UBA-like domain (DUF1421)
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G28300 AT4G28300 |
| fragaria_vesca | FvH4_6g26191 FvH4_6g26191 |
| malus_domestica | MD09G1247500.v1.1 MD17G1240400.v1.1 |
| prunus_persica | Prupe.3G137800_v2.0.a1 Prupe.3G137800_v2.0.a1 Prupe.3G137800_v2.0.a1 Prupe.6G316300_v2.0.a1 |
| pyrus_communis | pycom09g16490 pycom17g24370 |
| rosa_chinensis | RchiOBHm_Chr2g0126471 |
| rosa_laevigata | RLG00000018905 |
| rosa_roxburghii | Rroxscaffold_2G00117150 |
| rosa_rugosa | Rorug02G0263500 |
| rosa_samantha | Rh2AG320000 Rh2BG328700 Rh2CG308400 Rh2DG348000 |
| rosa_wichuraiana | Rw2G025940 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 348 |
| Acc36I | ACCTGC | 2 cut(s) | 310, 348 |
| Acc65I | GGTACC | 1 cut(s) | 164 |
| AccB1I | GGYRCC | 1 cut(s) | 164 |
| AciI | CCGC | 1 cut(s) | 331 |
| AfaI | GTAC | 2 cut(s) | 166, 392 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 387 |
| AflIII | ACRYGT | 1 cut(s) | 114 |
| AgsI | TTSAA | 3 cut(s) | 242, 266, 352 |
| AleI | CACNNNNGTG | 1 cut(s) | 173 |
| AluBI | AGCT | 2 cut(s) | 28, 318 |
| AluI | AGCT | 2 cut(s) | 28, 318 |
| Alw21I | GWGCWC | 1 cut(s) | 122 |
| Alw26I | GTCTC | 1 cut(s) | 29 |
| Ama87I | CYCGRG | 1 cut(s) | 290 |
| AoxI | GGCC | 2 cut(s) | 48, 337 |
| ApeKI | GCWGC | 1 cut(s) | 315 |
| Asp718I | GGTACC | 1 cut(s) | 164 |
| AsuHPI | GGTGA | 2 cut(s) | 223, 377 |
| AvaI | CYCGRG | 1 cut(s) | 290 |
| BanI | GGYRCC | 1 cut(s) | 164 |
| Bbv12I | GWGCWC | 1 cut(s) | 122 |
| BbvI | GCAGC | 1 cut(s) | 327 |
| BclI | TGATCA | 1 cut(s) | 213 |
| BcoDI | GTCTC | 1 cut(s) | 29 |
| BfuAI | ACCTGC | 2 cut(s) | 310, 348 |
| BisI | GCNGC | 1 cut(s) | 316 |
| BlsI | GCNGC | 1 cut(s) | 317 |
| BmeT110I | CYCGRG | 1 cut(s) | 290 |
| BmiI | GGNNCC | 1 cut(s) | 166 |
| BmsI | GCATC | 2 cut(s) | 394, 430 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 104, 134 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 387 |
| Bse1I | ACTGG | 1 cut(s) | 43 |
| Bse3DI | GCAATG | 1 cut(s) | 444 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 387 |
| BseMI | GCAATG | 1 cut(s) | 444 |
| BseNI | ACTGG | 1 cut(s) | 43 |
| BseXI | GCAGC | 1 cut(s) | 327 |
| BsgI | GTGCAG | 3 cut(s) | 334, 376, 450 |
| BshFI | GGCC | 2 cut(s) | 50, 339 |
| BshNI | GGYRCC | 1 cut(s) | 164 |
| BsiHKAI | GWGCWC | 1 cut(s) | 122 |
| BsiHKCI | CYCGRG | 1 cut(s) | 290 |
| BslFI | GGGAC | 1 cut(s) | 205 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 387 |
| BsmAI | GTCTC | 1 cut(s) | 29 |
| BsmFI | GGGAC | 1 cut(s) | 205 |
| BsnI | GGCC | 2 cut(s) | 50, 339 |
| BsoBI | CYCGRG | 1 cut(s) | 290 |
| Bsp1286I | GDGCHC | 1 cut(s) | 122 |
| Bsp143I | GATC | 1 cut(s) | 213 |
| BspACI | CCGC | 1 cut(s) | 331 |
| BspANI | GGCC | 2 cut(s) | 50, 339 |
| BspLI | GGNNCC | 1 cut(s) | 166 |
| BspMI | ACCTGC | 2 cut(s) | 310, 348 |
| BspT107I | GGYRCC | 1 cut(s) | 164 |
| BsrDI | GCAATG | 1 cut(s) | 444 |
| BsrI | ACTGG | 1 cut(s) | 43 |
| BssMI | GATC | 1 cut(s) | 213 |
| Bst6I | CTCTTC | 1 cut(s) | 14 |
| BstKTI | GATC | 1 cut(s) | 216 |
| BstMAI | GTCTC | 1 cut(s) | 29 |
| BstMBI | GATC | 1 cut(s) | 213 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 56, 126 |
| BstNSI | RCATGY | 2 cut(s) | 118, 415 |
| BstV1I | GCAGC | 1 cut(s) | 327 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 175 |
