Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0007610

Physical Location & Seq

Genomic Coordinates Reverse (-)

382663 .. 386850

Gene Structure 4188 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT4G00900.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3165 bp

ATGGAGGAGGAGAAGTCGTTCTCGGCGTGGTCTTGGTCTGTTGAGCAATGTTTGAAAGAGTACAAGACAAGATTAGACAAGGGTTTAACTAGCGAAGATGTCCAAATCCGCCGTCAAAAGTACGGTTTTAACGAGCTTGCTAAGGAGAAAGGCAAGCCTTTATGGCATCTTGTATTGGAACAATTCGACGATACGCTTGTGAAGATTCTTCTCGGTGCTGCGTTTATCTCTTTCGTTTTAGCCTTTTTAGGTGAGGAACACGGCTCAGGTTCAGGGTTCGAGGCCTTTGTTGAGCCTTTTGTGATTGTTTTGATTCTGATTTTAAACGCTGTGGTTGGTGTGTGGCAAGAGAGTAATGCTGAGAAAGCACTTGAGGCTCTTAAAGAGATGCAATGTGAATCTGCAAAGGTTTTGAGAGATGGGAATGTGTTGCCTAATTTGCCTGCTAGAGAGCTTGTTCCAGGGGATATTGTGGAGTTAAATGTAGGAGATAAAGTCCCTGCTGATATGAGAGTTTCCGGTTTGAAAACATCCACTTTAAGAGTCGAGCAAAGCTCGTTAACCGGTGAAGCAATGCCGGTTTTGAAAGGAGCGAATCTTGTAGTCATGGATGATTGTGAACTGCAAGGGAAAGAAAATATGGTTTTCGCTGGAACAACGGTTGTTAACGGAAGCTGCGTTTGCATTGTGACAAGTATAGGTATGGATACGGAGATCGGGAAAATCCAGAGACAGATTCACGAGGCGTCGCTTGAAGAGAGCGAGACTCCGTTAAAGAAGAAGCTAGACGAGTTTGGGAGTAGATTGACTACAGCTATTTGCATTGTCTGTGTTCTTGTGTGGATGATAAACTACAAGAACTTTGTTTCTTGGGATGTTGTGGATGGCTATAAACCTGTGAATATCAAGTTTTCATTCGAGAAATGTACTTACTACTTCAAAATCGCTGTTGCTCTCGCAGTGGCAGCGATACCCGAGGGTTTACCCGCTGTGATCACGACATGTTTAGCTTTAGGGACGAGGAAAATGGCGCAGAAGAACGCGATAGTGAGGAAGCTCCCGAGTGTAGAGACACTCGGTTGCACAACTGTGATCTGTTCAGATAAAACCGGGACTTTAACAACAAACCAGATGTCTGCAACCGAATTCTTCACATTAGGCGGTAAAACAACGACTACTCGAGTGTTTTCAGTCAGTGGTACGACTTATGATCCTAAAGATGGTGGAATTGTGGATTGGGGCTGCAACAATATGGATGCTAACTTGCAAGCTGTTGCTGAGATATGTTCAATTTGTAATGATGCTGGAGTGTTCTATGAAGGGAAGTTGTTTAGAGCAACAGGTTTGCCTACAGAAGCAGCATTGAAAGTTCTTGTTGAGAAGATGGGTATCCCGGAGAAGAAGAACAGTGAGAACATCGAGGAAGTTACAAACTTTTCAGACAATGGTAGCTCAGTGAAGCTAGCTTGTTGCGATTGGTGGAACAAAAGATCGAAAAAGGTAGCGACATTAGAGTTTGATCGCGTTCGTAAGTCCATGAGTGTTATTGTGAGCGAACCAAATGGACAAAACCGGCTTCTCGTTAAGGGTGCTGCTGAGAGTATACTTGAGAGAAGTTCTTTTGCACAGCTTGCTGATGGATCTCTTGTAGCTTTAGATGAATCTAGCAGAGAAGTAATCCTTAAGAAACATTCTGAAATGACTTCAAAAGGATTAAGATGTTTAGGATTAGCTTACAAAGACGAATTAGGAGAGTTTTCGGATTACTCTTCCGAAGAACATCCTTCACACAAGAAGCTTTTGGACCCTTCTAGCTATTCGAACATCGAAACAAATCTAATCTTTGTTGGAGTTGTTGGTCTAAGAGATCCTCCGCGTGAAGAAGTTGGAAGAGCAATTGAAGATTGCAGAGACGCAGGGATAAGAGTAATGGTTATAACTGGAGATAACAAATCAACAGCTGAAGCTATTTGTTGTGAAATTAGATTGTTTTCGGAGAATGAAGATCTTTCGCAGAGTAGCTTCACTGGTAAAGAGTTTATGTCTCTTCCGGCTTCACGGAGATCCGAGATTCTGTCAAAATCTGGAGGGAAAGTGTTCTCTCGAGCTGAGCCAAGGCATAAGCAAGAAATCGTTAGGATGCTTAAGGAAATGGGAGAAATAGTTGCCATGACAGGTGATGGTGTGAATGATGCTCCTGCTTTGAAACTTGCTGACATTGGTATCGCCATGGGAATCACTGGAACTGAGGTTGCCAAAGAAGCTTCGGATATGGTTCTTGCAGATGATAATTTCAGTACTATAGTATCAGCTGTAGCAGAAGGTCGGTCCATTTACAACAATATGAAAGCTTTTATCAGGTATATGATATCATCAAACGTTGGAGAAGTAATCTCCATCTTCTTAACCGCGGCATTGGGGATACCGGAATGTATGATACCGGTTCAGCTTCTTTGGGTTAATCTTGTAACTGATGGTCCTCCTGCTACTGCGTTAGGCTTCAATCCAGCTGATATTGATATCATGAAGAAGCCACCCCGCAAAAGCGATGATTGTCTCATTGATTCATGGGTTCTTATTCGATATCTAGTGATTGGTTCTTATGTTGGAGTTGCAACTGTTGGAATCTTTGTCTTGTGGTACACACAAGCTTCATTCCTTGGGATTAGCCTAATCTCAGATGGACACACATTGGTTAGCTTCACTCAGCTTCAGAACTGGTCAGAGTGTTCTTCGTGGGGAACGAACTTCACGGCGACTCCTTACACAGTCGCAGGTGGTCTTAGGACCATCGCGTTTGAGAACAATCCTTGCGATTACTTCACTCTCGGGAAAGTCAAGCCAATGACATTATCACTCACCGTTCTTGTGGCTATCGAAATGTTTAACTCGCTGAACGCGTTGTCTGAAGACAACAGTCTCTTAACGATGCCACCATGGAGAAACCCTTGGCTACTAGTGGCCATGACTGTCTCCTTTGCGCTACACTGTGTCATCCTCTATGTTCCTTTCTTAGCTAATGTGTTTGGGATTGTGCCTTTGAGTTTCAGGGAATGGTTTGTGGTTATTCTTGTTTCCTTCCCTGTGATTCTGATCGATGAAGCTCTCAAGTTCATTGGGAGATGCAGAAGGACAAGAATCAAGAAGAAGATCAAGACAATGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005215 GO:0005388 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0008150 GO:0008324 GO:0012505 GO:0015075 GO:0015085 GO:0015318 GO:0015399 GO:0015405 GO:0015662 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019829 GO:0022804 GO:0022853 GO:0022857 GO:0022890 GO:0030001 GO:0030176 GO:0031224 GO:0031227 GO:0031984 GO:0034220 GO:0042175 GO:0042623 GO:0042625 GO:0042626 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0046873 GO:0051179 GO:0051234 GO:0055085 GO:0070588 GO:0070838 GO:0072511 GO:0090662 GO:0098655 GO:0098660 GO:0098662 GO:0098827 GO:0099131 GO:0099132

