MD17G1240400.v1.1

UBA-like domain (DUF1421)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr17
OG0010117
Physical Location & Seq
Reverse (-)
28971995 .. 28975395
3401 bp
Loading structure...
UTR
Exon/CDS
Intron
MD17G1240400.v1.1.491

Sequence Viewer

Length: 1566 bp
ATGGCGTCTGGATCATCGGCTCGGGGCAACCCGGGCTCACAGGGATTCGATTTCGGGTCGGACGACATTCTCTGCTCCTACGAGGACTACGGCAACCAGGACTCCTCCAATGGCAACCACAGTGAACCTGTCATGGGGAATAATTCCGGGAAGGATTTTCAGAGAAGTAGAATGTCAAGACAACCGATGTTCTCTTCTCCTGCCTATAGCCAGCCGGAAGAATCTCTTCATCAAGATGTAACTGCTACTGTTGAAAAGAGCATGAAAAAATATGCTGACAATCTCATGAGATTTCTTGAAGGAATTAGTTCACGGCTTTCGCAGCTGGAATTGTATTGCTACAATGTTGACAAGTCAATTGGTGAGATGCGATCTGATTTAGGTCGTGATCATGAAGAAGCAGAGTCAAAGCTCAAGTCTCTTGAGAAACATCTTCAAGAAGTCCATAGGTCTGTCCAGATCATAAGGGACAAGCAAGAACTTGCGGAGACTCAGAAAGAACTAGCTAAGCTTCAGCTTGCACAGAAAGGATCTGCATCTTCAACCCATTCCCAATCCAATGAGGACAGAGCTTCACCACCCACCTCTGATGCTCAGAAAGCTGACCACCCATCTGAAACACATAACCAGCAATTGGCTTTAGCCCTGCCACATCAAGTGGCGCCACAGCAGCAGCCTGTGGCACCTCCCACACAGCCCCCTCCACAGAATGTGACTCCACAACAATCCTATTATTTACCAACCCAGTTACAAAATCCACCACCTCAGGCACAACATCCGCAGAATCAATATTTGCCTCCTGATTCTCAGTATCGAAGCCCCCAAGTGCAAGAAATGCCAAGGGTGACACCACGGCCAACACAATCGCAAGTGAATCAGACACAAGTCCAGTCGTTCCCTCCGTATTCGCAACAATTACCGCAGAGTCAGGTGCAATTTCCACAACAGTCCTCTATGCAACCCCAGATGAGGCCACCATCAACAAATGTCTACCCTTATCCACCTAGTCAACAAACAAACCCATCTCCTCCAGAGTCTGTACCAAACAGCATGCCGATGCCAGTGCCATATTCCAACATTCCTCAACCAGGGCCGGGTCGTTCTGATCCCATGCCTTTTGGATATGGTGGAGCTGGTCGAACAATGCAGCAGCAGCCTCCACCTCAGCAAATCAAGGGGGCTTTTGGTGCTCAACCAGGTGAGGGATATGGGGCTGCTGGTCCTCACCCTGCACTTCCTCCAGGGAGTACTTATATGGTCTACGACAGTGAAGGGGGTAGAACTCAATATTCTGCTCATTATGGATATCCTCCTACAAGCATCTCTCATCATACACCACAGCCAACAACAGCTCCAAATCTTATGGCTCGGAATCAACAATTCCCACCTAATCACCCTTACAATGAGTTGATTGAGAAATTGGTACCCATGGGGTTCAGGGGCGATCACGTTGCAAGTGTGATTCAAAGGATGGAGGAAAGTGGCCAACCCATTGATTTTAATGCCGTGATTGACAGGTTGAATTCACATCCATCTGGGGGTCCTCAGAGAGGATGGTCAGGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1421

Protein Analysis

522

Amino Acids

57.45

Weight (kDa)

6.01

Isoelectric Point (pI)

67.77

