Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr06

Orthogroup ID

OG0014571

Physical Location & Seq

Genomic Coordinates Reverse (-)

25071934 .. 25075688

Gene Structure 3755 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD06G1112100.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1797 bp

ATGCCGGGTTTAGTCTCCGTCAAAACCCCGCCCGACTCCGCCCCGATCCGAATCACGGTCCCGGATCCCCAGCCCCAAAGATCCGAACCCGCCCCGGTTTCCAAAACCCCTTCGCCCCACACTAAAAAACCGCCGTCCCCGTCCCCTTCCCGATCCAAACCCTCGCCCGCCCGATCCAAAAAACCTCAACCCGTTTCACCGGACCCGATTCTTGCCGATGCCTCCCTCGACAACCCGGATCTCGGCCCGTTTCTGCTCAAGCTGGCTCGCGACACCATCGCCTCGGGGGAAGGACCGAACAAAGCGTTGGAGTATGCGGTCCGGGCGTCAAAGTCGTTCGAGCGGTGCGCGGTGGATGGCGAGCCGAGTCTGGACCTGGCAATGAGCTTGCACGTGCTGGCGGCGATTTACTGTAGCTTGGGCCGGTTCGAGGAGGCGGTTCCGGTTCTGGACCGGGCGATTCGGGTGCCAGAGATCGGAAGAGGTGCGGATCACGCGCTCGCTGCGTTCTCTGGGCACATGCAGCTCGGGGACACGTATTCAATGCTGGGTCAGGTGGACCGGTCCATTGAATGCTATGAGGAGGGATTGAAGATCCAGATCGAGGCCTTGGGCGACACTGATCCCAGAGTTGGCGAGACTTGCAGATATTTAGCTGAGGCACATGTCCAAGCAATGCAGTTTGATAGAGCAGAAGAATTGTGCAAGAAAACCCTTGAAATTCACCGTGCTCATAGTGAACCAGCATCTCTTGAAGAGTCAGCTGACCGCCGGCTGATGGCTCTCATATGCGAGGCAAAGGGAGATTATGAATCAGCACTTGAGCACCTTGTCCTTGCCAGCATGGCAATGATTGCAAATGGGCTAGACAATGAGGTTGCTGCTATTGATGTCAGCATAGGCAACATTTATATGTCTCTTTGTCGCTTTGATGAGGCTGTCTTCTCCTATCAGAAGGCACTCACCGTTTTAAAGGCATCAAAGGGCGACAACCATCCTTCTGTTGCCTCTGTGTTTGTACGCCTTGCTGACCTATATCATAGGACTGGAAAGCTCCGGGAGTCCAAATCATACTGTGAGAATGCCCTGAGGATATATGTGAAACCTGTGCCTGGAACAACATCAGAAGAGATTTCTGGTGGATTGACTGAAATTTCAGCCATTTATGAATCAATGGATGAGCCCGGGGAGGCACTTAAGTTATTGCAGAAAGCAATGAAGTTGTTAGAGGATAAACCAGGACAGCAAAGCACAATTGCTGGAATAGAAGCGCGGATGGGAGTGATGTTTTGCATGCTTGGGAGATATGAAGAAGCAAGGAACTCTTTTGAAAGCGCTGTAACAAAACTTAGAGCTAGTGGAGAGAAGAAGTCACCCTTCTTTGGGGTTGTATTGAACCAGATGGGTTTGGCTTGTGTTCAATTGTTCAAGATAGATGAGGCTGCTGAGTTGTTTGAAGAAGCGAGACGGATATTAGAACAAGAGTGTGGTCCTTGTCATCAGGATACTCTTGGAGTATATAGCAATCTTGCAGCAACCTATGATGCTATGGGGAGAGTTGAAGATGCAATTGAAATTCTGGAGTATGTCCTTAAATTGCGAGAAGAAAAGCTTGGAATTGCAAATCCGGATTTTGAAGATGAGAAGAGAAGGCTATCCGAGCTTCTAAAAGAAGCCGGTAGGACCCGAGACAGAAAAGCAAAGTCACTGGAAAACCTCATCGACACAAACTCGACCACGAAGAAGACAAAGAAAGAGGGGACAAAGAGGTGGGGTGGCTTGAGTTTCAAACTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002009 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005856 GO:0005874 GO:0005886 GO:0005929 GO:0006996 GO:0007275 GO:0007369 GO:0008150 GO:0009653 GO:0009790 GO:0009888 GO:0009966 GO:0009968 GO:0009987 GO:0010646 GO:0010648 GO:0015630 GO:0016020 GO:0016043 GO:0022603 GO:0022607 GO:0023051 GO:0023057 GO:0030030 GO:0030031 GO:0030111 GO:0030178 GO:0032501 GO:0032502 GO:0042995 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0044085 GO:0044422 GO:0044424 GO:0044430 GO:0044446 GO:0044464 GO:0044782 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0048598 GO:0048729 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0051239 GO:0060026 GO:0060027 GO:0060271 GO:0060429 GO:0060828 GO:0065007 GO:0070925 GO:0071840 GO:0071944 GO:0090090 GO:0090175 GO:0099080 GO:0099081 GO:0099512 GO:0099513 GO:0120025 GO:0120031 GO:0120036 GO:1905330 GO:2000026 GO:2000027 GO:2000050 GO:2000095