| BsuRI | GGCC | 2 cut(s) | 50, 339 |
| BveI | ACCTGC | 2 cut(s) | 310, 348 |
| Csp6I | GTAC | 2 cut(s) | 165, 391 |
| CviAII | CATG | 3 cut(s) | 115, 224, 412 |
| CviJI | RGCY | 5 cut(s) | 28, 50, 318, 339, 473 |
| CviKI_1 | RGCY | 5 cut(s) | 28, 50, 318, 339, 473 |
| CviQI | GTAC | 2 cut(s) | 165, 391 |
| DpnI | GATC | 1 cut(s) | 215 |
| DpnII | GATC | 1 cut(s) | 213 |
| Eam1104I | CTCTTC | 1 cut(s) | 14 |
| EarI | CTCTTC | 1 cut(s) | 14 |
| Eco147I | AGGCCT | 1 cut(s) | 50 |
| Eco88I | CYCGRG | 1 cut(s) | 290 |
| FaeI | CATG | 3 cut(s) | 118, 227, 415 |
| FaiI | YATR | 5 cut(s) | 116, 225, 405, 413, 493 |
| FaqI | GGGAC | 1 cut(s) | 205 |
| FatI | CATG | 3 cut(s) | 114, 223, 411 |
| FauI | CCCGC | 1 cut(s) | 324 |
| FbaI | TGATCA | 1 cut(s) | 213 |
| Fnu4HI | GCNGC | 1 cut(s) | 316 |
| Fsp4HI | GCNGC | 1 cut(s) | 316 |
| GluI | GCNGC | 1 cut(s) | 316 |
| HaeIII | GGCC | 2 cut(s) | 50, 339 |
| Hin1II | CATG | 3 cut(s) | 118, 227, 415 |
| HindIII | AAGCTT | 1 cut(s) | 26 |
| HinfI | GANTC | 2 cut(s) | 11, 256 |
| HphI | GGTGA | 2 cut(s) | 223, 377 |
| Hpy188I | TCNGA | 1 cut(s) | 283 |
| HpyAV | CCTTC | 3 cut(s) | 188, 263, 445 |
| HpyCH4V | TGCA | 6 cut(s) | 305, 315, 357, 385, 411, 431 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 56, 126 |
| Hsp92II | CATG | 3 cut(s) | 118, 227, 415 |
| KpnI | GGTACC | 1 cut(s) | 168 |
| Ksp22I | TGATCA | 1 cut(s) | 213 |
| Kzo9I | GATC | 1 cut(s) | 213 |
| LmnI | GCTCC | 4 cut(s) | 4, 64, 125, 383 |
| LpnPI | CCDG | 6 cut(s) | 24, 315, 343, 395, 417, 474 |
| Lsp1109I | GCAGC | 1 cut(s) | 327 |
| LweI | GCATC | 2 cut(s) | 394, 430 |
| MalI | GATC | 1 cut(s) | 215 |
| MboI | GATC | 1 cut(s) | 213 |
| MboII | GAAGA | 3 cut(s) | 31, 254, 278 |
| MhlI | GDGCHC | 1 cut(s) | 122 |
| MluCI | AATT | 2 cut(s) | 79, 480 |
| MlyI | GAGTC | 1 cut(s) | 265 |
| MmeI | TCCRAC | 1 cut(s) | 420 |
| MnlI | CCTC | 4 cut(s) | 40, 61, 154, 350 |
| MslI | CAYNNNNRTG | 1 cut(s) | 173 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 56, 126 |
| NdeII | GATC | 1 cut(s) | 213 |
| NlaIII | CATG | 3 cut(s) | 118, 227, 415 |
| NlaIV | GGNNCC | 1 cut(s) | 166 |
| NspI | RCATGY | 2 cut(s) | 118, 415 |
| OliI | CACNNNNGTG | 1 cut(s) | 173 |
| PaqCI | CACCTGC | 1 cut(s) | 348 |
| PceI | AGGCCT | 1 cut(s) | 50 |
| PciI | ACATGT | 1 cut(s) | 114 |
| PfeI | GAWTC | 1 cut(s) | 11 |
| PflFI | GACNNNGTC | 1 cut(s) | 255 |
| PkrI | GCNGC | 1 cut(s) | 317 |
| PleI | GAGTC | 1 cut(s) | 264 |
| PpsI | GAGTC | 1 cut(s) | 264 |
| PscI | ACATGT | 1 cut(s) | 114 |
| PspN4I | GGNNCC | 1 cut(s) | 166 |
| PsyI | GACNNNGTC | 1 cut(s) | 255 |
| RsaI | GTAC | 2 cut(s) | 166, 392 |
| RsaNI | GTAC | 2 cut(s) | 165, 391 |
| RseI | CAYNNNNRTG | 1 cut(s) | 173 |
| SatI | GCNGC | 1 cut(s) | 316 |
| Sau3AI | GATC | 1 cut(s) | 213 |
| SchI | GAGTC | 1 cut(s) | 265 |
| SduI | GDGCHC | 1 cut(s) | 122 |
| SetI | ASST | 7 cut(s) | 30, 189, 199, 304, 314, 320, 362 |
| SfaNI | GCATC | 2 cut(s) | 394, 430 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 173 |
| Sse9I | AATT | 2 cut(s) | 79, 480 |
| SseBI | AGGCCT | 1 cut(s) | 50 |
| SsiI | CCGC | 1 cut(s) | 331 |
| StuI | AGGCCT | 1 cut(s) | 50 |
| TasI | AATT | 2 cut(s) | 79, 480 |
| TfiI | GAWTC | 1 cut(s) | 11 |
| TseI | GCWGC | 1 cut(s) | 315 |
| Tth111I | GACNNNGTC | 1 cut(s) | 255 |
| XceI | RCATGY | 2 cut(s) | 118, 415 |