Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_ssc0000337.1

Orthogroup ID

OG0007610

Physical Location & Seq

Genomic Coordinates Reverse (-)

22035 .. 25759

Gene Structure 3725 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_ssc0000337.1_g000006.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3156 bp

atggacgaaaagccattcccggcatggtcatggtcagttgatcagtgtttgaaagagcatcatgtaaaacttgagaagggtctgggcacttatgaggctgagaagcggcgtgaaaggtatgggtggaatgagcttaccaaagagaaagcgaagcccttatggcggctcgtattagagcagtttgatgacactcttgtgaagatacttctagttgcagcctttatctcgttcgcgttagctttcatgcatggaagtgagtcaggggagtcggggtttgaggcctatgtggaaccatttgtgatagtcttgattctagtgcttaatgccattgttggtgtttggcaagagagcaatgctgaaaaagcacttgaagctcttaaacagatgcaaagtgaatctgcaaaggtgctaagggatgggtatttggtgccggatttgcctgcaagagaacttgttcctggcgatattgtggagttgcgagttggggacaaagtccctgctgacatgagagttgcggttttgaaaacctcaactttgcgagttgagcagagctcattgaccggagaggcaatgcctgttttgaagagcactgatcctatactcatggatgacagtgacctgcaagctaaagagagtatggtttttgcaggcacaacagttgtaaatggtagctgtctttgtatcgttgttagcactgggatgaacaccgagattggcaaaatacaaaagcaaatacatgatgcttctttggaagaagatgacacccctttgaagaagaagctggatgagtttggaagcaagtttactacagcaattgggttcgtttgcctcattgtttgggttatgaactacaaaaacttcatttcatgggatatgaaagatggatggccagtaaatgtgcggttttctttcgagagatgcacttactattttaagatagctgttgcacttgcagtagctgcaatcccagaaggtctccctgctgttattacaacttgcttagctctggggacaaggaagatggcacaaaaaaatgcaattgtgaggaagcttccgagtgtagaaaccttaggatgtactagcgtgatttgctcagataaaactgggactttgacaacaaatcagatgtctgtgacagaattcttcactttgggtgggaaaactacagcttctcgaacaattcatgttcaaggcacaacttatgatcccaaggatgggggaattgttgactggacttgcttcaatatggatgcaaatatgcaagccatggcagaaatatgtgccgtttgcaatgatgctgggatttattttgatggtcagctctttcgagctacaggtttgccaactgaggcagctcttaaggttttggttgaaaagatgggagttccagacgtcaaggcgaggaacaaaattcgtgactcacagcttgctgcaagctacttaattgactccacttcggtgaaattaggctgttgtgagtggtggacaaaaagatcaaaaagggttgccacactagagtttgatcgtgttcgaaagtcaatgagtgttattactcgggggccaactgggcataatcgacttcttgtcaagggtgctgttgagagtttactggagcgaacttcgcatgtgcaacttgcagatggatcccttgttccaatagatgaaccttgtaaacaatcattgcttttgagactcttggagatgagctcaaagggtttgaggtgcttgggttttgcatataaagatgacttgggaaagctctctgattattcttctgggagtcatccagctcacaagatgttgcaggatccagcctgctactcctccatcgaaagtgacttagttttcgtaggaattgttggcttaagagaccctcctcgtgatgaagttagcaaagcaattgaagattgtaaagaagctggaattagagttatggtaataactggagataataagtctacagctgaagctatctgtcaagaaatcaaattgttttcgagaaatgaggatctgaaagggagcagctttacaggaaaagagtttatggctctttcaccatcacaacaaatggaaactttaacaaagccaggagggaaggttttctctcgtgccgagcctagacataagcaagaaatagtacggatgctgaaagagatgggggagattgttgcaatgactggagatggagttaatgatgcaccagcacttaaacttgctgatattggaatcgccatgggcattactggaactgaggtagcaaaagaagcttcagatatggttttggctgatgataatttcagtactattgtttcagctgttgcagagggccgtgccatttacaccaacatgaaagcttttatcaggtacatgatatcttcaaatgttggagaggtaatatccatattcttgactgcggcattgggaatacctgagtgtatgatacctgtgcagcttctgtgggtaaatttggttacagatggaccacctgcaacagctcttggctttaatccagctgacattcacattatgaagaaaccaccacgcaaaagcaaagaagctcttatgaattcttgggttcttttccgttacttggtaattggttcttatgtgggcattgcaactgttggagtcttcatcttgtggtacactcaggcttcattcatgggtatcaatcttgtgagtgatggacatacacttgttgaattatctcagcttcgcaattggggagagtgttcctcgtggtcaaattttacagcagctccgttcatagttaatgggggcaggatgatcgcttttactgacccttgtgactatttttctgttggtaaagtgaaggcaatgactttgtcactctctgtcttggtggcaattgagatgttcaattcccttaatgctctttctgaagacattagcttgctcaaaatgcctccttggaagaacccttggcttttggtcgccatgtcagtctcattcggactccattgcgtcattctctacattccattattagcagatgtgtttggtgttgtcccgttgaatctgaacgaatggcttctggtagttttgatttcagcaccggtgattcttatcgatgaggttctcaagttagtaggaaggagtagacgatggagagcaaagaaggagaagacagcatga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005215 GO:0005388 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0008150 GO:0008324 GO:0012505 GO:0015075 GO:0015085 GO:0015318 GO:0015399 GO:0015405 GO:0015662 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019829 GO:0022804 GO:0022853 GO:0022857 GO:0022890 GO:0030001 GO:0030176 GO:0031224 GO:0031227 GO:0031984 GO:0034220 GO:0042175 GO:0042623 GO:0042625 GO:0042626 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0046873 GO:0051179 GO:0051234 GO:0055085 GO:0070588 GO:0070838 GO:0072511 GO:0090662 GO:0098655 GO:0098660 GO:0098662 GO:0098827 GO:0099131 GO:0099132

