Rw2G025940

UBA-like domain (DUF1421)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr2
OG0010117
Physical Location & Seq
Forward (+)
39666412 .. 39669394
2983 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw2G025940.1

Sequence Viewer

Length: 1665 bp
ATGGCGTCCGGATCGTCGGGTCGGCCCAACCCGGGCTCCAAGGGCTTTGATTTCGCGTCTGACGACATTCTCTGCTCCTACGAAGACTTTGGCAGCAACCAGGACTCCTCCAATGGAAGCCACAACGACCCAGCCATGGGAACCAATTCCACCCAGGATTTTCACAAAAGTAGAATGGCAAGATCACCAATGTACACTTCTGCTGCCTATGGCCAGCCTGAAGACTCTCTCAACCAAGAAGTAATTGCTACTGTTGAAAAGAGCATGAAAAAATATGCTGACAATCTCATGCGCTTCCTTGAAGGAATTAGTTCACGGCTGTCACAGTTGGAATTATATTGCTACAATGTTGATAAGTCAATCGGTGAGATGCGTTCTGATTTAAATCGTGATCATGGGGAGGCAGATTCAAAGCTCAAGTCTCTTGAGAAACATCTGCAAGAAGTCCATAGATCTGTCCAGATCCTGAGAGACAAGCAAGAACTTGCTGAGACTCAAAAAGAATTAGCCAAGCTTCAGCTTGCACAGAAAGGTTCTTCTTCATCAACCCATTCACAATCTAATGAGGAAAGAGCTTCACCACCTACCTCAGATGGTCAGAAGACTGACAACACATCTGAACATAACCAGCAATTAGCTCTTGCCTTGCCCCATCAAGTAGCACCACAACAACAGCCGGTGGCACCTCCCCCACAGGCGCCAACTCAGAATGTGACCCAACCACAACAGCCCTATTATTTACCTCAAACTCAGCTATCAAATCCACCACCCCCACAACAGCATCCTCAGAGTCAATATTTGGCTTCGGATCCTCAGTATCGAACCCCGCAACTGCAAGACCCTAGAGTGGCACCACAGCCAACACAATCTCAAGTAAATCAACCACAAGTCCAACCGTTCCCTCAGTATCCACAGCAATTACCACAGCAGTTACCTCAGCAGGTGCAGTATCCACAACAGCCCTCTGTGCAGCCCCAGATGAGGCCCCCATCAACACCTGTGTATCCACCATACCCACCTGGTCAACAGGCGAACCCACCATACCCAACTGGTCAACAGGCGAACCCACCATACCCATCTGGTCAACAGACGAACCCATCTCCTCCAGAGACTCTGCCAAACAGCATGCCAATGCAAGTATCGTATTCGAGTGTTCCTCAACCTGGTTCTGGTCGTTCTGATGCCATACCTTTTGGATATAGCGGAGCTGGTAGAACAATGCCACAGCAGCCTCCACCTCAGCAGATCAAGGGTGCTTTTGGAGCTCAACAAGGTGATGTGTATGCCTCTCCTGGGCCTCACCCTGCACTTCCCCCAGGGAGTACATACATGATGTATGATAGTGAAGGAGGTAGAAATCATTATTCTGCTCAGGTGCCTCGTTACAGTCAAGGTGGATATCCTCCAGCAAGTGCCTCTCAGACTCCACAACCAACAACAACTCCAAATCATATGGTTCGGAATCCGCAATTCATTCGTAACCATCCTTACAATGAGTTGATTGAGAAGTTGGTGAACATGGGTTTTAGGGGTGATCACGTTGCAAGTGTAATCCAGAGGATGGAGGAAAGTGGCCAAACCATCGATTTTAATGCTGTGATTGACAGGTTGAATGTACATTCATCTGGGGCTCCTCCTCCTCCTCAGAGAGGATGGTCAGGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1421

Protein Analysis

554

Amino Acids

60.87

Weight (kDa)

6.1

Isoelectric Point (pI)

66.85

