Rroxscaffold_2G00117150

UBA-like domain (DUF1421)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
OG0010117
Physical Location & Seq
Reverse (-)
44653156 .. 44656274
3119 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00117150.1

Sequence Viewer

Length: 1671 bp
ATGGCGTCCGGATCGTCGGGTCGGCCCAACCCGGGCTCCAAGGGCTTTGATTTCGCGTCTGACGACATTCTCTGCTCCTACGAAGACTTTGGCAGCAACCAGGACTCCTCCAATGGAAGCCACAACGACCCAGCCATGGGAACCAATTCCACCCAGGATTTTCACAAAAGTAGAATGGCAAGATCACCAATGTACACTTCTGCTGCCTATGGCCAGCCTGAAGACTCTCTCAACCAAGAAGTAATTGCTACTGTTGAAAAGAGCATGAAAAAATATGCTGACAATCTCATGCGCTTCCTTGAAGGAATTAGTTCACGGCTGTCACAGTTGGAATTATATTGCTACAATGTTGATAAGTCAATCGGTGAGATGCGTTCTGATTTAAATCGTGATCATGGGGAGGCAGATTCAAAGCTCAAGTCTCTTGAGAAACATCTGCAAGAAGTCCATAGGTCTGTCCAGATCCTGAGAGACAAGCAAGAACTTGCTGAGACTCAAAAAGAATTAGCCAAGCTTCAGCTTGCACAGAAAGGATCTTCTTCATCAACCCATTCACAATCTAATGAGGAAAGAGCTTCACCACCTACCTCAGATGGTCAGAAGACTGACAACACATCTGAACATAACCAGCAATTAGCTCTTGCCTTGCCCCATCAAGTAGCACCACAACAACAGCCGGTGGCACCTCCCCCACAGGCGCCAACTCAGAATGTGACCCAACCACAACAGCCCTATTATTTACCTCAAACTCAGCTATCAAATCCACCACCCCCACAACAGCATCCTCAGAGTCAATATTTGGCTTCGGATCCTCAGTATCGAACCCCGCAACTGCAAGACCCTAGAGTGGCACCACAGCCAGCACAATCTCAAGTAAATCAACCACAAGTCCAACCGTTCCCTCAGTATCCACAGCAATTACCACAGCAATTACCTCAGCAGTTGCCTCAGCAGGTGCAGTATCCACAACAGCCCTCTGTGCAGCCCCAGATGAGGCCCCCATCAACACCTGTGTACCCACCATACCCACCTGGTCAACAGGCGAACCCACCATACCCACCTGGTCAACAGGCGAACCCACCATACCCATCTGGTCAACAGACGAACCCATCTCCTCCAGAGACTCTGCCAAACAGCATGCCAATGCAAGTATCGTATTCGAGTGTTCCTCAACCTGGTTCTGGTCGTTCTGATGCCATGCCTTTTGGATATAGCGGAGCTGGTAGAACAATGCCACAGCAGCCTCCACCTCAGCAGATCAAGGGTGCTTTTGGAGCTCAACAAGGTGATGCGTATGCCTCTGCTGGGCCTCACCCTGCACTTCCCCCAGGGAGTACATATATGATGTATGATAGTGAAGGAGGTAGAAATCATTATTCTGCTCAGGTGCCTCATTACAGTCAAGGTGGATATCCTCCAGCAAGTGCATCTCAGACTCCACAACCAACAACAGCTCCAAATCATATGGTTCGGAATCCGCAATTCATTCGTAACCATCCTTACAATGAGTTGATTGAGAAGTTGGTGAACATGGGTTTTAGGGGTGATCATGTTGCAAGTGTAATCCAGAGGATGGAGGAAAGTGGCCAAACCATCGATTTTAATGCTGTGATTGACAGGTTGAATGTACATTCATCTGGGGCTCCTCCTCAGAGAGGATGGTCAGGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1421

Protein Analysis

556

Amino Acids

61.03

Weight (kDa)

6.05

Isoelectric Point (pI)