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cation_ATPase Cation_ATPase_C Cation_ATPase_N E1-E2_ATPase Hydrolase Hydrolase_3

Protein Analysis

1051

Amino Acids

115.65

Weight (kDa)

6.05

Isoelectric Point (pI)

36.31

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007610)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G00900 AT4G00900
fragaria_vesca	FvH4_7g17100 FvH4_7g17100 FvH4_7g17100 FvH4_7g17100
malus_domestica	MD07G1154700.v1.1
prunus_persica	Prupe.2G193300_v2.0.a1 Prupe.2G193300_v2.0.a1 Prupe.2G193300_v2.0.a1 Prupe.2G193300_v2.0.a1 Prupe.2G193300_v2.0.a1
rosa_chinensis	RchiOBHm_Chr1g0360511
rosa_laevigata	RLG00000027800
rosa_multiflora	Rmu_ssc0000337.1_g000006
rosa_roxburghii	Rroxscaffold_4G00296030
rosa_rugosa	Rorug01G0279000 Rorug01G0279100 Rorug01G0279200 Rorug01G0279300 Rorug01G0279400
rosa_samantha	Rh1AG291600 Rh1CG274300
rosa_wichuraiana	Rw1G025830

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	2494
AatII	GACGTC	1 cut(s)	1395
Acc36I	ACCTGC	2 cut(s)	627, 2494
AccB1I	GGYRCC	1 cut(s)	427
AccI	GTMKAC	2 cut(s)	1958, 3121
AccII	CGCG	1 cut(s)	233
AciI	CCGC	5 cut(s)	106, 163, 515, 901, 2414
AclWI	GGATC	7 cut(s)	587, 1199, 1638, 1651, 1802, 1815, 2016
AcoI	YGGCCR	1 cut(s)	887
AcsI	RAATTY	5 cut(s)	1139, 1410, 2464, 2566, 2746
AcuI	CTGAAG	3 cut(s)	1986, 2253, 2922
AcyI	GRCGYC	1 cut(s)	1392
AfaI	GTAC	5 cut(s)	1078, 2139, 2302, 2366, 2645
AfiI	CCNNNNNNNGG	4 cut(s)	162, 1214, 1215, 2590
AflII	CTTAAG	2 cut(s)	1358, 1864
AgeI	ACCGGT	1 cut(s)	3076
AhdI	GACNNNNNGTC	1 cut(s)	1583
AjnI	CCWGG	2 cut(s)	457, 2086
AleI	CACNNNNGTG	2 cut(s)	194, 1457
AloI	GAACNNNNNNTCC	2 cut(s)	1635, 1667
Alw21I	GWGCWC	3 cut(s)	554, 590, 1709
Alw26I	GTCTC	4 cut(s)	980, 1684, 1863, 2971
AlwI	GGATC	7 cut(s)	587, 1199, 1638, 1651, 1802, 1815, 2016
AlwNI	CAGNNNCTG	2 cut(s)	959, 2455
Ama87I	CYCGRG	1 cut(s)	1554
AoxI	GGCC	4 cut(s)	279, 887, 1559, 2326
ApeKI	GCWGC	7 cut(s)	215, 959, 1352, 1430, 2022, 2449, 2756
ApoI	RAATTY	5 cut(s)	1139, 1410, 2464, 2566, 2746
ArsI	GACNNNNNNTTYG	4 cut(s)	1112, 1144, 1829, 1861
AsiGI	ACCGGT	1 cut(s)	3076