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF1421 PF07223 497 - 541 5.2e-23 UBA-like domain (DUF1421)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 931
Acc36I ACCTGC 1 cut(s) 931
AccB1I GGYRCC 4 cut(s) 682, 697, 850, 1375
AccB7I CCANNNNNTGG 1 cut(s) 1561
AccII CGCG 1 cut(s) 56
AccIII TCCGGA 1 cut(s) 8
AciI CCGC 3 cut(s) 827, 1203, 1466
AclWI GGATC 4 cut(s) 19, 457, 803, 816
AcoI YGGCCR 2 cut(s) 211, 1573
AcuI CTGAAG 2 cut(s) 240, 500
AcyI GRCGYC 2 cut(s) 5, 698
AfaI GTAC 3 cut(s) 194, 1324, 1617
AgsI TTSAA 4 cut(s) 257, 302, 411, 1612
AjnI CCWGG 6 cut(s) 99, 153, 1018, 1162, 1291, 1315
AjuI GAANNNNNNNTTGG 2 cut(s) 181, 213
AluBI AGCT 8 cut(s) 415, 514, 520, 575, 638, 754, 1208, 1265
AluI AGCT 8 cut(s) 415, 514, 520, 575, 638, 754, 1208, 1265
Alw21I GWGCWC 1 cut(s) 1267
Alw26I GTCTC 4 cut(s) 426, 465, 485, 1103
AlwI GGATC 4 cut(s) 19, 457, 803, 816
AlwNI CAGNNNCTG 1 cut(s) 466
Ama87I CYCGRG 1 cut(s) 31
Aor13HI TCCGGA 1 cut(s) 8
AoxI GGCC 5 cut(s) 23, 211, 983, 1295, 1573
ApeKI GCWGC 4 cut(s) 93, 203, 970, 1228
ArsI GACNNNNNNTTYG 2 cut(s) 404, 436
Asp700I GAANNNNTTC 2 cut(s) 145, 310
AspLEI GCGC 2 cut(s) 294, 700
AspS9I GGNCC 3 cut(s) 24, 984, 1295
AsuC2I CCSGG 2 cut(s) 32, 33
AsuHPI GGTGA 7 cut(s) 177, 377, 570, 1286, 1292, 1525, 1544
AvaI CYCGRG 1 cut(s) 31
BaeI ACNNNNGTAYC 2 cut(s) 986, 1019
BalI TGGCCA 2 cut(s) 213, 1575
BamHI GGATCC 1 cut(s) 808
BanI GGYRCC 4 cut(s) 682, 697, 850, 1375
BanII GRGCYC 3 cut(s) 38, 1267, 1633
BbsI GAAGAC 3 cut(s) 90, 228, 608
Bbv12I GWGCWC 1 cut(s) 1267
BbvCI CCTCAGC 2 cut(s) 936, 1239
BbvI GCAGC 4 cut(s) 105, 190, 982, 1240
BccI CCATC 9 cut(s) 587, 660, 997, 1084, 1105, 1491, 1555, 1589, 1647
BceAI ACGGC 1 cut(s) 332
BcgI CGANNNNNNTGC 4 cut(s) 1457, 1491, 1574, 1608
BciT130I CCWGG 6 cut(s) 101, 155, 1020, 1164, 1293, 1317
BciVI GTATCC 3 cut(s) 918, 960, 1014
BclI TGATCA 2 cut(s) 391, 1534
BcnI CCSGG 2 cut(s) 32, 33
BcoDI GTCTC 4 cut(s) 426, 465, 485, 1103
BfaI CTAG 1 cut(s) 843
BfoI RGCGCY 1 cut(s) 701
BfuAI ACCTGC 1 cut(s) 931
BfuI GTATCC 3 cut(s) 918, 960, 1014
BglII AGATCT 1 cut(s) 452