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

TPR_10 TPR_12 TPR_8

Protein Analysis

599

Amino Acids

65.63

Weight (kDa)

5.62

Isoelectric Point (pI)

48.67

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TPR_MalT	PF17874	131 - 283	4.3e-10	MalT-like TPR region
TPR_12	PF13424	174 - 243	5e-08	Tetratricopeptide repeat
TPR_12	PF13424	218 - 277	8.7e-06	Tetratricopeptide repeat
TPR_MalT	PF17874	260 - 439	1.7e-07	MalT-like TPR region
TPR_NPHP3	PF24885	291 - 416	3.9e-08	Nephrocystin-3 TPR domain
TPR_12	PF13424	293 - 366	7.5e-11	Tetratricopeptide repeat
TPR_12	PF13424	335 - 410	2.2e-08	Tetratricopeptide repeat
TPR_12	PF13424	422 - 494	5.3e-09	Tetratricopeptide repeat
TPR_12	PF13424	464 - 536	1.6e-10	Tetratricopeptide repeat
TPR_10	PF13374	503 - 544	2.4e-06	Tetratricopeptide repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014571)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G10840
fragaria_vesca	FvH4_5g11550 FvH4_5g11550 FvH4_5g11550
malus_domestica	MD06G1112100.v1.1 MD14G1133500.v1.1
prunus_persica	Prupe.5G125200_v2.0.a1
pyrus_communis	pycom06g10510
rosa_chinensis	RchiOBHm_Chr7g0186201
rosa_laevigata	RLG00000004856
rosa_multiflora	Rmu_sc0002609.1_g000006
rosa_roxburghii	Rroxscaffold_3G00268320
rosa_rugosa	Rorug06G0472700
rosa_samantha	Rh7BG084400 Rh7CG079400 Rh7DG079900
rosa_wichuraiana	Rw7G006640

