Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0014571

Physical Location & Seq

Genomic Coordinates Forward (+)

6656374 .. 6659265

Gene Structure 2892 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT4G10840.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1830 bp

ATGCCAGCAATGCCAGGTCTCGTCTCAGTCAAAACTCCTTCCGATACACCGCCGCTACGTGTAGCCGTACCAGACACGCAACCTCTCTCAAACCCGCCGCGAACTCCGATGAAGAAAACCCCTTCCTCTACACCATCTCGATCCAAACCATCACCAAATAGATCCACCGGCAAAAAAGATTCCCCAACCGTATCCTCCTCCACCGCAGCCGTAATCGACGTCGACGATCCATCTCTAGATAATCCAGATCTCGGTCCTTTCCTTCTAAAATTAGCTCGTGACGCTATTGCTTCTGGTGAAGGTCCTAACAAAGCATTAGATTACGCGATCCGAGCAACTAAGTCCTTTGAGAGATGTTGCGCCGCCGTTGCTCCGCCTATTCCCGGTGGTAGCGATGGTGGACCTGTTCTTGATCTCGCTATGAGCCTTCATGTTCTCGCTGCTATTTACTGTAGTCTCGGCCGATTTGATGAAGCTGTACCACCTCTTGAACGAGCTATTCAAGTCCCTGATCCGACTCGTGGCCCTGACCACTCTCTCGCTGCGTTTTCTGGTCATATGCAACTTGGTGATACGTTGTCTATGCTTGGTCAGATTGATAGATCTATTGCTTGTTATGAAGAAGGTCTTAAGATCCAGATCCAGACTTTGGGTGATACTGATCCACGAGTTGGTGAAACTTGCAGGTACTTAGCAGAAGCATATGTTCAAGCAATGCAGTTCAATAAAGCGGAAGAGTTATGCAAGAAGACTCTAGAGATTCACCGAGCGCATAGTGAACCTGCTTCACTGGAGGAAGCAGCTGATAGGAGATTGATGGCAATTATCTGCGAGGCTAAAGGAGATTATGAAAACGCTCTTGAGCATCTTGTTCTTGCTAGTATGGCTATGATTGCGAGTGGACAAGAATCTGAGGTTGCATCGATTGATGTTAGTATTGGGAATATTTACATGTCGCTGTGCCGGTTTGATGAAGCTGTGTTTTCATATCAGAAGGCTCTTACTGTGTTTAAGGCTTCTAAAGGAGAGACTCATCCGACGGTTGCGTCAGTGTTTGTTAGATTGGCTGAGCTTTACCATAGAACAGGGAAACTTCGTGAGTCTAAGTCTTACTGTGAGAATGCGTTGAGGATATACAATAAGCCGGTGCCTGGGACAACTGTGGAGGAGATTGCTGGTGGATTAACTGAGATTTCTGCTATTTATGAGTCTGTAGATGAACCTGAGGAAGCATTGAAGCTACTTCAGAAGTCTATGAAATTGCTTGAGGATAAGCCAGGACAGCAGAGCGCCATTGCAGGGTTAGAGGCACGGATGGGAGTTATGTATTACACAGTGGGGAGGTACGAGGACGCAAGAAACGCGTTTGAGAGCGCTGTGACAAAGCTACGGGCAGCAGGTGAGAAATCTGCCTTCTTCGGTGTTGTATTAAACCAGATGGGACTAGCCTGCGTTCAGCTTTTCAAGATTGATGAAGCGGGTGAGCTGTTTGAAGAAGCAAGAGGTATTCTTGAACAAGAACGTGGACCGTGCGATCAGGACACTCTCGGTGTTTATAGCAATCTAGCTGCTACCTATGACGCTATGGGAAGGATAGAGGATGCGATTGAGATATTAGAGCAGGTTCTGAAGCTGAGAGAGGAAAAGCTCGGGACTGCGAATCCGGATTTTGAAGACGAGAAGAAACGTTTGGCCGAGCTTTTGAAGGAAGCTGGGCGGTCGCGGAACTACAAAGCCAAGTCGCTCCAGAATCTGATTGATCCAAATGCAAGACCTCCGAAGAAAGAGTCTTCTGCTAAGAAATGGCCCAGCCTCGGTTTCAAGTTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002009 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005856 GO:0005874 GO:0005886 GO:0005929 GO:0006996 GO:0007275 GO:0007369 GO:0008150 GO:0009653 GO:0009790 GO:0009888 GO:0009966 GO:0009968 GO:0009987 GO:0010646 GO:0010648 GO:0015630 GO:0016020 GO:0016043 GO:0022603 GO:0022607 GO:0023051 GO:0023057 GO:0030030 GO:0030031 GO:0030111 GO:0030178 GO:0032501 GO:0032502 GO:0042995 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0044085 GO:0044422 GO:0044424 GO:0044430 GO:0044446 GO:0044464 GO:0044782 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0048598 GO:0048729 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0051239 GO:0060026 GO:0060027 GO:0060271 GO:0060429 GO:0060828 GO:0065007 GO:0070925 GO:0071840 GO:0071944 GO:0090090 GO:0090175 GO:0099080 GO:0099081 GO:0099512 GO:0099513 GO:0120025 GO:0120031 GO:0120036 GO:1905330 GO:2000026 GO:2000027 GO:2000050 GO:2000095

