MD09G1247500.v1.1

UBA-like domain (DUF1421)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr09
OG0010117
Physical Location & Seq
Reverse (-)
31737202 .. 31740423
3222 bp
Loading structure...
UTR
Exon/CDS
Intron
MD09G1247500.v1.1.491

Sequence Viewer

Length: 1566 bp
ATGGCGACTGGATCATCGGGTCGGGGCAACCCGGTGTCACAGGGATTCGATTTCGGGTCGGACGACATTCTCTGCTCCTACGAGGACTACGGCAACCAGGACTCCTCCAATGGCAACCACAGCGAACCAGTCATGGGGAATAATCCCGGGAAGGATTTTCATAAAAGTAGAATGTCGAGACAATCAATGTTCTCTTCTCCTGCCTATAGCCAGCCGGAAGAATCTCTTCACCAAGATGTAATTGCTACTGTTGAAAAGAGCATGAAAAAGTATGCCGACAATCTCATGCGCTTTCTTGAAGGAATTAGTTCACGGCTTTCGCAGCTGGAATTGTATTGCTACAATCTTGATAAGTCAATTGGTGAGATGCGAACTGATTTAGGTCGTGATCATGGAGAAGCAGATTCAAAGCTCAAGTCTCTTGAGAAACATCTTCAAGAAGTCCATAGGTCTGTCCAGATCCTAAGGGACAAGCAAGAACTTGCAGAGACTCAGAAAGAATTAGCTAAGCTTCAGCTTGCACAGAAAGGATCTGGATCATCAACCCATTCCCAATCCAATGAGGAGAGAGCTTCACCACATACCTCTGATGCTCAAAAGGCTGACAACCCGTCTGAAACACATAACCAGCAATTAGCTCTAGCCCTGCCCCATCAAGTGGCGCCACAGCAGCAGCCTGTGGCAGCTCCCACGCAGCCCCCACCACAGAATGTGACTCAGCAACAATCCTATTATTTACCAACCCAGCTACAAAATCCACCACCTCAGGCACATCCGCAGAATCAATATTTGCCTCCTGATTCTCAGTATCAAAACCCCCAAGTGCAAGAAATGCCAAGGGTGACACCACAGCCAACACAATCGCAAGTGAATCAGAAACAAGTCCAGTCGTTCCCTCAGTATCAGCAGCAATTACCACAGAGTCAGCAGGTGCAATTTCCACAACAGCCCTCTATGCAACCCCAGATGAGGCCACCACCAACAAATGTCTACCCCTATCCTCCTGGTCAACAAACAAATCCATCTCCTCCAGAGTCTGTACCAAACAGCATGCCGATGCAAGTGCCATATTCCAACATTCCTCAACCAGGATCTGGTCGTTCTGATCCCATGCCTTTTGGATATGGTGGAGCTGGTCGAACAATGCAACAGCAGCCTCCACCTCAGCAAATCAAGGGGGCTTTTGGAGCTCAACCTGGTGAGGGATATGGTGCTGCTGGCCCTCACCCTGCATTTCCTCCAGGGAGTACATATACGGTCTATGACAGTGAAGGGGGTAGAACTCAATATTCTGCCCATTATGGATATCCTCCTACGAGTATCTCTCACCATATGCCACAGCCAACAACAGCTCCAAATGTTATGGCTCGGAATCCACAATTCCCGGGCAACCACCCTTACAATGAGTTGATTGAGAAATTGGTTCCCATGGGGTTCAGGAGTGATCACGTTGTGAGTGTGATTCAGAGGATGGAAGAAAGTGGTCAACCCGTTGATTTTAATGCAGTGATTGACAGGTTGAATGCACATCCATCTGGGGGTCCCCAGAGAGGATGGTCAGGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1421

Protein Analysis

522

Amino Acids

57.51

Weight (kDa)

6.05

Isoelectric Point (pI)

