Rh2DG348100

callose synthase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2D
Physical Location & Seq
Forward (+)
48357531 .. 48364925
7395 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2DG348100.1

Sequence Viewer

Length: 5319 bp
ATGAGTATCCGCCAGGGTACTCCTCCGGCCCAAGCCCCCGACCCGGAATCCGAGCCCTACAACATCATCCCCGTCCACAACCTCCTCGCCGACCACCCCTCTCTCCGCTTCCCCGAGGTCCGCGCCGCCGCCGCCGCCCTCCGCGCCGTGGGCAACCTCCGCAGGCCCCCCTACGCCCAATGGCGCGACCACATGGACCTCCTGGACTGGCTCGCCTTGTTCTTCGGCTTCCAATACGACAACGTCCGCAACCAGCGGGAGCACATCGTCCTCCACCTCGCCAACGCCCAGATGCGCCTGAATCCTCCGCCGGACAACATCGACACCCTCGACGGCGCCGTTTTGCGCAAGTTCCGCAAGAAGCTCCTCCTCAATTACACCAACTGGTGCTCCTATCTCGGCAAGAAGTCCAACATTTGGATCTCCGACGACCACCACCGCCGCGACGCCGCCGCCGACCACCGCCGAGAGCTCCTCTACGTGGGCCTCTATCTGCTGATCTGGGGCGAGGCCGCCAATCTCAGGTTCGTGCCCGAGTGCTTGTGCTATATATTTCATAACATGGCCATGGAGTTGAATAAGATTCTGGAGGATTATATTGATGAGAGTACGGGGCAGGCGGTGATGCCCTCCGTTTCGGGGGAGAATGCCTTCTTGAATTGTGTTGTCAAGCCCATTTATGAGACCATTAGGGCGGAGGTTGAGGGCAGCAAGAATGGGACTGCCCCACACAGTGTTTGGAGGAACTATGATGATATCAATGAGTACTTTTGGAGCAAGCGGTGTTTCGAAAAGCTCAAGTGGCCTCTAGATATTGGCAGCAACTTCTTTGTGACTAATAGTAAGAGTAAGCATGTGGGGAAGACTGGTTTTGTGGAGCAGAGGTCCTTCTGGAACTTGTTTAGGAGCTTTGACAAGCTCTGGATCATGTTGTTCTTGTTCCTTCAGGCCGCGATTATTGTTGCTTGGGAGGAGAAGGAGTATCCCTGGCAGGCCTTGGAGGATAGGGATGTCCAGGTCAGGGTGCTTACTGTGTTTTTCACTTGGACTGGTTTGAGGTTTTTGCAGTCCATACTTGATGTTGGGATGCAGTATAGTCTGGTTTCCAGGGAGACTATGGGGCTCGGAGTCAGGATGGTCTGCAAGAGCATTGCTGCTGCATGCTGGATTATTGTTTTCGGGGTCTGTTATGGGAGGATATGGTCCCAGAGAAACCTTGATAGGCGGTGGTCTGCTGAGGCAGAAAGGCGGATTATGCAGTTTCTTTGGGTGGCATTGGTTTTCATCATTCCTGAGCTTTTGGCTGTGGCCTTCTTTATTCTTCCTTGGATTCGCAATTTTATGGAGAACTCAAACTGGAGGATATTTTATGCCTTATCCTGGTGGTTTCAGAGCAGAACTTTTGTTGGCCGTGGCTTGAGGGAAGGCCTTGTGGACAATGTCAAGTACACTCTGTTCTGGATTTTGGTGCTTTCTACCAAGTTTGCTTTCAGTTACTTCATGCTGATTAAACCCATGATTGTCCCATCTAAAGCACTCGTAAAGCTTGATAATGTGGAGTATGAGTGGTATCAGCCTTTCAAAAACAGCAACAAATTGTCAGTGGGATTGTTGTGGCTTCCTGTTGTTTTGATATACCTCATGGACATGCAGATCTGGTATTCGATCTACTCCTCATTTTGGGGGGCATTAGTCGGGTTGCTTGCGCATTTGGGTGAGATTCGAAATATCCAACAATTGAGGCTGAGATTCCAGTTCTTTGCAAGTGCAATTCAGTTTAATCTCATGCCAGAAGAGCAGATGTTAAATGCAAGGGGGACACTGAGGAGTAAGTTTAATGATGCTATCCACAGGTTGAAGCTGAGGTATGGCCTTGGACAGCCTTATAAGAAGCTTGAGTCCAACCAGATCGAGGCAACCAAGTTTGCGTTGATATGGAATGAGATAATATTGATCTTCAGGGAAGAAGATTTAATTTCTGACTGCGAGGTTGAGTTGTTAGAGCTACCACAGAATTCTTGGAATGTCAGGGTCATTCGCTGGCCTTGTTTCCTTCTGTGCAATGAACTGCTGCTTGCACTGAGTCAGGCCAAAGAGTTGATAGATGCTCCTGACAAGTGGCTCTGGTATAAGATTTGCAAGAATGAGTACAGGCGCTGTGCTGTGATAGAAGCTTATGATTGTATCAAGCACTTGATACTTGCCATTATAAAAACCAACACAGAAGAGCATTCAATTGTGACAGTCTTGTTTCAGGAAATTGATCACTCTATTCAGATTGAGAAGTTCACAAAAACTTTTAAAACCACTGCCCTTCCACAACTCCATGCCAAGTTGATCAAACTTTCTGAGCTGTTGAACAAACCTAAGAAAGATACAAACCAGGTGGTGAATACCCTTCAGGCTCTTTATGAGATTGCCATTCGAGATTTCTTCAAGGAGAAAAGAAGTACTGAACAGCTCATTGAGGACGGTTTGGCTCTCCGTGATCCATCTTCTGCTGCAGGGCTGCTTTTTGAGAATGCTGTTGGGTTGCCTGATCCTAATGATGGATCCTTCTATCGGCAGGTTCGACGCCTGCACACAATACTTACCTCTCGGGACTCGATGCAGAATATTCCAGTTAACCTTGAGGCGAGACGCAGAATTGCCTTTTTTAGTAACTCCCTATTTATGAACATACCCCATGCTCCACAGGTTGAGAAAATGATGGCTTTCAGTGTTCTGACCCCGTACTACAGTGAAGAAGTATTGTACAGCAAAGAACAACTGCGTACTGAGAATGAAGATGGGATTTCTACCCTGTACTATCTACAGACAATATATGTTGATGAGTGGAAAAATTTCATGGAGAGGATGCGTCGAGAAGGAATAGCCATTGATGATGAGATATGGACAACGAAGTTGAGGGAACTCAGGCTTTGGGCGTCTTACAGAGGACAGACACTTACTCGAACCGTAAGGGGGATGATGTATTATTTTCGGGCTCTTAAGATGTTGGCTTTTCTGGATTCTGCATCAGAGATGGACATTCGGGAAGGTTCACAAGAAGTTGGTTCTATGATGCGAGACATTGGTTTGGATGGTTTGACCTCGGAGAGGTCACCTTCTTCCAGGAGTTTAAGTAGAACAAGCAGTTGTGTGAACTCGTTGTACAAAGGTCATGAAGTTGGAACTGTTTTGATGAAATATACATATGTGGTTGCATGCCAGATATATGGAACACAAAAGGCGAAGAAAGATCCCCATGCTGATGAAATTTTGTATCTGATGAAAACCAATGAAGCACTTCGGATTGCCTATGTTGACGAGGTTTCAACTGGCAGGGATGAGAAGGAATATTATTCTGTTCTTGTCAAGTATGATAATCAATTAGAGAAAGAAGTGGAAATCTATCGCATTAAGTTACCTGGTCCCTTGAAGCTCGGAGAGGGGAAACCAGAGAATCAAAATCATGCCATTATCTTCACTCGTGGTGATGCGGTTCAGACTATTGATATGAACCAAGACAATTATTTTGAGGAGGCACTCAAAATGAGGAATCTATTGGAAGAATACAGGCGCTATTATGGTATCCGGAAGCCTACGATCTTGGGAGTTAGGGAGCATGTCTTTACTGGTTCTGTCTCATCACTTGCTTGGTTTATGTCAGCTCAGGAAACAAGTTTTGTCACCTTGGGACAGCGGGTGTTGGCAAACCCTTTGAAAATTCGAATGCATTATGGTCATCCAGATGTCTTTGACCGATTTTGGTTCTTGACTCGAGGTGGCATCAGTAAAGCTTCCAGGGTGATTAACATCAGTGAAGACATTTTTGCTGGCTTTAATTGCACTTTGCGTGGAGGCAACGTCACCCACCATGAATACATCCAAGTTGGCAAGGGAAGGGATGTTGGGTTTAATCAAATCTCCATGTTTGAGGCCAAGGTTGCTAGTGGAAACGGGGAGCAAGTTCTGAGCAGAGATGTGTATAGGTTGGGCCATAGGCTTGATTTCTTGCGGATGTTATCATTCTTTTATACTACAGTGGGTTTCTTTTTCAACACAATGATGGTGATTTTAACTGTGTATGCCTTTCTATGGGGCCGACTTTATCTGGCTCTCAGTGGTATTGAAGGTTCTATATTGGAGGATGATACCAGTAACAGAGCACTTGGTACAGTCTTGAATCAGCAGTTTATTATCCAGCTTGGTCTGTTCACTGCCCTTCCAATGATAGTGGAGAATTCTCTTGAGCATGGGTTTCTCCAAGCTATCTGGGATTTCTTGACAATGCAGCTCCAGCTTTCTTCAGTTTTCTACACATTTTCAATGGGAACTCGTACCCACTATTTTGGGAGAACCATTCTTCATGGTGGGGCAAAATATCGAGCGACTGGACGTGGCTTTGTTGTGCAGCACAAGAGTTTTGCAGAGAATTATAGACTCTATGCCCGTAGCCATTTTGTGAAAGCAATTGAACTTGGTTTGATACTTACAGTTTATGCGGCATACAGTCCCGTGGCTAAGGACACATTTGTTTACATAGCAATGACCATCACAAGTTGGTTTATGGTGTTGTCCTGGTTTATGGCTCCCTTCGTTTTCAATCCTTCTGGCTTTGATTGGCTGAAGACTGTTGATGATTTTGATGACTTTATGAACTGGATTTGGTATCGTGGCAGTGTGTTTGCCAAAGCTGAACAGAGCTGGGAAAGATGGTGGTATGAGGAGCAGGATCATCTAAGGACAACTGGCGTCTGGGGAAAGTTGCTGGAGATAATTTTAGATCTGCGCTTCTTCTTTTTCCAGTATGGGATCGTATACCAGCTTGGTATTGCTGATGACAGTAGAAGTATACTTGTTTACTTGTTATCTTGGATCTATGTGTTCCTGGCTTTTGGCATCTTTATCGTAATAGTGTATGCTCGGGTAAAATATGCTGCAAAAGATCACATTTACTACCGACTGGTCCAATTTCTTGTCATTAAACTTGCACTACTCGTGATAATTGCCCTGTTGGAATTCACAAACTTCAGGTTCATGGATATATTCACCAGTCTTCTGGCATTCATCCCTACTGGTTGGGGTTTGATATTGATAGCACAAGTATTCCGCCCCTTACTACAGCGCACTATACTCTGGGAGATTGTTGTTTCTGTGGCTCGACTGTATGATATATTGTTCGGGGTGATTGTATTGACTCCTGTGGCAGTATTATCATGGTTTCCTGGTTTCCAGTCTATGCAGACTAGGATACTGTTTAATGACGCATTCAGCAGGGGTCTTCGTATATTCCAGATCGTTACAGGAAAAAAGAAGTCCAAGACAGATTCGTGA

Protein Analysis

1772

Amino Acids

206.47

Weight (kDa)

8.73

Isoelectric Point (pI)

37.76

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FKS1_dom1 PF14288 157 - 269 8.2e-45 1,3-beta-glucan synthase subunit FKS1, domain-1
CALS1 PF25968 682 - 865 7.4e-32 Callose synthase 1 domain
Glucan_synthase PF02364 873 - 1633 2e-261 1,3-beta-glucan synthase component
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0014998)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G03550
fragaria_vesca FvH4_6g26200
malus_domestica MD09G1247400.v1.1 MD17G1240300.v1.1
prunus_persica Prupe.3G138400_v2.0.a1
pyrus_communis pycom17g24360
rosa_chinensis RchiOBHm_Chr2g0126481
rosa_laevigata RLG00000018906
rosa_multiflora Rmu_sc0000662.1_g000007
rosa_roxburghii Rroxscaffold_2G00117140
rosa_rugosa Rorug02G0263500
rosa_samantha Rh2AG320100 Rh2BG328800 Rh2CG308500 Rh2DG348100
rosa_wichuraiana Rw2G025950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1887, 2210
Acc16I TGCGCA 2 cut(s) 347, 1707
Acc36I ACCTGC 1 cut(s) 2557
AccB1I GGYRCC 1 cut(s) 335
AccB7I CCANNNNNTGG 1 cut(s) 417
AccI GTMKAC 2 cut(s) 4803, 4837
AccII CGCG 5 cut(s) 123, 144, 186, 444, 953
AccIII TCCGGA 1 cut(s) 3576
AcoI YGGCCR 2 cut(s) 564, 1408
AcsI RAATTY 6 cut(s) 2014, 2842, 3258, 3708, 4225, 5003
AcuI CTGAAG 6 cut(s) 929, 1942, 2384, 4275, 4631, 4999