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

TPR_10 TPR_12 TPR_8

Protein Analysis

609

Amino Acids

66.28

Weight (kDa)

5.34

Isoelectric Point (pI)

41.25

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TPR_12	PF13424	139 - 213	3.7e-08	Tetratricopeptide repeat
TPR_MalT	PF17874	144 - 296	8.6e-09	MalT-like TPR region
TPR_12	PF13424	187 - 256	8.3e-08	Tetratricopeptide repeat
TPR_12	PF13424	230 - 290	1.6e-06	Tetratricopeptide repeat
SNAP	PF14938	232 - 368	3.5e-06	Soluble NSF attachment protein, SNAP
TPR_MalT	PF17874	278 - 423	5.2e-08	MalT-like TPR region
TPR_NPHP3	PF24885	301 - 427	3.8e-09	Nephrocystin-3 TPR domain
TPR_12	PF13424	306 - 381	5.3e-11	Tetratricopeptide repeat
TPR_12	PF13424	476 - 548	2.4e-11	Tetratricopeptide repeat
TPR_10	PF13374	515 - 556	1e-08	Tetratricopeptide repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014571)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G10840
fragaria_vesca	FvH4_5g11550 FvH4_5g11550 FvH4_5g11550
malus_domestica	MD06G1112100.v1.1 MD14G1133500.v1.1
prunus_persica	Prupe.5G125200_v2.0.a1
pyrus_communis	pycom06g10510
rosa_chinensis	RchiOBHm_Chr7g0186201
rosa_laevigata	RLG00000004856
rosa_multiflora	Rmu_sc0002609.1_g000006
rosa_roxburghii	Rroxscaffold_3G00268320
rosa_rugosa	Rorug06G0472700
rosa_samantha	Rh7BG084400 Rh7CG079400 Rh7DG079900
rosa_wichuraiana	Rw7G006640

