AT3G61160
ERF Family

belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
Physical Location & Seq
Forward (+)
22635803 .. 22638817
3015 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G61160.5

Sequence Viewer

Length: 1296 bp
ATGAATGTGGTGCGGAGATTAACGAGTATTGCCTCTGGACGTAATTTCGTTTCTTCTGATAACGTAGGAGAAACTGAGACGCCGAGATCAAAGCCTAACCAGAATCGTGAAGAAACAGAGTCTACGGAAACTACGTCGTACGAGAAAGATTCTGTCTCTTCCTCAGAGAACTCTGATCATTTACCAAAGGAAATCCGTGAGGATATGGACTGTGGAATCATCAAGGGAAATGGAACAGAATCTGGACGGATTATTACCACCAAAAAGAAGGGTTTGAATGATCAAAAAGACAAGACAATCTCTTACAGAGCTGAACATGTAATTGGCACTGGCTCATTCGGTGTTGTCTTTCAGGCTAAGTGCTTAGAGACGGAAGAAAAAGTAGCAATAAAGAAAGTGTTACAGGACAAGAGATACAAAAACAGAGAACTTCAGATCATGCGAATGCTTGATCATCCTAATGTCGTTGAGCTCAAGCATTCTTTCTTTTCCACGACTGAGAAAGACGAGCTTTATCTTAACCTTGTTCTTGAGTATGTACCCGAGACTATTTACCGCGCTTCCAGATCTTACACCAAGATGAATCAGCATATGCCTTTGATTTATATTCAGCTCTACACCTATCAGATTTGCCGTGCTATGAATTATCTGCATCAAGTGGTTGGAGTGTGTCACCGTGACATTAAGCCGCAGAATCTGTTGGTCAATAATGTTACGCATGAAGTAAAGATATGCGATTTTGGGAGCGCCAAAATGCTGATTCCAGGAGAACCAAATATATCTTACATATGCTCAAGGTATTACAGAGCTCCTGAACTCATATTTGGAGCAACCGAATACACAAGTGCGATCGATATGTGGTCTGTAGGTTGTGTCATGGCTGAGCTTTTTCTTGGACATCCTCTATTCCCTGGAGAAACCAGTGTTGATCAATTGGTGGAGATCATTAAGATTTTAGGGACACCAGCAAGAGAAGAGATAAAGAACATGAATCCTCGTTACAATGATTTTAAGTTCCCTCAGATCAAAGCTCAGCCGTGGCACAAGATTTTCCGGAGACAGGTATCTCCAGAAGCAATGGATCTTGCCTCTAGATTGCTCCAGTATTCACCAAACCTGAGATGCACAGCGCTTGAAGCATGTGCACACCCATTCTTCGATGATCTGAGAGACCCGAGAGCATCCTTGCCTAATGGAAGAGCACTTCCTCCATTGTTTGATTTCACAGCTCAAGAACTTGCTGGGGCATCTGTTGAACTGCGTCATCGCTTAATACCTGAGCATGCAAGGAAATGA

Protein Analysis

431

Amino Acids

49.31

Weight (kDa)

7.61

Isoelectric Point (pI)