Asp700I	GAANNNNTTC	3 cut(s)	453, 2099, 3051
AspS9I	GGNCC	3 cut(s)	1559, 2326, 2480
AsuC2I	CCSGG	1 cut(s)	20
AsuHPI	GGTGA	3 cut(s)	1471, 2046, 3091
AsuII	TTCGAA	1 cut(s)	1531
AvaI	CYCGRG	1 cut(s)	1554
AvaII	GGWCC	1 cut(s)	2480
AxyI	CCTNAGG	1 cut(s)	1069
BaeGI	GKGCMC	1 cut(s)	89
BalI	TGGCCA	1 cut(s)	889
BamHI	GGATCC	2 cut(s)	1643, 1807
BanI	GGYRCC	1 cut(s)	427
BanII	GRGCYC	2 cut(s)	554, 1709
BarI	GAAGNNNNNNTAC	2 cut(s)	787, 819
BauI	CACGAG	3 cut(s)	1878, 2106, 2737
BbsI	GAAGAC	3 cut(s)	2623, 2910, 3152
Bbv12I	GWGCWC	3 cut(s)	554, 590, 1709
BbvI	GCAGC	7 cut(s)	227, 946, 1364, 1417, 2034, 2461, 2768
BceAI	ACGGC	2 cut(s)	1268, 2313
BcgI	CGANNNNNNTGC	2 cut(s)	2770, 2804
BciT130I	CCWGG	2 cut(s)	459, 2088
BclI	TGATCA	1 cut(s)	40
BcnI	CCSGG	1 cut(s)	20
BcoDI	GTCTC	4 cut(s)	980, 1684, 1863, 2971
BfaI	CTAG	5 cut(s)	209, 314, 1080, 1514, 2118
BfmI	CTRYAG	4 cut(s)	807, 1164, 1332, 1959
BfrI	CTTAAG	2 cut(s)	1358, 1864
BfuAI	ACCTGC	2 cut(s)	627, 2494
BglI	GCCNNNNNGGC	2 cut(s)	160, 1567
BlpI	GCTNAGC	1 cut(s)	1000
BmcAI	AGTACT	1 cut(s)	2302
Bme1390I	CCNGG	3 cut(s)	20, 459, 2088
Bme18I	GGWCC	1 cut(s)	2480
BmeRI	GACNNNNNGTC	1 cut(s)	1583
BmeT110I	CYCGRG	1 cut(s)	1554
BmgT120I	GGNCC	3 cut(s)	1559, 2326, 2480
BmiI	GGNNCC	5 cut(s)	291, 429, 1560, 1645, 1809
BmrFI	CCNGG	3 cut(s)	20, 459, 2088
BmrI	ACTGGG	3 cut(s)	705, 1113, 1575
BmsI	GCATC	8 cut(s)	67, 375, 730, 908, 1240, 1285, 2133, 2185
BmuI	ACTGGG	3 cut(s)	705, 1113, 1575
BpiI	GAAGAC	3 cut(s)	2623, 2910, 3152
BplI	GAGNNNNNCTC	6 cut(s)	536, 568, 1691, 1723, 2720, 2752
BpmI	CTGGAG	3 cut(s)	1631, 1965, 2199
Bpu10I	CCTNAGC	1 cut(s)	410
Bpu1102I	GCTNAGC	1 cut(s)	1000
Bpu14I	TTCGAA	1 cut(s)	1531
BpuEI	CTTGAG	2 cut(s)	92, 3086
BpuMI	CCSGG	1 cut(s)	20
Bsa29I	ATCGAT	1 cut(s)	3090
BsaBI	GATNNNNATC	1 cut(s)	3086
BsaHI	GRCGYC	1 cut(s)	1392
BsaI	GGTCTC	2 cut(s)	980, 1863
BsaJI	CCNNGG	5 cut(s)	1209, 1266, 2232, 2930, 2942
BsaWI	WCCGGW	2 cut(s)	560, 3076
BsaXI	ACNNNNNCTCC	8 cut(s)	257, 287, 2082, 2112, 2172, 2202, 2743, 2773
Bsc4I	CCNNNNNNNGG	4 cut(s)	162, 1214, 1215, 2590
Bse118I	RCCGGY	1 cut(s)	3076