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1388
AasI	GACNNNNNNGTC	1 cut(s)	1045
AatII	GACGTC	1 cut(s)	222
Acc36I	ACCTGC	4 cut(s)	675, 790, 1388, 1612
AccB1I	GGYRCC	1 cut(s)	1147
AccB7I	CCANNNNNTGG	2 cut(s)	649, 671
AccI	GTMKAC	1 cut(s)	222
AccII	CGCG	4 cut(s)	100, 326, 1364, 1723
AccIII	TCCGGA	1 cut(s)	1663
AclI	AACGTT	1 cut(s)	1687
AclWI	GGATC	9 cut(s)	135, 156, 221, 322, 506, 628, 634, 656, 1754
AcoI	YGGCCR	2 cut(s)	460, 1692
AcuI	CTGAAG	2 cut(s)	1229, 1649
AcyI	GRCGYC	1 cut(s)	219
AfaI	GTAC	4 cut(s)	69, 480, 689, 1346
AfeI	AGCGCT	1 cut(s)	1375
AfiI	CCNNNNNNNGG	8 cut(s)	251, 383, 521, 649, 671, 1151, 1299, 1814
AflII	CTTAAG	1 cut(s)	629
AflIII	ACRYGT	3 cut(s)	58, 951, 1362
AjnI	CCWGG	3 cut(s)	13, 1150, 1276
AjuI	GAANNNNNNNTTGG	2 cut(s)	1673, 1705
Alw26I	GTCTC	4 cut(s)	23, 28, 461, 1022
AlwI	GGATC	9 cut(s)	135, 156, 221, 322, 506, 628, 634, 656, 1754
AlwNI	CAGNNNCTG	2 cut(s)	1627, 1753
Ama87I	CYCGRG	1 cut(s)	1649
Aor13HI	TCCGGA	1 cut(s)	1663
Aor51HI	AGCGCT	1 cut(s)	1375
AoxI	GGCC	4 cut(s)	460, 523, 1692, 1805
ApeKI	GCWGC	6 cut(s)	206, 440, 542, 800, 1394, 1568
ArsI	GACNNNNNNTTYG	2 cut(s)	1772, 1804
AspLEI	GCGC	4 cut(s)	362, 772, 1292, 1376
AspS9I	GGNCC	6 cut(s)	254, 302, 401, 524, 1526, 1806
AsuC2I	CCSGG	1 cut(s)	384
AsuHPI	GGTGA	8 cut(s)	144, 308, 581, 665, 686, 755, 1412, 1493
AvaI	CYCGRG	1 cut(s)	1649
AvaII	GGWCC	4 cut(s)	254, 302, 401, 1526
AxyI	CCTNAGG	1 cut(s)	1224
BanI	GGYRCC	1 cut(s)	1147
BauI	CACGAG	3 cut(s)	276, 519, 666
BbsI	GAAGAC	3 cut(s)	755, 1680, 1782
BbvI	GCAGC	6 cut(s)	218, 427, 529, 812, 1406, 1555
BccI	CCATC	7 cut(s)	142, 157, 238, 389, 811, 1309, 1432
BceAI	ACGGC	3 cut(s)	50, 194, 350
BciT130I	CCWGG	3 cut(s)	15, 1152, 1278
BciVI	GTATCC	1 cut(s)	202
BcnI	CCSGG	1 cut(s)	384
BcoDI	GTCTC	4 cut(s)	23, 28, 461, 1022
BfaI	CTAG	5 cut(s)	236, 755, 879, 1445, 1565
BfmI	CTRYAG	2 cut(s)	451, 1212
BfoI	RGCGCY	2 cut(s)	1293, 1377
BfrI	CTTAAG	1 cut(s)	629
BfuAI	ACCTGC	4 cut(s)	675, 790, 1388, 1612
BfuI	GTATCC	1 cut(s)	202
BglII	AGATCT	2 cut(s)	247, 602