38.39

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 102 - 378 8.7e-60 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 105 - 302 7.4e-28 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 122
AccII CGCG 1 cut(s) 558
AccIII TCCGGA 1 cut(s) 1053
AciI CCGC 3 cut(s) 13, 556, 689
AclWI GGATC 1 cut(s) 1089
AcuI CTGAAG 1 cut(s) 416
AcyI GRCGYC 1 cut(s) 80
AfaI GTAC 2 cut(s) 140, 540
AfeI AGCGCT 1 cut(s) 1131
AfiI CCNNNNNNNGG 1 cut(s) 1060
AflIII ACRYGT 1 cut(s) 316
AgsI TTSAA 3 cut(s) 277, 1136, 1256
AjnI CCWGG 2 cut(s) 763, 910
AjuI GAANNNNNNNTTGG 4 cut(s) 306, 338, 807, 839
AluBI AGCT 8 cut(s) 311, 472, 511, 613, 809, 886, 1031, 1229
AluI AGCT 8 cut(s) 311, 472, 511, 613, 809, 886, 1031, 1229
Alw21I GWGCWC 4 cut(s) 474, 811, 1147, 1204
Alw26I GTCTC 6 cut(s) 71, 160, 362, 539, 1051, 1164
Alw44I GTGCAC 1 cut(s) 1143
AlwI GGATC 1 cut(s) 1089
AlwNI CAGNNNCTG 2 cut(s) 242, 697
Ama87I CYCGRG 2 cut(s) 542, 1174
Aor13HI TCCGGA 1 cut(s) 1053
Aor51HI AGCGCT 1 cut(s) 1131
ApaLI GTGCAC 1 cut(s) 1143
AspLEI GCGC 3 cut(s) 560, 749, 1132
AsuHPI GGTGA 2 cut(s) 665, 1101
AvaI CYCGRG 2 cut(s) 542, 1174
BaeGI GKGCMC 1 cut(s) 1147
BanII GRGCYC 2 cut(s) 474, 811
Bbv12I GWGCWC 4 cut(s) 474, 811, 1147, 1204
BceAI ACGGC 2 cut(s) 618, 1021
BciT130I CCWGG 2 cut(s) 765, 912
BclI TGATCA 4 cut(s) 175, 280, 451, 928
BcoDI GTCTC 6 cut(s) 71, 160, 362, 539, 1051, 1164
BfaI CTAG 1 cut(s) 1092
BfmI CTRYAG 1 cut(s) 864
BfoI RGCGCY 2 cut(s) 750, 1133
BglII AGATCT 1 cut(s) 566
BisI GCNGC 1 cut(s) 689
BlpI GCTNAGC 2 cut(s) 882, 1032
BlsI GCNGC 1 cut(s) 690
Bme1390I CCNGG 2 cut(s) 765, 912
BmeT110I CYCGRG 2 cut(s) 542, 1174
BmrFI CCNGG 2 cut(s) 765, 912
BmsI GCATC 4 cut(s) 661, 1112, 1190, 1256
BpmI CTGGAG 3 cut(s) 933, 1053, 1085
Bpu10I CCTNAGC 1 cut(s) 1278
Bpu1102I GCTNAGC 2 cut(s) 882, 1032
BpuEI CTTGAG 4 cut(s) 458, 551, 778, 1215
Bsa29I ATCGAT 1 cut(s) 852
BsaHI GRCGYC 1 cut(s) 80
BsaI GGTCTC 1 cut(s) 1164
BsaJI CCNNGG 2 cut(s) 910, 1037
BsaWI WCCGGW 1 cut(s) 1053
Bsc4I CCNNNNNNNGG 1 cut(s) 1060
Bse1I ACTGG 3 cut(s) 334, 921, 1102
Bse3DI GCAATG 1 cut(s) 1083
BseAI TCCGGA 1 cut(s) 1053
BseBI CCWGG 2 cut(s) 765, 912
BseCI ATCGAT 1 cut(s) 852
BseDI CCNNGG 2 cut(s) 910, 1037
BseGI GGATG 3 cut(s) 454, 898, 1181
BseLI CCNNNNNNNGG 1 cut(s) 1060
BseMI GCAATG 1 cut(s) 1083
BseMII CTCAG 9 cut(s) 66, 177, 489, 873, 1034, 1046, 1109, 1157, 1269