69.57

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF1421 PF07223 501 - 545 5.2e-23 UBA-like domain (DUF1421)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 943
Acc36I ACCTGC 1 cut(s) 943
AccB1I GGYRCC 4 cut(s) 682, 697, 850, 1387
AccB7I CCANNNNNTGG 1 cut(s) 1573
AccII CGCG 1 cut(s) 56
AccIII TCCGGA 1 cut(s) 8
AciI CCGC 3 cut(s) 827, 1215, 1478
AclWI GGATC 5 cut(s) 19, 457, 541, 803, 816
AcoI YGGCCR 2 cut(s) 211, 1585
AcuI CTGAAG 2 cut(s) 240, 500
AcyI GRCGYC 2 cut(s) 5, 698
AfaI GTAC 4 cut(s) 194, 1016, 1336, 1629
AgsI TTSAA 4 cut(s) 257, 302, 411, 1624
AjnI CCWGG 6 cut(s) 99, 153, 1030, 1060, 1174, 1327
AjuI GAANNNNNNNTTGG 2 cut(s) 181, 213
AluBI AGCT 9 cut(s) 415, 514, 520, 575, 638, 754, 1220, 1277, 1454
AluI AGCT 9 cut(s) 415, 514, 520, 575, 638, 754, 1220, 1277, 1454
Alw21I GWGCWC 1 cut(s) 1279
Alw26I GTCTC 4 cut(s) 426, 465, 485, 1115
AlwI GGATC 5 cut(s) 19, 457, 541, 803, 816
AlwNI CAGNNNCTG 1 cut(s) 466
Ama87I CYCGRG 1 cut(s) 31
Aor13HI TCCGGA 1 cut(s) 8
AoxI GGCC 5 cut(s) 23, 211, 995, 1307, 1585
ApeKI GCWGC 4 cut(s) 93, 203, 982, 1240
ArsI GACNNNNNNTTYG 2 cut(s) 404, 436
Asp700I GAANNNNTTC 2 cut(s) 145, 310
AspLEI GCGC 2 cut(s) 294, 700
AspS9I GGNCC 3 cut(s) 24, 996, 1307
AsuC2I CCSGG 2 cut(s) 32, 33
AsuHPI GGTGA 7 cut(s) 177, 377, 570, 1298, 1304, 1537, 1556
AvaI CYCGRG 1 cut(s) 31
BaeI ACNNNNGTAYC 2 cut(s) 998, 1031
BalI TGGCCA 2 cut(s) 213, 1587
BamHI GGATCC 1 cut(s) 808
BanI GGYRCC 4 cut(s) 682, 697, 850, 1387
BanII GRGCYC 3 cut(s) 38, 1279, 1645
BbsI GAAGAC 3 cut(s) 90, 228, 608
Bbv12I GWGCWC 1 cut(s) 1279
BbvCI CCTCAGC 3 cut(s) 936, 948, 1251
BbvI GCAGC 4 cut(s) 105, 190, 994, 1252
BccI CCATC 9 cut(s) 587, 660, 1009, 1096, 1117, 1503, 1567, 1601, 1653
BceAI ACGGC 1 cut(s) 332
BcgI CGANNNNNNTGC 4 cut(s) 1469, 1503, 1586, 1620
BciT130I CCWGG 6 cut(s) 101, 155, 1032, 1062, 1176, 1329
BciVI GTATCC 2 cut(s) 918, 972
BclI TGATCA 2 cut(s) 391, 1546
BcnI CCSGG 2 cut(s) 32, 33
BcoDI GTCTC 4 cut(s) 426, 465, 485, 1115
BfaI CTAG 1 cut(s) 843
BfoI RGCGCY 1 cut(s) 701
BfuAI ACCTGC 1 cut(s) 943
BfuI GTATCC 2 cut(s) 918, 972