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cation_ATPase Cation_ATPase_C Cation_ATPase_N E1-E2_ATPase Hydrolase Hydrolase_3

Protein Analysis

1054

Amino Acids

115.83

Weight (kDa)

5.36

Isoelectric Point (pI)

36.31

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cation_ATPase_N	PF00690	10 - 77	3.5e-20	Cation transporter/ATPase, N-terminus
E1-E2_ATPase	PF00122	130 - 246	1e-26	P-type ATPase actuator domain
Cation_ATPase	PF13246	422 - 628	5.7e-40	P-type ATPase, cytoplasmic domain N
Hydrolase	PF00702	615 - 739	4.9e-11	haloacid dehalogenase-like hydrolase
Cation_ATPase_C	PF00689	810 - 1039	6.6e-47	Cation transporting ATPase, C-terminus

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0007610)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G00900 AT4G00900
fragaria_vesca	FvH4_7g17100 FvH4_7g17100 FvH4_7g17100 FvH4_7g17100
malus_domestica	MD07G1154700.v1.1
prunus_persica	Prupe.2G193300_v2.0.a1 Prupe.2G193300_v2.0.a1 Prupe.2G193300_v2.0.a1 Prupe.2G193300_v2.0.a1 Prupe.2G193300_v2.0.a1
rosa_chinensis	RchiOBHm_Chr1g0360511
rosa_laevigata	RLG00000027800
rosa_multiflora	Rmu_ssc0000337.1_g000006
rosa_roxburghii	Rroxscaffold_4G00296030
rosa_rugosa	Rorug01G0279000 Rorug01G0279100 Rorug01G0279200 Rorug01G0279300 Rorug01G0279400
rosa_samantha	Rh1AG291600 Rh1CG274300
rosa_wichuraiana	Rw1G025830