AcyI GRCGYC 5 cut(s) 336, 447, 2575, 2927, 4737
AdeI CACNNNGTG 1 cut(s) 734
AflII CTTAAG 1 cut(s) 2990
AjiI CACGTC 1 cut(s) 4382
AjuI GAANNNNNNNTTGG 4 cut(s) 509, 541, 1472, 1504
Alw21I GWGCWC 4 cut(s) 264, 392, 474, 4153
Alw26I GTCTC 5 cut(s) 677, 1106, 2632, 3063, 3631
AlwNI CAGNNNCTG 1 cut(s) 2157
Ama87I CYCGRG 5 cut(s) 113, 533, 2598, 3762, 4908
Aor13HI TCCGGA 1 cut(s) 3576
ApoI RAATTY 6 cut(s) 2014, 2842, 3258, 3708, 4225, 5003
ArsI GACNNNNNNTTYG 2 cut(s) 3500, 3532
Asp700I GAANNNNTTC 3 cut(s) 650, 2843, 3288
AsuC2I CCSGG 1 cut(s) 44
AsuII TTCGAA 3 cut(s) 789, 1723, 3712
AvaI CYCGRG 5 cut(s) 113, 533, 2598, 3762, 4908
AvaII GGWCC 6 cut(s) 118, 196, 885, 1203, 3413, 4951
BaeGI GKGCMC 1 cut(s) 534
BalI TGGCCA 1 cut(s) 566
BamHI GGATCC 1 cut(s) 2552
BanI GGYRCC 1 cut(s) 335
BanII GRGCYC 4 cut(s) 57, 474, 1125, 2989
BauI CACGAG 2 cut(s) 3471, 4982
BbsI GAAGAC 5 cut(s) 869, 3813, 4619, 5033, 5258
Bbv12I GWGCWC 4 cut(s) 264, 392, 474, 4153
BbvCI CCTCAGC 2 cut(s) 1236, 1862
BceAI ACGGC 4 cut(s) 131, 323, 349, 1395
BcgI CGANNNNNNTGC 2 cut(s) 4873, 4907
BciVI GTATCC 4 cut(s) 17, 993, 3584, 5229
BclI TGATCA 2 cut(s) 2263, 2337
BcnI CCSGG 1 cut(s) 44
BcoDI GTCTC 5 cut(s) 677, 1106, 2632, 3063, 3631
BfaI CTAG 3 cut(s) 809, 3933, 5232
BfmI CTRYAG 5 cut(s) 2502, 2737, 2813, 4023, 5105
BfoI RGCGCY 3 cut(s) 339, 2158, 3565
BfrI CTTAAG 1 cut(s) 2990
BfuAI ACCTGC 1 cut(s) 2557
BfuI GTATCC 4 cut(s) 17, 993, 3584, 5229
BglII AGATCT 2 cut(s) 1653, 4768
BmcAI AGTACT 2 cut(s) 767, 2452
Bme18I GGWCC 6 cut(s) 118, 196, 885, 1203, 3413, 4951
BmeT110I CYCGRG 5 cut(s) 113, 533, 2598, 3762, 4908
BmgBI CACGTC 1 cut(s) 4382
BmiI GGNNCC 7 cut(s) 167, 337, 1205, 2554, 3415, 4085, 4575
BpiI GAAGAC 5 cut(s) 869, 3813, 4619, 5033, 5258
BplI GAGNNNNNCTC 2 cut(s) 459, 491
BpmI CTGGAG 4 cut(s) 608, 1378, 4265, 4775
Bpu10I CCTNAGC 5 cut(s) 1236, 1293, 1862, 3654, 4506
Bpu14I TTCGAA 3 cut(s) 789, 1723, 3712
BpuEI CTTGAG 5 cut(s) 782, 1438, 1916, 2651, 4253
BpuMI CCSGG 1 cut(s) 44
BsaAI YACGTR 1 cut(s) 481
BsaBI GATNNNNATC 1 cut(s) 3797
BsaHI GRCGYC 5 cut(s) 336, 447, 2575, 2927, 4737
BsaI GGTCTC 1 cut(s) 677
BsaWI WCCGGW 1 cut(s) 3576
Bse3DI GCAATG 3 cut(s) 1149, 2068, 4536
Bse8I GATNNNNATC 1 cut(s) 3797
BseAI TCCGGA 1 cut(s) 3576
BseJI GATNNNNATC 1 cut(s) 3797
BseMI GCAATG 3 cut(s) 1149, 2068, 4536