BisI GCNGC 4 cut(s) 94, 204, 971, 1229
BlsI GCNGC 4 cut(s) 95, 205, 972, 1230
Bme1390I CCNGG 8 cut(s) 32, 33, 101, 155, 1020, 1164, 1293, 1317
BmeT110I CYCGRG 1 cut(s) 31
BmgT120I GGNCC 3 cut(s) 24, 984, 1295
BmiI GGNNCC 9 cut(s) 37, 142, 684, 699, 810, 852, 986, 1377, 1632
BmrFI CCNGG 8 cut(s) 32, 33, 101, 155, 1020, 1164, 1293, 1317
BmsI GCATC 3 cut(s) 360, 790, 1171
BpiI GAAGAC 3 cut(s) 90, 228, 608
BplI GAGNNNNNCTC 2 cut(s) 1141, 1173
BpmI CTGGAG 2 cut(s) 1089, 1389
Bpu10I CCTNAGC 3 cut(s) 936, 1239, 1371
BpuEI CTTGAG 3 cut(s) 401, 446, 855
BpuMI CCSGG 2 cut(s) 32, 33
Bsa29I ATCGAT 1 cut(s) 1584
BsaBI GATNNNNATC 1 cut(s) 384
BsaHI GRCGYC 2 cut(s) 5, 698
BsaJI CCNNGG 7 cut(s) 31, 39, 135, 153, 1292, 1315, 1316
BsaWI WCCGGW 1 cut(s) 8
BsaXI ACNNNNNCTCC 6 cut(s) 20, 50, 89, 119, 1426, 1456
Bse118I RCCGGY 1 cut(s) 676
Bse1I ACTGG 1 cut(s) 1054
Bse8I GATNNNNATC 1 cut(s) 384
BseAI TCCGGA 1 cut(s) 8
BseBI CCWGG 6 cut(s) 101, 155, 1020, 1164, 1293, 1317
BseCI ATCGAT 1 cut(s) 1584
BseDI CCNNGG 7 cut(s) 31, 39, 135, 153, 1292, 1315, 1316
BseGI GGATG 4 cut(s) 781, 1483, 1566, 1658
BseJI GATNNNNATC 1 cut(s) 384
BseNI ACTGG 1 cut(s) 1054
BseRI GAGGAG 6 cut(s) 97, 1092, 1623, 1626, 1629, 1632
BseXI GCAGC 4 cut(s) 105, 190, 982, 1240
BseYI CCCAGC 1 cut(s) 130
BsgI GTGCAG 3 cut(s) 965, 989, 1290
Bsh1236I CGCG 1 cut(s) 56
BshFI GGCC 5 cut(s) 25, 213, 985, 1297, 1575
BshNI GGYRCC 4 cut(s) 682, 697, 850, 1375
BshVI ATCGAT 1 cut(s) 1584
BsiHKAI GWGCWC 1 cut(s) 1267
BsiHKCI CYCGRG 1 cut(s) 31
BsiSI CCGG 3 cut(s) 9, 32, 677
BsmAI GTCTC 4 cut(s) 426, 465, 485, 1103
BsnI GGCC 5 cut(s) 25, 213, 985, 1297, 1575
BsoBI CYCGRG 1 cut(s) 31
Bsp1286I GDGCHC 3 cut(s) 38, 1267, 1633
Bsp13I TCCGGA 1 cut(s) 8
Bsp1407I TGTACA 2 cut(s) 192, 1615
Bsp143I GATC 8 cut(s) 11, 182, 391, 452, 462, 808, 1245, 1534
Bsp19I CCATGG 1 cut(s) 135
BspACI CCGC 3 cut(s) 827, 1203, 1466
BspANI GGCC 5 cut(s) 25, 213, 985, 1297, 1575
BspDI ATCGAT 1 cut(s) 1584
BspEI TCCGGA 1 cut(s) 8
BspFNI CGCG 1 cut(s) 56
BspLI GGNNCC 9 cut(s) 37, 142, 684, 699, 810, 852, 986, 1377, 1632
BspMI ACCTGC 1 cut(s) 931