Bse1I	ACTGG	9 cut(s)	700, 890, 1108, 1235, 1570, 1614, 1948, 2182, 2248
Bse21I	CCTNAGG	1 cut(s)	1069
Bse3DI	GCAATG	8 cut(s)	358, 576, 1297, 1679, 2178, 2613, 2844, 2980
Bse8I	GATNNNNATC	1 cut(s)	3086
BseBI	CCWGG	2 cut(s)	459, 2088
BseCI	ATCGAT	1 cut(s)	3090
BseDI	CCNNGG	5 cut(s)	1209, 1266, 2232, 2930, 2942
BseJI	GATNNNNATC	1 cut(s)	3086
BseLI	CCNNNNNNNGG	4 cut(s)	162, 1214, 1215, 2590
BseMI	GCAATG	8 cut(s)	358, 576, 1297, 1679, 2178, 2613, 2844, 2980
BseMII	CTCAG	7 cut(s)	90, 1107, 1338, 2241, 2421, 2663, 2723
BseNI	ACTGG	9 cut(s)	700, 890, 1108, 1235, 1570, 1614, 1948, 2182, 2248
BseRI	GAGGAG	2 cut(s)	1813, 1866
BseSI	GKGCMC	1 cut(s)	89
BseXI	GCAGC	7 cut(s)	227, 946, 1364, 1417, 2034, 2461, 2768
BseYI	CCCAGC	1 cut(s)	1298
BsgI	GTGCAG	1 cut(s)	2468
Bsh1236I	CGCG	1 cut(s)	233
BshFI	GGCC	4 cut(s)	281, 889, 1561, 2328
BshNI	GGYRCC	1 cut(s)	427
BshTI	ACCGGT	1 cut(s)	3076
BshVI	ATCGAT	1 cut(s)	3090
BsiHKAI	GWGCWC	3 cut(s)	554, 590, 1709
BsiHKCI	CYCGRG	1 cut(s)	1554
BsiSI	CCGG	4 cut(s)	20, 431, 561, 3077
BslFI	GGGAC	5 cut(s)	479, 500, 1024, 1120, 3014
BslI	CCNNNNNNNGG	4 cut(s)	162, 1214, 1215, 2590
BsmAI	GTCTC	4 cut(s)	980, 1684, 1863, 2971
BsmFI	GGGAC	5 cut(s)	479, 500, 1024, 1120, 3014
BsnI	GGCC	4 cut(s)	281, 889, 1561, 2328
Bso31I	GGTCTC	2 cut(s)	980, 1863
BsoBI	CYCGRG	1 cut(s)	1554
Bsp119I	TTCGAA	1 cut(s)	1531
Bsp1286I	GDGCHC	4 cut(s)	89, 554, 590, 1709
Bsp143I	GATC	9 cut(s)	40, 592, 1204, 1493, 1522, 1643, 1807, 2008, 2787
Bsp1720I	GCTNAGC	1 cut(s)	1000
Bsp19I	CCATGG	2 cut(s)	1266, 2232
BspACI	CCGC	5 cut(s)	106, 163, 515, 901, 2414
BspANI	GGCC	4 cut(s)	281, 889, 1561, 2328
BspCNI	CTCAG	7 cut(s)	91, 1106, 1339, 2242, 2422, 2662, 2722
BspDI	ATCGAT	1 cut(s)	3090
BspFNI	CGCG	1 cut(s)	233
BspLI	GGNNCC	5 cut(s)	291, 429, 1560, 1645, 1809
BspMI	ACCTGC	2 cut(s)	627, 2494
BspPI	GGATC	7 cut(s)	587, 1199, 1638, 1651, 1802, 1815, 2016
BspQI	GCTCTTC	1 cut(s)	578
BspT104I	TTCGAA	1 cut(s)	1531
BspT107I	GGYRCC	1 cut(s)	427
BspTI	CTTAAG	2 cut(s)	1358, 1864
BspTNI	GGTCTC	2 cut(s)	980, 1863
BsrDI	GCAATG	8 cut(s)	358, 576, 1297, 1679, 2178, 2613, 2844, 2980
BsrFI	RCCGGY	1 cut(s)	3076
