstHHI	GCGC	3 cut(s)	35, 66, 430
BstMAI	GTCTC	7 cut(s)	295, 506, 634, 1688, 1847, 1886, 1990
BstNI	CCWGG	6 cut(s)	383, 754, 1159, 2122, 2279, 2583
BstNSI	RCATGY	4 cut(s)	1006, 1394, 2271, 2603
BstPI	GGTNACC	1 cut(s)	227
BstSCI	CCNGG	6 cut(s)	381, 752, 1157, 2120, 2277, 2581
BstSFI	CTRYAG	2 cut(s)	1016, 1830
BstSLI	GKGCMC	3 cut(s)	303, 490, 2497
BstUI	CGCG	2 cut(s)	35, 2331
BstV2I	GAAGAC	4 cut(s)	344, 738, 1107, 1680
BstX2I	RGATCY	3 cut(s)	4, 820, 2893
BstYI	RGATCY	3 cut(s)	4, 820, 2893
Bsu15I	ATCGAT	1 cut(s)	1470
BsuI	GTATCC	2 cut(s)	191, 438
BsuRI	GGCC	6 cut(s)	373, 723, 770, 1760, 2041, 2277
BsuTUI	ATCGAT	1 cut(s)	1470
BtgI	CCRYGG	1 cut(s)	2989
BtgZI	GCGATG	3 cut(s)	2757, 2838, 2871
BtsCI	GGATG	7 cut(s)	681, 764, 1102, 1306, 1844, 2713, 2920
BtsI	GCAGTG	1 cut(s)	1839
BtsIMutI	CAGTG	5 cut(s)	208, 1768, 1785, 1839, 2227
Cac8I	GCNNGC	5 cut(s)	725, 1314, 1591, 2235, 3001
CaiI	CAGNNNCTG	1 cut(s)	1918
CfoI	GCGC	3 cut(s)	35, 66, 430
Cfr13I	GGNCC	3 cut(s)	372, 2098, 2275
ClaI	ATCGAT	1 cut(s)	1470
CseI	GACGC	1 cut(s)	1155
Csp6I	GTAC	6 cut(s)	164, 1006, 1459, 1857, 2775, 2903
CspCI	CAANNNNNGTGG	2 cut(s)	96, 131
CviQI	GTAC	6 cut(s)	164, 1006, 1459, 1857, 2775, 2903
DraIII	CACNNNGTG	1 cut(s)	1331
EaeI	YGGCCR	1 cut(s)	1758
Eam1104I	CTCTTC	7 cut(s)	989, 1962, 2480, 2619, 2661, 2912, 3025
EarI	CTCTTC	7 cut(s)	989, 1962, 2480, 2619, 2661, 2912, 3025
EciI	GGCGGA	1 cut(s)	1601
Eco130I	CCWWGG	2 cut(s)	2948, 2989
Eco24I	GRGCYC	1 cut(s)	2614
Eco31I	GGTCTC	1 cut(s)	634
Eco32I	GATATC	2 cut(s)	938, 2187
Eco47I	GGWCC	1 cut(s)	2098
Eco47III	AGCGCT	1 cut(s)	429
Eco57I	CTGAAG	3 cut(s)	356, 750, 2246
Eco88I	CYCGRG	2 cut(s)	2228, 2618
Eco91I	GGTNACC	1 cut(s)	227
EcoO65I	GGTNACC	1 cut(s)	227
EcoRI	GAATTC	1 cut(s)	2711
EcoRII	CCWGG	6 cut(s)	381, 752, 1157, 2120, 2277, 2581
EcoRV	GATATC	2 cut(s)	938, 2187
EcoT14I	CCWWGG	2 cut(s)	2948, 2989
EcoT38I	GRGCYC	1 cut(s)	2614
ErhI	CCWWGG	2 cut(s)	2948, 2989
Esp3I	CGTCTC	1 cut(s)	1990
FalI	AAGNNNNNCTT	2 cut(s)	386, 418
FaqI	GGGAC	5 cut(s)	33, 1140, 1336, 2084, 2140
FauI	CCCGC	2 cut(s)	1113, 2988
FbaI	TGATCA	1 cut(s)	1081
FokI	GGATG	7 cut(s)	688, 771, 1109, 1313, 1851, 2720, 2927
FriOI	GRGCYC	1 cut(s)	2614
FspBI	CTAG	5 cut(s)	12, 177, 629, 1535, 2975
GlaI	GCGC	3 cut(s)	34, 65, 429
GsaI	CCCAGC	1 cut(s)	1418
GsuI	CTGGAG	5 cut(s)	815, 1391, 1792, 1997, 2604
HaeII	RGCGCY	1 cut(s)	431
HaeIII	GGCC	6 cut(s)	373, 723, 770, 1760, 2041, 2277
