Autophagy-related protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G04620 AT4G04620 AT4G04620 AT4G21980 AT4G21980 |
| fragaria_vesca | FvH4_3g01980 FvH4_3g01980 |
| malus_domestica | MD05G1347700.v1.1 MD10G1322100.v1.1 |
| prunus_persica | Prupe.4G019800_v2.0.a1 Prupe.4G019800_v2.0.a1 |
| pyrus_communis | pycom05g31530 pycom10g27260 |
| rosa_chinensis | RchiOBHm_Chr5g0002891 |
| rosa_laevigata | RLG00000031067 |
| rosa_multiflora | Rmu_sc0020722.1_g000004 |
| rosa_roxburghii | Rroxscaffold_1G00072970 |
| rosa_rugosa | Rorug04G0400400 |
| rosa_samantha | Rh5AG023100 Rh5BG026000 Rh5DG024500 |
| rosa_wichuraiana | Rw5G002180 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 278 |
| AciI | CCGC | 1 cut(s) | 333 |
| AclWI | GGATC | 1 cut(s) | 212 |
| AcoI | YGGCCR | 1 cut(s) | 3 |
| AcsI | RAATTY | 1 cut(s) | 87 |
| AcuI | CTGAAG | 1 cut(s) | 313 |
| AgsI | TTSAA | 3 cut(s) | 19, 26, 359 |
| AjuI | GAANNNNNNNTTGG | 1 cut(s) | 31 |
| AluBI | AGCT | 4 cut(s) | 12, 22, 56, 211 |
| AluI | AGCT | 4 cut(s) | 12, 22, 56, 211 |
| AlwI | GGATC | 1 cut(s) | 212 |
| AoxI | GGCC | 1 cut(s) | 3 |
| ApeKI | GCWGC | 2 cut(s) | 110, 266 |
| ApoI | RAATTY | 1 cut(s) | 87 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 344 |
| AsuHPI | GGTGA | 1 cut(s) | 106 |
| BalI | TGGCCA | 1 cut(s) | 5 |
| BbvI | GCAGC | 2 cut(s) | 97, 253 |
| BccI | CCATC | 1 cut(s) | 302 |
| BciVI | GTATCC | 1 cut(s) | 87 |
| BfaI | CTAG | 1 cut(s) | 57 |
| BfuI | GTATCC | 1 cut(s) | 87 |
| BisI | GCNGC | 2 cut(s) | 111, 267 |
| BlsI | GCNGC | 2 cut(s) | 112, 268 |
| BmiI | GGNNCC | 1 cut(s) | 352 |
| BsaWI | WCCGGW | 1 cut(s) | 91 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 241, 271, 327, 357 |
| BseGI | GGATG | 1 cut(s) | 313 |
| BseXI | GCAGC | 2 cut(s) | 97, 253 |
| BsgI | GTGCAG | 1 cut(s) | 237 |
| BshFI | GGCC | 1 cut(s) | 5 |
| BsiSI | CCGG | 1 cut(s) | 92 |
| BslFI | GGGAC | 1 cut(s) | 140 |
| BsmFI | GGGAC | 1 cut(s) | 140 |
| BsnI | GGCC | 1 cut(s) | 5 |
| Bsp143I | GATC | 2 cut(s) | 163, 204 |
| BspACI | CCGC | 1 cut(s) | 333 |
| BspANI | GGCC | 1 cut(s) | 5 |
| BspLI | GGNNCC | 1 cut(s) | 352 |
| BspPI | GGATC | 1 cut(s) | 212 |
| BspQI | GCTCTTC | 1 cut(s) | 354 |
| BssMI | GATC | 2 cut(s) | 163, 204 |
| Bst6I | CTCTTC | 2 cut(s) | 194, 354 |
| BstC8I | GCNNGC | 1 cut(s) | 48 |
| BstF5I | GGATG | 1 cut(s) | 313 |
| BstKTI | GATC | 2 cut(s) | 166, 207 |
| BstMBI | GATC | 2 cut(s) | 163, 204 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 224 |
| BstV1I | GCAGC | 2 cut(s) | 97, 253 |
| BsuI | GTATCC | 1 cut(s) | 87 |
| BsuRI | GGCC | 1 cut(s) | 5 |
| BtsCI | GGATG | 1 cut(s) | 313 |
| Cac8I | GCNNGC | 1 cut(s) | 48 |
| CviJI | RGCY | 7 cut(s) | 5, 12, 22, 56, 110, 211, 227 |
