AT4G03550

1,3-beta-glucan synthase subunit FKS1

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
Physical Location & Seq
Forward (+)
1573266 .. 1579820
6555 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G03550.1

Sequence Viewer

Length: 5343 bp
ATGAGCCTCCGCCACCGCACCGTCCCGCCGCAAACCGGACGGCCGTTGGCGGCGGAAGCTGTCGGAATCGAAGAGGAGCCGTACAATATCATTCCCGTTAACAATCTCCTCGCCGACCATCCTTCACTCCGTTTTCCCGAGGTTCGTGCCGCCGCTGCTGCTCTTAAAACCGTTGGAGACCTTCGTCGTCCGCCGTATGTTCAATGGCGTTCTCACTACGATCTCCTCGACTGGCTCGCCTTGTTCTTCGGTTTCCAGAAAGATAACGTTCGTAACCAGCGTGAGCATATGGTGCTTCATCTCGCAAATGCTCAGATGCGTCTCTCTCCGCCGCCGGATAATATTGATTCTCTCGATTCCGCGGTTGTTCGTCGGTTTCGTCGGAAACTTCTCGCTAACTACTCTAGCTGGTGTTCGTATTTGGGGAAAAAATCAAATATCTGGATCTCAGATCGGAACCCTGATTCGAGACGAGAGCTTCTCTATGTTGGACTCTATCTTCTCATTTGGGGAGAGGCTGCGAATCTTCGGTTCATGCCTGAATGTATCTGTTACATCTTCCATAACATGGCCTCTGAGCTCAACAAAATCTTAGAGGATTGCCTCGATGAGAACACCGGCCAACCTTACTTGCCTTCTCTCTCAGGCGAAAACGCTTTCTTAACCGGCGTCGTTAAACCTATTTACGATACTATCCAAGCTGAGATTGATGAGAGCAAGAACGGTACAGTTGCGCATTGTAAGTGGAGGAACTACGACGATATCAATGAGTACTTCTGGACTGATCGGTGTTTCAGCAAATTGAAATGGCCGCTTGATTTGGGAAGCAATTTCTTTAAGAGTAGAGGCAAAAGTGTAGGGAAAACTGGTTTCGTGGAGCGCAGGACGTTCTTCTACCTTTACAGGAGTTTTGATCGACTTTGGGTGATGCTAGCTTTGTTCCTTCAAGCCGCCATTATAGTAGCTTGGGAGGAAAAGCCAGATACCTCGTCGGTAACAAGGCAGCTGTGGAATGCTCTGAAGGCAAGAGATGTTCAGGTGAGACTATTGACCGTGTTCTTGACATGGAGTGGTATGCGACTCTTGCAGGCTGTGCTGGACGCGGCTTCACAATATCCCCTCGTTTCCAGAGAGACCAAAAGGCATTTTTTCAGAATGCTGATGAAGGTTATAGCTGCCGCAGTTTGGATTGTAGCTTTCACTGTCCTCTACACTAACATCTGGAAGCAGAAGAGGCAAGACAGGCAGTGGTCCAATGCCGCGACGACTAAGATATACCAATTCCTTTACGCTGTGGGGGCCTTCTTGGTGCCCGAAATCCTGGCTTTGGCTTTGTTTATTATCCCATGGATGAGAAACTTCCTGGAAGAGACCAATTGGAAAATATTCTTTGCTCTAACTTGGTGGTTTCAAGGCAAAAGCTTTGTGGGTCGAGGTTTGAGAGAGGGTTTAGTGGACAACATCAAGTACTCGACTTTCTGGATCTTTGTCCTAGCTACAAAGTTTACATTTAGTTACTTCCTGCAGGTTAAGCCAATGATTAAACCCTCAAAGCTGCTATGGAACTTAAAGGATGTCGATTATGAGTGGCATCAGTTTTATGGAGACAGCAATAGGTTTTCTGTCGCATTGTTATGGTTGCCAGTTGTGTTGATATATCTGATGGATATCCAAATTTGGTACGCAATCTATTCTTCGATTGTTGGTGCTGTTGTTGGGCTGTTTGATCATCTGGGGGAGATCAGGGACATGGGACAGCTGAGGCTAAGGTTTCAATTCTTTGCTAGTGCTATTCAATTCAACCTAATGCCTGAGGAACAACTCCTGAATGCTAGAGGCTTTGGTAACAAGTTCAAGGACGGCATTCATAGATTGAAGCTAAGGTATGGATTTGGGAGGCCGTTTAAGAAACTTGAGTCGAATCAGGTCGAGGCCAACAAGTTTGCGTTGATCTGGAACGAAATCATCTTAGCTTTCAGAGAAGAGGATATAGTTTCTGATCGTGAAGTAGAGCTACTGGAGCTGCCAAAGAATTCCTGGGATGTGACGGTTATTCGCTGGCCGTGTTTCTTGTTGTGCAATGAGCTTTTGCTTGCACTGAGCCAGGCCAGAGAGCTGATAGACGCACCTGATAAATGGCTGTGGCACAAAATATGCAAGAATGAATACAGGCGTTGTGCTGTAGTTGAGGCATATGACAGCATCAAACATCTATTGCTCTCAATCATCAAAGTTGACACTGAAGAACATTCGATAATTACGGTCTTCTTTCAGATAATTAATCAGTCCATTCAGTCAGAGCAGTTCACCAAGACCTTTAGAGTGGACCTGCTGCCAAAAATTTATGAAACACTGCAGAAATTGGTTGGGCTGGTAAATGATGAGGAAACAGATAGTGGGCGGGTGGTGAATGTTCTGCAGTCTCTTTATGAGATTGCAACTCGACAGTTCTTTATAGAGAAGAAGACAACTGAACAGCTATCTAATGAAGGTTTAACTCCTCGAGACCCAGCCTCAAAGTTGCTGTTTCAAAATGCTATTAGGCTTCCTGATGCAAGCAATGAAGACTTCTACCGGCAGGTTAGGCGTTTACACACGATTCTCACCTCTAGGGACTCTATGCACAGCGTCCCTGTGAATCTAGAGGCGAGACGGCGGATTGCTTTCTTCAGTAATTCGCTTTTCATGAACATGCCTCATGCCCCTCAGGTTGAGAAAATGATGGCGTTCAGTGTTCTGACTCCATATTACAGTGAGGAAGTTGTATACAGCAAAGAACAGCTCCGAAATGAGACTGAGGATGGGATTTCCACCCTATACTACCTGCAGACAATTTATGCTGATGAATGGAAAAATTTCAAGGAACGGATGCATAGGGAAGGAATCAAGACAGATAGTGAGTTGTGGACAACCAAGCTGAGAGACCTCAGGCTTTGGGCTTCCTACAGAGGTCAGACATTGGCACGTACAGTTCGTGGGATGATGTACTACTACCGGGCTCTTAAGATGCTCGCTTTTCTTGACTCTGCGTCTGAAATGGACATTCGGGAGGGTGCTCAGGAGCTTGGTTCAGTGAGGAATTTGCAGGGAGAACTGGGTGGTCAATCTGATGGGTTTGTCTCTGAAAACGACCGATCTTCCTTAAGCAGAGCAAGTAGTTCCGTGAGTACGCTGTATAAAGGCCATGAGTATGGGACTGCATTGATGAAATTCACATATGTTGTGGCGTGTCAGATCTACGGGTCTCAAAAAGCAAAGAAAGAGCCTCAGGCAGAGGAAATTCTGTATCTGATGAAGCAGAACGAAGCTCTCCGTATTGCATATGTGGATGAGGTGCCTGCGGGAAGAGGAGAGACTGATTATTACTCCGTTCTGGTGAAATACGATCACCAGTTGGAGAAGGAAGTGGAAATATTCCGTGTGAAGCTACCTGGTCCAGTGAAGCTGGGCGAGGGAAAGCCAGAGAACCAGAATCATGCAATGATCTTTACCCGTGGTGATGCTGTTCAGACCATTGATATGAACCAAGACAGTTATTTTGAGGAAGCTCTCAAGATGAGAAATTTGCTCCAGGAGTACAACCATTATCATGGTATCAGAAAACCAACTATTCTTGGTGTCAGGGAGCATATCTTCACGGGATCAGTCTCGTCACTGGCGTGGTTCATGTCTGCTCAGGAGACAAGTTTTGTCACTCTTGGTCAGCGTGTTCTTGCAAACCCACTGAAGGTCAGAATGCATTATGGCCACCCTGATGTATTTGACAGATTCTGGTTCTTGAGTCGAGGCGGCATCAGTAAGGCTTCCAGAGTTATAAATATCAGTGAGGACATCTTTGCCGGGTTTAACTGCACGTTAAGGGGGGGAAACGTCACCCACCACGAGTACATTCAGGTCGGGAAGGGACGGGATGTTGGATTGAATCAGATATCAATGTTTGAGGCTAAGGTAGCCAGTGGGAACGGAGAGCAGGTTCTCAGCCGAGATGTGTACCGGCTCGGGCACAGGCTTGATTTCTTCAGAATGTTATCATTTTTCTACACAACTGTAGGGTTTTTCTTCAACACAATGATGGTCATTCTTACTGTTTACGCTTTCCTCTGGGGACGGGTTTATCTGGCTCTCAGCGGGGTTGAGAAGTCCGCTCTAGCAGACAGTACGGACACCAACGCCGCGCTTGGGGTGATCCTGAACCAGCAGTTCATCATTCAGCTCGGTCTGTTCACTGCCCTGCCAATGATTGTTGAATGGTCTCTCGAGGAGGGTTTCCTTCTAGCGATATGGAATTTCATTCGAATGCAGATTCAGCTTTCAGCTGTCTTCTACACATTCTCAATGGGGACCAGAGCTCACTATTTCGGTCGAACTATTCTCCATGGTGGGGCCAAGTATAGAGCCACTGGACGTGGATTTGTTGTCGAGCACAAGGGATTCACTGAGAACTACCGACTGTATGCACGCAGTCACTTTGTGAAGGCCATCGAGCTTGGGCTGATCCTCATAGTCTACGCTTCGCACAGTCCGATTGCCAAAGACTCGTTGATTTACATAGCCATGACTATCACCAGCTGGTTTCTTGTGATTTCATGGATAATGGCCCCATTTGTGTTTAACCCATCAGGATTCGACTGGCTTAAGACAGTCTATGACTTTGAAGACTTCATGAACTGGATCTGGTACCAAGGCAGAATCTCAACGAAATCTGAACAAAGCTGGGAAAAATGGTGGTACGAGGAACAGGACCACCTGAGAAACACCGGGAAGGCAGGATTATTTGTGGAGATCATCTTGGTCCTCCGGTTTTTCTTCTTCCAGTATGGGATTGTATACCAGCTTAAAATTGCAAACGGATCCACCAGCCTTTTTGTCTACTTGTTCTCATGGATATACATCTTTGCTATATTTGTGCTCTTCCTAGTCATCCAATACGCCCGTGACAAGTACTCGGCAAAAGCTCACATACGGTACAGGCTTGTCCAATTCCTCCTGATCGTGCTTGCTATACTGGTGATTGTTGCTTTGCTCGAGTTCACGCATTTCAGCTTCATCGATATCTTCACAAGCCTTCTTGCATTCATCCCAACTGGCTGGGGAATTCTGCTGATCGCACAGACTCAAAGGAAGTGGCTGAAGAATTACACTATTTTCTGGAATGCTGTTGTCTCTGTTGCTCGCATGTATGACATATTGTTTGGGATACTCATAATGGTTCCAGTAGCGTTCTTGTCATGGATGCCTGGATTCCAGTCAATGCAAACGAGGATATTATTCAATGAAGCTTTTAGCAGAGGACTTCGCATCATGCAGATTGTCACTGGGAAGAAATCAAAAGGCGATGTCTAA