BisI GCNGC 4 cut(s) 94, 204, 983, 1241
BlsI GCNGC 4 cut(s) 95, 205, 984, 1242
Bme1390I CCNGG 8 cut(s) 32, 33, 101, 155, 1032, 1062, 1176, 1329
BmeT110I CYCGRG 1 cut(s) 31
BmgT120I GGNCC 3 cut(s) 24, 996, 1307
BmiI GGNNCC 9 cut(s) 37, 142, 684, 699, 810, 852, 998, 1389, 1644
BmrFI CCNGG 8 cut(s) 32, 33, 101, 155, 1032, 1062, 1176, 1329
BmsI GCATC 5 cut(s) 360, 790, 1183, 1279, 1436
BpiI GAAGAC 3 cut(s) 90, 228, 608
BplI GAGNNNNNCTC 2 cut(s) 1153, 1185
BpmI CTGGAG 2 cut(s) 1101, 1401
Bpu10I CCTNAGC 4 cut(s) 936, 948, 1251, 1383
BpuEI CTTGAG 3 cut(s) 401, 446, 855
BpuMI CCSGG 2 cut(s) 32, 33
Bsa29I ATCGAT 1 cut(s) 1596
BsaBI GATNNNNATC 1 cut(s) 384
BsaHI GRCGYC 2 cut(s) 5, 698
BsaJI CCNNGG 6 cut(s) 31, 39, 135, 153, 1327, 1328
BsaWI WCCGGW 1 cut(s) 8
BsaXI ACNNNNNCTCC 6 cut(s) 20, 50, 89, 119, 1438, 1468
Bse118I RCCGGY 1 cut(s) 676
Bse8I GATNNNNATC 1 cut(s) 384
BseAI TCCGGA 1 cut(s) 8
BseBI CCWGG 6 cut(s) 101, 155, 1032, 1062, 1176, 1329
BseCI ATCGAT 1 cut(s) 1596
BseDI CCNNGG 6 cut(s) 31, 39, 135, 153, 1327, 1328
BseGI GGATG 4 cut(s) 781, 1495, 1578, 1664
BseJI GATNNNNATC 1 cut(s) 384
BseRI GAGGAG 4 cut(s) 97, 1104, 1635, 1638
BseXI GCAGC 4 cut(s) 105, 190, 994, 1252
BseYI CCCAGC 2 cut(s) 130, 1304
BsgI GTGCAG 3 cut(s) 977, 1001, 1302
Bsh1236I CGCG 1 cut(s) 56
BshFI GGCC 5 cut(s) 25, 213, 997, 1309, 1587
BshNI GGYRCC 4 cut(s) 682, 697, 850, 1387
BshVI ATCGAT 1 cut(s) 1596
BsiHKAI GWGCWC 1 cut(s) 1279
BsiHKCI CYCGRG 1 cut(s) 31
BsiSI CCGG 3 cut(s) 9, 32, 677
BsmAI GTCTC 4 cut(s) 426, 465, 485, 1115
BsnI GGCC 5 cut(s) 25, 213, 997, 1309, 1587
BsoBI CYCGRG 1 cut(s) 31
Bsp1286I GDGCHC 3 cut(s) 38, 1279, 1645
Bsp13I TCCGGA 1 cut(s) 8
Bsp1407I TGTACA 2 cut(s) 192, 1627
Bsp143I GATC 8 cut(s) 11, 182, 391, 462, 533, 808, 1257, 1546
Bsp19I CCATGG 1 cut(s) 135
BspACI CCGC 3 cut(s) 827, 1215, 1478
BspANI GGCC 5 cut(s) 25, 213, 997, 1309, 1587
BspDI ATCGAT 1 cut(s) 1596
BspEI TCCGGA 1 cut(s) 8
BspFNI CGCG 1 cut(s) 56
BspLI GGNNCC 9 cut(s) 37, 142, 684, 699, 810, 852, 998, 1389, 1644
BspMI ACCTGC 1 cut(s) 943
BspPI GGATC 5 cut(s) 19, 457, 541, 803, 816