BseNI ACTGG 3 cut(s) 334, 921, 1102
BseSI GKGCMC 1 cut(s) 1147
BseYI CCCAGC 1 cut(s) 1241
Bsh1236I CGCG 1 cut(s) 558
Bsh1285I CGRYCG 1 cut(s) 852
BshVI ATCGAT 1 cut(s) 852
BsiEI CGRYCG 1 cut(s) 852
BsiHKAI GWGCWC 4 cut(s) 474, 811, 1147, 1204
BsiHKCI CYCGRG 2 cut(s) 542, 1174
BsiSI CCGG 1 cut(s) 1054
BsiWI CGTACG 1 cut(s) 138
BslFI GGGAC 1 cut(s) 973
BslI CCNNNNNNNGG 1 cut(s) 1060
BsmAI GTCTC 6 cut(s) 71, 160, 362, 539, 1051, 1164
BsmBI CGTCTC 2 cut(s) 71, 362
BsmFI GGGAC 1 cut(s) 973
BsmI GAATGC 2 cut(s) 450, 478
Bso31I GGTCTC 1 cut(s) 1164
BsoBI CYCGRG 2 cut(s) 542, 1174
Bsp1286I GDGCHC 4 cut(s) 474, 811, 1147, 1204
Bsp13I TCCGGA 1 cut(s) 1053
Bsp1720I GCTNAGC 2 cut(s) 882, 1032
BspACI CCGC 3 cut(s) 13, 556, 689
BspCNI CTCAG 9 cut(s) 67, 176, 490, 874, 1033, 1045, 1110, 1158, 1270
BspDI ATCGAT 1 cut(s) 852
BspEI TCCGGA 1 cut(s) 1053
BspFNI CGCG 1 cut(s) 558
BspPI GGATC 1 cut(s) 1089
BspQI GCTCTTC 1 cut(s) 1192
BspTNI GGTCTC 1 cut(s) 1164
BsrDI GCAATG 1 cut(s) 1083
BsrI ACTGG 3 cut(s) 334, 921, 1102
BssECI CCNNGG 2 cut(s) 910, 1037
BssNI GRCGYC 1 cut(s) 80
Bst2UI CCWGG 2 cut(s) 765, 912
Bst4CI ACNGT 2 cut(s) 212, 677
Bst6I CTCTTC 3 cut(s) 163, 969, 1192
BstACI GRCGYC 1 cut(s) 80
BstC8I GCNNGC 1 cut(s) 1284
BstDSI CCRYGG 1 cut(s) 1037
BstF5I GGATG 3 cut(s) 454, 898, 1181
BstFNI CGCG 1 cut(s) 558
BstH2I RGCGCY 2 cut(s) 750, 1133
BstHHI GCGC 3 cut(s) 560, 749, 1132
BstMAI GTCTC 6 cut(s) 71, 160, 362, 539, 1051, 1164
BstMCI CGRYCG 1 cut(s) 852
BstMWI GCNNNNNNNGC 1 cut(s) 1136
BstNI CCWGG 2 cut(s) 765, 912
BstNSI RCATGY 3 cut(s) 320, 1143, 1286
BstSCI CCNGG 2 cut(s) 763, 910
BstSFI CTRYAG 1 cut(s) 864
BstSLI GKGCMC 1 cut(s) 1147
BstUI CGCG 1 cut(s) 558
BstX2I RGATCY 2 cut(s) 566, 1081
BstYI RGATCY 2 cut(s) 566, 1081
Bsu15I ATCGAT 1 cut(s) 852
BsuTUI ATCGAT 1 cut(s) 852
BtgI CCRYGG 1 cut(s) 1037
BtgZI GCGATG 1 cut(s) 1250
BtsCI GGATG 3 cut(s) 454, 898, 1181
BtsIMutI CAGTG 2 cut(s) 327, 928
Cac8I GCNNGC 1 cut(s) 1284
CaiI CAGNNNCTG 2 cut(s) 242, 697
CfoI GCGC 3 cut(s) 560, 749, 1132
ClaI ATCGAT 1 cut(s) 852
CseI GACGC 2 cut(s) 88, 1250
Csp6I GTAC 2 cut(s) 139, 539
CviAII CATG 7 cut(s) 317, 439, 719, 877, 988, 1140, 1283
CviQI GTAC 2 cut(s) 139, 539
Eam1104I CTCTTC 3 cut(s) 163, 969, 1192
EarI CTCTTC 3 cut(s) 163, 969, 1192
Ecl136II GAGCTC 2 cut(s) 472, 809
Eco24I GRGCYC 2 cut(s) 474, 811
Eco31I GGTCTC 1 cut(s) 1164
Eco47III AGCGCT 1 cut(s) 1131