BisI	GCNGC	9 cut(s)	53, 98, 207, 363, 441, 543, 801, 1395, 1569
BlpI	GCTNAGC	1 cut(s)	1068
BlsI	GCNGC	9 cut(s)	54, 99, 208, 364, 442, 544, 802, 1396, 1570
Bme1390I	CCNGG	4 cut(s)	15, 384, 1152, 1278
Bme18I	GGWCC	4 cut(s)	254, 302, 401, 1526
BmeT110I	CYCGRG	1 cut(s)	1649
BmgT120I	GGNCC	6 cut(s)	254, 302, 401, 524, 1526, 1806
BmiI	GGNNCC	1 cut(s)	1149
BmrFI	CCNGG	4 cut(s)	15, 384, 1152, 1278
BmsI	GCATC	3 cut(s)	874, 929, 1591
BpiI	GAAGAC	3 cut(s)	755, 1680, 1782
BpmI	CTGGAG	2 cut(s)	812, 1730
Bpu1102I	GCTNAGC	1 cut(s)	1068
BpuEI	CTTGAG	2 cut(s)	881, 1286
BpuMI	CCSGG	1 cut(s)	384
Bsa29I	ATCGAT	1 cut(s)	923
BsaAI	YACGTR	1 cut(s)	59
BsaBI	GATNNNNATC	2 cut(s)	638, 660
BsaHI	GRCGYC	1 cut(s)	219
BsaI	GGTCTC	1 cut(s)	23
BsaJI	CCNNGG	2 cut(s)	1151, 1813
BsaWI	WCCGGW	1 cut(s)	1663
Bsc4I	CCNNNNNNNGG	8 cut(s)	251, 383, 521, 649, 671, 1151, 1299, 1814
Bse118I	RCCGGY	3 cut(s)	167, 963, 1144
Bse1I	ACTGG	1 cut(s)	795
Bse21I	CCTNAGG	1 cut(s)	1224
Bse3DI	GCAATG	3 cut(s)	15, 720, 1293
Bse8I	GATNNNNATC	2 cut(s)	638, 660
BseAI	TCCGGA	1 cut(s)	1663
BseBI	CCWGG	3 cut(s)	15, 1152, 1278
BseCI	ATCGAT	1 cut(s)	923
BseDI	CCNNGG	2 cut(s)	1151, 1813
BseGI	GGATG	3 cut(s)	1033, 1320, 1606
BseJI	GATNNNNATC	2 cut(s)	638, 660
BseLI	CCNNNNNNNGG	8 cut(s)	251, 383, 521, 649, 671, 1151, 1299, 1814
BseMI	GCAATG	3 cut(s)	15, 720, 1293
BseMII	CTCAG	6 cut(s)	39, 903, 1059, 1179, 1215, 1625
BseNI	ACTGG	1 cut(s)	795
BseRI	GAGGAG	2 cut(s)	187, 1181
BseX3I	CGGCCG	1 cut(s)	460
BseXI	GCAGC	6 cut(s)	218, 427, 529, 812, 1406, 1555
BseYI	CCCAGC	2 cut(s)	1712, 1808
Bsh1236I	CGCG	4 cut(s)	100, 326, 1364, 1723
Bsh1285I	CGRYCG	2 cut(s)	463, 1721
BshFI	GGCC	4 cut(s)	462, 525, 1694, 1807
BshNI	GGYRCC	1 cut(s)	1147
BshVI	ATCGAT	1 cut(s)	923
BsiEI	CGRYCG	2 cut(s)	463, 1721
BsiHKCI	CYCGRG	1 cut(s)	1649
BsiSI	CCGG	5 cut(s)	168, 384, 964, 1145, 1664
BslFI	GGGAC	4 cut(s)	491, 1168, 1455, 1666
BslI	CCNNNNNNNGG	8 cut(s)	251, 383, 521, 649, 671, 1151, 1299, 1814
BsmAI	GTCTC	4 cut(s)	23, 28, 461, 1022
BsmBI	CGTCTC	1 cut(s)	28
BsmFI	GGGAC	4 cut(s)	491, 1168, 1455, 1666