Protein Analysis

1780

Amino Acids

206.91

Weight (kDa)

9.02

Isoelectric Point (pI)

39.16

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FKS1_dom1 PF14288 159 - 271 1.3e-42 1,3-beta-glucan synthase subunit FKS1, domain-1
CALS1 PF25968 688 - 869 1.4e-31 Callose synthase 1 domain
Glucan_synthase PF02364 877 - 1678 1.4e-259 1,3-beta-glucan synthase component
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0014998)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G03550
fragaria_vesca FvH4_6g26200
malus_domestica MD09G1247400.v1.1 MD17G1240300.v1.1
prunus_persica Prupe.3G138400_v2.0.a1
pyrus_communis pycom17g24360
rosa_chinensis RchiOBHm_Chr2g0126481
rosa_laevigata RLG00000018906
rosa_multiflora Rmu_sc0000662.1_g000007
rosa_roxburghii Rroxscaffold_2G00117140
rosa_rugosa Rorug02G0263500
rosa_samantha Rh2AG320100 Rh2BG328800 Rh2CG308500 Rh2DG348100
rosa_wichuraiana Rw2G025950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 3815
Acc16I TGCGCA 1 cut(s) 735
Acc36I ACCTGC 5 cut(s) 1516, 2337, 2569, 2832, 3961
Acc65I GGTACC 1 cut(s) 4677
AccB1I GGYRCC 3 cut(s) 1309, 3334, 4677
AccB7I CCANNNNNTGG 1 cut(s) 568
AccBSI CCGCTC 1 cut(s) 4145
AccI GTMKAC 4 cut(s) 2766, 4506, 4827, 4869
AccII CGCG 4 cut(s) 362, 1103, 1262, 4175
AclI AACGTT 1 cut(s) 267
AclWI GGATC 8 cut(s) 452, 1490, 3649, 4180, 4489, 4679, 4845, 4858
AcoI YGGCCR 5 cut(s) 41, 619, 809, 2060, 3745
AcuI CTGAAG 6 cut(s) 1040, 2262, 2653, 3746, 4003, 5150
AcyI GRCGYC 1 cut(s) 669
AdeI CACNNNGTG 1 cut(s) 4471
AfiI CCNNNNNNNGG 7 cut(s) 35, 568, 1185, 1327, 3727, 4179, 4381
AflII CTTAAG 3 cut(s) 3002, 3142, 4634
AhdI GACNNNNNGTC 1 cut(s) 3028
AjiI CACGTC 1 cut(s) 4406
AjnI CCWGG 7 cut(s) 1320, 1362, 2036, 2103, 3430, 3570, 5236
AleI CACNNNNGTG 1 cut(s) 3658
AloI GAACNNNNNNTCC 2 cut(s) 3957, 3989
Alw21I GWGCWC 5 cut(s) 582, 3058, 4351, 4425, 4911
AlwI GGATC 8 cut(s) 452, 1490, 3649, 4180, 4489, 4679, 4845, 4858
AlwNI CAGNNNCTG 1 cut(s) 3771
Ama87I CYCGRG 5 cut(s) 137, 2502, 3998, 4256, 5024
ApeKI GCWGC 8 cut(s) 155, 158, 518, 1003, 1175, 1555, 2023, 2332
ArsI GACNNNNNNTTYG 4 cut(s) 3521, 3553, 5174, 5206
AseI ATTAAT 1 cut(s) 2280
Asp700I GAANNNNTTC 2 cut(s) 1385, 2855
Asp718I GGTACC 1 cut(s) 4677
AspLEI GCGC 3 cut(s) 736, 882, 4177