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF1421 PF07223 467 - 510 1.4e-22 UBA-like domain (DUF1421)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1423
AccB1I GGYRCC 3 cut(s) 661, 682, 1423
AccB7I CCANNNNNTGG 1 cut(s) 634
AccI GTMKAC 2 cut(s) 990, 1260
AciI CCGC 3 cut(s) 485, 779, 920
AclWI GGATC 3 cut(s) 19, 538, 1100
AcoI YGGCCR 2 cut(s) 854, 1483
AcsI RAATTY 1 cut(s) 1522
AcuI CTGAAG 1 cut(s) 497
AcyI GRCGYC 2 cut(s) 5, 662
AfaI GTAC 3 cut(s) 1041, 1249, 1425
AfiI CCNNNNNNNGG 8 cut(s) 134, 634, 969, 1088, 1094, 1202, 1538, 1550
AgsI TTSAA 6 cut(s) 254, 299, 437, 543, 1466, 1522
AjnI CCWGG 4 cut(s) 96, 1087, 1195, 1240
AluBI AGCT 9 cut(s) 325, 412, 506, 511, 517, 572, 602, 1133, 1352
AluI AGCT 9 cut(s) 325, 412, 506, 511, 517, 572, 602, 1133, 1352
Alw21I GWGCWC 1 cut(s) 1192
Alw26I GTCTC 2 cut(s) 423, 482
AlwI GGATC 3 cut(s) 19, 538, 1100
AlwNI CAGNNNCTG 1 cut(s) 1037
Ama87I CYCGRG 2 cut(s) 21, 31
AoxI GGCC 4 cut(s) 854, 971, 1091, 1483
ApeKI GCWGC 7 cut(s) 322, 670, 673, 1147, 1150, 1153, 1214
ApoI RAATTY 1 cut(s) 1522
ArsI GACNNNNNNTTYG 2 cut(s) 401, 433
Asp700I GAANNNNTTC 2 cut(s) 225, 307
Asp718I GGTACC 1 cut(s) 1423
AspLEI GCGC 1 cut(s) 664
AspS9I GGNCC 3 cut(s) 1091, 1220, 1541
AsuC2I CCSGG 4 cut(s) 32, 33, 148, 1095
AsuHPI GGTGA 6 cut(s) 374, 567, 856, 1211, 1217, 1385
AvaI CYCGRG 2 cut(s) 21, 31
AvaII GGWCC 2 cut(s) 1220, 1541
AxyI CCTNAGG 1 cut(s) 765
BalI TGGCCA 1 cut(s) 1485
BanI GGYRCC 3 cut(s) 661, 682, 1423
BanII GRGCYC 1 cut(s) 38
Bbv12I GWGCWC 1 cut(s) 1192
BbvCI CCTCAGC 1 cut(s) 1164
BbvI GCAGC 7 cut(s) 334, 682, 685, 1159, 1162, 1165, 1201
BccI CCATC 6 cut(s) 619, 985, 1030, 1465, 1540, 1548
BceAI ACGGC 4 cut(s) 106, 329, 869, 1490
BcgI CGANNNNNNTGC 4 cut(s) 1045, 1079, 1433, 1467
BciT130I CCWGG 4 cut(s) 98, 1089, 1197, 1242
BclI TGATCA 1 cut(s) 388
BcnI CCSGG 4 cut(s) 32, 33, 148, 1095
BcoDI GTCTC 2 cut(s) 423, 482
BfaI CTAG 2 cut(s) 503, 1005
BfmI CTRYAG 1 cut(s) 205
BfoI RGCGCY 1 cut(s) 665
BisI GCNGC 7 cut(s) 323, 671, 674, 1148, 1151, 1154, 1215
BlpI GCTNAGC 1 cut(s) 507
BlsI GCNGC 7 cut(s) 324, 672, 675, 1149, 1152, 1155, 1216
BmcAI AGTACT 1 cut(s) 1249