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1937
AarI	CACCTGC	1 cut(s)	2765
Acc36I	ACCTGC	1 cut(s)	2765
AccI	GTMKAC	1 cut(s)	1603
AccII	CGCG	6 cut(s)	1043, 1524, 1876, 2411, 2795, 2900
AciI	CCGC	7 cut(s)	109, 987, 1161, 1874, 2409, 2411, 2539
AclI	AACGTT	1 cut(s)	2379
AclWI	GGATC	4 cut(s)	1205, 1648, 1862, 2058
AcoI	YGGCCR	1 cut(s)	2961
AcsI	RAATTY	1 cut(s)	1145
AcuI	CTGAAG	3 cut(s)	1983, 2696, 2928
AcyI	GRCGYC	1 cut(s)	746
AfaI	GTAC	6 cut(s)	62, 122, 928, 1201, 2299, 2642
AfiI	CCNNNNNNNGG	1 cut(s)	1220
AflII	CTTAAG	2 cut(s)	1682, 2144
AflIII	ACRYGT	2 cut(s)	1001, 2898
AgeI	ACCGGT	2 cut(s)	563, 2440
AhlI	ACTAGT	1 cut(s)	2956
AjnI	CCWGG	1 cut(s)	460
AjuI	GAANNNNNNNTTGG	2 cut(s)	1219, 1251
AleI	CACNNNNGTG	1 cut(s)	1088
AloI	GAACNNNNNNTCC	1 cut(s)	34
Alw26I	GTCTC	8 cut(s)	724, 758, 1064, 1905, 2049, 2561, 2924, 2977
AlwI	GGATC	4 cut(s)	1205, 1648, 1862, 2058
Ama87I	CYCGRG	5 cut(s)	974, 1060, 1179, 2103, 2828
AoxI	GGCC	2 cut(s)	282, 2961
ApeKI	GCWGC	6 cut(s)	218, 675, 965, 1242, 1358, 1592
ApoI	RAATTY	1 cut(s)	1145
ArsI	GACNNNNNNTTYG	4 cut(s)	97, 129, 1118, 1150
AsiGI	ACCGGT	2 cut(s)	563, 2440
Asp700I	GAANNNNTTC	2 cut(s)	17, 2096
AspLEI	GCGC	2 cut(s)	1033, 2983
AspS9I	GGNCC	4 cut(s)	1804, 2328, 2477, 2787
AsuC2I	CCSGG	2 cut(s)	1111, 1394
AsuHPI	GGTGA	4 cut(s)	263, 578, 2189, 2851
AsuII	TTCGAA	1 cut(s)	1820
AsuNHI	GCTAGC	1 cut(s)	1462
AvaI	CYCGRG	5 cut(s)	974, 1060, 1179, 2103, 2828
AvaII	GGWCC	4 cut(s)	1804, 2328, 2477, 2787
BaeI	ACNNNNGTAYC	6 cut(s)	183, 216, 2206, 2239, 2289, 2322
BalI	TGGCCA	1 cut(s)	2963
BauI	CACGAG	1 cut(s)	740
BbsI	GAAGAC	1 cut(s)	2916
BbvI	GCAGC	6 cut(s)	205, 662, 977, 1229, 1370, 1579
BceAI	ACGGC	3 cut(s)	96, 277, 2769
BciT130I	CCWGG	1 cut(s)	462
BciVI	GTATCC	3 cut(s)	700, 1400, 2415
BclI	TGATCA	1 cut(s)	993
BcnI	CCSGG	2 cut(s)	1111, 1394
BcoDI	GTCTC	8 cut(s)	724, 758, 1064, 1905, 2049, 2561, 2924, 2977
BcuI	ACTAGT	1 cut(s)	2956
BfaI	CTAG	8 cut(s)	90, 447, 785, 1463, 1665, 1812, 2588, 2957
BfmI	CTRYAG	4 cut(s)	810, 1350, 2301, 2313
BfrI	CTTAAG	2 cut(s)	1682, 2144
BfuAI	ACCTGC	1 cut(s)	2765
BfuI	GTATCC	3 cut(s)	700, 1400, 2415
BglI	GCCNNNNNGGC	1 cut(s)	163
BglII	AGATCT	1 cut(s)	2005
BisI	GCNGC	7 cut(s)	219, 676, 966, 1243, 1359, 1593, 2412
BlpI	GCTNAGC	1 cut(s)	2109
BlsI	GCNGC	7 cut(s)	220, 677, 967, 1244, 1360, 1594, 2413
BmcAI	AGTACT	1 cut(s)	2299