BseSI GKGCMC 1 cut(s) 534
BseYI CCCAGC 1 cut(s) 4689
BsgI GTGCAG 2 cut(s) 2564, 4415
Bsh1236I CGCG 5 cut(s) 123, 144, 186, 444, 953
BshNI GGYRCC 1 cut(s) 335
BsiHKAI GWGCWC 4 cut(s) 264, 392, 474, 4153
BsiHKCI CYCGRG 5 cut(s) 113, 533, 2598, 3762, 4908
BsiSI CCGG 4 cut(s) 26, 44, 311, 3577
BslFI GGGAC 8 cut(s) 733, 1189, 1508, 1831, 2615, 3399, 3693, 4482
BsmAI GTCTC 5 cut(s) 677, 1106, 2632, 3063, 3631
BsmBI CGTCTC 1 cut(s) 2632
BsmFI GGGAC 8 cut(s) 733, 1189, 1508, 1831, 2615, 3399, 3693, 4482
BsmI GAATGC 6 cut(s) 652, 2230, 2527, 3720, 5048, 5252
Bso31I GGTCTC 1 cut(s) 677
BsoBI CYCGRG 5 cut(s) 113, 533, 2598, 3762, 4908
Bsp119I TTCGAA 3 cut(s) 789, 1723, 3712
Bsp1286I GDGCHC 8 cut(s) 57, 264, 392, 474, 534, 1125, 2989, 4153
Bsp13I TCCGGA 1 cut(s) 3576
Bsp1407I TGTACA 2 cut(s) 2754, 3153
Bsp19I CCATGG 1 cut(s) 567
BspEI TCCGGA 1 cut(s) 3576
BspFNI CGCG 5 cut(s) 123, 144, 186, 444, 953
BspHI TCATGA 1 cut(s) 3163
BspLI GGNNCC 7 cut(s) 167, 337, 1205, 2554, 3415, 4085, 4575
BspMAI CTGCAG 1 cut(s) 2506
BspMI ACCTGC 1 cut(s) 2557
BspQI GCTCTTC 2 cut(s) 1788, 2220
BspT104I TTCGAA 3 cut(s) 789, 1723, 3712
BspT107I GGYRCC 1 cut(s) 335
BspTI CTTAAG 1 cut(s) 2990
BspTNI GGTCTC 1 cut(s) 677
BsrDI GCAATG 3 cut(s) 1149, 2068, 4536
BsrGI TGTACA 2 cut(s) 2754, 3153
BssNAI GTATAC 2 cut(s) 4804, 4838
BssNI GRCGYC 5 cut(s) 336, 447, 2575, 2927, 4737
BssSI CACGAG 2 cut(s) 3471, 4982
BssT1I CCWWGG 6 cut(s) 567, 996, 1325, 1873, 3675, 3924
Bst1107I GTATAC 2 cut(s) 4804, 4838
Bst2BI CACGAG 2 cut(s) 3471, 4982
Bst6I CTCTTC 2 cut(s) 1788, 2220
BstACI GRCGYC 5 cut(s) 336, 447, 2575, 2927, 4737
BstAFI CTTAAG 1 cut(s) 2990
BstAUI TGTACA 2 cut(s) 2754, 3153
BstBAI YACGTR 1 cut(s) 481
BstBI TTCGAA 3 cut(s) 789, 1723, 3712
BstDSI CCRYGG 4 cut(s) 147, 567, 1411, 4500
BstEII GGTNACC 1 cut(s) 3102
BstENI CCTNNNNNAGG 1 cut(s) 3097
BstFNI CGCG 5 cut(s) 123, 144, 186, 444, 953
BstH2I RGCGCY 3 cut(s) 339, 2158, 3565
BstMAI GTCTC 5 cut(s) 677, 1106, 2632, 3063, 3631
BstNSI RCATGY 5 cut(s) 857, 1164, 1651, 3210, 3611
BstPI GGTNACC 1 cut(s) 3102
BstSFI CTRYAG 5 cut(s) 2502, 2737, 2813, 4023, 5105
BstSLI GKGCMC 1 cut(s) 534
BstUI CGCG 5 cut(s) 123, 144, 186, 444, 953
BstV2I GAAGAC 5 cut(s) 869, 3813, 4619, 5033, 5258
BstX2I RGATCY 6 cut(s) 420, 1653, 2552, 3241, 4768, 4860
BstXI CCANNNNNNTGG 3 cut(s) 3218, 4334, 5044