64.24

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF1421 PF07223 467 - 510 2.5e-22 UBA-like domain (DUF1421)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 919
Acc36I ACCTGC 1 cut(s) 919
AccB1I GGYRCC 1 cut(s) 661
AccB7I CCANNNNNTGG 2 cut(s) 658, 1094
AccI GTMKAC 1 cut(s) 990
AciI CCGC 1 cut(s) 776
AclWI GGATC 6 cut(s) 19, 454, 538, 544, 1099, 1100
AcuI CTGAAG 1 cut(s) 497
AcyI GRCGYC 1 cut(s) 662
AdeI CACNNNGTG 1 cut(s) 1453
AfaI GTAC 2 cut(s) 1041, 1249
AfiI CCNNNNNNNGG 8 cut(s) 134, 658, 969, 1088, 1094, 1202, 1538, 1550
AgsI TTSAA 5 cut(s) 254, 299, 408, 437, 1522
AhdI GACNNNNNGTC 1 cut(s) 610
AjnI CCWGG 5 cut(s) 96, 1003, 1087, 1195, 1240
Alw21I GWGCWC 1 cut(s) 1192
Alw26I GTCTC 3 cut(s) 172, 423, 482
AlwI GGATC 6 cut(s) 19, 454, 538, 544, 1099, 1100
AlwNI CAGNNNCTG 2 cut(s) 1037, 1094
Ama87I CYCGRG 2 cut(s) 146, 1384
AoxI GGCC 2 cut(s) 971, 1219
ApeKI GCWGC 8 cut(s) 322, 670, 673, 683, 694, 907, 1153, 1214
ArsI GACNNNNNNTTYG 2 cut(s) 401, 433
Asp700I GAANNNNTTC 2 cut(s) 225, 307
AspLEI GCGC 2 cut(s) 291, 664
AspS9I GGNCC 2 cut(s) 1220, 1541
AsuC2I CCSGG 5 cut(s) 32, 147, 148, 1385, 1386
AsuHPI GGTGA 7 cut(s) 221, 374, 567, 853, 1211, 1217, 1319
AvaI CYCGRG 2 cut(s) 146, 1384
AvaII GGWCC 1 cut(s) 1541
AxyI CCTNAGG 2 cut(s) 464, 765
BanI GGYRCC 1 cut(s) 661
BanII GRGCYC 1 cut(s) 1192
Bbv12I GWGCWC 1 cut(s) 1192
BbvCI CCTCAGC 1 cut(s) 1164
BbvI GCAGC 8 cut(s) 334, 682, 685, 695, 706, 919, 1165, 1201
BccI CCATC 5 cut(s) 660, 1030, 1465, 1540, 1548
BceAI ACGGC 2 cut(s) 106, 329
BcgI CGANNNNNNTGC 2 cut(s) 1045, 1079
BciT130I CCWGG 5 cut(s) 98, 1005, 1089, 1197, 1242
BclI TGATCA 2 cut(s) 388, 1444
BcnI CCSGG 5 cut(s) 32, 147, 148, 1385, 1386
BcoDI GTCTC 3 cut(s) 172, 423, 482
BfaI CTAG 1 cut(s) 641
BfmI CTRYAG 1 cut(s) 205
BfoI RGCGCY 1 cut(s) 665
BfuAI ACCTGC 1 cut(s) 919
BisI GCNGC 8 cut(s) 323, 671, 674, 684, 695, 908, 1154, 1215
BlpI GCTNAGC 1 cut(s) 507
BlsI GCNGC 8 cut(s) 324, 672, 675, 685, 696, 909, 1155, 1216
Bme18I GGWCC 1 cut(s) 1541
BmeRI GACNNNNNGTC 1 cut(s) 610
BmeT110I CYCGRG 2 cut(s) 146, 1384
BmgT120I GGNCC 2 cut(s) 1220, 1541
BmiI GGNNCC 4 cut(s) 663, 1425, 1542, 1543
BmsI GCATC 3 cut(s) 357, 580, 1047
BplI GAGNNNNNCTC 2 cut(s) 1309, 1341
BpmI CTGGAG 2 cut(s) 1014, 1224
Bpu10I CCTNAGC 1 cut(s) 1164
Bpu1102I GCTNAGC 1 cut(s) 507
BpuEI CTTGAG 2 cut(s) 398, 443
BpuMI CCSGG 5 cut(s) 32, 147, 148, 1385, 1386
BsaBI GATNNNNATC 1 cut(s) 535
