Autophagy-related protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G04620 AT4G04620 AT4G04620 AT4G21980 AT4G21980 |
| fragaria_vesca | FvH4_3g01980 FvH4_3g01980 |
| malus_domestica | MD05G1347700.v1.1 MD10G1322100.v1.1 |
| prunus_persica | Prupe.4G019800_v2.0.a1 Prupe.4G019800_v2.0.a1 |
| pyrus_communis | pycom05g31530 pycom10g27260 |
| rosa_chinensis | RchiOBHm_Chr5g0002891 |
| rosa_laevigata | RLG00000031067 |
| rosa_multiflora | Rmu_sc0020722.1_g000004 |
| rosa_roxburghii | Rroxscaffold_1G00072970 |
| rosa_rugosa | Rorug04G0400400 |
| rosa_samantha | Rh5AG023100 Rh5BG026000 Rh5DG024500 |
| rosa_wichuraiana | Rw5G002180 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 186 |
| AclWI | GGATC | 1 cut(s) | 358 |
| AcsI | RAATTY | 1 cut(s) | 87 |
| AfaI | GTAC | 2 cut(s) | 77, 156 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 37 |
| AgsI | TTSAA | 1 cut(s) | 19 |
| AluBI | AGCT | 4 cut(s) | 161, 211, 218, 227 |
| AluI | AGCT | 4 cut(s) | 161, 211, 218, 227 |
| AlwI | GGATC | 1 cut(s) | 358 |
| Ama87I | CYCGRG | 1 cut(s) | 35 |
| ApeKI | GCWGC | 1 cut(s) | 266 |
| ApoI | RAATTY | 1 cut(s) | 87 |
| AvaI | CYCGRG | 1 cut(s) | 35 |
| BbvI | GCAGC | 1 cut(s) | 253 |
| BccI | CCATC | 1 cut(s) | 302 |
| BglII | AGATCT | 1 cut(s) | 21 |
| BisI | GCNGC | 1 cut(s) | 267 |
| BlsI | GCNGC | 1 cut(s) | 268 |
| BmeT110I | CYCGRG | 1 cut(s) | 35 |
| BmiI | GGNNCC | 1 cut(s) | 314 |
| BsaAI | YACGTR | 1 cut(s) | 190 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 241, 271 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 37 |
| Bse3DI | GCAATG | 1 cut(s) | 251 |
| BseGI | GGATG | 2 cut(s) | 51, 313 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 37 |
| BseMI | GCAATG | 1 cut(s) | 251 |
| BseMII | CTCAG | 1 cut(s) | 210 |
| BseXI | GCAGC | 1 cut(s) | 253 |
| BsiHKCI | CYCGRG | 1 cut(s) | 35 |
| BslFI | GGGAC | 1 cut(s) | 189 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 37 |
| BsmFI | GGGAC | 1 cut(s) | 189 |
| BsoBI | CYCGRG | 1 cut(s) | 35 |
| Bsp143I | GATC | 4 cut(s) | 21, 163, 282, 350 |
| BspCNI | CTCAG | 1 cut(s) | 211 |
| BspLI | GGNNCC | 1 cut(s) | 314 |
| BspPI | GGATC | 1 cut(s) | 358 |
| BsrDI | GCAATG | 1 cut(s) | 251 |
| BssMI | GATC | 4 cut(s) | 21, 163, 282, 350 |
| BssNAI | GTATAC | 1 cut(s) | 187 |
| Bst1107I | GTATAC | 1 cut(s) | 187 |
| Bst4CI | ACNGT | 3 cut(s) | 172, 332, 361 |
| BstBAI | YACGTR | 1 cut(s) | 190 |
| BstDEI | CTNAG | 2 cut(s) | 6, 219 |
| BstF5I | GGATG | 2 cut(s) | 51, 313 |
| BstKTI | GATC | 4 cut(s) | 24, 166, 285, 353 |
| BstMBI | GATC | 4 cut(s) | 21, 163, 282, 350 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 224 |
| BstV1I | GCAGC | 1 cut(s) | 253 |
| BstX2I | RGATCY | 2 cut(s) | 21, 350 |
| BstYI | RGATCY | 2 cut(s) | 21, 350 |
| BstZ17I | GTATAC | 1 cut(s) | 187 |
| BtsCI | GGATG | 2 cut(s) | 51, 313 |
| BtsIMutI | CAGTG | 2 cut(s) | 177, 337 |
| Csp6I | GTAC | 2 cut(s) | 76, 155 |
| CviAII | CATG | 1 cut(s) | 322 |
| CviJI | RGCY | 6 cut(s) | 5, 110, 161, 211, 218, 227 |
| CviKI_1 | RGCY | 6 cut(s) | 5, 110, 161, 211, 218, 227 |
| CviQI | GTAC | 2 cut(s) | 76, 155 |
| DdeI | CTNAG | 2 cut(s) | 6, 219 |
| DpnI | GATC | 4 cut(s) | 23, 165, 284, 352 |