BstYI RGATCY 6 cut(s) 420, 1653, 2552, 3241, 4768, 4860
BstZ17I GTATAC 2 cut(s) 4804, 4838
BsuI GTATCC 4 cut(s) 17, 993, 3584, 5229
BtgI CCRYGG 4 cut(s) 147, 567, 1411, 4500
BtrI CACGTC 1 cut(s) 4382
BtsI GCAGTG 3 cut(s) 2307, 4200, 4669
BveI ACCTGC 1 cut(s) 2557
CaiI CAGNNNCTG 1 cut(s) 2157
CciI TCATGA 1 cut(s) 3163
CseI GACGC 7 cut(s) 455, 2583, 2649, 2849, 2916, 4726, 5258
CsiI ACCWGGT 2 cut(s) 2382, 3409
CspCI CAANNNNNGTGG 4 cut(s) 2367, 2402, 4200, 4235
DinI GGCGCC 1 cut(s) 337
DraI TTTAAA 1 cut(s) 2302
DraIII CACNNNGTG 1 cut(s) 734
EaeI YGGCCR 2 cut(s) 564, 1408
Eam1104I CTCTTC 2 cut(s) 1788, 2220
EarI CTCTTC 2 cut(s) 1788, 2220
EciI GGCGGA 4 cut(s) 297, 710, 1264, 5084
Ecl136II GAGCTC 1 cut(s) 472
Eco130I CCWWGG 6 cut(s) 567, 996, 1325, 1873, 3675, 3924
Eco147I AGGCCT 2 cut(s) 995, 1428
Eco24I GRGCYC 4 cut(s) 57, 474, 1125, 2989
Eco31I GGTCTC 1 cut(s) 677
Eco32I GATATC 1 cut(s) 757
Eco47I GGWCC 6 cut(s) 118, 196, 885, 1203, 3413, 4951
Eco53kI GAGCTC 1 cut(s) 472
Eco57I CTGAAG 6 cut(s) 929, 1942, 2384, 4275, 4631, 4999
Eco88I CYCGRG 5 cut(s) 113, 533, 2598, 3762, 4908
Eco91I GGTNACC 1 cut(s) 3102
EcoICRI GAGCTC 1 cut(s) 472
EcoNI CCTNNNNNAGG 1 cut(s) 3097
EcoO109I RGGNCCY 2 cut(s) 165, 885
EcoO65I GGTNACC 1 cut(s) 3102
EcoRI GAATTC 3 cut(s) 2014, 4225, 5003
EcoRV GATATC 1 cut(s) 757
EcoT14I CCWWGG 6 cut(s) 567, 996, 1325, 1873, 3675, 3924
EcoT22I ATGCAT 1 cut(s) 3720
EcoT38I GRGCYC 4 cut(s) 57, 474, 1125, 2989
EgeI GGCGCC 1 cut(s) 337
EheI GGCGCC 1 cut(s) 337
ErhI CCWWGG 6 cut(s) 567, 996, 1325, 1873, 3675, 3924
Esp3I CGTCTC 1 cut(s) 2632
FaqI GGGAC 8 cut(s) 733, 1189, 1508, 1831, 2615, 3399, 3693, 4482
FauI CCCGC 2 cut(s) 249, 3678
FauNDI CATATG 1 cut(s) 3196
FbaI TGATCA 2 cut(s) 2263, 2337
FblI GTMKAC 2 cut(s) 4803, 4837
FriOI GRGCYC 4 cut(s) 57, 474, 1125, 2989
FspBI CTAG 3 cut(s) 809, 3933, 5232
FspI TGCGCA 2 cut(s) 347, 1707
GsaI CCCAGC 1 cut(s) 4693
GsuI CTGGAG 4 cut(s) 608, 1378, 4265, 4775
HaeII RGCGCY 3 cut(s) 339, 2158, 3565
HapII CCGG 4 cut(s) 26, 44, 311, 3577
HgaI GACGC 7 cut(s) 455, 2583, 2649, 2849, 2916, 4726, 5258
Hin1I GRCGYC 5 cut(s) 336, 447, 2575, 2927, 4737
HincII GTYRAC 2 cut(s) 2626, 3307
HindII GTYRAC 2 cut(s) 2626, 3307
HindIII AAGCTT 4 cut(s) 1544, 1892, 2172, 3780
HpaI GTTAAC 1 cut(s) 2626