Bme1390I	CCNGG	3 cut(s)	462, 1111, 1394
Bme18I	GGWCC	4 cut(s)	1804, 2328, 2477, 2787
BmeT110I	CYCGRG	5 cut(s)	974, 1060, 1179, 2103, 2828
BmgT120I	GGNCC	4 cut(s)	1804, 2328, 2477, 2787
BmiI	GGNNCC	1 cut(s)	1806
BmrFI	CCNGG	3 cut(s)	462, 1111, 1394
BmsI	GCATC	8 cut(s)	175, 378, 1246, 1291, 2130, 2182, 2919, 3113
BmtI	GCTAGC	1 cut(s)	1466
BoxI	GACNNNNGTC	1 cut(s)	2916
BpiI	GAAGAC	1 cut(s)	2916
BplI	GAGNNNNNCTC	4 cut(s)	539, 571, 751, 783
BpmI	CTGGAG	3 cut(s)	1326, 1962, 2106
Bpu10I	CCTNAGC	2 cut(s)	141, 265
Bpu1102I	GCTNAGC	1 cut(s)	2109
Bpu14I	TTCGAA	1 cut(s)	1820
BpuEI	CTTGAG	3 cut(s)	392, 1628, 3092
BpuMI	CCSGG	2 cut(s)	1111, 1394
Bsa29I	ATCGAT	1 cut(s)	3096
BsaBI	GATNNNNATC	2 cut(s)	1388, 3092
BsaHI	GRCGYC	1 cut(s)	746
BsaJI	CCNNGG	8 cut(s)	461, 975, 2114, 2229, 2409, 2659, 2936, 2948
BsaWI	WCCGGW	4 cut(s)	518, 563, 2425, 2440
Bsc4I	CCNNNNNNNGG	1 cut(s)	1220
Bse118I	RCCGGY	4 cut(s)	563, 577, 1572, 2440
Bse1I	ACTGG	4 cut(s)	1945, 2032, 2245, 2723
Bse3DI	GCAATG	3 cut(s)	53, 398, 579
Bse8I	GATNNNNATC	2 cut(s)	1388, 3092
BseBI	CCWGG	1 cut(s)	462
BseCI	ATCGAT	1 cut(s)	3096
BseDI	CCNNGG	8 cut(s)	461, 975, 2114, 2229, 2409, 2659, 2936, 2948
BseGI	GGATG	9 cut(s)	530, 616, 849, 880, 889, 1261, 1780, 2145, 2994
BseJI	GATNNNNATC	2 cut(s)	1388, 3092
BseLI	CCNNNNNNNGG	1 cut(s)	1220
BseMI	GCAATG	3 cut(s)	53, 398, 579
BseMII	CTCAG	9 cut(s)	279, 351, 1269, 1467, 1587, 2100, 2238, 2691, 2720
BseNI	ACTGG	4 cut(s)	1945, 2032, 2245, 2723
BseRI	GAGGAG	2 cut(s)	20, 23
BseXI	GCAGC	6 cut(s)	205, 662, 977, 1229, 1370, 1579
Bsh1236I	CGCG	6 cut(s)	1043, 1524, 1876, 2411, 2795, 2900
BshFI	GGCC	2 cut(s)	284, 2963
BshTI	ACCGGT	2 cut(s)	563, 2440
BshVI	ATCGAT	1 cut(s)	3096
BsiHKCI	CYCGRG	5 cut(s)	974, 1060, 1179, 2103, 2828
BsiSI	CCGG	9 cut(s)	519, 564, 578, 1110, 1394, 1573, 2051, 2426, 2441
BslFI	GGGAC	3 cut(s)	482, 1030, 1126
BslI	CCNNNNNNNGG	1 cut(s)	1220
BsmAI	GTCTC	8 cut(s)	724, 758, 1064, 1905, 2049, 2561, 2924, 2977
BsmBI	CGTCTC	1 cut(s)	1905
BsmFI	GGGAC	3 cut(s)	482, 1030, 1126
BsnI	GGCC	2 cut(s)	284, 2963
BsoBI	CYCGRG	5 cut(s)	974, 1060, 1179, 2103, 2828
Bsp119I	TTCGAA	1 cut(s)	1820
Bsp1720I	GCTNAGC	1 cut(s)	2109
Bsp19I	CCATGG	2 cut(s)	2229, 2936
BspACI	CCGC	7 cut(s)	109, 987, 1161, 1874, 2409, 2411, 2539
BspANI	GGCC	2 cut(s)	284, 2963
BspCNI	CTCAG	9 cut(s)	278, 352, 1270, 1466, 1588, 2101, 2239, 2690, 2719