AspS9I GGNCC 9 cut(s) 1251, 1299, 2326, 3434, 4341, 4383, 4597, 4741, 4792
AsuC2I CCSGG 3 cut(s) 2996, 3841, 4759
AsuII TTCGAA 1 cut(s) 4294
AsuNHI GCTAGC 1 cut(s) 931
AvaI CYCGRG 5 cut(s) 137, 2502, 3998, 4256, 5024
AvaII GGWCC 6 cut(s) 1251, 2326, 3434, 4341, 4741, 4792
AxyI CCTNAGG 4 cut(s) 1812, 2706, 2927, 3267
BaeGI GKGCMC 2 cut(s) 1314, 4005
BalI TGGCCA 1 cut(s) 3747
BamHI GGATCC 1 cut(s) 4850
BanI GGYRCC 3 cut(s) 1309, 3334, 4677
BanII GRGCYC 3 cut(s) 582, 3001, 4351
BarI GAAGNNNNNNTAC 2 cut(s) 1998, 2030
BauI CACGAG 1 cut(s) 3881
BbsI GAAGAC 5 cut(s) 2257, 2471, 2571, 4312, 4662
Bbv12I GWGCWC 5 cut(s) 582, 3058, 4351, 4425, 4911
BbvCI CCTCAGC 1 cut(s) 1760
BbvI GCAGC 8 cut(s) 142, 145, 505, 1015, 1162, 1542, 2010, 2319
BccI CCATC 8 cut(s) 126, 1657, 2716, 2795, 3104, 4066, 4487, 4624
BceAI ACGGC 8 cut(s) 28, 56, 64, 178, 1876, 1885, 2047, 2669
BcgI CGANNNNNNTGC 2 cut(s) 128, 162
BciT130I CCWGG 7 cut(s) 1322, 1364, 2038, 2105, 3432, 3572, 5238
BciVI GTATCC 1 cut(s) 5190
BclI TGATCA 1 cut(s) 1726
BcnI CCSGG 3 cut(s) 2996, 3841, 4759
BfmI CTRYAG 7 cut(s) 1523, 2181, 2354, 2417, 2825, 2944, 4047
BfrI CTTAAG 3 cut(s) 3002, 3142, 4634
BfuAI ACCTGC 5 cut(s) 1516, 2337, 2569, 2832, 3961
BfuI GTATCC 1 cut(s) 5190
BglII AGATCT 1 cut(s) 3234
BmcAI AGTACT 3 cut(s) 773, 1469, 4943
Bme18I GGWCC 6 cut(s) 1251, 2326, 3434, 4341, 4741, 4792
BmeRI GACNNNNNGTC 1 cut(s) 3028
BmeT110I CYCGRG 5 cut(s) 137, 2502, 3998, 4256, 5024
BmgBI CACGTC 1 cut(s) 4406
BmgT120I GGNCC 9 cut(s) 1251, 1299, 2326, 3434, 4341, 4383, 4597, 4741, 4792
BmrI ACTGGG 2 cut(s) 3104, 5325
BmtI GCTAGC 1 cut(s) 935
BmuI ACTGGG 2 cut(s) 3104, 5325
BoxI GACNNNNGTC 1 cut(s) 183
BpiI GAAGAC 5 cut(s) 2257, 2471, 2571, 4312, 4662
BplI GAGNNNNNCTC 2 cut(s) 465, 497
BpmI CTGGAG 2 cut(s) 2039, 3554
Bpu10I CCTNAGC 6 cut(s) 1760, 1766, 1880, 3057, 3675, 3945
Bpu14I TTCGAA 1 cut(s) 4294
BpuEI CTTGAG 3 cut(s) 1934, 3536, 3799
BpuMI CCSGG 3 cut(s) 2996, 3841, 4759
Bsa29I ATCGAT 1 cut(s) 5049
BsaAI YACGTR 1 cut(s) 2966
BsaBI GATNNNNATC 2 cut(s) 1667, 4889
BsaHI GRCGYC 1 cut(s) 669
BsaI GGTCTC 7 cut(s) 171, 1127, 1364, 2499, 2916, 3249, 4257
BsaJI CCNNGG 7 cut(s) 138, 360, 1346, 2037, 3493, 4375, 4681
BsaWI WCCGGW 2 cut(s) 35, 4797
BsaXI ACNNNNNCTCC 2 cut(s) 3957, 3987
Bsc4I CCNNNNNNNGG 7 cut(s) 35, 568, 1185, 1327, 3727, 4179, 4381
Bse118I RCCGGY 4 cut(s) 617, 665, 2574, 3993
Bse21I CCTNAGG 4 cut(s) 1812, 2706, 2927, 3267
Bse3DI GCAATG 3 cut(s) 2086, 2566, 3486
Bse8I GATNNNNATC 2 cut(s) 1667, 4889
BseBI CCWGG 7 cut(s) 1322, 1364, 2038, 2105, 3432, 3572, 5238
BseCI ATCGAT 1 cut(s) 5049
BseDI CCNNGG 7 cut(s) 138, 360, 1346, 2037, 3493, 4375, 4681