HpaII CCGG 4 cut(s) 26, 44, 311, 3577
Hpy99I CGWCG 5 cut(s) 335, 431, 449, 2577, 2865
HpyCH4IV ACGT 4 cut(s) 243, 480, 3849, 4381
HpySE526I ACGT 4 cut(s) 243, 480, 3849, 4381
Hsp92I GRCGYC 5 cut(s) 336, 447, 2575, 2927, 4737
KasI GGCGCC 1 cut(s) 335
Kpn2I TCCGGA 1 cut(s) 3576
Ksp22I TGATCA 2 cut(s) 2263, 2337
KspAI GTTAAC 1 cut(s) 2626
LguI GCTCTTC 2 cut(s) 1788, 2220
MabI ACCWGGT 2 cut(s) 2382, 3409
MaeI CTAG 3 cut(s) 809, 3933, 5232
MaeII ACGT 4 cut(s) 243, 480, 3849, 4381
MfeI CAATTG 3 cut(s) 1736, 2235, 4455
MflI RGATCY 6 cut(s) 420, 1653, 2552, 3241, 4768, 4860
MhlI GDGCHC 8 cut(s) 57, 264, 392, 474, 534, 1125, 2989, 4153
MlsI TGGCCA 1 cut(s) 566
MluNI TGGCCA 1 cut(s) 566
Mly113I GGCGCC 1 cut(s) 336
MlyI GAGTC 7 cut(s) 1137, 1907, 2092, 2597, 3754, 4419, 5176
MmeI TCCRAC 6 cut(s) 435, 450, 1756, 1926, 3151, 4980
Mox20I TGGCCA 1 cut(s) 566
Mph1103I ATGCAT 1 cut(s) 3720
MroI TCCGGA 1 cut(s) 3576
MroXI GAANNNNTTC 3 cut(s) 650, 2843, 3288
MscI TGGCCA 1 cut(s) 566
MslI CAYNNNNRTG 7 cut(s) 566, 1646, 1713, 3252, 3732, 4049, 4529
Msp20I TGGCCA 1 cut(s) 566
MspA1I CMGCKG 2 cut(s) 256, 3685
MspCI CTTAAG 1 cut(s) 2990
MspI CCGG 4 cut(s) 26, 44, 311, 3577
MunI CAATTG 3 cut(s) 1736, 2235, 4455
Mva1269I GAATGC 6 cut(s) 652, 2230, 2527, 3720, 5048, 5252
MvnI CGCG 5 cut(s) 123, 144, 186, 444, 953
NarI GGCGCC 1 cut(s) 336
NciI CCSGG 1 cut(s) 44
NcoI CCATGG 1 cut(s) 567
NdeI CATATG 1 cut(s) 3196
NlaIV GGNNCC 7 cut(s) 167, 337, 1205, 2554, 3415, 4085, 4575
NmeAIII GCCGAG 2 cut(s) 378, 491
NmuCI GTSAC 5 cut(s) 832, 2239, 3102, 3670, 3850
NsbI TGCGCA 2 cut(s) 347, 1707
NsiI ATGCAT 1 cut(s) 3720
NspI RCATGY 5 cut(s) 857, 1164, 1651, 3210, 3611
NspV TTCGAA 3 cut(s) 789, 1723, 3712
PaeI GCATGC 2 cut(s) 1164, 3210
PaeR7I CTCGAG 1 cut(s) 3762
PagI TCATGA 1 cut(s) 3163
PceI AGGCCT 2 cut(s) 995, 1428
PciSI GCTCTTC 2 cut(s) 1788, 2220
PcsI WCGNNNNNNNCGW 4 cut(s) 327, 336, 453, 2569
PctI GAATGC 6 cut(s) 652, 2230, 2527, 3720, 5048, 5252
PdmI GAANNNNTTC 3 cut(s) 650, 2843, 3288
PflFI GACNNNGTC 2 cut(s) 242, 1439
PflMI CCANNNNNTGG 1 cut(s) 417
PfoI TCCNGGA 2 cut(s) 201, 3113
PleI GAGTC 7 cut(s) 1136, 1906, 2091, 2597, 3754, 4419, 5176
PluTI GGCGCC 1 cut(s) 339
PpsI GAGTC 7 cut(s) 1136, 1906, 2091, 2597, 3754, 4419, 5176
Ppu21I YACGTR 1 cut(s) 481
PpuMI RGGWCCY 1 cut(s) 885
PsiI TTATAA 2 cut(s) 1887, 2210