| CviKI_1 | RGCY | 7 cut(s) | 5, 12, 22, 56, 110, 211, 227 |
| DpnI | GATC | 2 cut(s) | 165, 206 |
| DpnII | GATC | 2 cut(s) | 163, 204 |
| EaeI | YGGCCR | 1 cut(s) | 3 |
| Eam1104I | CTCTTC | 2 cut(s) | 194, 354 |
| EarI | CTCTTC | 2 cut(s) | 194, 354 |
| Eco57I | CTGAAG | 1 cut(s) | 313 |
| EcoRI | GAATTC | 1 cut(s) | 87 |
| FaiI | YATR | 4 cut(s) | 30, 189, 230, 288 |
| FaqI | GGGAC | 1 cut(s) | 140 |
| FblI | GTMKAC | 1 cut(s) | 278 |
| Fnu4HI | GCNGC | 2 cut(s) | 111, 267 |
| FokI | GGATG | 1 cut(s) | 320 |
| Fsp4HI | GCNGC | 2 cut(s) | 111, 267 |
| FspBI | CTAG | 1 cut(s) | 57 |
| GluI | GCNGC | 2 cut(s) | 111, 267 |
| HaeIII | GGCC | 1 cut(s) | 5 |
| HapII | CCGG | 1 cut(s) | 92 |
| HindIII | AAGCTT | 1 cut(s) | 20 |
| HpaII | CCGG | 1 cut(s) | 92 |
| HphI | GGTGA | 1 cut(s) | 106 |
| Hpy166II | GTNNAC | 1 cut(s) | 279 |
| Hpy188I | TCNGA | 2 cut(s) | 198, 273 |
| Hpy188III | TCNNGA | 3 cut(s) | 35, 80, 128 |
| Hpy8I | GTNNAC | 1 cut(s) | 279 |
| HpyAV | CCTTC | 2 cut(s) | 100, 337 |
| HpyCH4V | TGCA | 2 cut(s) | 113, 218 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 224 |
| Kzo9I | GATC | 2 cut(s) | 163, 204 |
| LguI | GCTCTTC | 1 cut(s) | 354 |
| LpnPI | CCDG | 6 cut(s) | 20, 52, 93, 105, 141, 171 |
| Lsp1109I | GCAGC | 2 cut(s) | 97, 253 |
| MaeI | CTAG | 1 cut(s) | 57 |
| MaeIII | GTNAC | 1 cut(s) | 119 |
| MalI | GATC | 2 cut(s) | 165, 206 |
| MboI | GATC | 2 cut(s) | 163, 204 |
| MboII | GAAGA | 3 cut(s) | 154, 211, 371 |
| MlsI | TGGCCA | 1 cut(s) | 5 |
| MluCI | AATT | 3 cut(s) | 87, 179, 282 |
| MluNI | TGGCCA | 1 cut(s) | 5 |
| MnlI | CCTC | 4 cut(s) | 36, 195, 267, 298 |
| Mox20I | TGGCCA | 1 cut(s) | 5 |
| MroXI | GAANNNNTTC | 1 cut(s) | 344 |
| MscI | TGGCCA | 1 cut(s) | 5 |
| Msp20I | TGGCCA | 1 cut(s) | 5 |
| MspA1I | CMGCKG | 1 cut(s) | 333 |
| MspI | CCGG | 1 cut(s) | 92 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 224 |
| NdeII | GATC | 2 cut(s) | 163, 204 |
| NlaIV | GGNNCC | 1 cut(s) | 352 |
| NmuCI | GTSAC | 1 cut(s) | 119 |
| PciSI | GCTCTTC | 1 cut(s) | 354 |
| PdmI | GAANNNNTTC | 1 cut(s) | 344 |
| PkrI | GCNGC | 2 cut(s) | 112, 268 |
| PspN4I | GGNNCC | 1 cut(s) | 352 |
| SapI | GCTCTTC | 1 cut(s) | 354 |
| SatI | GCNGC | 2 cut(s) | 111, 267 |
| Sau3AI | GATC | 2 cut(s) | 163, 204 |
| SetI | ASST | 6 cut(s) | 14, 24, 58, 153, 213, 329 |
| Sse9I | AATT | 3 cut(s) | 87, 179, 282 |
| SsiI | CCGC | 1 cut(s) | 333 |
| SspMI | CTAG | 1 cut(s) | 57 |
| TasI | AATT | 3 cut(s) | 87, 179, 282 |
| TseFI | GTSAC | 1 cut(s) | 119 |
| TseI | GCWGC | 2 cut(s) | 110, 266 |
| Tsp45I | GTSAC | 1 cut(s) | 119 |
| XapI | RAATTY | 1 cut(s) | 87 |
| XmiI | GTMKAC | 1 cut(s) | 278 |
| XmnI | GAANNNNTTC | 1 cut(s) | 344 |
| XspI | CTAG | 1 cut(s) | 57 |