BsaHI GRCGYC 1 cut(s) 662
BsaJI CCNNGG 5 cut(s) 146, 836, 1241, 1384, 1428
BsaXI ACNNNNNCTCC 4 cut(s) 86, 116, 1336, 1366
Bsc4I CCNNNNNNNGG 8 cut(s) 134, 658, 969, 1088, 1094, 1202, 1538, 1550
Bse1I ACTGG 3 cut(s) 13, 128, 886
Bse21I CCTNAGG 2 cut(s) 464, 765
Bse8I GATNNNNATC 1 cut(s) 535
BseBI CCWGG 5 cut(s) 98, 1005, 1089, 1197, 1242
BseDI CCNNGG 5 cut(s) 146, 836, 1241, 1384, 1428
BseGI GGATG 4 cut(s) 772, 1476, 1528, 1559
BseJI GATNNNNATC 1 cut(s) 535
BseLI CCNNNNNNNGG 8 cut(s) 134, 658, 969, 1088, 1094, 1202, 1538, 1550
BseMII CTCAG 6 cut(s) 506, 731, 779, 818, 911, 1178
BseNI ACTGG 3 cut(s) 13, 128, 886
BseRI GAGGAG 3 cut(s) 94, 578, 1017
BseXI GCAGC 8 cut(s) 334, 682, 685, 695, 706, 919, 1165, 1201
BseYI CCCAGC 1 cut(s) 744
BshFI GGCC 2 cut(s) 973, 1221
BshNI GGYRCC 1 cut(s) 661
BsiHKAI GWGCWC 1 cut(s) 1192
BsiHKCI CYCGRG 2 cut(s) 146, 1384
BsiSI CCGG 4 cut(s) 32, 147, 215, 1385
BslFI GGGAC 2 cut(s) 482, 1527
BslI CCNNNNNNNGG 8 cut(s) 134, 658, 969, 1088, 1094, 1202, 1538, 1550
BsmAI GTCTC 3 cut(s) 172, 423, 482
BsmFI GGGAC 2 cut(s) 482, 1527
BsmI GAATGC 1 cut(s) 1528
BsnI GGCC 2 cut(s) 973, 1221
BsoBI CYCGRG 2 cut(s) 146, 1384
Bsp1286I GDGCHC 1 cut(s) 1192
Bsp143I GATC 8 cut(s) 11, 388, 459, 530, 536, 1091, 1105, 1444
Bsp1720I GCTNAGC 1 cut(s) 507
Bsp19I CCATGG 1 cut(s) 1428
BspACI CCGC 1 cut(s) 776
BspANI GGCC 2 cut(s) 973, 1221
BspCNI CTCAG 6 cut(s) 505, 730, 778, 817, 910, 1177
BspLI GGNNCC 4 cut(s) 663, 1425, 1542, 1543
BspMI ACCTGC 1 cut(s) 919
BspPI GGATC 6 cut(s) 19, 454, 538, 544, 1099, 1100
BspT107I GGYRCC 1 cut(s) 661
BsrI ACTGG 3 cut(s) 13, 128, 886
BssECI CCNNGG 5 cut(s) 146, 836, 1241, 1384, 1428
BssMI GATC 8 cut(s) 11, 388, 459, 530, 536, 1091, 1105, 1444
BssNI GRCGYC 1 cut(s) 662
BssT1I CCWWGG 2 cut(s) 836, 1428
Bst2UI CCWGG 5 cut(s) 98, 1005, 1089, 1197, 1242
Bst4CI ACNGT 3 cut(s) 250, 1258, 1268
Bst6I CTCTTC 2 cut(s) 199, 231
BstACI GRCGYC 1 cut(s) 662
BstAPI GCANNNNNTGC 1 cut(s) 832
BstC8I GCNNGC 4 cut(s) 212, 519, 1052, 1219
BstDEI CTNAG 8 cut(s) 464, 492, 507, 717, 765, 804, 897, 1164
BstDSI CCRYGG 1 cut(s) 1428
BstENI CCTNNNNNAGG 1 cut(s) 1086
BstF5I GGATG 4 cut(s) 772, 1476, 1528, 1559
BstH2I RGCGCY 1 cut(s) 665
BstHHI GCGC 2 cut(s) 291, 664
BstKTI GATC 8 cut(s) 14, 391, 462, 533, 539, 1094, 1108, 1447
BstMAI GTCTC 3 cut(s) 172, 423, 482
BstMBI GATC 8 cut(s) 11, 388, 459, 530, 536, 1091, 1105, 1444
BstMWI GCNNNNNNNGC 8 cut(s) 120, 322, 599, 670, 832, 955, 1153, 1187