Bme1390I CCNGG 8 cut(s) 32, 33, 98, 148, 1089, 1095, 1197, 1242
Bme18I GGWCC 2 cut(s) 1220, 1541
BmeT110I CYCGRG 2 cut(s) 21, 31
BmgT120I GGNCC 3 cut(s) 1091, 1220, 1541
BmiI GGNNCC 4 cut(s) 663, 684, 1425, 1542
BmrFI CCNGG 8 cut(s) 32, 33, 98, 148, 1089, 1095, 1197, 1242
BmrI ACTGGG 1 cut(s) 739
BmsI GCATC 5 cut(s) 357, 545, 580, 1047, 1329
BmuI ACTGGG 1 cut(s) 739
BoxI GACNNNNGTC 1 cut(s) 884
BpmI CTGGAG 2 cut(s) 1014, 1224
Bpu10I CCTNAGC 1 cut(s) 1164
Bpu1102I GCTNAGC 1 cut(s) 507
BpuEI CTTGAG 2 cut(s) 398, 443
BpuMI CCSGG 4 cut(s) 32, 33, 148, 1095
BsaBI GATNNNNATC 1 cut(s) 535
BsaHI GRCGYC 2 cut(s) 5, 662
BsaJI CCNNGG 6 cut(s) 31, 839, 851, 1088, 1241, 1428
BsaXI ACNNNNNCTCC 4 cut(s) 86, 116, 1336, 1366
Bsc4I CCNNNNNNNGG 8 cut(s) 134, 634, 969, 1088, 1094, 1202, 1538, 1550
Bse1I ACTGG 3 cut(s) 745, 889, 1061
Bse21I CCTNAGG 1 cut(s) 765
Bse8I GATNNNNATC 1 cut(s) 535
BseBI CCWGG 4 cut(s) 98, 1089, 1197, 1242
BseDI CCNNGG 6 cut(s) 31, 839, 851, 1088, 1241, 1428
BseGI GGATG 4 cut(s) 775, 1476, 1528, 1559
BseJI GATNNNNATC 1 cut(s) 535
BseLI CCNNNNNNNGG 8 cut(s) 134, 634, 969, 1088, 1094, 1202, 1538, 1550
BseMII CTCAG 6 cut(s) 506, 608, 779, 821, 1178, 1559
BseNI ACTGG 3 cut(s) 745, 889, 1061
BseRI GAGGAG 2 cut(s) 94, 1017
BseXI GCAGC 7 cut(s) 334, 682, 685, 1159, 1162, 1165, 1201
BsgI GTGCAG 1 cut(s) 1215
BshFI GGCC 4 cut(s) 856, 973, 1093, 1485
BshNI GGYRCC 3 cut(s) 661, 682, 1423
BsiHKAI GWGCWC 1 cut(s) 1192
BsiHKCI CYCGRG 2 cut(s) 21, 31
BsiSI CCGG 4 cut(s) 32, 147, 215, 1094
BslFI GGGAC 1 cut(s) 482
BslI CCNNNNNNNGG 8 cut(s) 134, 634, 969, 1088, 1094, 1202, 1538, 1550
BsmAI GTCTC 2 cut(s) 423, 482
BsmFI GGGAC 1 cut(s) 482
BsnI GGCC 4 cut(s) 856, 973, 1093, 1485
BsoBI CYCGRG 2 cut(s) 21, 31
Bsp1286I GDGCHC 2 cut(s) 38, 1192
Bsp143I GATC 7 cut(s) 11, 371, 388, 459, 530, 1105, 1444
Bsp1720I GCTNAGC 1 cut(s) 507
Bsp19I CCATGG 1 cut(s) 1428
BspACI CCGC 3 cut(s) 485, 779, 920
BspANI GGCC 4 cut(s) 856, 973, 1093, 1485
BspCNI CTCAG 6 cut(s) 505, 607, 778, 820, 1177, 1558
BspHI TCATGA 2 cut(s) 285, 391
BspLI GGNNCC 4 cut(s) 663, 684, 1425, 1542