BspPI GGATC 4 cut(s) 19, 457, 803, 816
BspT107I GGYRCC 4 cut(s) 682, 697, 850, 1375
BsrFI RCCGGY 1 cut(s) 676
BsrGI TGTACA 2 cut(s) 192, 1615
BsrI ACTGG 1 cut(s) 1054
BssAI RCCGGY 1 cut(s) 676
BssECI CCNNGG 7 cut(s) 31, 39, 135, 153, 1292, 1315, 1316
BssMI GATC 8 cut(s) 11, 182, 391, 452, 462, 808, 1245, 1534
BssNI GRCGYC 2 cut(s) 5, 698
BssT1I CCWWGG 2 cut(s) 39, 135
Bst2UI CCWGG 6 cut(s) 101, 155, 1020, 1164, 1293, 1317
Bst4CI ACNGT 4 cut(s) 253, 327, 897, 1388
BstACI GRCGYC 2 cut(s) 5, 698
BstAUI TGTACA 2 cut(s) 192, 1615
BstC8I GCNNGC 3 cut(s) 215, 522, 1127
BstDSI CCRYGG 1 cut(s) 135
BstENI CCTNNNNNAGG 1 cut(s) 1647
BstF5I GGATG 4 cut(s) 781, 1483, 1566, 1658
BstFNI CGCG 1 cut(s) 56
BstH2I RGCGCY 1 cut(s) 701
BstHHI GCGC 2 cut(s) 294, 700
BstKTI GATC 8 cut(s) 14, 185, 394, 455, 465, 811, 1248, 1537
BstMAI GTCTC 4 cut(s) 426, 465, 485, 1103
BstMBI GATC 8 cut(s) 11, 182, 391, 452, 462, 808, 1245, 1534
BstMWI GCNNNNNNNGC 4 cut(s) 42, 967, 1228, 1262
BstNI CCWGG 6 cut(s) 101, 155, 1020, 1164, 1293, 1317
BstNSI RCATGY 1 cut(s) 1129
BstSCI CCNGG 8 cut(s) 30, 31, 99, 153, 1018, 1162, 1291, 1315
BstUI CGCG 1 cut(s) 56
BstV1I GCAGC 4 cut(s) 105, 190, 982, 1240
BstV2I GAAGAC 3 cut(s) 90, 228, 608
BstX2I RGATCY 3 cut(s) 452, 462, 808
BstYI RGATCY 3 cut(s) 452, 462, 808
Bsu15I ATCGAT 1 cut(s) 1584
BsuI GTATCC 3 cut(s) 918, 960, 1014
BsuRI GGCC 5 cut(s) 25, 213, 985, 1297, 1575
BsuTUI ATCGAT 1 cut(s) 1584
BtgI CCRYGG 1 cut(s) 135
BtsCI GGATG 4 cut(s) 781, 1483, 1566, 1658
BveI ACCTGC 1 cut(s) 931
Cac8I GCNNGC 3 cut(s) 215, 522, 1127
CaiI CAGNNNCTG 1 cut(s) 466
CfoI GCGC 2 cut(s) 294, 700
Cfr10I RCCGGY 1 cut(s) 676
Cfr13I GGNCC 3 cut(s) 24, 984, 1295
Cfr9I CCCGGG 1 cut(s) 31
ClaI ATCGAT 1 cut(s) 1584
CseI GACGC 1 cut(s) 45
CsiI ACCWGGT 2 cut(s) 1018, 1162
Csp6I GTAC 3 cut(s) 193, 1323, 1616
CviAII CATG 7 cut(s) 136, 265, 289, 395, 1126, 1330, 1519
CviQI GTAC 3 cut(s) 193, 1323, 1616
DinI GGCGCC 1 cut(s) 699
DpnI GATC 8 cut(s) 13, 184, 393, 454, 464, 810, 1247, 1536
DpnII GATC 8 cut(s) 11, 182, 391, 452, 462, 808, 1245, 1534
DraI TTTAAA 1 cut(s) 384
EaeI YGGCCR 2 cut(s) 211, 1573