BstNI CCWGG 5 cut(s) 98, 1005, 1089, 1197, 1242
BstNSI RCATGY 1 cut(s) 1054
BstSFI CTRYAG 1 cut(s) 205
BstV1I GCAGC 8 cut(s) 334, 682, 685, 695, 706, 919, 1165, 1201
BstX2I RGATCY 3 cut(s) 459, 530, 1091
BstYI RGATCY 3 cut(s) 459, 530, 1091
Bsu36I CCTNAGG 2 cut(s) 464, 765
BsuRI GGCC 2 cut(s) 973, 1221
BtgI CCRYGG 1 cut(s) 1428
BtsCI GGATG 4 cut(s) 772, 1476, 1528, 1559
BtsI GCAGTG 1 cut(s) 1512
BtsIMutI CAGTG 2 cut(s) 1273, 1512
BveI ACCTGC 1 cut(s) 919
Cac8I GCNNGC 4 cut(s) 212, 519, 1052, 1219
CaiI CAGNNNCTG 2 cut(s) 1037, 1094
CfoI GCGC 2 cut(s) 291, 664
Cfr13I GGNCC 2 cut(s) 1220, 1541
Cfr9I CCCGGG 2 cut(s) 146, 1384
CsiI ACCWGGT 1 cut(s) 1195
Csp6I GTAC 2 cut(s) 1040, 1248
CviAII CATG 7 cut(s) 133, 262, 286, 392, 1051, 1111, 1429
CviQI GTAC 2 cut(s) 1040, 1248
DdeI CTNAG 8 cut(s) 464, 492, 507, 717, 765, 804, 897, 1164
DinI GGCGCC 1 cut(s) 663
DpnI GATC 8 cut(s) 13, 390, 461, 532, 538, 1093, 1107, 1446
DpnII GATC 8 cut(s) 11, 388, 459, 530, 536, 1091, 1105, 1444
DraIII CACNNNGTG 1 cut(s) 1453
DriI GACNNNNNGTC 1 cut(s) 610
Eam1104I CTCTTC 2 cut(s) 199, 231
Eam1105I GACNNNNNGTC 1 cut(s) 610
EarI CTCTTC 2 cut(s) 199, 231
Ecl136II GAGCTC 1 cut(s) 1190
Eco130I CCWWGG 2 cut(s) 836, 1428
Eco24I GRGCYC 1 cut(s) 1192
Eco32I GATATC 1 cut(s) 1307
Eco47I GGWCC 1 cut(s) 1541
Eco53kI GAGCTC 1 cut(s) 1190
Eco57I CTGAAG 1 cut(s) 497
Eco81I CCTNAGG 2 cut(s) 464, 765
Eco88I CYCGRG 2 cut(s) 146, 1384
EcoICRI GAGCTC 1 cut(s) 1190
EcoNI CCTNNNNNAGG 1 cut(s) 1086
EcoO109I RGGNCCY 1 cut(s) 1541
EcoRII CCWGG 5 cut(s) 96, 1003, 1087, 1195, 1240
EcoRV GATATC 1 cut(s) 1307
EcoT14I CCWWGG 2 cut(s) 836, 1428
EcoT38I GRGCYC 1 cut(s) 1192
EgeI GGCGCC 1 cut(s) 663
EheI GGCGCC 1 cut(s) 663
ErhI CCWWGG 2 cut(s) 836, 1428
FaeI CATG 7 cut(s) 136, 265, 289, 395, 1054, 1114, 1432
FalI AAGNNNNNCTT 2 cut(s) 210, 242
FaqI GGGAC 2 cut(s) 482, 1527
FatI CATG 7 cut(s) 132, 261, 285, 391, 1050, 1110, 1428
FauNDI CATATG 1 cut(s) 1332
FbaI TGATCA 2 cut(s) 388, 1444
FblI GTMKAC 1 cut(s) 990
Fnu4HI GCNGC 8 cut(s) 323, 671, 674, 684, 695, 908, 1154, 1215
FokI GGATG 3 cut(s) 759, 1483, 1515
FriOI GRGCYC 1 cut(s) 1192
Fsp4HI GCNGC 8 cut(s) 323, 671, 674, 684, 695, 908, 1154, 1215
FspBI CTAG 1 cut(s) 641
GlaI GCGC 2 cut(s) 290, 663
GluI GCNGC 8 cut(s) 323, 671, 674, 684, 695, 908, 1154, 1215
GsaI CCCAGC 1 cut(s) 748
GsuI CTGGAG 2 cut(s) 1014, 1224
HaeII RGCGCY 1 cut(s) 665
