Autophagy protein Atg8 ubiquitin like
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G04620 AT4G04620 AT4G04620 AT4G21980 AT4G21980 |
| fragaria_vesca | FvH4_3g01980 FvH4_3g01980 |
| malus_domestica | MD05G1347700.v1.1 MD10G1322100.v1.1 |
| prunus_persica | Prupe.4G019800_v2.0.a1 Prupe.4G019800_v2.0.a1 |
| pyrus_communis | pycom05g31530 pycom10g27260 |
| rosa_chinensis | RchiOBHm_Chr5g0002891 |
| rosa_laevigata | RLG00000031067 |
| rosa_multiflora | Rmu_sc0020722.1_g000004 |
| rosa_roxburghii | Rroxscaffold_1G00072970 |
| rosa_rugosa | Rorug04G0400400 |
| rosa_samantha | Rh5AG023100 Rh5BG026000 Rh5DG024500 |
| rosa_wichuraiana | Rw5G002180 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 56 |
| AciI | CCGC | 1 cut(s) | 266 |
| AclWI | GGATC | 1 cut(s) | 361 |
| AcoI | YGGCCR | 1 cut(s) | 175 |
| AfaI | GTAC | 2 cut(s) | 156, 188 |
| AgsI | TTSAA | 1 cut(s) | 19 |
| AluBI | AGCT | 5 cut(s) | 22, 110, 161, 211, 218 |
| AluI | AGCT | 5 cut(s) | 22, 110, 161, 211, 218 |
| AlwI | GGATC | 1 cut(s) | 361 |
| AoxI | GGCC | 1 cut(s) | 175 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 14, 87 |
| BalI | TGGCCA | 1 cut(s) | 177 |
| BbsI | GAAGAC | 1 cut(s) | 312 |
| BccI | CCATC | 1 cut(s) | 236 |
| BisI | GCNGC | 1 cut(s) | 267 |
| BlsI | GCNGC | 1 cut(s) | 268 |
| BpiI | GAAGAC | 1 cut(s) | 312 |
| BplI | GAGNNNNNCTC | 1 cut(s) | 28 |
| BpmI | CTGGAG | 1 cut(s) | 56 |
| BseMII | CTCAG | 1 cut(s) | 42 |
| BshFI | GGCC | 1 cut(s) | 177 |
| BsnI | GGCC | 1 cut(s) | 177 |
| Bsp143I | GATC | 2 cut(s) | 163, 353 |
| BspACI | CCGC | 1 cut(s) | 266 |
| BspANI | GGCC | 1 cut(s) | 177 |
| BspCNI | CTCAG | 1 cut(s) | 43 |
| BspPI | GGATC | 1 cut(s) | 361 |
| BssMI | GATC | 2 cut(s) | 163, 353 |
| Bst4CI | ACNGT | 1 cut(s) | 332 |
| BstDEI | CTNAG | 1 cut(s) | 51 |
| BstKTI | GATC | 2 cut(s) | 166, 356 |
| BstMBI | GATC | 2 cut(s) | 163, 353 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 224 |
| BstV2I | GAAGAC | 1 cut(s) | 312 |
| BstX2I | RGATCY | 1 cut(s) | 353 |
| BstYI | RGATCY | 1 cut(s) | 353 |
| BsuRI | GGCC | 1 cut(s) | 177 |
| BtsIMutI | CAGTG | 1 cut(s) | 337 |
| Csp6I | GTAC | 2 cut(s) | 155, 187 |
| CviAII | CATG | 1 cut(s) | 322 |
| CviJI | RGCY | 8 cut(s) | 22, 50, 110, 161, 177, 211, 218, 227 |
| CviKI_1 | RGCY | 8 cut(s) | 22, 50, 110, 161, 177, 211, 218, 227 |
| CviQI | GTAC | 2 cut(s) | 155, 187 |
| DdeI | CTNAG | 1 cut(s) | 51 |
| DpnI | GATC | 2 cut(s) | 165, 355 |
| DpnII | GATC | 2 cut(s) | 163, 353 |
| EaeI | YGGCCR | 1 cut(s) | 175 |
| FaeI | CATG | 1 cut(s) | 325 |
| FaiI | YATR | 2 cut(s) | 323, 328 |