BspT107I GGYRCC 4 cut(s) 682, 697, 850, 1387
BsrFI RCCGGY 1 cut(s) 676
BsrGI TGTACA 2 cut(s) 192, 1627
BssAI RCCGGY 1 cut(s) 676
BssECI CCNNGG 6 cut(s) 31, 39, 135, 153, 1327, 1328
BssMI GATC 8 cut(s) 11, 182, 391, 462, 533, 808, 1257, 1546
BssNI GRCGYC 2 cut(s) 5, 698
BssT1I CCWWGG 2 cut(s) 39, 135
Bst2UI CCWGG 6 cut(s) 101, 155, 1032, 1062, 1176, 1329
Bst4CI ACNGT 4 cut(s) 253, 327, 897, 1400
BstACI GRCGYC 2 cut(s) 5, 698
BstAUI TGTACA 2 cut(s) 192, 1627
BstC8I GCNNGC 4 cut(s) 215, 522, 861, 1139
BstDSI CCRYGG 1 cut(s) 135
BstENI CCTNNNNNAGG 1 cut(s) 1653
BstF5I GGATG 4 cut(s) 781, 1495, 1578, 1664
BstFNI CGCG 1 cut(s) 56
BstH2I RGCGCY 1 cut(s) 701
BstHHI GCGC 2 cut(s) 294, 700
BstKTI GATC 8 cut(s) 14, 185, 394, 465, 536, 811, 1260, 1549
BstMAI GTCTC 4 cut(s) 426, 465, 485, 1115
BstMBI GATC 8 cut(s) 11, 182, 391, 462, 533, 808, 1257, 1546
BstMWI GCNNNNNNNGC 4 cut(s) 42, 979, 1240, 1274
BstNI CCWGG 6 cut(s) 101, 155, 1032, 1062, 1176, 1329
BstNSI RCATGY 1 cut(s) 1141
BstSCI CCNGG 8 cut(s) 30, 31, 99, 153, 1030, 1060, 1174, 1327
BstUI CGCG 1 cut(s) 56
BstV1I GCAGC 4 cut(s) 105, 190, 994, 1252
BstV2I GAAGAC 3 cut(s) 90, 228, 608
BstX2I RGATCY 3 cut(s) 462, 533, 808
BstYI RGATCY 3 cut(s) 462, 533, 808
Bsu15I ATCGAT 1 cut(s) 1596
BsuI GTATCC 2 cut(s) 918, 972
BsuRI GGCC 5 cut(s) 25, 213, 997, 1309, 1587
BsuTUI ATCGAT 1 cut(s) 1596
BtgI CCRYGG 1 cut(s) 135
BtsCI GGATG 4 cut(s) 781, 1495, 1578, 1664
BveI ACCTGC 1 cut(s) 943
Cac8I GCNNGC 4 cut(s) 215, 522, 861, 1139
CaiI CAGNNNCTG 1 cut(s) 466
CfoI GCGC 2 cut(s) 294, 700
Cfr10I RCCGGY 1 cut(s) 676
Cfr13I GGNCC 3 cut(s) 24, 996, 1307
Cfr9I CCCGGG 1 cut(s) 31
ClaI ATCGAT 1 cut(s) 1596
CseI GACGC 1 cut(s) 45
CsiI ACCWGGT 3 cut(s) 1030, 1060, 1174
Csp6I GTAC 4 cut(s) 193, 1015, 1335, 1628
CviAII CATG 8 cut(s) 136, 265, 289, 395, 1138, 1198, 1531, 1550
CviQI GTAC 4 cut(s) 193, 1015, 1335, 1628
DinI GGCGCC 1 cut(s) 699
DpnI GATC 8 cut(s) 13, 184, 393, 464, 535, 810, 1259, 1548
DpnII GATC 8 cut(s) 11, 182, 391, 462, 533, 808, 1257, 1546
DraI TTTAAA 1 cut(s) 384
EaeI YGGCCR 2 cut(s) 211, 1585
Ecl136II GAGCTC 1 cut(s) 1277