HaeIII GGCC 2 cut(s) 973, 1221
HapII CCGG 4 cut(s) 32, 147, 215, 1385
HhaI GCGC 2 cut(s) 291, 664
Hin1I GRCGYC 1 cut(s) 662
Hin1II CATG 7 cut(s) 136, 265, 289, 395, 1054, 1114, 1432
Hin6I GCGC 2 cut(s) 289, 662
HinP1I GCGC 2 cut(s) 289, 662
HincII GTYRAC 2 cut(s) 1010, 1487
HindII GTYRAC 2 cut(s) 1010, 1487
HindIII AAGCTT 1 cut(s) 509
HpaII CCGG 4 cut(s) 32, 147, 215, 1385
HphI GGTGA 7 cut(s) 221, 374, 567, 853, 1211, 1217, 1319
Hpy166II GTNNAC 4 cut(s) 311, 991, 1010, 1487
Hpy188I TCNGA 8 cut(s) 61, 495, 589, 616, 876, 1105, 1371, 1467
Hpy8I GTNNAC 4 cut(s) 311, 991, 1010, 1487
HpyAV CCTTC 3 cut(s) 145, 293, 1265
HpyCH4III ACNGT 3 cut(s) 250, 1258, 1268
HpyCH4IV ACGT 1 cut(s) 1449
HpyF10VI GCNNNNNNNGC 8 cut(s) 120, 322, 599, 670, 832, 955, 1153, 1187
HpyF3I CTNAG 8 cut(s) 464, 492, 507, 717, 765, 804, 897, 1164
HpySE526I ACGT 1 cut(s) 1449
Hsp92I GRCGYC 1 cut(s) 662
Hsp92II CATG 7 cut(s) 136, 265, 289, 395, 1054, 1114, 1432
HspAI GCGC 2 cut(s) 289, 662
KasI GGCGCC 1 cut(s) 661
KflI GGGWCCC 1 cut(s) 1541
Ksp22I TGATCA 2 cut(s) 388, 1444
Kzo9I GATC 8 cut(s) 11, 388, 459, 530, 536, 1091, 1105, 1444
LmnI GCTCC 5 cut(s) 80, 691, 1130, 1187, 1357
Lsp1109I GCAGC 8 cut(s) 334, 682, 685, 695, 706, 919, 1165, 1201
LweI GCATC 3 cut(s) 357, 580, 1047
MabI ACCWGGT 1 cut(s) 1195
MaeI CTAG 1 cut(s) 641
MaeII ACGT 1 cut(s) 1449
MaeIII GTNAC 3 cut(s) 36, 712, 841
MalI GATC 8 cut(s) 13, 390, 461, 532, 538, 1093, 1107, 1446
MboI GATC 8 cut(s) 11, 388, 459, 530, 536, 1091, 1105, 1444
MboII GAAGA 5 cut(s) 186, 218, 230, 425, 1487
MfeI CAATTG 1 cut(s) 357
MflI RGATCY 3 cut(s) 459, 530, 1091
MhlI GDGCHC 1 cut(s) 1192
Mly113I GGCGCC 1 cut(s) 662
MlyI GAGTC 5 cut(s) 95, 484, 709, 931, 1043
MmeI TCCRAC 2 cut(s) 39, 1098
MroXI GAANNNNTTC 2 cut(s) 225, 307
MseI TTAA 1 cut(s) 1500
MslI CAYNNNNRTG 2 cut(s) 234, 1055
MspA1I CMGCKG 1 cut(s) 325
MspI CCGG 4 cut(s) 32, 147, 215, 1385
MunI CAATTG 1 cut(s) 357
Mva1269I GAATGC 1 cut(s) 1528
MvaI CCWGG 5 cut(s) 98, 1005, 1089, 1197, 1242
MwoI GCNNNNNNNGC 8 cut(s) 120, 322, 599, 670, 832, 955, 1153, 1187
NarI GGCGCC 1 cut(s) 662
NciI CCSGG 5 cut(s) 32, 147, 148, 1385, 1386
NcoI CCATGG 1 cut(s) 1428
NdeI CATATG 1 cut(s) 1332
NdeII GATC 8 cut(s) 11, 388, 459, 530, 536, 1091, 1105, 1444
NlaIII CATG 7 cut(s) 136, 265, 289, 395, 1054, 1114, 1432
NlaIV GGNNCC 4 cut(s) 663, 1425, 1542, 1543
NmuCI GTSAC 3 cut(s) 36, 712, 841
NspI RCATGY 1 cut(s) 1054
PaeI GCATGC 1 cut(s) 1054