Eco53kI GAGCTC 2 cut(s) 472, 809
Eco57I CTGAAG 1 cut(s) 416
Eco88I CYCGRG 2 cut(s) 542, 1174
EcoICRI GAGCTC 2 cut(s) 472, 809
EcoRII CCWGG 2 cut(s) 763, 910
EcoT38I GRGCYC 2 cut(s) 474, 811
Esp3I CGTCTC 2 cut(s) 71, 362
FaeI CATG 7 cut(s) 320, 442, 722, 880, 991, 1143, 1286
FalI AAGNNNNNCTT 2 cut(s) 495, 527
FaqI GGGAC 1 cut(s) 973
FatI CATG 7 cut(s) 316, 438, 718, 876, 987, 1139, 1282
FauNDI CATATG 2 cut(s) 591, 788
FbaI TGATCA 4 cut(s) 175, 280, 451, 928
FblI GTMKAC 1 cut(s) 122
Fnu4HI GCNGC 1 cut(s) 689
FokI GGATG 3 cut(s) 441, 885, 1168
FriOI GRGCYC 2 cut(s) 474, 811
Fsp4HI GCNGC 1 cut(s) 689
FspBI CTAG 1 cut(s) 1092
GlaI GCGC 3 cut(s) 559, 748, 1131
GluI GCNGC 1 cut(s) 689
GsaI CCCAGC 1 cut(s) 1245
GsuI CTGGAG 3 cut(s) 933, 1053, 1085
HaeII RGCGCY 2 cut(s) 750, 1133
HapII CCGG 1 cut(s) 1054
HgaI GACGC 2 cut(s) 88, 1250
HhaI GCGC 3 cut(s) 560, 749, 1132
Hin1I GRCGYC 1 cut(s) 80
Hin1II CATG 7 cut(s) 320, 442, 722, 880, 991, 1143, 1286
Hin6I GCGC 3 cut(s) 558, 747, 1130
HinP1I GCGC 3 cut(s) 558, 747, 1130
HinfI GANTC 9 cut(s) 103, 119, 149, 216, 239, 583, 694, 760, 991
HpaII CCGG 1 cut(s) 1054
HphI GGTGA 2 cut(s) 665, 1101
Hpy166II GTNNAC 2 cut(s) 123, 1145
Hpy188I TCNGA 7 cut(s) 58, 166, 175, 435, 627, 1023, 1167
Hpy8I GTNNAC 2 cut(s) 123, 1145
Hpy99I CGWCG 1 cut(s) 139
HpyAV CCTTC 1 cut(s) 262
HpyCH4III ACNGT 2 cut(s) 212, 677
HpyCH4IV ACGT 3 cut(s) 40, 63, 134
HpyCH4V TGCA 4 cut(s) 652, 1125, 1145, 1286
HpyF10VI GCNNNNNNNGC 1 cut(s) 1136
HpySE526I ACGT 3 cut(s) 40, 63, 134
Hsp92I GRCGYC 1 cut(s) 80
Hsp92II CATG 7 cut(s) 320, 442, 722, 880, 991, 1143, 1286
HspAI GCGC 3 cut(s) 558, 747, 1130
Kpn2I TCCGGA 1 cut(s) 1053
Ksp22I TGATCA 4 cut(s) 175, 280, 451, 928
LguI GCTCTTC 1 cut(s) 1192
LmnI GCTCC 4 cut(s) 744, 814, 827, 1104
LweI GCATC 4 cut(s) 661, 1112, 1190, 1256
MaeI CTAG 1 cut(s) 1092
MaeII ACGT 3 cut(s) 40, 63, 134
MaeIII GTNAC 5 cut(s) 399, 671, 677, 712, 998
MboII GAAGA 7 cut(s) 45, 122, 150, 386, 986, 1147, 1209
MfeI CAATTG 1 cut(s) 932
MflI RGATCY 2 cut(s) 566, 1081
MhlI GDGCHC 4 cut(s) 474, 811, 1147, 1204
MluCI AATT 4 cut(s) 43, 321, 643, 932
MlyI GAGTC 1 cut(s) 128
MmeI TCCRAC 1 cut(s) 643
MnlI CCTC 8 cut(s) 43, 172, 193, 912, 1005, 1029, 1099, 1218
MroI TCCGGA 1 cut(s) 1053
MseI TTAA 6 cut(s) 20, 519, 684, 948, 1011, 1271
MslI CAYNNNNRTG 3 cut(s) 443, 459, 578
MspI CCGG 1 cut(s) 1054