HapII	CCGG	2 cut(s)	944, 1521
HgaI	GACGC	1 cut(s)	1155
HhaI	GCGC	3 cut(s)	35, 66, 430
Hin6I	GCGC	3 cut(s)	33, 64, 428
HinP1I	GCGC	3 cut(s)	33, 64, 428
HincII	GTYRAC	1 cut(s)	2547
HindII	GTYRAC	1 cut(s)	2547
HindIII	AAGCTT	1 cut(s)	593
HpaII	CCGG	2 cut(s)	944, 1521
HphI	GGTGA	6 cut(s)	239, 403, 488, 1808, 1998, 2702
Hpy166II	GTNNAC	4 cut(s)	1243, 2495, 2547, 2777
Hpy8I	GTNNAC	4 cut(s)	1243, 2495, 2547, 2777
HpyAV	CCTTC	8 cut(s)	576, 713, 760, 1117, 1651, 2359, 2369, 2573
HpyCH4III	ACNGT	7 cut(s)	986, 1154, 1233, 1796, 1914, 2222, 3079
HpyCH4IV	ACGT	2 cut(s)	703, 2497
HpySE526I	ACGT	2 cut(s)	703, 2497
HspAI	GCGC	3 cut(s)	33, 64, 428
Kpn2I	TCCGGA	2 cut(s)	943, 1520
Ksp22I	TGATCA	1 cut(s)	1081
LguI	GCTCTTC	2 cut(s)	2619, 3025
LmnI	GCTCC	3 cut(s)	425, 2242, 3022
LweI	GCATC	4 cut(s)	1277, 1804, 2544, 2905
MaeI	CTAG	5 cut(s)	12, 177, 629, 1535, 2975
MaeII	ACGT	2 cut(s)	703, 2497
MaeIII	GTNAC	5 cut(s)	227, 1180, 1914, 2222, 2920
MbiI	CCGCTC	1 cut(s)	2814
MfeI	CAATTG	2 cut(s)	2576, 2880
MflI	RGATCY	3 cut(s)	4, 820, 2893
MhlI	GDGCHC	5 cut(s)	303, 490, 1309, 2497, 2614
MlsI	TGGCCA	1 cut(s)	1760
MluNI	TGGCCA	1 cut(s)	1760
MlyI	GAGTC	4 cut(s)	960, 2041, 2936, 2988
Mox20I	TGGCCA	1 cut(s)	1760
MroI	TCCGGA	2 cut(s)	943, 1520
MroXI	GAANNNNTTC	1 cut(s)	1971
MscI	TGGCCA	1 cut(s)	1760
MslI	CAYNNNNRTG	6 cut(s)	225, 1063, 1113, 1893, 2927, 2988
Msp20I	TGGCCA	1 cut(s)	1760
MspA1I	CMGCKG	2 cut(s)	1418, 2570
MspCI	CTTAAG	1 cut(s)	1295
MspI	CCGG	2 cut(s)	944, 1521
MspR9I	CCNGG	6 cut(s)	383, 754, 1159, 2122, 2279, 2583
MunI	CAATTG	2 cut(s)	2576, 2880
Mva1269I	GAATGC	1 cut(s)	922
MvaI	CCWGG	6 cut(s)	383, 754, 1159, 2122, 2279, 2583
MvnI	CGCG	2 cut(s)	35, 2331
NcoI	CCATGG	1 cut(s)	2989
NlaIV	GGNNCC	8 cut(s)	216, 272, 489, 2100, 2154, 2462, 2895, 2954
NmuCI	GTSAC	4 cut(s)	227, 1180, 2222, 2920
NspI	RCATGY	4 cut(s)	1006, 1394, 2271, 2603
OliI	CACNNNNGTG	1 cut(s)	1063
PaeR7I	CTCGAG	2 cut(s)	2228, 2618
PciI	ACATGT	2 cut(s)	1390, 2599
PciSI	GCTCTTC	2 cut(s)	2619, 3025
PcsI	WCGNNNNNNNCGW	3 cut(s)	24, 1467, 2745
PctI	GAATGC	1 cut(s)	922
PdmI	GAANNNNTTC	1 cut(s)	1971
PfeI	GAWTC	8 cut(s)	277, 835, 1556, 1868, 2310, 2752, 2873, 3040
PflFI	GACNNNGTC	1 cut(s)	1165
PflMI	CCANNNNNTGG	2 cut(s)	777, 1756
PfoI	TCCNGGA	1 cut(s)	381
PleI	GAGTC	4 cut(s)	959, 2040, 2936, 2988
PpsI	GAGTC	4 cut(s)	959, 2040, 2936, 2988
PscI	ACATGT	2 cut(s)	1390, 2599