BsmI	GAATGC	1 cut(s)	1126
BsnI	GGCC	4 cut(s)	462, 525, 1694, 1807
Bso31I	GGTCTC	1 cut(s)	23
BsoBI	CYCGRG	1 cut(s)	1649
Bsp13I	TCCGGA	1 cut(s)	1663
Bsp1720I	GCTNAGC	1 cut(s)	1068
BspANI	GGCC	4 cut(s)	462, 525, 1694, 1807
BspCNI	CTCAG	6 cut(s)	38, 904, 1060, 1180, 1216, 1626
BspDI	ATCGAT	1 cut(s)	923
BspEI	TCCGGA	1 cut(s)	1663
BspFNI	CGCG	4 cut(s)	100, 326, 1364, 1723
BspLI	GGNNCC	1 cut(s)	1149
BspMI	ACCTGC	4 cut(s)	675, 790, 1388, 1612
BspPI	GGATC	9 cut(s)	135, 156, 221, 322, 506, 628, 634, 656, 1754
BspT107I	GGYRCC	1 cut(s)	1147
BspTI	CTTAAG	1 cut(s)	629
BspTNI	GGTCTC	1 cut(s)	23
BsrDI	GCAATG	3 cut(s)	15, 720, 1293
BsrFI	RCCGGY	3 cut(s)	167, 963, 1144
BsrI	ACTGG	1 cut(s)	795
BssAI	RCCGGY	3 cut(s)	167, 963, 1144
BssECI	CCNNGG	2 cut(s)	1151, 1813
BssNI	GRCGYC	1 cut(s)	219
BssSI	CACGAG	3 cut(s)	276, 519, 666
Bst2BI	CACGAG	3 cut(s)	276, 519, 666
Bst2UI	CCWGG	3 cut(s)	15, 1152, 1278
Bst4CI	ACNGT	8 cut(s)	190, 452, 1006, 1042, 1115, 1162, 1336, 1530
Bst6I	CTCTTC	1 cut(s)	729
BstACI	GRCGYC	1 cut(s)	219
BstAFI	CTTAAG	1 cut(s)	629
BstBAI	YACGTR	1 cut(s)	59
BstC8I	GCNNGC	2 cut(s)	6, 1450
BstF5I	GGATG	3 cut(s)	1033, 1320, 1606
BstFNI	CGCG	4 cut(s)	100, 326, 1364, 1723
BstH2I	RGCGCY	2 cut(s)	1293, 1377
BstHHI	GCGC	4 cut(s)	362, 772, 1292, 1376
BstMAI	GTCTC	4 cut(s)	23, 28, 461, 1022
BstMCI	CGRYCG	2 cut(s)	463, 1721
BstMWI	GCNNNNNNNGC	8 cut(s)	10, 281, 332, 368, 884, 893, 1282, 1361
BstNI	CCWGG	3 cut(s)	15, 1152, 1278
BstNSI	RCATGY	1 cut(s)	955
BstSCI	CCNGG	4 cut(s)	13, 382, 1150, 1276
BstSFI	CTRYAG	2 cut(s)	451, 1212
BstUI	CGCG	4 cut(s)	100, 326, 1364, 1723
BstV1I	GCAGC	6 cut(s)	218, 427, 529, 812, 1406, 1555
BstV2I	GAAGAC	3 cut(s)	755, 1680, 1782
BstX2I	RGATCY	5 cut(s)	161, 247, 602, 633, 639
BstYI	RGATCY	5 cut(s)	161, 247, 602, 633, 639
BstZI	CGGCCG	1 cut(s)	460
Bsu15I	ATCGAT	1 cut(s)	923
Bsu36I	CCTNAGG	1 cut(s)	1224
BsuI	GTATCC	1 cut(s)	202
BsuRI	GGCC	4 cut(s)	462, 525, 1694, 1807
BsuTUI	ATCGAT	1 cut(s)	923
BtgZI	GCGATG	1 cut(s)	408
BtsCI	GGATG	3 cut(s)	1033, 1320, 1606
BtsIMutI	CAGTG	3 cut(s)	788, 1056, 1341