Eco130I CCWWGG 2 cut(s) 39, 135
Eco24I GRGCYC 3 cut(s) 38, 1279, 1645
Eco32I GATATC 1 cut(s) 1412
Eco53kI GAGCTC 1 cut(s) 1277
Eco57I CTGAAG 2 cut(s) 240, 500
Eco88I CYCGRG 1 cut(s) 31
EcoICRI GAGCTC 1 cut(s) 1277
EcoNI CCTNNNNNAGG 1 cut(s) 1653
EcoO109I RGGNCCY 1 cut(s) 996
EcoRII CCWGG 6 cut(s) 99, 153, 1030, 1060, 1174, 1327
EcoRV GATATC 1 cut(s) 1412
EcoT14I CCWWGG 2 cut(s) 39, 135
EcoT38I GRGCYC 3 cut(s) 38, 1279, 1645
EgeI GGCGCC 1 cut(s) 699
EheI GGCGCC 1 cut(s) 699
ErhI CCWWGG 2 cut(s) 39, 135
FaeI CATG 8 cut(s) 139, 268, 292, 398, 1141, 1201, 1534, 1553
FatI CATG 8 cut(s) 135, 264, 288, 394, 1137, 1197, 1530, 1549
FauI CCCGC 1 cut(s) 834
FauNDI CATATG 1 cut(s) 1464
FbaI TGATCA 2 cut(s) 391, 1546
Fnu4HI GCNGC 4 cut(s) 94, 204, 983, 1241
FokI GGATG 3 cut(s) 768, 1482, 1585
FriOI GRGCYC 3 cut(s) 38, 1279, 1645
Fsp4HI GCNGC 4 cut(s) 94, 204, 983, 1241
FspBI CTAG 1 cut(s) 843
GlaI GCGC 2 cut(s) 293, 699
GluI GCNGC 4 cut(s) 94, 204, 983, 1241
GsaI CCCAGC 2 cut(s) 134, 1308
GsuI CTGGAG 2 cut(s) 1101, 1401
HaeII RGCGCY 1 cut(s) 701
HaeIII GGCC 5 cut(s) 25, 213, 997, 1309, 1587
HapII CCGG 3 cut(s) 9, 32, 677
HgaI GACGC 1 cut(s) 45
HhaI GCGC 2 cut(s) 294, 700
Hin1I GRCGYC 2 cut(s) 5, 698
Hin1II CATG 8 cut(s) 139, 268, 292, 398, 1141, 1201, 1534, 1553
Hin6I GCGC 2 cut(s) 292, 698
HinP1I GCGC 2 cut(s) 292, 698
HincII GTYRAC 3 cut(s) 1037, 1067, 1097
HindII GTYRAC 3 cut(s) 1037, 1067, 1097
HindIII AAGCTT 1 cut(s) 512
HinfI GANTC 8 cut(s) 104, 224, 407, 493, 790, 1123, 1435, 1474
HpaII CCGG 3 cut(s) 9, 32, 677
HphI GGTGA 7 cut(s) 177, 377, 570, 1298, 1304, 1537, 1556
Hpy166II GTNNAC 7 cut(s) 195, 314, 1015, 1037, 1067, 1097, 1528
Hpy188III TCNNGA 7 cut(s) 9, 389, 425, 460, 466, 1118, 1567
Hpy8I GTNNAC 7 cut(s) 195, 314, 1015, 1037, 1067, 1097, 1528
Hpy99I CGWCG 1 cut(s) 19
HpyAV CCTTC 2 cut(s) 296, 1352
HpyCH4III ACNGT 4 cut(s) 253, 327, 897, 1400
HpyCH4V TGCA 9 cut(s) 439, 524, 835, 958, 982, 1147, 1319, 1427, 1556
HpyF10VI GCNNNNNNNGC 4 cut(s) 42, 979, 1240, 1274
Hsp92I GRCGYC 2 cut(s) 5, 698
Hsp92II CATG 8 cut(s) 139, 268, 292, 398, 1141, 1201, 1534, 1553