BspDI	ATCGAT	1 cut(s)	3096
BspFNI	CGCG	6 cut(s)	1043, 1524, 1876, 2411, 2795, 2900
BspHI	TCATGA	1 cut(s)	2523
BspLI	GGNNCC	1 cut(s)	1806
BspMI	ACCTGC	1 cut(s)	2765
BspOI	GCTAGC	1 cut(s)	1466
BspPI	GGATC	4 cut(s)	1205, 1648, 1862, 2058
BspQI	GCTCTTC	1 cut(s)	1885
BspT104I	TTCGAA	1 cut(s)	1820
BspTI	CTTAAG	2 cut(s)	1682, 2144
BsrDI	GCAATG	3 cut(s)	53, 398, 579
BsrFI	RCCGGY	4 cut(s)	563, 577, 1572, 2440
BsrI	ACTGG	4 cut(s)	1945, 2032, 2245, 2723
BssAI	RCCGGY	4 cut(s)	563, 577, 1572, 2440
BssECI	CCNNGG	8 cut(s)	461, 975, 2114, 2229, 2409, 2659, 2936, 2948
BssNAI	GTATAC	1 cut(s)	1604
BssNI	GRCGYC	1 cut(s)	746
BssSI	CACGAG	1 cut(s)	740
BssT1I	CCWWGG	5 cut(s)	2114, 2229, 2659, 2936, 2948
Bst1107I	GTATAC	1 cut(s)	1604
Bst2BI	CACGAG	1 cut(s)	740
Bst2UI	CCWGG	1 cut(s)	462
Bst6I	CTCTTC	4 cut(s)	750, 1774, 1885, 2052
BstACI	GRCGYC	1 cut(s)	746
BstAFI	CTTAAG	2 cut(s)	1682, 2144
BstAPI	GCANNNNNTGC	1 cut(s)	1631
BstBI	TTCGAA	1 cut(s)	1820
BstC8I	GCNNGC	6 cut(s)	138, 155, 444, 1269, 1464, 1632
BstDSI	CCRYGG	3 cut(s)	2229, 2409, 2936
BstF5I	GGATG	9 cut(s)	530, 616, 849, 880, 889, 1261, 1780, 2145, 2994
BstFNI	CGCG	6 cut(s)	1043, 1524, 1876, 2411, 2795, 2900
BstHHI	GCGC	2 cut(s)	1033, 2983
BstMAI	GTCTC	8 cut(s)	724, 758, 1064, 1905, 2049, 2561, 2924, 2977
BstMWI	GCNNNNNNNGC	8 cut(s)	163, 365, 374, 439, 681, 965, 1631, 2261
BstNI	CCWGG	1 cut(s)	462
BstNSI	RCATGY	1 cut(s)	1005
BstPAI	GACNNNNGTC	1 cut(s)	2916
BstSCI	CCNGG	3 cut(s)	460, 1109, 1392
BstSFI	CTRYAG	4 cut(s)	810, 1350, 2301, 2313
BstUI	CGCG	6 cut(s)	1043, 1524, 1876, 2411, 2795, 2900
BstV1I	GCAGC	6 cut(s)	205, 662, 977, 1229, 1370, 1579
BstV2I	GAAGAC	1 cut(s)	2916
BstX2I	RGATCY	4 cut(s)	1640, 1867, 2005, 2063
BstYI	RGATCY	4 cut(s)	1640, 1867, 2005, 2063
BstZ17I	GTATAC	1 cut(s)	1604
Bsu15I	ATCGAT	1 cut(s)	3096
BsuI	GTATCC	3 cut(s)	700, 1400, 2415
BsuRI	GGCC	2 cut(s)	284, 2963
BsuTUI	ATCGAT	1 cut(s)	3096
BtgI	CCRYGG	3 cut(s)	2229, 2409, 2936
BtgZI	GCGATG	2 cut(s)	2562, 2776
BtsCI	GGATG	9 cut(s)	530, 616, 849, 880, 889, 1261, 1780, 2145, 2994
BtsI	GCAGTG	1 cut(s)	966
BtsIMutI	CAGTG	7 cut(s)	966, 1201, 1414, 1461, 2025, 2238, 2986
BveI	ACCTGC	1 cut(s)	2765
Cac8I	GCNNGC	6 cut(s)	138, 155, 444, 1269, 1464, 1632
CciI	TCATGA	1 cut(s)	2523
CfoI	GCGC	2 cut(s)	1033, 2983
Cfr10I	RCCGGY	4 cut(s)	563, 577, 1572, 2440
Cfr13I	GGNCC	4 cut(s)	1804, 2328, 2477, 2787