BveI	ACCTGC	4 cut(s)	675, 790, 1388, 1612
Cac8I	GCNNGC	2 cut(s)	6, 1450
CaiI	CAGNNNCTG	2 cut(s)	1627, 1753
CfoI	GCGC	4 cut(s)	362, 772, 1292, 1376
Cfr10I	RCCGGY	3 cut(s)	167, 963, 1144
Cfr13I	GGNCC	6 cut(s)	254, 302, 401, 524, 1526, 1806
ClaI	ATCGAT	1 cut(s)	923
CseI	GACGC	4 cut(s)	290, 1035, 1361, 1589
Csp6I	GTAC	4 cut(s)	68, 479, 688, 1345
CviAII	CATG	2 cut(s)	431, 952
CviQI	GTAC	4 cut(s)	68, 479, 688, 1345
DrdI	GACNNNNNNGTC	1 cut(s)	1045
DseDI	GACNNNNNNGTC	1 cut(s)	1045
EaeI	YGGCCR	2 cut(s)	460, 1692
EagI	CGGCCG	1 cut(s)	460
Eam1104I	CTCTTC	1 cut(s)	729
EarI	CTCTTC	1 cut(s)	729
EciI	GGCGGA	1 cut(s)	363
EclXI	CGGCCG	1 cut(s)	460
Eco31I	GGTCTC	1 cut(s)	23
Eco47I	GGWCC	4 cut(s)	254, 302, 401, 1526
Eco47III	AGCGCT	1 cut(s)	1375
Eco52I	CGGCCG	1 cut(s)	460
Eco57I	CTGAAG	2 cut(s)	1229, 1649
Eco81I	CCTNAGG	1 cut(s)	1224
Eco88I	CYCGRG	1 cut(s)	1649
EcoO109I	RGGNCCY	1 cut(s)	302
EcoRII	CCWGG	3 cut(s)	13, 1150, 1276
Esp3I	CGTCTC	1 cut(s)	28
FaeI	CATG	2 cut(s)	434, 955
FalI	AAGNNNNNCTT	2 cut(s)	612, 644
FaqI	GGGAC	4 cut(s)	491, 1168, 1455, 1666
FatI	CATG	2 cut(s)	430, 951
FauI	CCCGC	2 cut(s)	102, 1471
FauNDI	CATATG	2 cut(s)	558, 703
FblI	GTMKAC	1 cut(s)	222
Fnu4HI	GCNGC	9 cut(s)	53, 98, 207, 363, 441, 543, 801, 1395, 1569
FokI	GGATG	3 cut(s)	1020, 1327, 1613
Fsp4HI	GCNGC	9 cut(s)	53, 98, 207, 363, 441, 543, 801, 1395, 1569
FspBI	CTAG	5 cut(s)	236, 755, 879, 1445, 1565
GlaI	GCGC	4 cut(s)	361, 771, 1291, 1375
GluI	GCNGC	9 cut(s)	53, 98, 207, 363, 441, 543, 801, 1395, 1569
GsaI	CCCAGC	2 cut(s)	1716, 1812
GsuI	CTGGAG	2 cut(s)	812, 1730
HaeII	RGCGCY	2 cut(s)	1293, 1377
HaeIII	GGCC	4 cut(s)	462, 525, 1694, 1807
HapII	CCGG	5 cut(s)	168, 384, 964, 1145, 1664
HgaI	GACGC	4 cut(s)	290, 1035, 1361, 1589
HhaI	GCGC	4 cut(s)	362, 772, 1292, 1376
Hin1I	GRCGYC	1 cut(s)	219
Hin1II	CATG	2 cut(s)	434, 955
Hin6I	GCGC	4 cut(s)	360, 770, 1290, 1374
HinP1I	GCGC	4 cut(s)	360, 770, 1290, 1374
HincII	GTYRAC	1 cut(s)	223
HindII	GTYRAC	1 cut(s)	223
HpaII	CCGG	5 cut(s)	168, 384, 964, 1145, 1664