BspPI GGATC 3 cut(s) 19, 538, 1100
BspT107I GGYRCC 3 cut(s) 661, 682, 1423
BsrI ACTGG 3 cut(s) 745, 889, 1061
BssECI CCNNGG 6 cut(s) 31, 839, 851, 1088, 1241, 1428
BssMI GATC 7 cut(s) 11, 371, 388, 459, 530, 1105, 1444
BssNI GRCGYC 2 cut(s) 5, 662
BssT1I CCWWGG 2 cut(s) 839, 1428
Bst2UI CCWGG 4 cut(s) 98, 1089, 1197, 1242
Bst4CI ACNGT 4 cut(s) 122, 250, 948, 1268
Bst6I CTCTTC 2 cut(s) 199, 231
BstACI GRCGYC 2 cut(s) 5, 662
BstAPI GCANNNNNTGC 1 cut(s) 835
BstC8I GCNNGC 3 cut(s) 212, 519, 1052
BstDEI CTNAG 7 cut(s) 492, 507, 594, 765, 807, 1164, 1545
BstDSI CCRYGG 2 cut(s) 851, 1428
BstENI CCTNNNNNAGG 2 cut(s) 1086, 1548
BstF5I GGATG 4 cut(s) 775, 1476, 1528, 1559
BstH2I RGCGCY 1 cut(s) 665
BstHHI GCGC 1 cut(s) 664
BstKTI GATC 7 cut(s) 14, 374, 391, 462, 533, 1108, 1447
BstMAI GTCTC 2 cut(s) 423, 482
BstMBI GATC 7 cut(s) 11, 371, 388, 459, 530, 1105, 1444
BstMWI GCNNNNNNNGC 7 cut(s) 33, 322, 599, 670, 835, 1153, 1187
BstNI CCWGG 4 cut(s) 98, 1089, 1197, 1242
BstNSI RCATGY 1 cut(s) 1054
BstPAI GACNNNNGTC 1 cut(s) 884
BstSCI CCNGG 8 cut(s) 30, 31, 96, 146, 1087, 1093, 1195, 1240
BstSFI CTRYAG 1 cut(s) 205
BstV1I GCAGC 7 cut(s) 334, 682, 685, 1159, 1162, 1165, 1201
BstX2I RGATCY 1 cut(s) 530
BstYI RGATCY 1 cut(s) 530
Bsu36I CCTNAGG 1 cut(s) 765
BsuRI GGCC 4 cut(s) 856, 973, 1093, 1485
BtgI CCRYGG 2 cut(s) 851, 1428
BtsCI GGATG 4 cut(s) 775, 1476, 1528, 1559
BtsIMutI CAGTG 3 cut(s) 127, 1068, 1273
Cac8I GCNNGC 3 cut(s) 212, 519, 1052
CaiI CAGNNNCTG 1 cut(s) 1037
CciI TCATGA 2 cut(s) 285, 391
CfoI GCGC 1 cut(s) 664
Cfr13I GGNCC 3 cut(s) 1091, 1220, 1541
Cfr9I CCCGGG 1 cut(s) 31
CsiI ACCWGGT 1 cut(s) 1195
Csp6I GTAC 3 cut(s) 1040, 1248, 1424
CviAII CATG 7 cut(s) 133, 262, 286, 392, 1051, 1111, 1429
CviQI GTAC 3 cut(s) 1040, 1248, 1424
DdeI CTNAG 7 cut(s) 492, 507, 594, 765, 807, 1164, 1545
DinI GGCGCC 1 cut(s) 663
DpnI GATC 7 cut(s) 13, 373, 390, 461, 532, 1107, 1446
DpnII GATC 7 cut(s) 11, 371, 388, 459, 530, 1105, 1444
EaeI YGGCCR 2 cut(s) 854, 1483
Eam1104I CTCTTC 2 cut(s) 199, 231
EarI CTCTTC 2 cut(s) 199, 231
Eco130I CCWWGG 2 cut(s) 839, 1428