Cfr42I	CCGCGG	1 cut(s)	2412
ClaI	ATCGAT	1 cut(s)	3096
CseI	GACGC	2 cut(s)	735, 1922
Csp6I	GTAC	6 cut(s)	61, 121, 927, 1200, 2298, 2641
CspAI	ACCGGT	2 cut(s)	563, 2440
CviAII	CATG	9 cut(s)	607, 1002, 1537, 2170, 2230, 2524, 2568, 2937, 2965
CviQI	GTAC	6 cut(s)	61, 121, 927, 1200, 2298, 2641
DraI	TTTAAA	1 cut(s)	324
EaeI	YGGCCR	1 cut(s)	2961
Eam1104I	CTCTTC	4 cut(s)	750, 1774, 1885, 2052
EarI	CTCTTC	4 cut(s)	750, 1774, 1885, 2052
EciI	GGCGGA	1 cut(s)	98
Eco130I	CCWWGG	5 cut(s)	2114, 2229, 2659, 2936, 2948
Eco147I	AGGCCT	1 cut(s)	284
Eco32I	GATATC	3 cut(s)	2370, 2521, 2585
Eco47I	GGWCC	4 cut(s)	1804, 2328, 2477, 2787
Eco57I	CTGAAG	3 cut(s)	1983, 2696, 2928
Eco88I	CYCGRG	5 cut(s)	974, 1060, 1179, 2103, 2828
EcoRI	GAATTC	1 cut(s)	1145
EcoRII	CCWGG	1 cut(s)	460
EcoRV	GATATC	3 cut(s)	2370, 2521, 2585
EcoT14I	CCWWGG	5 cut(s)	2114, 2229, 2659, 2936, 2948
ErhI	CCWWGG	5 cut(s)	2114, 2229, 2659, 2936, 2948
Esp3I	CGTCTC	1 cut(s)	1905
FaeI	CATG	9 cut(s)	610, 1005, 1540, 2173, 2233, 2527, 2571, 2940, 2968
FalI	AAGNNNNNCTT	2 cut(s)	1665, 1697
FaqI	GGGAC	3 cut(s)	482, 1030, 1126
FatI	CATG	9 cut(s)	606, 1001, 1536, 2169, 2229, 2523, 2567, 2936, 2964
FauI	CCCGC	2 cut(s)	994, 2546
FbaI	TGATCA	1 cut(s)	993
FblI	GTMKAC	1 cut(s)	1603
Fnu4HI	GCNGC	7 cut(s)	219, 676, 966, 1243, 1359, 1593, 2412
FokI	GGATG	9 cut(s)	517, 623, 856, 887, 896, 1268, 1767, 2152, 2981
Fsp4HI	GCNGC	7 cut(s)	219, 676, 966, 1243, 1359, 1593, 2412
FspBI	CTAG	8 cut(s)	90, 447, 785, 1463, 1665, 1812, 2588, 2957
GlaI	GCGC	2 cut(s)	1032, 2982
GluI	GCNGC	7 cut(s)	219, 676, 966, 1243, 1359, 1593, 2412
GsuI	CTGGAG	3 cut(s)	1326, 1962, 2106
HaeIII	GGCC	2 cut(s)	284, 2963
HapII	CCGG	9 cut(s)	519, 564, 578, 1110, 1394, 1573, 2051, 2426, 2441
HgaI	GACGC	2 cut(s)	735, 1922
HhaI	GCGC	2 cut(s)	1033, 2983
Hin1I	GRCGYC	1 cut(s)	746
Hin1II	CATG	9 cut(s)	610, 1005, 1540, 2173, 2233, 2527, 2571, 2940, 2968
Hin6I	GCGC	2 cut(s)	1031, 2981
HinP1I	GCGC	2 cut(s)	1031, 2981
HincII	GTYRAC	2 cut(s)	561, 667
HindII	GTYRAC	2 cut(s)	561, 667
HindIII	AAGCTT	4 cut(s)	1796, 2262, 2349, 2649
HpaI	GTTAAC	2 cut(s)	561, 667
HpaII	CCGG	9 cut(s)	519, 564, 578, 1110, 1394, 1573, 2051, 2426, 2441
HphI	GGTGA	4 cut(s)	263, 578, 2189, 2851
Hpy166II	GTNNAC	6 cut(s)	561, 620, 667, 983, 1604, 2643
Hpy8I	GTNNAC	6 cut(s)	561, 620, 667, 983, 1604, 2643