BseJI GATNNNNATC 2 cut(s) 1667, 4889
BseLI CCNNNNNNNGG 7 cut(s) 35, 568, 1185, 1327, 3727, 4179, 4381
BseMI GCAATG 3 cut(s) 2086, 2566, 3486
BseRI GAGGAG 6 cut(s) 89, 98, 215, 2490, 3363, 4274
BseSI GKGCMC 2 cut(s) 1314, 4005
BseX3I CGGCCG 1 cut(s) 41
BseXI GCAGC 8 cut(s) 142, 145, 505, 1015, 1162, 1542, 2010, 2319
BseYI CCCAGC 4 cut(s) 2509, 3445, 4713, 5088
BsgI GTGCAG 1 cut(s) 3835
Bsh1236I CGCG 4 cut(s) 362, 1103, 1262, 4175
Bsh1285I CGRYCG 3 cut(s) 44, 3133, 4363
BshNI GGYRCC 3 cut(s) 1309, 3334, 4677
BshVI ATCGAT 1 cut(s) 5049
BsiEI CGRYCG 3 cut(s) 44, 3133, 4363
BsiHKAI GWGCWC 5 cut(s) 582, 3058, 4351, 4425, 4911
BsiHKCI CYCGRG 5 cut(s) 137, 2502, 3998, 4256, 5024
BslFI GGGAC 9 cut(s) 8, 1760, 1767, 2615, 2627, 3208, 3918, 4119, 4354
BslI CCNNNNNNNGG 7 cut(s) 35, 568, 1185, 1327, 3727, 4179, 4381
BsmBI CGTCTC 3 cut(s) 326, 463, 2644
BsmFI GGGAC 9 cut(s) 8, 1760, 1767, 2615, 2627, 3208, 3918, 4119, 4354
BsmI GAATGC 8 cut(s) 1018, 1161, 1834, 1863, 3741, 4302, 5072, 5158
Bso31I GGTCTC 7 cut(s) 171, 1127, 1364, 2499, 2916, 3249, 4257
BsoBI CYCGRG 5 cut(s) 137, 2502, 3998, 4256, 5024
Bsp119I TTCGAA 1 cut(s) 4294
Bsp1286I GDGCHC 8 cut(s) 582, 1314, 3001, 3058, 4005, 4351, 4425, 4911
Bsp19I CCATGG 2 cut(s) 1346, 4375
BspDI ATCGAT 1 cut(s) 5049
BspFNI CGCG 4 cut(s) 362, 1103, 1262, 4175
BspHI TCATGA 2 cut(s) 2685, 4662
BspMAI CTGCAG 4 cut(s) 1527, 2358, 2421, 2829
BspMI ACCTGC 5 cut(s) 1516, 2337, 2569, 2832, 3961
BspOI GCTAGC 1 cut(s) 935
BspPI GGATC 8 cut(s) 452, 1490, 3649, 4180, 4489, 4679, 4845, 4858
BspQI GCTCTTC 1 cut(s) 4916
BspT104I TTCGAA 1 cut(s) 4294
BspT107I GGYRCC 3 cut(s) 1309, 3334, 4677
BspTI CTTAAG 3 cut(s) 3002, 3142, 4634
BspTNI GGTCTC 7 cut(s) 171, 1127, 1364, 2499, 2916, 3249, 4257
BsrBI CCGCTC 1 cut(s) 4145
BsrDI GCAATG 3 cut(s) 2086, 2566, 3486
BsrFI RCCGGY 4 cut(s) 617, 665, 2574, 3993
BssAI RCCGGY 4 cut(s) 617, 665, 2574, 3993
BssECI CCNNGG 7 cut(s) 138, 360, 1346, 2037, 3493, 4375, 4681
BssNAI GTATAC 2 cut(s) 2767, 4828
BssNI GRCGYC 1 cut(s) 669
BssSI CACGAG 1 cut(s) 3881
BssT1I CCWWGG 3 cut(s) 1346, 4375, 4681
Bst1107I GTATAC 2 cut(s) 2767, 4828
Bst2BI CACGAG 1 cut(s) 3881
Bst2UI CCWGG 7 cut(s) 1322, 1364, 2038, 2105, 3432, 3572, 5238
Bst6I CTCTTC 6 cut(s) 66, 1226, 1362, 1977, 3340, 4916
BstACI GRCGYC 1 cut(s) 669
BstAFI CTTAAG 3 cut(s) 3002, 3142, 4634
BstAPI GCANNNNNTGC 2 cut(s) 292, 1093
BstBAI YACGTR 1 cut(s) 2966
BstBI TTCGAA 1 cut(s) 4294
BstDSI CCRYGG 4 cut(s) 360, 1346, 3493, 4375
BstFNI CGCG 4 cut(s) 362, 1103, 1262, 4175
BstHHI GCGC 3 cut(s) 736, 882, 4177
BstMCI CGRYCG 3 cut(s) 44, 3133, 4363
BstNI CCWGG 7 cut(s) 1322, 1364, 2038, 2105, 3432, 3572, 5238