Eco24I GRGCYC 1 cut(s) 38
Eco32I GATATC 1 cut(s) 1307
Eco47I GGWCC 2 cut(s) 1220, 1541
Eco57I CTGAAG 1 cut(s) 497
Eco81I CCTNAGG 1 cut(s) 765
Eco88I CYCGRG 2 cut(s) 21, 31
EcoNI CCTNNNNNAGG 2 cut(s) 1086, 1548
EcoO109I RGGNCCY 1 cut(s) 1541
EcoRI GAATTC 1 cut(s) 1522
EcoRII CCWGG 4 cut(s) 96, 1087, 1195, 1240
EcoRV GATATC 1 cut(s) 1307
EcoT14I CCWWGG 2 cut(s) 839, 1428
EcoT38I GRGCYC 1 cut(s) 38
EgeI GGCGCC 1 cut(s) 663
EheI GGCGCC 1 cut(s) 663
ErhI CCWWGG 2 cut(s) 839, 1428
FaeI CATG 7 cut(s) 136, 265, 289, 395, 1054, 1114, 1432
FalI AAGNNNNNCTT 2 cut(s) 210, 242
FaqI GGGAC 1 cut(s) 482
FatI CATG 7 cut(s) 132, 261, 285, 391, 1050, 1110, 1428
FbaI TGATCA 1 cut(s) 388
FblI GTMKAC 2 cut(s) 990, 1260
Fnu4HI GCNGC 7 cut(s) 323, 671, 674, 1148, 1151, 1154, 1215
FokI GGATG 3 cut(s) 762, 1483, 1515
FriOI GRGCYC 1 cut(s) 38
Fsp4HI GCNGC 7 cut(s) 323, 671, 674, 1148, 1151, 1154, 1215
FspBI CTAG 2 cut(s) 503, 1005
GlaI GCGC 1 cut(s) 663
GluI GCNGC 7 cut(s) 323, 671, 674, 1148, 1151, 1154, 1215
GsuI CTGGAG 2 cut(s) 1014, 1224
HaeII RGCGCY 1 cut(s) 665
HaeIII GGCC 4 cut(s) 856, 973, 1093, 1485
HapII CCGG 4 cut(s) 32, 147, 215, 1094
HhaI GCGC 1 cut(s) 664
Hin1I GRCGYC 2 cut(s) 5, 662
Hin1II CATG 7 cut(s) 136, 265, 289, 395, 1054, 1114, 1432
Hin6I GCGC 1 cut(s) 662
HinP1I GCGC 1 cut(s) 662
HincII GTYRAC 2 cut(s) 349, 1010
HindII GTYRAC 2 cut(s) 349, 1010
HindIII AAGCTT 1 cut(s) 509
HpaII CCGG 4 cut(s) 32, 147, 215, 1094
HphI GGTGA 6 cut(s) 374, 567, 856, 1211, 1217, 1385
Hpy166II GTNNAC 6 cut(s) 125, 311, 349, 991, 1010, 1261
Hpy8I GTNNAC 6 cut(s) 125, 311, 349, 991, 1010, 1261
HpyAV CCTTC 3 cut(s) 145, 293, 1265
HpyCH4III ACNGT 4 cut(s) 122, 250, 948, 1268
HpyCH4IV ACGT 1 cut(s) 1449
HpyCH4V TGCA 8 cut(s) 521, 536, 829, 934, 958, 1147, 1232, 1454
HpyF10VI GCNNNNNNNGC 7 cut(s) 33, 322, 599, 670, 835, 1153, 1187
HpyF3I CTNAG 7 cut(s) 492, 507, 594, 765, 807, 1164, 1545
HpySE526I ACGT 1 cut(s) 1449
Hsp92I GRCGYC 2 cut(s) 5, 662
Hsp92II CATG 7 cut(s) 136, 265, 289, 395, 1054, 1114, 1432
HspAI GCGC 1 cut(s) 662
KasI GGCGCC 1 cut(s) 661