MspR9I CCNGG 2 cut(s) 765, 912
MunI CAATTG 1 cut(s) 932
Mva1269I GAATGC 2 cut(s) 450, 478
MvaI CCWGG 2 cut(s) 765, 912
MvnI CGCG 1 cut(s) 558
MwoI GCNNNNNNNGC 1 cut(s) 1136
NdeI CATATG 2 cut(s) 591, 788
NlaIII CATG 7 cut(s) 320, 442, 722, 880, 991, 1143, 1286
NmeAIII GCCGAG 1 cut(s) 108
NmuCI GTSAC 2 cut(s) 671, 677
NspI RCATGY 3 cut(s) 320, 1143, 1286
PaeI GCATGC 1 cut(s) 1286
PciI ACATGT 1 cut(s) 316
PciSI GCTCTTC 1 cut(s) 1192
PcsI WCGNNNNNNNCGW 1 cut(s) 131
PctI GAATGC 2 cut(s) 450, 478
PfeI GAWTC 8 cut(s) 103, 149, 216, 239, 583, 694, 760, 991
Pfl23II CGTACG 1 cut(s) 138
PfoI TCCNGGA 1 cut(s) 763
PkrI GCNGC 1 cut(s) 690
Ple19I CGATCG 1 cut(s) 852
PleI GAGTC 1 cut(s) 127
PpsI GAGTC 1 cut(s) 127
PscI ACATGT 1 cut(s) 316
Psp124BI GAGCTC 2 cut(s) 474, 811
Psp6I CCWGG 2 cut(s) 763, 910
PspFI CCCAGC 1 cut(s) 1241
PspGI CCWGG 2 cut(s) 763, 910
PspLI CGTACG 1 cut(s) 138
PstNI CAGNNNCTG 2 cut(s) 242, 697
PsuI RGATCY 2 cut(s) 566, 1081
PvuI CGATCG 1 cut(s) 852
RsaI GTAC 2 cut(s) 140, 540
RsaNI GTAC 2 cut(s) 139, 539
RseI CAYNNNNRTG 3 cut(s) 443, 459, 578
SacI GAGCTC 2 cut(s) 474, 811
SapI GCTCTTC 1 cut(s) 1192
SaqAI TTAA 6 cut(s) 20, 519, 684, 948, 1011, 1271
SatI GCNGC 1 cut(s) 689
SchI GAGTC 1 cut(s) 128
ScrFI CCNGG 2 cut(s) 765, 912
SduI GDGCHC 4 cut(s) 474, 811, 1147, 1204
SfaNI GCATC 4 cut(s) 661, 1112, 1190, 1256
SfcI CTRYAG 1 cut(s) 864
SmiMI CAYNNNNRTG 3 cut(s) 443, 459, 578
SmlI CTYRAG 4 cut(s) 473, 530, 793, 1230
SmoI CTYRAG 4 cut(s) 473, 530, 793, 1230
SphI GCATGC 1 cut(s) 1286
Sse9I AATT 4 cut(s) 43, 321, 643, 932
SsiI CCGC 3 cut(s) 13, 556, 689
SspMI CTAG 1 cut(s) 1092
SstI GAGCTC 2 cut(s) 474, 811
StyD4I CCNGG 2 cut(s) 763, 910
TaaI ACNGT 2 cut(s) 212, 677
TaiI ACGT 3 cut(s) 43, 66, 137
TaqI TCGA 2 cut(s) 852, 1158
TasI AATT 4 cut(s) 43, 321, 643, 932
TauI GCSGC 1 cut(s) 691
TfiI GAWTC 8 cut(s) 103, 149, 216, 239, 583, 694, 760, 991
Tru1I TTAA 6 cut(s) 20, 519, 684, 948, 1011, 1271
Tru9I TTAA 6 cut(s) 20, 519, 684, 948, 1011, 1271
TscAI CASTG 2 cut(s) 334, 928
TseFI GTSAC 2 cut(s) 671, 677
Tsp45I GTSAC 2 cut(s) 671, 677
TspDTI ATGAA 5 cut(s) 17, 596, 656, 735, 1004
TspGWI ACGGA 4 cut(s) 140, 185, 262, 386
TspRI CASTG 2 cut(s) 334, 928
VneI GTGCAC 1 cut(s) 1143
XbaI TCTAGA 1 cut(s) 1091
XceI RCATGY 3 cut(s) 320, 1143, 1286
XmiI GTMKAC 1 cut(s) 122
XspI CTAG 1 cut(s) 1092
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.