HspAI GCGC 2 cut(s) 292, 698
KasI GGCGCC 1 cut(s) 697
Kpn2I TCCGGA 1 cut(s) 8
Ksp22I TGATCA 2 cut(s) 391, 1546
Kzo9I GATC 8 cut(s) 11, 182, 391, 462, 533, 808, 1257, 1546
LmnI GCTCC 6 cut(s) 41, 80, 1217, 1274, 1459, 1648
Lsp1109I GCAGC 4 cut(s) 105, 190, 994, 1252
LweI GCATC 5 cut(s) 360, 790, 1183, 1279, 1436
MabI ACCWGGT 3 cut(s) 1030, 1060, 1174
MaeI CTAG 1 cut(s) 843
MaeIII GTNAC 3 cut(s) 321, 712, 1490
MalI GATC 8 cut(s) 13, 184, 393, 464, 535, 810, 1259, 1548
MboI GATC 8 cut(s) 11, 182, 391, 462, 533, 808, 1257, 1546
MboII GAAGA 5 cut(s) 95, 233, 528, 531, 613
MflI RGATCY 3 cut(s) 462, 533, 808
MhlI GDGCHC 3 cut(s) 38, 1279, 1645
MlsI TGGCCA 2 cut(s) 213, 1587
MluCI AATT 9 cut(s) 145, 243, 306, 332, 503, 632, 917, 929, 1481
MluNI TGGCCA 2 cut(s) 213, 1587
Mly113I GGCGCC 1 cut(s) 698
MlyI GAGTC 6 cut(s) 98, 218, 487, 799, 1117, 1429
MmeI TCCRAC 2 cut(s) 309, 916
Mox20I TGGCCA 2 cut(s) 213, 1587
MroI TCCGGA 1 cut(s) 8
MroXI GAANNNNTTC 2 cut(s) 145, 310
MscI TGGCCA 2 cut(s) 213, 1587
MseI TTAA 2 cut(s) 383, 1602
MslI CAYNNNNRTG 1 cut(s) 1142
Msp20I TGGCCA 2 cut(s) 213, 1587
MspI CCGG 3 cut(s) 9, 32, 677
MspR9I CCNGG 8 cut(s) 32, 33, 101, 155, 1032, 1062, 1176, 1329
MvaI CCWGG 6 cut(s) 101, 155, 1032, 1062, 1176, 1329
MvnI CGCG 1 cut(s) 56
MwoI GCNNNNNNNGC 4 cut(s) 42, 979, 1240, 1274
NarI GGCGCC 1 cut(s) 698
NciI CCSGG 2 cut(s) 32, 33
NcoI CCATGG 1 cut(s) 135
NdeI CATATG 1 cut(s) 1464
NdeII GATC 8 cut(s) 11, 182, 391, 462, 533, 808, 1257, 1546
NlaIII CATG 8 cut(s) 139, 268, 292, 398, 1141, 1201, 1534, 1553
NlaIV GGNNCC 9 cut(s) 37, 142, 684, 699, 810, 852, 998, 1389, 1644
NmuCI GTSAC 2 cut(s) 321, 712
NspI RCATGY 1 cut(s) 1141
PaeI GCATGC 1 cut(s) 1141
PaqCI CACCTGC 1 cut(s) 943
PasI CCCWGGG 1 cut(s) 1328
PcsI WCGNNNNNNNCGW 1 cut(s) 60
PdmI GAANNNNTTC 2 cut(s) 145, 310
PfeI GAWTC 2 cut(s) 407, 1474
PflMI CCANNNNNTGG 1 cut(s) 1573
PkrI GCNGC 4 cut(s) 95, 205, 984, 1242
PleI GAGTC 6 cut(s) 98, 218, 487, 798, 1117, 1429
PluTI GGCGCC 1 cut(s) 701
PpsI GAGTC 6 cut(s) 98, 218, 487, 798, 1117, 1429
Psp124BI GAGCTC 1 cut(s) 1279