BsrI	ACTGG	9 cut(s)	700, 890, 1108, 1235, 1570, 1614, 1948, 2182, 2248
BssAI	RCCGGY	1 cut(s)	3076
BssECI	CCNNGG	5 cut(s)	1209, 1266, 2232, 2930, 2942
BssMI	GATC	9 cut(s)	40, 592, 1204, 1493, 1522, 1643, 1807, 2008, 2787
BssNI	GRCGYC	1 cut(s)	1392
BssSI	CACGAG	3 cut(s)	1878, 2106, 2737
BssT1I	CCWWGG	5 cut(s)	1209, 1266, 2232, 2930, 2942
Bst2BI	CACGAG	3 cut(s)	1878, 2106, 2737
Bst2UI	CCWGG	2 cut(s)	459, 2088
Bst4CI	ACNGT	3 cut(s)	614, 658, 2623
Bst6I	CTCTTC	1 cut(s)	578
BstACI	GRCGYC	1 cut(s)	1392
BstAFI	CTTAAG	2 cut(s)	1358, 1864
BstAPI	GCANNNNNTGC	1 cut(s)	959
BstBI	TTCGAA	1 cut(s)	1531
BstC8I	GCNNGC	8 cut(s)	441, 624, 649, 1263, 1428, 1435, 1816, 2915
BstDSI	CCRYGG	2 cut(s)	1266, 2232
BstFNI	CGCG	1 cut(s)	233
BstKTI	GATC	9 cut(s)	43, 595, 1207, 1496, 1525, 1646, 1810, 2011, 2790
BstMAI	GTCTC	4 cut(s)	980, 1684, 1863, 2971
BstMBI	GATC	9 cut(s)	40, 592, 1204, 1493, 1522, 1643, 1807, 2008, 2787
BstNI	CCWGG	2 cut(s)	459, 2088
BstNSI	RCATGY	1 cut(s)	1628
BstSCI	CCNGG	3 cut(s)	18, 457, 2086
BstSFI	CTRYAG	4 cut(s)	807, 1164, 1332, 1959
BstSLI	GKGCMC	1 cut(s)	89
BstUI	CGCG	1 cut(s)	233
BstV1I	GCAGC	7 cut(s)	227, 946, 1364, 1417, 2034, 2461, 2768
BstV2I	GAAGAC	3 cut(s)	2623, 2910, 3152
BstX2I	RGATCY	3 cut(s)	1643, 1807, 2008
BstYI	RGATCY	3 cut(s)	1643, 1807, 2008
Bsu15I	ATCGAT	1 cut(s)	3090
Bsu36I	CCTNAGG	1 cut(s)	1069
BsuRI	GGCC	4 cut(s)	281, 889, 1561, 2328
BsuTUI	ATCGAT	1 cut(s)	3090
BtgI	CCRYGG	2 cut(s)	1266, 2232
BtsIMutI	CAGTG	4 cut(s)	50, 588, 619, 693
BveI	ACCTGC	2 cut(s)	627, 2494
Cac8I	GCNNGC	8 cut(s)	441, 624, 649, 1263, 1428, 1435, 1816, 2915
CaiI	CAGNNNCTG	2 cut(s)	959, 2455
Cfr10I	RCCGGY	1 cut(s)	3076
Cfr13I	GGNCC	3 cut(s)	1559, 2326, 2480
ClaI	ATCGAT	1 cut(s)	3090
CseI	GACGC	1 cut(s)	2974
Csp6I	GTAC	5 cut(s)	1077, 2138, 2301, 2365, 2644
CspAI	ACCGGT	1 cut(s)	3076
CviQI	GTAC	5 cut(s)	1077, 2138, 2301, 2365, 2644
DpnI	GATC	9 cut(s)	42, 594, 1206, 1495, 1524, 1645, 1809, 2010, 2789
DpnII	GATC	9 cut(s)	40, 592, 1204, 1493, 1522, 1643, 1807, 2008, 2787
DriI	GACNNNNNGTC	1 cut(s)	1583
EaeI	YGGCCR	1 cut(s)	887
Eam1104I	CTCTTC	1 cut(s)	578