| FalI | AAGNNNNNCTT | 1 cut(s) | 31 |
| FatI | CATG | 1 cut(s) | 321 |
| FblI | GTMKAC | 1 cut(s) | 56 |
| Fnu4HI | GCNGC | 1 cut(s) | 267 |
| Fsp4HI | GCNGC | 1 cut(s) | 267 |
| GluI | GCNGC | 1 cut(s) | 267 |
| GsuI | CTGGAG | 1 cut(s) | 56 |
| HaeIII | GGCC | 1 cut(s) | 177 |
| Hin1II | CATG | 1 cut(s) | 325 |
| HindIII | AAGCTT | 2 cut(s) | 20, 209 |
| HinfI | GANTC | 2 cut(s) | 53, 204 |
| Hpy166II | GTNNAC | 2 cut(s) | 57, 187 |
| Hpy188I | TCNGA | 1 cut(s) | 68 |
| Hpy188III | TCNNGA | 3 cut(s) | 35, 128, 244 |
| Hpy8I | GTNNAC | 2 cut(s) | 57, 187 |
| HpyAV | CCTTC | 1 cut(s) | 25 |
| HpyCH4III | ACNGT | 1 cut(s) | 332 |
| HpyCH4IV | ACGT | 1 cut(s) | 189 |
| HpyCH4V | TGCA | 1 cut(s) | 281 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 224 |
| HpyF3I | CTNAG | 1 cut(s) | 51 |
| HpySE526I | ACGT | 1 cut(s) | 189 |
| Hsp92II | CATG | 1 cut(s) | 325 |
| Kzo9I | GATC | 2 cut(s) | 163, 353 |
| LmnI | GCTCC | 1 cut(s) | 215 |
| LpnPI | CCDG | 5 cut(s) | 20, 93, 96, 141, 171 |
| MaeII | ACGT | 1 cut(s) | 189 |
| MalI | GATC | 2 cut(s) | 165, 355 |
| MboI | GATC | 2 cut(s) | 163, 353 |
| MboII | GAAGA | 4 cut(s) | 19, 154, 302, 317 |
| MflI | RGATCY | 1 cut(s) | 353 |
| MlsI | TGGCCA | 1 cut(s) | 177 |
| MluCI | AATT | 1 cut(s) | 179 |
| MluNI | TGGCCA | 1 cut(s) | 177 |
| MlyI | GAGTC | 1 cut(s) | 62 |
| MnlI | CCTC | 2 cut(s) | 42, 189 |
| Mox20I | TGGCCA | 1 cut(s) | 177 |
| MroXI | GAANNNNTTC | 2 cut(s) | 14, 87 |
| MscI | TGGCCA | 1 cut(s) | 177 |
| Msp20I | TGGCCA | 1 cut(s) | 177 |
| MspA1I | CMGCKG | 1 cut(s) | 161 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 224 |
| NdeII | GATC | 2 cut(s) | 163, 353 |
| NlaIII | CATG | 1 cut(s) | 325 |
| PdmI | GAANNNNTTC | 2 cut(s) | 14, 87 |
| PfeI | GAWTC | 1 cut(s) | 204 |
| PkrI | GCNGC | 1 cut(s) | 268 |
| PleI | GAGTC | 1 cut(s) | 61 |
| PpsI | GAGTC | 1 cut(s) | 61 |
| PsuI | RGATCY | 1 cut(s) | 353 |
| PvuII | CAGCTG | 1 cut(s) | 161 |
| RsaI | GTAC | 2 cut(s) | 156, 188 |
| RsaNI | GTAC | 2 cut(s) | 155, 187 |
| SatI | GCNGC | 1 cut(s) | 267 |
| Sau3AI | GATC | 2 cut(s) | 163, 353 |
| SchI | GAGTC | 1 cut(s) | 62 |
| SetI | ASST | 6 cut(s) | 24, 112, 163, 192, 213, 220 |
| Sse9I | AATT | 1 cut(s) | 179 |
| SsiI | CCGC | 1 cut(s) | 266 |
| TaaI | ACNGT | 1 cut(s) | 332 |
| TaiI | ACGT | 1 cut(s) | 192 |
| TasI | AATT | 1 cut(s) | 179 |
| TauI | GCSGC | 1 cut(s) | 269 |
| TfiI | GAWTC | 1 cut(s) | 204 |
| TscAI | CASTG | 1 cut(s) | 337 |
| TspRI | CASTG | 1 cut(s) | 337 |
| XmiI | GTMKAC | 1 cut(s) | 56 |
| XmnI | GAANNNNTTC | 2 cut(s) | 14, 87 |