Psp6I	CCWGG	6 cut(s)	381, 752, 1157, 2120, 2277, 2581
PspEI	GGTNACC	1 cut(s)	227
PspFI	CCCAGC	1 cut(s)	1414
PspGI	CCWGG	6 cut(s)	381, 752, 1157, 2120, 2277, 2581
PspN4I	GGNNCC	8 cut(s)	216, 272, 489, 2100, 2154, 2462, 2895, 2954
PspPI	GGNCC	3 cut(s)	372, 2098, 2275
PspXI	VCTCGAGB	1 cut(s)	2228
PsrI	GAACNNNNNNTAC	2 cut(s)	1899, 1931
PstI	CTGCAG	2 cut(s)	1020, 1834
PstNI	CAGNNNCTG	1 cut(s)	1918
PsuI	RGATCY	3 cut(s)	4, 820, 2893
PsyI	GACNNNGTC	1 cut(s)	1165
PvuII	CAGCTG	2 cut(s)	1418, 2570
RsaI	GTAC	6 cut(s)	165, 1007, 1460, 1858, 2776, 2904
RsaNI	GTAC	6 cut(s)	164, 1006, 1459, 1857, 2775, 2903
RseI	CAYNNNNRTG	6 cut(s)	225, 1063, 1113, 1893, 2927, 2988
SapI	GCTCTTC	2 cut(s)	2619, 3025
Sau96I	GGNCC	3 cut(s)	372, 2098, 2275
SchI	GAGTC	4 cut(s)	960, 2041, 2936, 2988
ScrFI	CCNGG	6 cut(s)	383, 754, 1159, 2122, 2279, 2583
SduI	GDGCHC	5 cut(s)	303, 490, 1309, 2497, 2614
SfaNI	GCATC	4 cut(s)	1277, 1804, 2544, 2905
SfcI	CTRYAG	2 cut(s)	1016, 1830
Sfr274I	CTCGAG	2 cut(s)	2228, 2618
SinI	GGWCC	1 cut(s)	2098
SlaI	CTCGAG	2 cut(s)	2228, 2618
SmiMI	CAYNNNNRTG	6 cut(s)	225, 1063, 1113, 1893, 2927, 2988
SmlI	CTYRAG	6 cut(s)	294, 439, 1295, 2228, 2618, 3056
SmoI	CTYRAG	6 cut(s)	294, 439, 1295, 2228, 2618, 3056
SsiI	CCGC	9 cut(s)	35, 1106, 1612, 1930, 2331, 2654, 2782, 2812, 2981
SspI	AATATT	1 cut(s)	2212
SspMI	CTAG	5 cut(s)	12, 177, 629, 1535, 2975
StyD4I	CCNGG	6 cut(s)	381, 752, 1157, 2120, 2277, 2581
StyI	CCWWGG	2 cut(s)	2948, 2989
TaaI	ACNGT	7 cut(s)	986, 1154, 1233, 1796, 1914, 2222, 3079
TaiI	ACGT	2 cut(s)	706, 2500
TaqI	TCGA	7 cut(s)	507, 573, 992, 1470, 1782, 2229, 2619
TatI	WGTACW	2 cut(s)	1005, 2774
TauI	GCSGC	2 cut(s)	38, 2657
TfiI	GAWTC	8 cut(s)	277, 835, 1556, 1868, 2310, 2752, 2873, 3040
TscAI	CASTG	5 cut(s)	215, 1768, 1792, 1839, 2227
TseFI	GTSAC	4 cut(s)	227, 1180, 2222, 2920
Tsp45I	GTSAC	4 cut(s)	227, 1180, 2222, 2920
TspGWI	ACGGA	3 cut(s)	1719, 1835, 3035
TspRI	CASTG	5 cut(s)	215, 1768, 1792, 1839, 2227
Tth111I	GACNNNGTC	1 cut(s)	1165
Van91I	CCANNNNNTGG	2 cut(s)	777, 1756
Vha464I	CTTAAG	1 cut(s)	1295
VneI	GTGCAC	1 cut(s)	2493
VpaK11BI	GGWCC	1 cut(s)	2098
XapI	RAATTY	6 cut(s)	193, 1223, 1403, 1640, 2445, 2711
XbaI	TCTAGA	2 cut(s)	628, 1534
XceI	RCATGY	4 cut(s)	1006, 1394, 2271, 2603
XhoI	CTCGAG	2 cut(s)	2228, 2618
XmnI	GAANNNNTTC	1 cut(s)	1971
XspI	CTAG	5 cut(s)	12, 177, 629, 1535, 2975

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.