UBA-like domain (DUF1421)
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G28300 AT4G28300 |
| fragaria_vesca | FvH4_6g26191 FvH4_6g26191 |
| malus_domestica | MD09G1247500.v1.1 MD17G1240400.v1.1 |
| prunus_persica | Prupe.3G137800_v2.0.a1 Prupe.3G137800_v2.0.a1 Prupe.3G137800_v2.0.a1 Prupe.6G316300_v2.0.a1 |
| pyrus_communis | pycom09g16490 pycom17g24370 |
| rosa_chinensis | RchiOBHm_Chr2g0126471 |
| rosa_laevigata | RLG00000018905 |
| rosa_roxburghii | Rroxscaffold_2G00117150 |
| rosa_rugosa | Rorug02G0263500 |
| rosa_samantha | Rh2AG320000 Rh2BG328700 Rh2CG308400 Rh2DG348000 |
| rosa_wichuraiana | Rw2G025940 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 1 cut(s) | 28 |
| AgsI | TTSAA | 3 cut(s) | 128, 173, 202 |
| AluBI | AGCT | 1 cut(s) | 206 |
| AluI | AGCT | 1 cut(s) | 206 |
| Alw26I | GTCTC | 1 cut(s) | 46 |
| ApeKI | GCWGC | 2 cut(s) | 22, 74 |
| ApoI | RAATTY | 1 cut(s) | 28 |
| ArsI | GACNNNNNNTTYG | 1 cut(s) | 195 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 181 |
| AspLEI | GCGC | 1 cut(s) | 165 |
| BbvI | GCAGC | 2 cut(s) | 34, 61 |
| BcoDI | GTCTC | 1 cut(s) | 46 |
| BfmI | CTRYAG | 1 cut(s) | 79 |
| BisI | GCNGC | 2 cut(s) | 23, 75 |
| BlsI | GCNGC | 2 cut(s) | 24, 76 |
| BpuEI | CTTGAG | 1 cut(s) | 192 |
| BseGI | GGATG | 1 cut(s) | 51 |
| BseXI | GCAGC | 2 cut(s) | 34, 61 |
| BseYI | CCCAGC | 1 cut(s) | 14 |
| BsiSI | CCGG | 1 cut(s) | 89 |
| BsmAI | GTCTC | 1 cut(s) | 46 |
| Bst4CI | ACNGT | 1 cut(s) | 124 |
| Bst6I | CTCTTC | 1 cut(s) | 73 |
| BstC8I | GCNNGC | 2 cut(s) | 20, 86 |
| BstF5I | GGATG | 1 cut(s) | 51 |
| BstHHI | GCGC | 1 cut(s) | 165 |
| BstMAI | GTCTC | 1 cut(s) | 46 |
| BstSFI | CTRYAG | 1 cut(s) | 79 |
| BstV1I | GCAGC | 2 cut(s) | 34, 61 |
| BtsCI | GGATG | 1 cut(s) | 51 |
| Cac8I | GCNNGC | 2 cut(s) | 20, 86 |
| CfoI | GCGC | 1 cut(s) | 165 |
| CviAII | CATG | 2 cut(s) | 136, 160 |
| CviJI | RGCY | 3 cut(s) | 84, 88, 206 |
| CviKI_1 | RGCY | 3 cut(s) | 84, 88, 206 |
| Eam1104I | CTCTTC | 1 cut(s) | 73 |
| EarI | CTCTTC | 1 cut(s) | 73 |
| FaeI | CATG | 2 cut(s) | 139, 163 |
| FaiI | YATR | 5 cut(s) | 36, 81, 137, 147, 161 |
| FatI | CATG | 2 cut(s) | 135, 159 |
| Fnu4HI | GCNGC | 2 cut(s) | 23, 75 |
| FokI | GGATG | 1 cut(s) | 58 |
| Fsp4HI | GCNGC | 2 cut(s) | 23, 75 |
| GlaI | GCGC | 1 cut(s) | 164 |
| GluI | GCNGC | 2 cut(s) | 23, 75 |
| GsaI | CCCAGC | 1 cut(s) | 18 |
| HapII | CCGG | 1 cut(s) | 89 |
| HhaI | GCGC | 1 cut(s) | 165 |
| Hin1II | CATG | 2 cut(s) | 139, 163 |
| Hin6I | GCGC | 1 cut(s) | 163 |
| HinP1I | GCGC | 1 cut(s) | 163 |
| HinfI | GANTC | 2 cut(s) | 95, 198 |
| HpaII | CCGG | 1 cut(s) | 89 |
| Hpy166II | GTNNAC | 1 cut(s) | 185 |
| Hpy188III | TCNNGA | 2 cut(s) | 170, 216 |
| Hpy8I | GTNNAC | 1 cut(s) | 185 |
| HpyAV | CCTTC | 1 cut(s) | 167 |
| HpyCH4III | ACNGT | 1 cut(s) | 124 |
| Hsp92II | CATG | 2 cut(s) | 139, 163 |
| HspAI | GCGC | 1 cut(s) | 163 |
| LpnPI | CCDG | 3 cut(s) | 28, 98, 102 |
| Lsp1109I | GCAGC | 2 cut(s) | 34, 61 |
| MboII | GAAGA | 2 cut(s) | 60, 104 |
| MluCI | AATT | 3 cut(s) | 28, 114, 177 |
| MroXI | GAANNNNTTC | 1 cut(s) | 181 |
| MslI | CAYNNNNRTG | 1 cut(s) | 108 |
| MspI | CCGG | 1 cut(s) | 89 |
| NlaIII | CATG | 2 cut(s) | 139, 163 |
| PdmI | GAANNNNTTC | 1 cut(s) | 181 |
| PfeI | GAWTC | 2 cut(s) | 95, 198 |
| PkrI | GCNGC | 2 cut(s) | 24, 76 |
| PspFI | CCCAGC | 1 cut(s) | 14 |
| RseI | CAYNNNNRTG | 1 cut(s) | 108 |
| SatI | GCNGC | 2 cut(s) | 23, 75 |
| SetI | ASST | 1 cut(s) | 208 |
| SfcI | CTRYAG | 1 cut(s) | 79 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 108 |
| SmlI | CTYRAG | 1 cut(s) | 207 |
| SmoI | CTYRAG | 1 cut(s) | 207 |
| Sse9I | AATT | 3 cut(s) | 28, 114, 177 |
| TaaI | ACNGT | 1 cut(s) | 124 |
| TasI | AATT | 3 cut(s) | 28, 114, 177 |
| TfiI | GAWTC | 2 cut(s) | 95, 198 |
| TseI | GCWGC | 2 cut(s) | 22, 74 |
| TspDTI | ATGAA | 2 cut(s) | 23, 152 |
| XapI | RAATTY | 1 cut(s) | 28 |
| XmnI | GAANNNNTTC | 1 cut(s) | 181 |