BstNSI RCATGY 2 cut(s) 2695, 5179
BstPAI GACNNNNGTC 1 cut(s) 183
BstSFI CTRYAG 7 cut(s) 1523, 2181, 2354, 2417, 2825, 2944, 4047
BstSLI GKGCMC 2 cut(s) 1314, 4005
BstUI CGCG 4 cut(s) 362, 1103, 1262, 4175
BstV1I GCAGC 8 cut(s) 142, 145, 505, 1015, 1162, 1542, 2010, 2319
BstV2I GAAGAC 5 cut(s) 2257, 2471, 2571, 4312, 4662
BstX2I RGATCY 5 cut(s) 444, 1482, 3234, 4671, 4850
BstXI CCANNNNNNTGG 3 cut(s) 3191, 3590, 5088
BstYI RGATCY 5 cut(s) 444, 1482, 3234, 4671, 4850
BstZ17I GTATAC 2 cut(s) 2767, 4828
BstZI CGGCCG 1 cut(s) 41
Bsu15I ATCGAT 1 cut(s) 5049
Bsu36I CCTNAGG 4 cut(s) 1812, 2706, 2927, 3267
BsuI GTATCC 1 cut(s) 5190
BsuTUI ATCGAT 1 cut(s) 5049
BtgI CCRYGG 4 cut(s) 360, 1346, 3493, 4375
BtrI CACGTC 1 cut(s) 4406
BtsI GCAGTG 3 cut(s) 1253, 2351, 4224
BveI ACCTGC 5 cut(s) 1516, 2337, 2569, 2832, 3961
CaiI CAGNNNCTG 1 cut(s) 3771
CciI TCATGA 2 cut(s) 2685, 4662
CfoI GCGC 3 cut(s) 736, 882, 4177
Cfr10I RCCGGY 4 cut(s) 617, 665, 2574, 3993
Cfr13I GGNCC 9 cut(s) 1251, 1299, 2326, 3434, 4341, 4383, 4597, 4741, 4792
Cfr42I CCGCGG 1 cut(s) 363
ClaI ATCGAT 1 cut(s) 5049
CseI GACGC 6 cut(s) 308, 658, 1109, 2132, 2617, 3018
CsiI ACCWGGT 1 cut(s) 3430
CspCI CAANNNNNGTGG 2 cut(s) 5105, 5140
DraIII CACNNNGTG 1 cut(s) 4471
DriI GACNNNNNGTC 1 cut(s) 3028
EaeI YGGCCR 5 cut(s) 41, 619, 809, 2060, 3745
EagI CGGCCG 1 cut(s) 41
Eam1104I CTCTTC 6 cut(s) 66, 1226, 1362, 1977, 3340, 4916
Eam1105I GACNNNNNGTC 1 cut(s) 3028
EarI CTCTTC 6 cut(s) 66, 1226, 1362, 1977, 3340, 4916
EciI GGCGGA 4 cut(s) 68, 180, 318, 2671
Ecl136II GAGCTC 2 cut(s) 580, 4349
EclXI CGGCCG 1 cut(s) 41
Eco130I CCWWGG 3 cut(s) 1346, 4375, 4681
Eco24I GRGCYC 3 cut(s) 582, 3001, 4351
Eco31I GGTCTC 7 cut(s) 171, 1127, 1364, 2499, 2916, 3249, 4257
Eco32I GATATC 4 cut(s) 763, 1669, 3930, 5053
Eco47I GGWCC 6 cut(s) 1251, 2326, 3434, 4341, 4741, 4792
Eco52I CGGCCG 1 cut(s) 41
Eco53kI GAGCTC 2 cut(s) 580, 4349
Eco57I CTGAAG 6 cut(s) 1040, 2262, 2653, 3746, 4003, 5150
Eco81I CCTNAGG 4 cut(s) 1812, 2706, 2927, 3267
Eco88I CYCGRG 5 cut(s) 137, 2502, 3998, 4256, 5024
EcoICRI GAGCTC 2 cut(s) 580, 4349
EcoO109I RGGNCCY 1 cut(s) 1299
EcoRI GAATTC 2 cut(s) 2032, 5094
EcoRII CCWGG 7 cut(s) 1320, 1362, 2036, 2103, 3430, 3570, 5236
EcoRV GATATC 4 cut(s) 763, 1669, 3930, 5053
EcoT14I CCWWGG 3 cut(s) 1346, 4375, 4681
EcoT22I ATGCAT 2 cut(s) 2874, 3741
EcoT38I GRGCYC 3 cut(s) 582, 3001, 4351
ErhI CCWWGG 3 cut(s) 1346, 4375, 4681
Esp3I CGTCTC 3 cut(s) 326, 463, 2644
FaqI GGGAC 9 cut(s) 8, 1760, 1767, 2615, 2627, 3208, 3918, 4119, 4354
FauI CCCGC 4 cut(s) 33, 2394, 3334, 4121
FauNDI CATATG 4 cut(s) 288, 2194, 3217, 3322
FbaI TGATCA 1 cut(s) 1726