KpnI GGTACC 1 cut(s) 1427
Ksp22I TGATCA 1 cut(s) 388
Kzo9I GATC 7 cut(s) 11, 371, 388, 459, 530, 1105, 1444
LmnI GCTCC 3 cut(s) 80, 1130, 1357
Lsp1109I GCAGC 7 cut(s) 334, 682, 685, 1159, 1162, 1165, 1201
LweI GCATC 5 cut(s) 357, 545, 580, 1047, 1329
MabI ACCWGGT 1 cut(s) 1195
MaeI CTAG 2 cut(s) 503, 1005
MaeII ACGT 1 cut(s) 1449
MaeIII GTNAC 4 cut(s) 238, 712, 747, 844
MalI GATC 7 cut(s) 13, 373, 390, 461, 532, 1107, 1446
MboI GATC 7 cut(s) 11, 371, 388, 459, 530, 1105, 1444
MboII GAAGA 6 cut(s) 186, 218, 230, 407, 425, 531
MfeI CAATTG 2 cut(s) 357, 632
MflI RGATCY 1 cut(s) 530
MhlI GDGCHC 2 cut(s) 38, 1192
MlsI TGGCCA 1 cut(s) 1485
MluNI TGGCCA 1 cut(s) 1485
Mly113I GGCGCC 1 cut(s) 662
MlyI GAGTC 6 cut(s) 95, 413, 484, 709, 934, 1043
MmeI TCCRAC 2 cut(s) 39, 1098
Mox20I TGGCCA 1 cut(s) 1485
MroXI GAANNNNTTC 2 cut(s) 225, 307
MscI TGGCCA 1 cut(s) 1485
MseI TTAA 1 cut(s) 1500
MslI CAYNNNNRTG 2 cut(s) 234, 1055
Msp20I TGGCCA 1 cut(s) 1485
MspA1I CMGCKG 1 cut(s) 325
MspI CCGG 4 cut(s) 32, 147, 215, 1094
MspR9I CCNGG 8 cut(s) 32, 33, 98, 148, 1089, 1095, 1197, 1242
MunI CAATTG 2 cut(s) 357, 632
MvaI CCWGG 4 cut(s) 98, 1089, 1197, 1242
MwoI GCNNNNNNNGC 7 cut(s) 33, 322, 599, 670, 835, 1153, 1187
NarI GGCGCC 1 cut(s) 662
NciI CCSGG 4 cut(s) 32, 33, 148, 1095
NcoI CCATGG 1 cut(s) 1428
NdeII GATC 7 cut(s) 11, 371, 388, 459, 530, 1105, 1444
NlaIII CATG 7 cut(s) 136, 265, 289, 395, 1054, 1114, 1432
NlaIV GGNNCC 4 cut(s) 663, 684, 1425, 1542
NmuCI GTSAC 2 cut(s) 712, 844
NspI RCATGY 1 cut(s) 1054
PaeI GCATGC 1 cut(s) 1054
PagI TCATGA 2 cut(s) 285, 391
PcsI WCGNNNNNNNCGW 2 cut(s) 60, 899
PdmI GAANNNNTTC 2 cut(s) 225, 307
PfeI GAWTC 7 cut(s) 45, 221, 784, 803, 874, 1372, 1462
PflMI CCANNNNNTGG 1 cut(s) 634
PfoI TCCNGGA 1 cut(s) 146
PkrI GCNGC 7 cut(s) 324, 672, 675, 1149, 1152, 1155, 1216
PleI GAGTC 6 cut(s) 95, 412, 484, 709, 933, 1042
PluTI GGCGCC 1 cut(s) 665
PpsI GAGTC 6 cut(s) 95, 412, 484, 709, 933, 1042
PpuMI RGGWCCY 1 cut(s) 1541
PshAI GACNNNNGTC 1 cut(s) 884
Psp5II RGGWCCY 1 cut(s) 1541
Psp6I CCWGG 4 cut(s) 96, 1087, 1195, 1240