Eam1105I	GACNNNNNGTC	1 cut(s)	1583
EarI	CTCTTC	1 cut(s)	578
Ecl136II	GAGCTC	2 cut(s)	552, 1707
Eco130I	CCWWGG	5 cut(s)	1209, 1266, 2232, 2930, 2942
Eco147I	AGGCCT	1 cut(s)	281
Eco24I	GRGCYC	2 cut(s)	554, 1709
Eco31I	GGTCTC	2 cut(s)	980, 1863
Eco32I	GATATC	1 cut(s)	2373
Eco47I	GGWCC	1 cut(s)	2480
Eco53kI	GAGCTC	2 cut(s)	552, 1707
Eco57I	CTGAAG	3 cut(s)	1986, 2253, 2922
Eco81I	CCTNAGG	1 cut(s)	1069
Eco88I	CYCGRG	1 cut(s)	1554
EcoICRI	GAGCTC	2 cut(s)	552, 1707
EcoRI	GAATTC	2 cut(s)	1139, 2566
EcoRII	CCWGG	2 cut(s)	457, 2086
EcoRV	GATATC	1 cut(s)	2373
EcoT14I	CCWWGG	5 cut(s)	1209, 1266, 2232, 2930, 2942
EcoT22I	ATGCAT	1 cut(s)	249
EcoT38I	GRGCYC	2 cut(s)	554, 1709
ErhI	CCWWGG	5 cut(s)	1209, 1266, 2232, 2930, 2942
FalI	AAGNNNNNCTT	2 cut(s)	2544, 2576
FaqI	GGGAC	5 cut(s)	479, 500, 1024, 1120, 3014
FbaI	TGATCA	1 cut(s)	40
FblI	GTMKAC	2 cut(s)	1958, 3121
FriOI	GRGCYC	2 cut(s)	554, 1709
FspBI	CTAG	5 cut(s)	209, 314, 1080, 1514, 2118
GsaI	CCCAGC	1 cut(s)	1302
GsuI	CTGGAG	3 cut(s)	1631, 1965, 2199
HaeIII	GGCC	4 cut(s)	281, 889, 1561, 2328
HapII	CCGG	4 cut(s)	20, 431, 561, 3077
HgaI	GACGC	1 cut(s)	2974
Hin1I	GRCGYC	1 cut(s)	1392
HincII	GTYRAC	1 cut(s)	1228
HindII	GTYRAC	1 cut(s)	1228
HindIII	AAGCTT	3 cut(s)	1049, 2265, 2352
HpaII	CCGG	4 cut(s)	20, 431, 561, 3077
HphI	GGTGA	3 cut(s)	1471, 2046, 3091
Hpy166II	GTNNAC	8 cut(s)	804, 1228, 1485, 1607, 1673, 1959, 2646, 3122
Hpy188I	TCNGA	9 cut(s)	1056, 1096, 1125, 1765, 2013, 2272, 2902, 2975, 3042
Hpy188III	TCNNGA	9 cut(s)	307, 913, 1173, 1388, 1415, 1880, 1979, 1998, 2407
Hpy8I	GTNNAC	8 cut(s)	804, 1228, 1485, 1607, 1673, 1959, 2646, 3122
HpyAV	CCTTC	6 cut(s)	70, 965, 2089, 2827, 3108, 3133
HpyCH4III	ACNGT	3 cut(s)	614, 658, 2623
HpyCH4IV	ACGT	1 cut(s)	1392
HpySE526I	ACGT	1 cut(s)	1392
Hsp92I	GRCGYC	1 cut(s)	1392
Ksp22I	TGATCA	1 cut(s)	40
Kzo9I	GATC	9 cut(s)	40, 592, 1204, 1493, 1522, 1643, 1807, 2008, 2787
LguI	GCTCTTC	1 cut(s)	578
LmnI	GCTCC	3 cut(s)	1612, 2019, 2764
Lsp1109I	GCAGC	7 cut(s)	227, 946, 1364, 1417, 2034, 2461, 2768
LweI	GCATC	8 cut(s)	67, 375, 730, 908, 1240, 1285, 2133, 2185