FblI GTMKAC 4 cut(s) 2766, 4506, 4827, 4869
FriOI GRGCYC 3 cut(s) 582, 3001, 4351
FspI TGCGCA 1 cut(s) 735
GlaI GCGC 3 cut(s) 735, 881, 4176
GsaI CCCAGC 4 cut(s) 2513, 3449, 4717, 5092
GsuI CTGGAG 2 cut(s) 2039, 3554
HgaI GACGC 6 cut(s) 308, 658, 1109, 2132, 2617, 3018
HhaI GCGC 3 cut(s) 736, 882, 4177
Hin1I GRCGYC 1 cut(s) 669
Hin6I GCGC 3 cut(s) 734, 880, 4175
HinP1I GCGC 3 cut(s) 734, 880, 4175
HincII GTYRAC 2 cut(s) 100, 2236
HindII GTYRAC 2 cut(s) 100, 2236
HindIII AAGCTT 2 cut(s) 1420, 5277
HpaI GTTAAC 1 cut(s) 100
Hpy99I CGWCG 7 cut(s) 189, 375, 384, 674, 761, 994, 1267
HpyCH4IV ACGT 6 cut(s) 267, 887, 2965, 3854, 3870, 4405
HpySE526I ACGT 6 cut(s) 267, 887, 2965, 3854, 3870, 4405
Hsp92I GRCGYC 1 cut(s) 669
HspAI GCGC 3 cut(s) 734, 880, 4175
KpnI GGTACC 1 cut(s) 4681
Ksp22I TGATCA 1 cut(s) 1726
KspAI GTTAAC 1 cut(s) 100
KspI CCGCGG 1 cut(s) 363
LguI GCTCTTC 1 cut(s) 4916
LmnI GCTCC 7 cut(s) 76, 877, 2020, 2787, 3061, 3573, 3625
Lsp1109I GCAGC 8 cut(s) 142, 145, 505, 1015, 1162, 1542, 2010, 2319
MabI ACCWGGT 1 cut(s) 3430
MaeII ACGT 6 cut(s) 267, 887, 2965, 3854, 3870, 4405
MbiI CCGCTC 1 cut(s) 4145
MfeI CAATTG 1 cut(s) 1375
MflI RGATCY 5 cut(s) 444, 1482, 3234, 4671, 4850
MhlI GDGCHC 8 cut(s) 582, 1314, 3001, 3058, 4005, 4351, 4425, 4911
MlsI TGGCCA 1 cut(s) 3747
MluNI TGGCCA 1 cut(s) 3747
MlyI GAGTC 9 cut(s) 486, 1074, 1925, 2609, 2734, 3017, 3790, 4529, 5107
MmeI TCCRAC 6 cut(s) 43, 154, 362, 469, 3375, 3895
Mox20I TGGCCA 1 cut(s) 3747
Mph1103I ATGCAT 2 cut(s) 2874, 3741
MroXI GAANNNNTTC 2 cut(s) 1385, 2855
MscI TGGCCA 1 cut(s) 3747
Msp20I TGGCCA 1 cut(s) 3747
MspA1I CMGCKG 7 cut(s) 155, 362, 1006, 1759, 4128, 4316, 4569
MspCI CTTAAG 3 cut(s) 3002, 3142, 4634
MunI CAATTG 1 cut(s) 1375
Mva1269I GAATGC 8 cut(s) 1018, 1161, 1834, 1863, 3741, 4302, 5072, 5158
MvaI CCWGG 7 cut(s) 1322, 1364, 2038, 2105, 3432, 3572, 5238
MvnI CGCG 4 cut(s) 362, 1103, 1262, 4175
NciI CCSGG 3 cut(s) 2996, 3841, 4759
NcoI CCATGG 2 cut(s) 1346, 4375
NdeI CATATG 4 cut(s) 288, 2194, 3217, 3322
NheI GCTAGC 1 cut(s) 931
NmeAIII GCCGAG 2 cut(s) 4007, 4925
NmuCI GTSAC 7 cut(s) 2044, 3651, 3691, 3871, 4463, 4934, 5311
NsbI TGCGCA 1 cut(s) 735
NsiI ATGCAT 2 cut(s) 2874, 3741
NspI RCATGY 2 cut(s) 2695, 5179
NspV TTCGAA 1 cut(s) 4294
OliI CACNNNNGTG 1 cut(s) 3658
PaeR7I CTCGAG 3 cut(s) 2502, 4256, 5024
PagI TCATGA 2 cut(s) 2685, 4662
PciSI GCTCTTC 1 cut(s) 4916
PcsI WCGNNNNNNNCGW 6 cut(s) 225, 277, 376, 2971, 3656, 4520
PctI GAATGC 8 cut(s) 1018, 1161, 1834, 1863, 3741, 4302, 5072, 5158
PdmI GAANNNNTTC 2 cut(s) 1385, 2855
PflMI CCANNNNNTGG 1 cut(s) 568
PfoI TCCNGGA 2 cut(s) 1362, 3570