PspGI CCWGG 4 cut(s) 96, 1087, 1195, 1240
PspN4I GGNNCC 4 cut(s) 663, 684, 1425, 1542
PspPI GGNCC 3 cut(s) 1091, 1220, 1541
PspPPI RGGWCCY 1 cut(s) 1541
PstNI CAGNNNCTG 1 cut(s) 1037
PsuI RGATCY 1 cut(s) 530
PvuII CAGCTG 1 cut(s) 325
RsaI GTAC 3 cut(s) 1041, 1249, 1425
RsaNI GTAC 3 cut(s) 1040, 1248, 1424
RseI CAYNNNNRTG 2 cut(s) 234, 1055
SaqAI TTAA 1 cut(s) 1500
SatI GCNGC 7 cut(s) 323, 671, 674, 1148, 1151, 1154, 1215
Sau3AI GATC 7 cut(s) 11, 371, 388, 459, 530, 1105, 1444
Sau96I GGNCC 3 cut(s) 1091, 1220, 1541
ScaI AGTACT 1 cut(s) 1249
SchI GAGTC 6 cut(s) 95, 413, 484, 709, 934, 1043
ScrFI CCNGG 8 cut(s) 32, 33, 98, 148, 1089, 1095, 1197, 1242
SduI GDGCHC 2 cut(s) 38, 1192
SexAI ACCWGGT 1 cut(s) 1195
SfaNI GCATC 5 cut(s) 357, 545, 580, 1047, 1329
SfcI CTRYAG 1 cut(s) 205
SfoI GGCGCC 1 cut(s) 663
SinI GGWCC 2 cut(s) 1220, 1541
SmaI CCCGGG 1 cut(s) 33
SmiMI CAYNNNNRTG 2 cut(s) 234, 1055
SmlI CTYRAG 2 cut(s) 413, 422
SmoI CTYRAG 2 cut(s) 413, 422
SphI GCATGC 1 cut(s) 1054
SsiI CCGC 3 cut(s) 485, 779, 920
SspDI GGCGCC 1 cut(s) 661
SspI AATATT 2 cut(s) 791, 1289
SspMI CTAG 2 cut(s) 503, 1005
StyD4I CCNGG 8 cut(s) 30, 31, 96, 146, 1087, 1093, 1195, 1240
StyI CCWWGG 2 cut(s) 839, 1428
TaaI ACNGT 4 cut(s) 122, 250, 948, 1268
TaiI ACGT 1 cut(s) 1452
TaqI TCGA 3 cut(s) 48, 814, 1138
TatI WGTACW 1 cut(s) 1247
TfiI GAWTC 7 cut(s) 45, 221, 784, 803, 874, 1372, 1462
Tru1I TTAA 1 cut(s) 1500
Tru9I TTAA 1 cut(s) 1500
TscAI CASTG 3 cut(s) 127, 1068, 1273
TseFI GTSAC 2 cut(s) 712, 844
TseI GCWGC 7 cut(s) 322, 670, 673, 1147, 1150, 1153, 1214
Tsp45I GTSAC 2 cut(s) 712, 844
TspDTI ATGAA 3 cut(s) 218, 278, 408
TspGWI ACGGA 1 cut(s) 891
TspMI CCCGGG 1 cut(s) 31
TspRI CASTG 3 cut(s) 127, 1068, 1273
Van91I CCANNNNNTGG 1 cut(s) 634
VpaK11BI GGWCC 2 cut(s) 1220, 1541
XagI CCTNNNNNAGG 2 cut(s) 1086, 1548
XapI RAATTY 1 cut(s) 1522
XceI RCATGY 1 cut(s) 1054
XmaI CCCGGG 1 cut(s) 31
XmiI GTMKAC 2 cut(s) 990, 1260
XmnI GAANNNNTTC 2 cut(s) 225, 307
XspI CTAG 2 cut(s) 503, 1005
ZrmI AGTACT 1 cut(s) 1249
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.