Ecl136II GAGCTC 1 cut(s) 1265
Eco130I CCWWGG 2 cut(s) 39, 135
Eco24I GRGCYC 3 cut(s) 38, 1267, 1633
Eco32I GATATC 1 cut(s) 1400
Eco53kI GAGCTC 1 cut(s) 1265
Eco57I CTGAAG 2 cut(s) 240, 500
Eco88I CYCGRG 1 cut(s) 31
EcoICRI GAGCTC 1 cut(s) 1265
EcoNI CCTNNNNNAGG 1 cut(s) 1647
EcoO109I RGGNCCY 1 cut(s) 984
EcoRII CCWGG 6 cut(s) 99, 153, 1018, 1162, 1291, 1315
EcoRV GATATC 1 cut(s) 1400
EcoT14I CCWWGG 2 cut(s) 39, 135
EcoT38I GRGCYC 3 cut(s) 38, 1267, 1633
EgeI GGCGCC 1 cut(s) 699
EheI GGCGCC 1 cut(s) 699
ErhI CCWWGG 2 cut(s) 39, 135
FaeI CATG 7 cut(s) 139, 268, 292, 398, 1129, 1333, 1522
FatI CATG 7 cut(s) 135, 264, 288, 394, 1125, 1329, 1518
FauI CCCGC 1 cut(s) 834
FauNDI CATATG 1 cut(s) 1452
FbaI TGATCA 2 cut(s) 391, 1534
Fnu4HI GCNGC 4 cut(s) 94, 204, 971, 1229
FokI GGATG 3 cut(s) 768, 1470, 1573
FriOI GRGCYC 3 cut(s) 38, 1267, 1633
Fsp4HI GCNGC 4 cut(s) 94, 204, 971, 1229
FspBI CTAG 1 cut(s) 843
GlaI GCGC 2 cut(s) 293, 699
GluI GCNGC 4 cut(s) 94, 204, 971, 1229
GsaI CCCAGC 1 cut(s) 134
GsuI CTGGAG 2 cut(s) 1089, 1389
HaeII RGCGCY 1 cut(s) 701
HaeIII GGCC 5 cut(s) 25, 213, 985, 1297, 1575
HapII CCGG 3 cut(s) 9, 32, 677
HgaI GACGC 1 cut(s) 45
HhaI GCGC 2 cut(s) 294, 700
Hin1I GRCGYC 2 cut(s) 5, 698
Hin1II CATG 7 cut(s) 139, 268, 292, 398, 1129, 1333, 1522
Hin6I GCGC 2 cut(s) 292, 698
HinP1I GCGC 2 cut(s) 292, 698
HincII GTYRAC 3 cut(s) 1025, 1055, 1085
HindII GTYRAC 3 cut(s) 1025, 1055, 1085
HindIII AAGCTT 1 cut(s) 512
HinfI GANTC 8 cut(s) 104, 224, 407, 493, 790, 1111, 1423, 1462
HpaII CCGG 3 cut(s) 9, 32, 677
HphI GGTGA 7 cut(s) 177, 377, 570, 1286, 1292, 1525, 1544
Hpy166II GTNNAC 6 cut(s) 195, 314, 1025, 1055, 1085, 1516
Hpy188III TCNNGA 7 cut(s) 9, 389, 425, 460, 466, 1106, 1555
Hpy8I GTNNAC 6 cut(s) 195, 314, 1025, 1055, 1085, 1516
Hpy99I CGWCG 1 cut(s) 19
HpyAV CCTTC 2 cut(s) 296, 1340
HpyCH4III ACNGT 4 cut(s) 253, 327, 897, 1388
HpyCH4IV ACGT 1 cut(s) 1539
HpyCH4V TGCA 8 cut(s) 439, 524, 835, 946, 970, 1135, 1307, 1544
HpyF10VI GCNNNNNNNGC 4 cut(s) 42, 967, 1228, 1262
HpySE526I ACGT 1 cut(s) 1539
Hsp92I GRCGYC 2 cut(s) 5, 698