PleI GAGTC 9 cut(s) 486, 1074, 1924, 2609, 2734, 3017, 3789, 4529, 5107
PpsI GAGTC 9 cut(s) 486, 1074, 1924, 2609, 2734, 3017, 3789, 4529, 5107
Ppu21I YACGTR 1 cut(s) 2966
PshAI GACNNNNGTC 1 cut(s) 183
PshBI ATTAAT 1 cut(s) 2280
PsiI TTATAA 1 cut(s) 3815
Psp124BI GAGCTC 2 cut(s) 582, 4351
Psp1406I AACGTT 1 cut(s) 267
Psp6I CCWGG 7 cut(s) 1320, 1362, 2036, 2103, 3430, 3570, 5236
PspFI CCCAGC 4 cut(s) 2509, 3445, 4713, 5088
PspGI CCWGG 7 cut(s) 1320, 1362, 2036, 2103, 3430, 3570, 5236
PspPI GGNCC 9 cut(s) 1251, 1299, 2326, 3434, 4341, 4383, 4597, 4741, 4792
PspXI VCTCGAGB 1 cut(s) 5024
PstI CTGCAG 4 cut(s) 1527, 2358, 2421, 2829
PstNI CAGNNNCTG 1 cut(s) 3771
PsuI RGATCY 5 cut(s) 444, 1482, 3234, 4671, 4850
PvuII CAGCTG 4 cut(s) 1006, 1759, 4316, 4569
SacI GAGCTC 2 cut(s) 582, 4351
SacII CCGCGG 1 cut(s) 363
SapI GCTCTTC 1 cut(s) 4916
Sau96I GGNCC 9 cut(s) 1251, 1299, 2326, 3434, 4341, 4383, 4597, 4741, 4792
SbfI CCTGCAGG 1 cut(s) 1527
ScaI AGTACT 3 cut(s) 773, 1469, 4943
SchI GAGTC 9 cut(s) 486, 1074, 1925, 2609, 2734, 3017, 3790, 4529, 5107
SdaI CCTGCAGG 1 cut(s) 1527
SduI GDGCHC 8 cut(s) 582, 1314, 3001, 3058, 4005, 4351, 4425, 4911
SexAI ACCWGGT 1 cut(s) 3430
SfcI CTRYAG 7 cut(s) 1523, 2181, 2354, 2417, 2825, 2944, 4047
Sfr274I CTCGAG 3 cut(s) 2502, 4256, 5024
Sfr303I CCGCGG 1 cut(s) 363
SfuI TTCGAA 1 cut(s) 4294
SgrBI CCGCGG 1 cut(s) 363
SinI GGWCC 6 cut(s) 1251, 2326, 3434, 4341, 4741, 4792
SlaI CTCGAG 3 cut(s) 2502, 4256, 5024
SmlI CTYRAG 9 cut(s) 1913, 2502, 3002, 3142, 3551, 3778, 4256, 4634, 5024
SmoI CTYRAG 9 cut(s) 1913, 2502, 3002, 3142, 3551, 3778, 4256, 4634, 5024
Sse8387I CCTGCAGG 1 cut(s) 1527
SspI AATATT 3 cut(s) 343, 1386, 3414
SstI GAGCTC 2 cut(s) 582, 4351
StyI CCWWGG 3 cut(s) 1346, 4375, 4681
TaiI ACGT 6 cut(s) 270, 890, 2968, 3857, 3873, 4408
TaqII GACCGA 3 cut(s) 3147, 4205, 4349
TatI WGTACW 6 cut(s) 771, 1467, 2985, 3576, 3885, 4941
TseFI GTSAC 7 cut(s) 2044, 3651, 3691, 3871, 4463, 4934, 5311
TseI GCWGC 8 cut(s) 155, 158, 518, 1003, 1175, 1555, 2023, 2332
Tsp45I GTSAC 7 cut(s) 2044, 3651, 3691, 3871, 4463, 4934, 5311
TspGWI ACGGA 9 cut(s) 119, 2881, 3151, 3302, 3358, 3407, 3978, 4175, 4863
Van91I CCANNNNNTGG 1 cut(s) 568
Vha464I CTTAAG 3 cut(s) 3002, 3142, 4634
VpaK11BI GGWCC 6 cut(s) 1251, 2326, 3434, 4341, 4741, 4792
VspI ATTAAT 1 cut(s) 2280
XbaI TCTAGA 1 cut(s) 2641
XceI RCATGY 2 cut(s) 2695, 5179
XcmI CCANNNNNNNNNTGG 1 cut(s) 2034
XhoI CTCGAG 3 cut(s) 2502, 4256, 5024
XmiI GTMKAC 4 cut(s) 2766, 4506, 4827, 4869
XmnI GAANNNNTTC 2 cut(s) 1385, 2855
ZrmI AGTACT 3 cut(s) 773, 1469, 4943
Zsp2I ATGCAT 2 cut(s) 2874, 3741
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.