MaeI	CTAG	5 cut(s)	209, 314, 1080, 1514, 2118
MaeII	ACGT	1 cut(s)	1392
MaeIII	GTNAC	8 cut(s)	614, 1132, 1415, 1835, 2470, 2585, 2807, 2847
MalI	GATC	9 cut(s)	42, 594, 1206, 1495, 1524, 1645, 1809, 2010, 2789
MboI	GATC	9 cut(s)	40, 592, 1204, 1493, 1522, 1643, 1807, 2008, 2787
MfeI	CAATTG	5 cut(s)	813, 1038, 1899, 2719, 2868
MflI	RGATCY	3 cut(s)	1643, 1807, 2008
MhlI	GDGCHC	4 cut(s)	89, 554, 590, 1709
MlsI	TGGCCA	1 cut(s)	889
MluNI	TGGCCA	1 cut(s)	889
MlyI	GAGTC	8 cut(s)	266, 275, 1412, 1442, 1686, 1789, 2637, 2970
MmeI	TCCRAC	2 cut(s)	2365, 2605
Mox20I	TGGCCA	1 cut(s)	889
Mph1103I	ATGCAT	1 cut(s)	249
MroXI	GAANNNNTTC	3 cut(s)	453, 2099, 3051
MscI	TGGCCA	1 cut(s)	889
MslI	CAYNNNNRTG	6 cut(s)	28, 194, 252, 698, 1457, 2345
Msp20I	TGGCCA	1 cut(s)	889
MspA1I	CMGCKG	3 cut(s)	1964, 2315, 2513
MspCI	CTTAAG	2 cut(s)	1358, 1864
MspI	CCGG	4 cut(s)	20, 431, 561, 3077
MspR9I	CCNGG	3 cut(s)	20, 459, 2088
MunI	CAATTG	5 cut(s)	813, 1038, 1899, 2719, 2868
MvaI	CCWGG	2 cut(s)	459, 2088
MvnI	CGCG	1 cut(s)	233
NciI	CCSGG	1 cut(s)	20
NcoI	CCATGG	2 cut(s)	1266, 2232
NdeII	GATC	9 cut(s)	40, 592, 1204, 1493, 1522, 1643, 1807, 2008, 2787
NlaIV	GGNNCC	5 cut(s)	291, 429, 1560, 1645, 1809
NmeAIII	GCCGAG	1 cut(s)	2137
NmuCI	GTSAC	6 cut(s)	614, 1132, 1415, 1835, 2807, 2847
NsiI	ATGCAT	1 cut(s)	249
NspI	RCATGY	1 cut(s)	1628
NspV	TTCGAA	1 cut(s)	1531
OliI	CACNNNNGTG	2 cut(s)	194, 1457
PaqCI	CACCTGC	1 cut(s)	2494
PceI	AGGCCT	1 cut(s)	281
PciSI	GCTCTTC	1 cut(s)	578
PdmI	GAANNNNTTC	3 cut(s)	453, 2099, 3051
PfeI	GAWTC	5 cut(s)	310, 395, 2226, 3037, 3082
PflFI	GACNNNGTC	2 cut(s)	491, 2845
PinAI	ACCGGT	1 cut(s)	3076
PleI	GAGTC	8 cut(s)	265, 274, 1412, 1442, 1686, 1788, 2636, 2970
PpsI	GAGTC	8 cut(s)	265, 274, 1412, 1442, 1686, 1788, 2636, 2970
Psp124BI	GAGCTC	2 cut(s)	554, 1709
Psp6I	CCWGG	2 cut(s)	457, 2086
PspFI	CCCAGC	1 cut(s)	1298
PspGI	CCWGG	2 cut(s)	457, 2086
PspN4I	GGNNCC	5 cut(s)	291, 429, 1560, 1645, 1809
PspPI	GGNCC	3 cut(s)	1559, 2326, 2480
PstNI	CAGNNNCTG	2 cut(s)	959, 2455
PsuI	RGATCY	3 cut(s)	1643, 1807, 2008
PsyI	GACNNNGTC	2 cut(s)	491, 2845
PvuII	CAGCTG	3 cut(s)	1964, 2315, 2513