HphI	GGTGA	8 cut(s)	144, 308, 581, 665, 686, 755, 1412, 1493
Hpy166II	GTNNAC	5 cut(s)	223, 401, 779, 902, 1526
Hpy8I	GTNNAC	5 cut(s)	223, 401, 779, 902, 1526
Hpy99I	CGWCG	4 cut(s)	221, 224, 227, 1042
HpyCH4III	ACNGT	8 cut(s)	190, 452, 1006, 1042, 1115, 1162, 1336, 1530
HpyCH4IV	ACGT	5 cut(s)	58, 219, 575, 1522, 1687
HpyCH4V	TGCA	7 cut(s)	562, 684, 718, 744, 920, 1298, 1769
HpyF10VI	GCNNNNNNNGC	8 cut(s)	10, 281, 332, 368, 884, 893, 1282, 1361
HpySE526I	ACGT	5 cut(s)	58, 219, 575, 1522, 1687
Hsp92I	GRCGYC	1 cut(s)	219
Hsp92II	CATG	2 cut(s)	434, 955
HspAI	GCGC	4 cut(s)	360, 770, 1290, 1374
Kpn2I	TCCGGA	1 cut(s)	1663
LmnI	GCTCC	2 cut(s)	376, 1749
Lsp1109I	GCAGC	6 cut(s)	218, 427, 529, 812, 1406, 1555
LweI	GCATC	3 cut(s)	874, 929, 1591
MaeI	CTAG	5 cut(s)	236, 755, 879, 1445, 1565
MaeII	ACGT	5 cut(s)	58, 219, 575, 1522, 1687
MaeIII	GTNAC	2 cut(s)	278, 1378
MflI	RGATCY	5 cut(s)	161, 247, 602, 633, 639
MluCI	AATT	3 cut(s)	269, 822, 1259
MluI	ACGCGT	1 cut(s)	1362
MlyI	GAGTC	6 cut(s)	511, 745, 1024, 1109, 1217, 1796
MmeI	TCCRAC	2 cut(s)	539, 1061
MroI	TCCGGA	1 cut(s)	1663
MseI	TTAA	4 cut(s)	630, 1011, 1184, 1430
MspA1I	CMGCKG	1 cut(s)	803
MspCI	CTTAAG	1 cut(s)	629
MspI	CCGG	5 cut(s)	168, 384, 964, 1145, 1664
MspR9I	CCNGG	4 cut(s)	15, 384, 1152, 1278
Mva1269I	GAATGC	1 cut(s)	1126
MvaI	CCWGG	3 cut(s)	15, 1152, 1278
MvnI	CGCG	4 cut(s)	100, 326, 1364, 1723
MwoI	GCNNNNNNNGC	8 cut(s)	10, 281, 332, 368, 884, 893, 1282, 1361
NciI	CCSGG	1 cut(s)	384
NdeI	CATATG	2 cut(s)	558, 703
NlaIII	CATG	2 cut(s)	434, 955
NlaIV	GGNNCC	1 cut(s)	1149
NmeAIII	GCCGAG	2 cut(s)	438, 1720
NmuCI	GTSAC	2 cut(s)	278, 1378
NspI	RCATGY	1 cut(s)	955
PaqCI	CACCTGC	1 cut(s)	1388
PciI	ACATGT	1 cut(s)	951
PcsI	WCGNNNNNNNCGW	1 cut(s)	222
PctI	GAATGC	1 cut(s)	1126
PfeI	GAWTC	5 cut(s)	179, 760, 908, 1660, 1750
PflMI	CCANNNNNTGG	2 cut(s)	649, 671
PkrI	GCNGC	9 cut(s)	54, 99, 208, 364, 442, 544, 802, 1396, 1570
PleI	GAGTC	6 cut(s)	511, 745, 1024, 1108, 1216, 1795
PpsI	GAGTC	6 cut(s)	511, 745, 1024, 1108, 1216, 1795
Ppu21I	YACGTR	1 cut(s)	59
PpuMI	RGGWCCY	1 cut(s)	302