Psp6I CCWGG 6 cut(s) 99, 153, 1030, 1060, 1174, 1327
PspFI CCCAGC 2 cut(s) 130, 1304
PspGI CCWGG 6 cut(s) 99, 153, 1030, 1060, 1174, 1327
PspN4I GGNNCC 9 cut(s) 37, 142, 684, 699, 810, 852, 998, 1389, 1644
PspPI GGNCC 3 cut(s) 24, 996, 1307
PsrI GAACNNNNNNTAC 4 cut(s) 1037, 1067, 1069, 1099
PstNI CAGNNNCTG 1 cut(s) 466
PsuI RGATCY 3 cut(s) 462, 533, 808
RsaI GTAC 4 cut(s) 194, 1016, 1336, 1629
RsaNI GTAC 4 cut(s) 193, 1015, 1335, 1628
RseI CAYNNNNRTG 1 cut(s) 1142
SacI GAGCTC 1 cut(s) 1279
SaqAI TTAA 2 cut(s) 383, 1602
SatI GCNGC 4 cut(s) 94, 204, 983, 1241
Sau3AI GATC 8 cut(s) 11, 182, 391, 462, 533, 808, 1257, 1546
Sau96I GGNCC 3 cut(s) 24, 996, 1307
SchI GAGTC 6 cut(s) 98, 218, 487, 799, 1117, 1429
ScrFI CCNGG 8 cut(s) 32, 33, 101, 155, 1032, 1062, 1176, 1329
SduI GDGCHC 3 cut(s) 38, 1279, 1645
SexAI ACCWGGT 3 cut(s) 1030, 1060, 1174
SfaNI GCATC 5 cut(s) 360, 790, 1183, 1279, 1436
SfoI GGCGCC 1 cut(s) 699
SmaI CCCGGG 1 cut(s) 33
SmiI ATTTAAAT 1 cut(s) 384
SmiMI CAYNNNNRTG 1 cut(s) 1142
SmlI CTYRAG 3 cut(s) 416, 425, 870
SmoI CTYRAG 3 cut(s) 416, 425, 870
SphI GCATGC 1 cut(s) 1141
Sse9I AATT 9 cut(s) 145, 243, 306, 332, 503, 632, 917, 929, 1481
SsiI CCGC 3 cut(s) 827, 1215, 1478
SspDI GGCGCC 1 cut(s) 697
SspI AATATT 1 cut(s) 797
SspMI CTAG 1 cut(s) 843
SstI GAGCTC 1 cut(s) 1279
StyD4I CCNGG 8 cut(s) 30, 31, 99, 153, 1030, 1060, 1174, 1327
StyI CCWWGG 2 cut(s) 39, 135
SwaI ATTTAAAT 1 cut(s) 384
TaaI ACNGT 4 cut(s) 253, 327, 897, 1400
TaqI TCGA 3 cut(s) 820, 1160, 1596
TasI AATT 9 cut(s) 145, 243, 306, 332, 503, 632, 917, 929, 1481
TatI WGTACW 3 cut(s) 192, 1334, 1627
TfiI GAWTC 2 cut(s) 407, 1474
Tru1I TTAA 2 cut(s) 383, 1602
Tru9I TTAA 2 cut(s) 383, 1602
TseFI GTSAC 2 cut(s) 321, 712
TseI GCWGC 4 cut(s) 93, 203, 982, 1240
Tsp45I GTSAC 2 cut(s) 321, 712
TspDTI ATGAA 4 cut(s) 281, 531, 1474, 1623
TspMI CCCGGG 1 cut(s) 31
Van91I CCANNNNNTGG 1 cut(s) 1573
XagI CCTNNNNNAGG 1 cut(s) 1653
XceI RCATGY 1 cut(s) 1141
XmaI CCCGGG 1 cut(s) 31
XmnI GAANNNNTTC 2 cut(s) 145, 310
XspI CTAG 1 cut(s) 843
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.