Hsp92II CATG 7 cut(s) 139, 268, 292, 398, 1129, 1333, 1522
HspAI GCGC 2 cut(s) 292, 698
KasI GGCGCC 1 cut(s) 697
Kpn2I TCCGGA 1 cut(s) 8
Ksp22I TGATCA 2 cut(s) 391, 1534
Kzo9I GATC 8 cut(s) 11, 182, 391, 452, 462, 808, 1245, 1534
LmnI GCTCC 5 cut(s) 41, 80, 1205, 1262, 1636
Lsp1109I GCAGC 4 cut(s) 105, 190, 982, 1240
LweI GCATC 3 cut(s) 360, 790, 1171
MabI ACCWGGT 2 cut(s) 1018, 1162
MaeI CTAG 1 cut(s) 843
MaeII ACGT 1 cut(s) 1539
MaeIII GTNAC 5 cut(s) 321, 712, 930, 1382, 1478
MalI GATC 8 cut(s) 13, 184, 393, 454, 464, 810, 1247, 1536
MboI GATC 8 cut(s) 11, 182, 391, 452, 462, 808, 1245, 1534
MboII GAAGA 5 cut(s) 95, 233, 528, 531, 613
MflI RGATCY 3 cut(s) 452, 462, 808
MhlI GDGCHC 3 cut(s) 38, 1267, 1633
MlsI TGGCCA 2 cut(s) 213, 1575
MluCI AATT 8 cut(s) 145, 243, 306, 332, 503, 632, 917, 1469
MluNI TGGCCA 2 cut(s) 213, 1575
Mly113I GGCGCC 1 cut(s) 698
MlyI GAGTC 6 cut(s) 98, 218, 487, 799, 1105, 1417
MmeI TCCRAC 2 cut(s) 309, 916
Mox20I TGGCCA 2 cut(s) 213, 1575
MroI TCCGGA 1 cut(s) 8
MroXI GAANNNNTTC 2 cut(s) 145, 310
MscI TGGCCA 2 cut(s) 213, 1575
MseI TTAA 2 cut(s) 383, 1590
MslI CAYNNNNRTG 1 cut(s) 1130
Msp20I TGGCCA 2 cut(s) 213, 1575
MspI CCGG 3 cut(s) 9, 32, 677
MspR9I CCNGG 8 cut(s) 32, 33, 101, 155, 1020, 1164, 1293, 1317
MvaI CCWGG 6 cut(s) 101, 155, 1020, 1164, 1293, 1317
MvnI CGCG 1 cut(s) 56
MwoI GCNNNNNNNGC 4 cut(s) 42, 967, 1228, 1262
NarI GGCGCC 1 cut(s) 698
NciI CCSGG 2 cut(s) 32, 33
NcoI CCATGG 1 cut(s) 135
NdeI CATATG 1 cut(s) 1452
NdeII GATC 8 cut(s) 11, 182, 391, 452, 462, 808, 1245, 1534
NlaIII CATG 7 cut(s) 139, 268, 292, 398, 1129, 1333, 1522
NlaIV GGNNCC 9 cut(s) 37, 142, 684, 699, 810, 852, 986, 1377, 1632
NmuCI GTSAC 2 cut(s) 321, 712
NspI RCATGY 1 cut(s) 1129
PaeI GCATGC 1 cut(s) 1129
PaqCI CACCTGC 1 cut(s) 931
PasI CCCWGGG 1 cut(s) 1316
PcsI WCGNNNNNNNCGW 1 cut(s) 60
PdmI GAANNNNTTC 2 cut(s) 145, 310
PfeI GAWTC 2 cut(s) 407, 1462
PflMI CCANNNNNTGG 1 cut(s) 1561
PkrI GCNGC 4 cut(s) 95, 205, 972, 1230
PleI GAGTC 6 cut(s) 98, 218, 487, 798, 1105, 1417
PluTI GGCGCC 1 cut(s) 701
PpsI GAGTC 6 cut(s) 98, 218, 487, 798, 1105, 1417