Psp124BI GAGCTC 1 cut(s) 474
Psp5II RGGWCCY 1 cut(s) 885
PspEI GGTNACC 1 cut(s) 3102
PspFI CCCAGC 1 cut(s) 4689
PspN4I GGNNCC 7 cut(s) 167, 337, 1205, 2554, 3415, 4085, 4575
PspPPI RGGWCCY 1 cut(s) 885
PspXI VCTCGAGB 1 cut(s) 3762
PsrI GAACNNNNNNTAC 6 cut(s) 1439, 1471, 3137, 3169, 4102, 4134
PstI CTGCAG 1 cut(s) 2506
PstNI CAGNNNCTG 1 cut(s) 2157
PsuI RGATCY 6 cut(s) 420, 1653, 2552, 3241, 4768, 4860
PsyI GACNNNGTC 2 cut(s) 242, 1439
RseI CAYNNNNRTG 7 cut(s) 566, 1646, 1713, 3252, 3732, 4049, 4529
SacI GAGCTC 1 cut(s) 474
SapI GCTCTTC 2 cut(s) 1788, 2220
ScaI AGTACT 2 cut(s) 767, 2452
SchI GAGTC 7 cut(s) 1137, 1907, 2092, 2597, 3754, 4419, 5176
SduI GDGCHC 8 cut(s) 57, 264, 392, 474, 534, 1125, 2989, 4153
SexAI ACCWGGT 2 cut(s) 2382, 3409
SfcI CTRYAG 5 cut(s) 2502, 2737, 2813, 4023, 5105
SfoI GGCGCC 1 cut(s) 337
Sfr274I CTCGAG 1 cut(s) 3762
SfuI TTCGAA 3 cut(s) 789, 1723, 3712
SinI GGWCC 6 cut(s) 118, 196, 885, 1203, 3413, 4951
SlaI CTCGAG 1 cut(s) 3762
SmiMI CAYNNNNRTG 7 cut(s) 566, 1646, 1713, 3252, 3732, 4049, 4529
SmlI CTYRAG 7 cut(s) 797, 1417, 1895, 2630, 2990, 3762, 4232
SmoI CTYRAG 7 cut(s) 797, 1417, 1895, 2630, 2990, 3762, 4232
SphI GCATGC 2 cut(s) 1164, 3210
SseBI AGGCCT 2 cut(s) 995, 1428
SspDI GGCGCC 1 cut(s) 335
SspI AATATT 3 cut(s) 1950, 2617, 3341
SspMI CTAG 3 cut(s) 809, 3933, 5232
SstI GAGCTC 1 cut(s) 474
StuI AGGCCT 2 cut(s) 995, 1428
StyI CCWWGG 6 cut(s) 567, 996, 1325, 1873, 3675, 3924
TaiI ACGT 4 cut(s) 246, 483, 3852, 4384
TaqII GACCGA 1 cut(s) 3759
TatI WGTACW 7 cut(s) 765, 1446, 2148, 2450, 2754, 2805, 3153
TseFI GTSAC 5 cut(s) 832, 2239, 3102, 3670, 3850
Tsp45I GTSAC 5 cut(s) 832, 2239, 3102, 3670, 3850
TspGWI ACGGA 2 cut(s) 622, 2474
Tth111I GACNNNGTC 2 cut(s) 242, 1439
Van91I CCANNNNNTGG 1 cut(s) 417
Vha464I CTTAAG 1 cut(s) 2990
VpaK11BI GGWCC 6 cut(s) 118, 196, 885, 1203, 3413, 4951
XagI CCTNNNNNAGG 1 cut(s) 3097
XapI RAATTY 6 cut(s) 2014, 2842, 3258, 3708, 4225, 5003
XbaI TCTAGA 1 cut(s) 808
XceI RCATGY 5 cut(s) 857, 1164, 1651, 3210, 3611
XcmI CCANNNNNNNNNTGG 3 cut(s) 735, 1114, 2016
XhoI CTCGAG 1 cut(s) 3762
XmiI GTMKAC 2 cut(s) 4803, 4837
XmnI GAANNNNTTC 3 cut(s) 650, 2843, 3288
XspI CTAG 3 cut(s) 809, 3933, 5232
ZrmI AGTACT 2 cut(s) 767, 2452
Zsp2I ATGCAT 1 cut(s) 3720
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.