PscI	ACATGT	1 cut(s)	951
Psp1406I	AACGTT	1 cut(s)	1687
Psp5II	RGGWCCY	1 cut(s)	302
Psp6I	CCWGG	3 cut(s)	13, 1150, 1276
PspFI	CCCAGC	2 cut(s)	1712, 1808
PspGI	CCWGG	3 cut(s)	13, 1150, 1276
PspN4I	GGNNCC	1 cut(s)	1149
PspPI	GGNCC	6 cut(s)	254, 302, 401, 524, 1526, 1806
PspPPI	RGGWCCY	1 cut(s)	302
PstNI	CAGNNNCTG	2 cut(s)	1627, 1753
PsuI	RGATCY	5 cut(s)	161, 247, 602, 633, 639
PvuII	CAGCTG	1 cut(s)	803
RsaI	GTAC	4 cut(s)	69, 480, 689, 1346
RsaNI	GTAC	4 cut(s)	68, 479, 688, 1345
SalI	GTCGAC	1 cut(s)	221
SaqAI	TTAA	4 cut(s)	630, 1011, 1184, 1430
SatI	GCNGC	9 cut(s)	53, 98, 207, 363, 441, 543, 801, 1395, 1569
Sau96I	GGNCC	6 cut(s)	254, 302, 401, 524, 1526, 1806
SchI	GAGTC	6 cut(s)	511, 745, 1024, 1109, 1217, 1796
ScrFI	CCNGG	4 cut(s)	15, 384, 1152, 1278
SfaNI	GCATC	3 cut(s)	874, 929, 1591
SfcI	CTRYAG	2 cut(s)	451, 1212
SgrDI	CGTCGACG	1 cut(s)	221
SinI	GGWCC	4 cut(s)	254, 302, 401, 1526
SmlI	CTYRAG	3 cut(s)	629, 860, 1265
SmoI	CTYRAG	3 cut(s)	629, 860, 1265
Sse9I	AATT	3 cut(s)	269, 822, 1259
SspI	AATATT	1 cut(s)	946
SspMI	CTAG	5 cut(s)	236, 755, 879, 1445, 1565
StyD4I	CCNGG	4 cut(s)	13, 382, 1150, 1276
TaaI	ACNGT	8 cut(s)	190, 452, 1006, 1042, 1115, 1162, 1336, 1530
TaiI	ACGT	5 cut(s)	61, 222, 578, 1525, 1690
TaqI	TCGA	4 cut(s)	139, 216, 222, 923
TaqII	GACCGA	1 cut(s)	242
TasI	AATT	3 cut(s)	269, 822, 1259
TauI	GCSGC	3 cut(s)	55, 100, 365
TfiI	GAWTC	5 cut(s)	179, 760, 908, 1660, 1750
Tru1I	TTAA	4 cut(s)	630, 1011, 1184, 1430
Tru9I	TTAA	4 cut(s)	630, 1011, 1184, 1430
TscAI	CASTG	3 cut(s)	795, 1056, 1341
TseFI	GTSAC	2 cut(s)	278, 1378
TseI	GCWGC	6 cut(s)	206, 440, 542, 800, 1394, 1568
Tsp45I	GTSAC	2 cut(s)	278, 1378
TspGWI	ACGGA	1 cut(s)	1327
TspRI	CASTG	3 cut(s)	795, 1056, 1341
Van91I	CCANNNNNTGG	2 cut(s)	649, 671
Vha464I	CTTAAG	1 cut(s)	629
VpaK11BI	GGWCC	4 cut(s)	254, 302, 401, 1526
XbaI	TCTAGA	2 cut(s)	235, 754
XceI	RCATGY	1 cut(s)	955
XmiI	GTMKAC	1 cut(s)	222
XspI	CTAG	5 cut(s)	236, 755, 879, 1445, 1565
ZraI	GACGTC	1 cut(s)	220

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.