PaqCI CACCTGC 1 cut(s) 919
PcsI WCGNNNNNNNCGW 1 cut(s) 60
PctI GAATGC 1 cut(s) 1528
PdmI GAANNNNTTC 2 cut(s) 225, 307
PfeI GAWTC 8 cut(s) 45, 221, 404, 781, 800, 871, 1372, 1462
PflMI CCANNNNNTGG 2 cut(s) 658, 1094
PkrI GCNGC 8 cut(s) 324, 672, 675, 685, 696, 909, 1155, 1216
PleI GAGTC 5 cut(s) 95, 484, 709, 930, 1042
PluTI GGCGCC 1 cut(s) 665
PpsI GAGTC 5 cut(s) 95, 484, 709, 930, 1042
PpuMI RGGWCCY 1 cut(s) 1541
Psp124BI GAGCTC 1 cut(s) 1192
Psp5II RGGWCCY 1 cut(s) 1541
Psp6I CCWGG 5 cut(s) 96, 1003, 1087, 1195, 1240
PspFI CCCAGC 1 cut(s) 744
PspGI CCWGG 5 cut(s) 96, 1003, 1087, 1195, 1240
PspN4I GGNNCC 4 cut(s) 663, 1425, 1542, 1543
PspPI GGNCC 2 cut(s) 1220, 1541
PspPPI RGGWCCY 1 cut(s) 1541
PstNI CAGNNNCTG 2 cut(s) 1037, 1094
PsuI RGATCY 3 cut(s) 459, 530, 1091
PvuII CAGCTG 1 cut(s) 325
RsaI GTAC 2 cut(s) 1041, 1249
RsaNI GTAC 2 cut(s) 1040, 1248
RseI CAYNNNNRTG 2 cut(s) 234, 1055
SacI GAGCTC 1 cut(s) 1192
SaqAI TTAA 1 cut(s) 1500
SatI GCNGC 8 cut(s) 323, 671, 674, 684, 695, 908, 1154, 1215
Sau3AI GATC 8 cut(s) 11, 388, 459, 530, 536, 1091, 1105, 1444
Sau96I GGNCC 2 cut(s) 1220, 1541
SchI GAGTC 5 cut(s) 95, 484, 709, 931, 1043
SduI GDGCHC 1 cut(s) 1192
SexAI ACCWGGT 1 cut(s) 1195
SfaNI GCATC 3 cut(s) 357, 580, 1047
SfcI CTRYAG 1 cut(s) 205
SfoI GGCGCC 1 cut(s) 663
SinI GGWCC 1 cut(s) 1541
SmaI CCCGGG 2 cut(s) 148, 1386
SmiMI CAYNNNNRTG 2 cut(s) 234, 1055
SmlI CTYRAG 2 cut(s) 413, 422
SmoI CTYRAG 2 cut(s) 413, 422
SphI GCATGC 1 cut(s) 1054
SsiI CCGC 1 cut(s) 776
SspDI GGCGCC 1 cut(s) 661
SspI AATATT 2 cut(s) 788, 1289
SspMI CTAG 1 cut(s) 641
SstI GAGCTC 1 cut(s) 1192
StyI CCWWGG 2 cut(s) 836, 1428
TaaI ACNGT 3 cut(s) 250, 1258, 1268
TaiI ACGT 1 cut(s) 1452
TaqI TCGA 3 cut(s) 48, 176, 1138
TatI WGTACW 1 cut(s) 1247
TfiI GAWTC 8 cut(s) 45, 221, 404, 781, 800, 871, 1372, 1462
Tru1I TTAA 1 cut(s) 1500
Tru9I TTAA 1 cut(s) 1500
TscAI CASTG 2 cut(s) 1273, 1512
TseFI GTSAC 3 cut(s) 36, 712, 841
TseI GCWGC 8 cut(s) 322, 670, 673, 683, 694, 907, 1153, 1214
Tsp45I GTSAC 3 cut(s) 36, 712, 841
TspDTI ATGAA 2 cut(s) 149, 278
TspMI CCCGGG 2 cut(s) 146, 1384
TspRI CASTG 2 cut(s) 1273, 1512
Van91I CCANNNNNTGG 2 cut(s) 658, 1094
VpaK11BI GGWCC 1 cut(s) 1541
XagI CCTNNNNNAGG 1 cut(s) 1086
XceI RCATGY 1 cut(s) 1054
XmaI CCCGGG 2 cut(s) 146, 1384
XmiI GTMKAC 1 cut(s) 990
XmnI GAANNNNTTC 2 cut(s) 225, 307
XspI CTAG 1 cut(s) 641
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.