Hpy99I	CGWCG	2 cut(s)	191, 751
HpyAV	CCTTC	6 cut(s)	1313, 1794, 1818, 2315, 3088, 3123
HpyCH4IV	ACGT	1 cut(s)	2379
HpyF10VI	GCNNNNNNNGC	8 cut(s)	163, 365, 374, 439, 681, 965, 1631, 2261
HpySE526I	ACGT	1 cut(s)	2379
Hsp92I	GRCGYC	1 cut(s)	746
Hsp92II	CATG	9 cut(s)	610, 1005, 1540, 2173, 2233, 2527, 2571, 2940, 2968
HspAI	GCGC	2 cut(s)	1031, 2981
Ksp22I	TGATCA	1 cut(s)	993
KspAI	GTTAAC	2 cut(s)	561, 667
KspI	CCGCGG	1 cut(s)	2412
LguI	GCTCTTC	1 cut(s)	1885
LmnI	GCTCC	3 cut(s)	590, 1062, 2200
Lsp1109I	GCAGC	6 cut(s)	205, 662, 977, 1229, 1370, 1579
LweI	GCATC	8 cut(s)	175, 378, 1246, 1291, 2130, 2182, 2919, 3113
MaeI	CTAG	8 cut(s)	90, 447, 785, 1463, 1665, 1812, 2588, 2957
MaeII	ACGT	1 cut(s)	2379
MaeIII	GTNAC	3 cut(s)	688, 1426, 2467
MfeI	CAATTG	1 cut(s)	1896
MflI	RGATCY	4 cut(s)	1640, 1867, 2005, 2063
MlsI	TGGCCA	1 cut(s)	2963
MluCI	AATT	9 cut(s)	182, 436, 1145, 1227, 1290, 1745, 1896, 1980, 2290
MluI	ACGCGT	1 cut(s)	2898
MluNI	TGGCCA	1 cut(s)	2963
MlyI	GAGTC	3 cut(s)	552, 760, 2752
MmeI	TCCRAC	5 cut(s)	1828, 1867, 2362, 2587, 2602
Mox20I	TGGCCA	1 cut(s)	2963
MroXI	GAANNNNTTC	2 cut(s)	17, 2096
MscI	TGGCCA	1 cut(s)	2963
MslI	CAYNNNNRTG	1 cut(s)	1088
Msp20I	TGGCCA	1 cut(s)	2963
MspA1I	CMGCKG	5 cut(s)	989, 1961, 2312, 2411, 2510
MspCI	CTTAAG	2 cut(s)	1682, 2144
MspI	CCGG	9 cut(s)	519, 564, 578, 1110, 1394, 1573, 2051, 2426, 2441
MspR9I	CCNGG	3 cut(s)	462, 1111, 1394
MunI	CAATTG	1 cut(s)	1896
MvaI	CCWGG	1 cut(s)	462
MvnI	CGCG	6 cut(s)	1043, 1524, 1876, 2411, 2795, 2900
MwoI	GCNNNNNNNGC	8 cut(s)	163, 365, 374, 439, 681, 965, 1631, 2261
NciI	CCSGG	2 cut(s)	1111, 1394
NcoI	CCATGG	2 cut(s)	2229, 2936
NheI	GCTAGC	1 cut(s)	1462
NlaIII	CATG	9 cut(s)	610, 1005, 1540, 2173, 2233, 2527, 2571, 2940, 2968
NlaIV	GGNNCC	1 cut(s)	1806
NmuCI	GTSAC	1 cut(s)	688
NspI	RCATGY	1 cut(s)	1005
NspV	TTCGAA	1 cut(s)	1820
OliI	CACNNNNGTG	1 cut(s)	1088
PaeR7I	CTCGAG	2 cut(s)	1179, 2103
PagI	TCATGA	1 cut(s)	2523
PaqCI	CACCTGC	1 cut(s)	2765
PceI	AGGCCT	1 cut(s)	284
PciI	ACATGT	1 cut(s)	1001
PciSI	GCTCTTC	1 cut(s)	1885
PcsI	WCGNNNNNNNCGW	5 cut(s)	23, 129, 675, 2741, 2897
PdmI	GAANNNNTTC	2 cut(s)	17, 2096
PfoI	TCCNGGA	1 cut(s)	1392
PinAI	ACCGGT	2 cut(s)	563, 2440
PkrI	GCNGC	7 cut(s)	220, 677, 967, 1244, 1360, 1594, 2413
PleI	GAGTC	3 cut(s)	551, 760, 2752
PpsI	GAGTC	3 cut(s)	551, 760, 2752
PscI	ACATGT	1 cut(s)	1001