RsaI	GTAC	5 cut(s)	1078, 2139, 2302, 2366, 2645
RsaNI	GTAC	5 cut(s)	1077, 2138, 2301, 2365, 2644
RseI	CAYNNNNRTG	6 cut(s)	28, 194, 252, 698, 1457, 2345
SacI	GAGCTC	2 cut(s)	554, 1709
SapI	GCTCTTC	1 cut(s)	578
Sau3AI	GATC	9 cut(s)	40, 592, 1204, 1493, 1522, 1643, 1807, 2008, 2787
Sau96I	GGNCC	3 cut(s)	1559, 2326, 2480
ScaI	AGTACT	1 cut(s)	2302
SchI	GAGTC	8 cut(s)	266, 275, 1412, 1442, 1686, 1789, 2637, 2970
ScrFI	CCNGG	3 cut(s)	20, 459, 2088
SduI	GDGCHC	4 cut(s)	89, 554, 590, 1709
SfaNI	GCATC	8 cut(s)	67, 375, 730, 908, 1240, 1285, 2133, 2185
SfcI	CTRYAG	4 cut(s)	807, 1164, 1332, 1959
SfuI	TTCGAA	1 cut(s)	1531
SgrAI	CRCCGGYG	1 cut(s)	3076
SinI	GGWCC	1 cut(s)	2480
SmiMI	CAYNNNNRTG	6 cut(s)	28, 194, 252, 698, 1457, 2345
SmlI	CTYRAG	4 cut(s)	71, 1358, 1864, 3101
SmoI	CTYRAG	4 cut(s)	71, 1358, 1864, 3101
SseBI	AGGCCT	1 cut(s)	281
SsiI	CCGC	5 cut(s)	106, 163, 515, 901, 2414
SspMI	CTAG	5 cut(s)	209, 314, 1080, 1514, 2118
SstI	GAGCTC	2 cut(s)	554, 1709
StuI	AGGCCT	1 cut(s)	281
StyD4I	CCNGG	3 cut(s)	18, 457, 2086
StyI	CCWWGG	5 cut(s)	1209, 1266, 2232, 2930, 2942
TaaI	ACNGT	3 cut(s)	614, 658, 2623
TaiI	ACGT	1 cut(s)	1395
TaqI	TCGA	8 cut(s)	912, 1174, 1327, 1531, 1576, 1830, 1997, 3090
TatI	WGTACW	2 cut(s)	1076, 2300
TauI	GCSGC	3 cut(s)	109, 166, 2417
TfiI	GAWTC	5 cut(s)	310, 395, 2226, 3037, 3082
TscAI	CASTG	4 cut(s)	50, 595, 619, 700
TseFI	GTSAC	6 cut(s)	614, 1132, 1415, 1835, 2807, 2847
TseI	GCWGC	7 cut(s)	215, 959, 1352, 1430, 2022, 2449, 2756
Tsp45I	GTSAC	6 cut(s)	614, 1132, 1415, 1835, 2807, 2847
TspGWI	ACGGA	3 cut(s)	2155, 2573, 2751
TspRI	CASTG	4 cut(s)	50, 595, 619, 700
Tth111I	GACNNNGTC	2 cut(s)	491, 2845
Vha464I	CTTAAG	2 cut(s)	1358, 1864
VpaK11BI	GGWCC	1 cut(s)	2480
XapI	RAATTY	5 cut(s)	1139, 1410, 2464, 2566, 2746
XceI	RCATGY	1 cut(s)	1628
XcmI	CCANNNNNNNNNTGG	1 cut(s)	21
XmiI	GTMKAC	2 cut(s)	1958, 3121
XmnI	GAANNNNTTC	3 cut(s)	453, 2099, 3051
XspI	CTAG	5 cut(s)	209, 314, 1080, 1514, 2118
ZraI	GACGTC	1 cut(s)	1393
ZrmI	AGTACT	1 cut(s)	2302
Zsp2I	ATGCAT	1 cut(s)	249

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.