| DpnII | GATC | 4 cut(s) | 21, 163, 282, 350 |
| Eco88I | CYCGRG | 1 cut(s) | 35 |
| EcoRI | GAATTC | 1 cut(s) | 87 |
| FaeI | CATG | 1 cut(s) | 325 |
| FaiI | YATR | 3 cut(s) | 187, 288, 323 |
| FalI | AAGNNNNNCTT | 1 cut(s) | 31 |
| FaqI | GGGAC | 1 cut(s) | 189 |
| FatI | CATG | 1 cut(s) | 321 |
| FblI | GTMKAC | 1 cut(s) | 186 |
| Fnu4HI | GCNGC | 1 cut(s) | 267 |
| FokI | GGATG | 2 cut(s) | 58, 320 |
| Fsp4HI | GCNGC | 1 cut(s) | 267 |
| GluI | GCNGC | 1 cut(s) | 267 |
| Hin1II | CATG | 1 cut(s) | 325 |
| HindIII | AAGCTT | 1 cut(s) | 209 |
| HinfI | GANTC | 3 cut(s) | 53, 63, 204 |
| Hpy166II | GTNNAC | 1 cut(s) | 187 |
| Hpy188I | TCNGA | 1 cut(s) | 68 |
| Hpy188III | TCNNGA | 4 cut(s) | 19, 35, 60, 128 |
| Hpy8I | GTNNAC | 1 cut(s) | 187 |
| HpyAV | CCTTC | 2 cut(s) | 25, 100 |
| HpyCH4III | ACNGT | 3 cut(s) | 172, 332, 361 |
| HpyCH4IV | ACGT | 1 cut(s) | 189 |
| HpyCH4V | TGCA | 1 cut(s) | 269 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 224 |
| HpyF3I | CTNAG | 2 cut(s) | 6, 219 |
| HpySE526I | ACGT | 1 cut(s) | 189 |
| Hsp92II | CATG | 1 cut(s) | 325 |
| Kzo9I | GATC | 4 cut(s) | 21, 163, 282, 350 |
| LmnI | GCTCC | 1 cut(s) | 215 |
| LpnPI | CCDG | 4 cut(s) | 93, 96, 141, 171 |
| Lsp1109I | GCAGC | 1 cut(s) | 253 |
| MaeII | ACGT | 1 cut(s) | 189 |
| MalI | GATC | 4 cut(s) | 23, 165, 284, 352 |
| MboI | GATC | 4 cut(s) | 21, 163, 282, 350 |
| MboII | GAAGA | 3 cut(s) | 48, 154, 302 |
| MflI | RGATCY | 2 cut(s) | 21, 350 |
| MluCI | AATT | 2 cut(s) | 87, 179 |
| MmeI | TCCRAC | 1 cut(s) | 284 |
| MnlI | CCTC | 5 cut(s) | 31, 42, 267, 298, 326 |
| MseI | TTAA | 1 cut(s) | 243 |
| MslI | CAYNNNNRTG | 1 cut(s) | 300 |
| MspA1I | CMGCKG | 1 cut(s) | 161 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 224 |
| NdeII | GATC | 4 cut(s) | 21, 163, 282, 350 |
| NlaIII | CATG | 1 cut(s) | 325 |
| NlaIV | GGNNCC | 1 cut(s) | 314 |
| PaeR7I | CTCGAG | 1 cut(s) | 35 |
| PfeI | GAWTC | 3 cut(s) | 53, 63, 204 |
| PkrI | GCNGC | 1 cut(s) | 268 |
| Ppu21I | YACGTR | 1 cut(s) | 190 |
| PspN4I | GGNNCC | 1 cut(s) | 314 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 177, 209 |
| PsuI | RGATCY | 2 cut(s) | 21, 350 |
| PvuII | CAGCTG | 1 cut(s) | 161 |
| RsaI | GTAC | 2 cut(s) | 77, 156 |
| RsaNI | GTAC | 2 cut(s) | 76, 155 |
| RseI | CAYNNNNRTG | 1 cut(s) | 300 |
| SaqAI | TTAA | 1 cut(s) | 243 |
| SatI | GCNGC | 1 cut(s) | 267 |
| Sau3AI | GATC | 4 cut(s) | 21, 163, 282, 350 |
| SetI | ASST | 5 cut(s) | 163, 192, 213, 220, 229 |
| Sfr274I | CTCGAG | 1 cut(s) | 35 |
| SlaI | CTCGAG | 1 cut(s) | 35 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 300 |
| SmlI | CTYRAG | 1 cut(s) | 35 |
| SmoI | CTYRAG | 1 cut(s) | 35 |
| Sse9I | AATT | 2 cut(s) | 87, 179 |
| TaaI | ACNGT | 3 cut(s) | 172, 332, 361 |
| TaiI | ACGT | 1 cut(s) | 192 |
| TaqI | TCGA | 2 cut(s) | 36, 61 |
| TasI | AATT | 2 cut(s) | 87, 179 |
| TfiI | GAWTC | 3 cut(s) | 53, 63, 204 |
| Tru1I | TTAA | 1 cut(s) | 243 |
| Tru9I | TTAA | 1 cut(s) | 243 |
| TscAI | CASTG | 2 cut(s) | 177, 337 |
| TseI | GCWGC | 1 cut(s) | 266 |
| TspDTI | ATGAA | 1 cut(s) | 303 |
| TspRI | CASTG | 2 cut(s) | 177, 337 |
| XapI | RAATTY | 1 cut(s) | 87 |
| XhoI | CTCGAG | 1 cut(s) | 35 |
| XmiI | GTMKAC | 1 cut(s) | 186 |