PshAI	GACNNNNGTC	1 cut(s)	2916
PsiI	TTATAA	1 cut(s)	1937
Psp1406I	AACGTT	1 cut(s)	2379
Psp6I	CCWGG	1 cut(s)	460
PspGI	CCWGG	1 cut(s)	460
PspN4I	GGNNCC	1 cut(s)	1806
PspPI	GGNCC	4 cut(s)	1804, 2328, 2477, 2787
PspXI	VCTCGAGB	1 cut(s)	1179
PsuI	RGATCY	4 cut(s)	1640, 1867, 2005, 2063
PvuII	CAGCTG	3 cut(s)	1961, 2312, 2510
RsaI	GTAC	6 cut(s)	62, 122, 928, 1201, 2299, 2642
RsaNI	GTAC	6 cut(s)	61, 121, 927, 1200, 2298, 2641
RseI	CAYNNNNRTG	1 cut(s)	1088
SacII	CCGCGG	1 cut(s)	2412
SapI	GCTCTTC	1 cut(s)	1885
SatI	GCNGC	7 cut(s)	219, 676, 966, 1243, 1359, 1593, 2412
Sau96I	GGNCC	4 cut(s)	1804, 2328, 2477, 2787
ScaI	AGTACT	1 cut(s)	2299
SchI	GAGTC	3 cut(s)	552, 760, 2752
ScrFI	CCNGG	3 cut(s)	462, 1111, 1394
SfaNI	GCATC	8 cut(s)	175, 378, 1246, 1291, 2130, 2182, 2919, 3113
SfcI	CTRYAG	4 cut(s)	810, 1350, 2301, 2313
Sfr274I	CTCGAG	2 cut(s)	1179, 2103
Sfr303I	CCGCGG	1 cut(s)	2412
SfuI	TTCGAA	1 cut(s)	1820
SgrBI	CCGCGG	1 cut(s)	2412
SinI	GGWCC	4 cut(s)	1804, 2328, 2477, 2787
SlaI	CTCGAG	2 cut(s)	1179, 2103
SmiMI	CAYNNNNRTG	1 cut(s)	1088
SmlI	CTYRAG	7 cut(s)	371, 1179, 1607, 1682, 2103, 2144, 3107
SmoI	CTYRAG	7 cut(s)	371, 1179, 1607, 1682, 2103, 2144, 3107
SpeI	ACTAGT	1 cut(s)	2956
Sse9I	AATT	9 cut(s)	182, 436, 1145, 1227, 1290, 1745, 1896, 1980, 2290
SseBI	AGGCCT	1 cut(s)	284
SsiI	CCGC	7 cut(s)	109, 987, 1161, 1874, 2409, 2411, 2539
SspMI	CTAG	8 cut(s)	90, 447, 785, 1463, 1665, 1812, 2588, 2957
StuI	AGGCCT	1 cut(s)	284
StyD4I	CCNGG	3 cut(s)	460, 1109, 1392
StyI	CCWWGG	5 cut(s)	2114, 2229, 2659, 2936, 2948
TaiI	ACGT	1 cut(s)	2382
TaqII	GACCGA	1 cut(s)	2316
TasI	AATT	9 cut(s)	182, 436, 1145, 1227, 1290, 1745, 1896, 1980, 2290
TatI	WGTACW	3 cut(s)	60, 926, 2297
TauI	GCSGC	1 cut(s)	2414
TscAI	CASTG	7 cut(s)	966, 1201, 1414, 1461, 2032, 2245, 2993
TseFI	GTSAC	1 cut(s)	688
TseI	GCWGC	6 cut(s)	218, 675, 965, 1242, 1358, 1592
Tsp45I	GTSAC	1 cut(s)	688
TspGWI	ACGGA	4 cut(s)	684, 725, 759, 2074
TspRI	CASTG	7 cut(s)	966, 1201, 1414, 1461, 2032, 2245, 2993
Vha464I	CTTAAG	2 cut(s)	1682, 2144
VpaK11BI	GGWCC	4 cut(s)	1804, 2328, 2477, 2787
XapI	RAATTY	1 cut(s)	1145
XceI	RCATGY	1 cut(s)	1005
XhoI	CTCGAG	2 cut(s)	1179, 2103
XmiI	GTMKAC	1 cut(s)	1603
XmnI	GAANNNNTTC	2 cut(s)	17, 2096
XspI	CTAG	8 cut(s)	90, 447, 785, 1463, 1665, 1812, 2588, 2957
ZrmI	AGTACT	1 cut(s)	2299

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.