Psp124BI GAGCTC 1 cut(s) 1267
Psp6I CCWGG 6 cut(s) 99, 153, 1018, 1162, 1291, 1315
PspFI CCCAGC 1 cut(s) 130
PspGI CCWGG 6 cut(s) 99, 153, 1018, 1162, 1291, 1315
PspN4I GGNNCC 9 cut(s) 37, 142, 684, 699, 810, 852, 986, 1377, 1632
PspPI GGNCC 3 cut(s) 24, 984, 1295
PsrI GAACNNNNNNTAC 4 cut(s) 1025, 1055, 1057, 1087
PstNI CAGNNNCTG 1 cut(s) 466
PsuI RGATCY 3 cut(s) 452, 462, 808
RsaI GTAC 3 cut(s) 194, 1324, 1617
RsaNI GTAC 3 cut(s) 193, 1323, 1616
RseI CAYNNNNRTG 1 cut(s) 1130
SacI GAGCTC 1 cut(s) 1267
SaqAI TTAA 2 cut(s) 383, 1590
SatI GCNGC 4 cut(s) 94, 204, 971, 1229
Sau3AI GATC 8 cut(s) 11, 182, 391, 452, 462, 808, 1245, 1534
Sau96I GGNCC 3 cut(s) 24, 984, 1295
SchI GAGTC 6 cut(s) 98, 218, 487, 799, 1105, 1417
ScrFI CCNGG 8 cut(s) 32, 33, 101, 155, 1020, 1164, 1293, 1317
SduI GDGCHC 3 cut(s) 38, 1267, 1633
SexAI ACCWGGT 2 cut(s) 1018, 1162
SfaNI GCATC 3 cut(s) 360, 790, 1171
SfoI GGCGCC 1 cut(s) 699
SmaI CCCGGG 1 cut(s) 33
SmiI ATTTAAAT 1 cut(s) 384
SmiMI CAYNNNNRTG 1 cut(s) 1130
SmlI CTYRAG 3 cut(s) 416, 425, 870
SmoI CTYRAG 3 cut(s) 416, 425, 870
SphI GCATGC 1 cut(s) 1129
Sse9I AATT 8 cut(s) 145, 243, 306, 332, 503, 632, 917, 1469
SsiI CCGC 3 cut(s) 827, 1203, 1466
SspDI GGCGCC 1 cut(s) 697
SspI AATATT 1 cut(s) 797
SspMI CTAG 1 cut(s) 843
SstI GAGCTC 1 cut(s) 1267
StyD4I CCNGG 8 cut(s) 30, 31, 99, 153, 1018, 1162, 1291, 1315
StyI CCWWGG 2 cut(s) 39, 135
SwaI ATTTAAAT 1 cut(s) 384
TaaI ACNGT 4 cut(s) 253, 327, 897, 1388
TaiI ACGT 1 cut(s) 1542
TaqI TCGA 3 cut(s) 820, 1148, 1584
TasI AATT 8 cut(s) 145, 243, 306, 332, 503, 632, 917, 1469
TatI WGTACW 3 cut(s) 192, 1322, 1615
TfiI GAWTC 2 cut(s) 407, 1462
Tru1I TTAA 2 cut(s) 383, 1590
Tru9I TTAA 2 cut(s) 383, 1590
TseFI GTSAC 2 cut(s) 321, 712
TseI GCWGC 4 cut(s) 93, 203, 970, 1228
Tsp45I GTSAC 2 cut(s) 321, 712
TspDTI ATGAA 4 cut(s) 281, 531, 1462, 1611
TspMI CCCGGG 1 cut(s) 31
Van91I CCANNNNNTGG 1 cut(s) 1561
XagI CCTNNNNNAGG 1 cut(s) 1647
XceI RCATGY 1 cut(s) 1129
XmaI CCCGGG 1 cut(s) 31
XmnI GAANNNNTTC 2 cut(s) 145, 310
XspI CTAG 1 cut(s) 843
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.