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	466
AccBSI	CCGCTC	1 cut(s)	343
AccII	CGCG	4 cut(s)	270, 350, 497, 1273
AccIII	TCCGGA	1 cut(s)	1627
AcsI	RAATTY	3 cut(s)	720, 1152, 1575
AcvI	CACGTG	1 cut(s)	394
AcyI	GRCGYC	1 cut(s)	326
AfaI	GTAC	1 cut(s)	1020
AfeI	AGCGCT	1 cut(s)	1336
AflII	CTTAAG	1 cut(s)	1196
AflIII	ACRYGT	2 cut(s)	534, 664
AgeI	ACCGGT	1 cut(s)	561
AjnI	CCWGG	3 cut(s)	375, 1111, 1237
AjuI	GAANNNNNNNTTGG	4 cut(s)	290, 322, 1596, 1628
Alw21I	GWGCWC	2 cut(s)	733, 828
Alw26I	GTCTC	5 cut(s)	19, 632, 921, 1459, 1683
Ama87I	CYCGRG	4 cut(s)	283, 527, 1184, 1686
Aor13HI	TCCGGA	1 cut(s)	1627
Aor51HI	AGCGCT	1 cut(s)	1336
AoxI	GGCC	3 cut(s)	244, 421, 606
ApeKI	GCWGC	5 cut(s)	503, 523, 881, 1442, 1532
ApoI	RAATTY	3 cut(s)	720, 1152, 1575
AsiGI	ACCGGT	1 cut(s)	561
AspLEI	GCGC	4 cut(s)	350, 499, 1273, 1337
AsuC2I	CCSGG	9 cut(s)	6, 62, 95, 236, 323, 455, 1058, 1185, 1186
AsuHPI	GGTGA	4 cut(s)	189, 716, 955, 1365
AvaI	CYCGRG	4 cut(s)	283, 527, 1184, 1686
AxyI	CCTNAGG	1 cut(s)	1088
BaeGI	GKGCMC	1 cut(s)	519
BamHI	GGATCC	1 cut(s)	64
BanI	GGYRCC	1 cut(s)	466
BanII	GRGCYC	1 cut(s)	1185
BbrPI	CACGTG	1 cut(s)	394
BbsI	GAAGAC	2 cut(s)	934, 1751
Bbv12I	GWGCWC	2 cut(s)	733, 828
BbvCI	CCTCAGC	1 cut(s)	657
BbvI	GCAGC	5 cut(s)	490, 535, 868, 1429, 1544
BccI	CCATC	6 cut(s)	284, 350, 772, 1002, 1270, 1396
BceAI	ACGGC	1 cut(s)	118
BcgI	CGANNNNNNTGC	2 cut(s)	448, 482
BciT130I	CCWGG	3 cut(s)	377, 1113, 1239
BciVI	GTATCC	1 cut(s)	1498
BcnI	CCSGG	9 cut(s)	6, 62, 95, 236, 323, 455, 1058, 1185, 1186
BcoDI	GTCTC	5 cut(s)	19, 632, 921, 1459, 1683
BfaI	CTAG	2 cut(s)	866, 1356
BfmI	CTRYAG	1 cut(s)	412
BfoI	RGCGCY	1 cut(s)	1338
BfrI	CTTAAG	1 cut(s)	1196
BfuI	GTATCC	1 cut(s)	1498
BglI	GCCNNNNNGGC	1 cut(s)	845
BisI	GCNGC	6 cut(s)	402, 504, 524, 882, 1443, 1533
BlsI	GCNGC	6 cut(s)	403, 505, 525, 883, 1444, 1534
BmeT110I	CYCGRG	4 cut(s)	283, 527, 1184, 1686
BmiI	GGNNCC	6 cut(s)	60, 66, 204, 441, 468, 1685
BmsI	GCATC	5 cut(s)	208, 755, 986, 1534, 1555
BpiI	GAAGAC	2 cut(s)	934, 1751
BpmI	CTGGAG	1 cut(s)	1601
Bpu10I	CCTNAGC	1 cut(s)	657
BpuEI	CTTGAG	2 cut(s)	242, 842
BpuMI	CCSGG	9 cut(s)	6, 62, 95, 236, 323, 455, 1058, 1185, 1186
BsaAI	YACGTR	2 cut(s)	394, 537
BsaBI	GATNNNNATC	2 cut(s)	50, 599
BsaHI	GRCGYC	1 cut(s)	326
BsaJI	CCNNGG	5 cut(s)	93, 282, 609, 1184, 1185
BsaWI	WCCGGW	4 cut(s)	199, 442, 561, 1627
Bse118I	RCCGGY	4 cut(s)	423, 561, 771, 1676
Bse1I	ACTGG	2 cut(s)	1051, 1713
Bse21I	CCTNAGG	1 cut(s)	1088
Bse3DI	GCAATG	4 cut(s)	387, 681, 855, 1221
Bse8I	GATNNNNATC	2 cut(s)	50, 599
BseAI	TCCGGA	1 cut(s)	1627
BseBI	CCWGG	3 cut(s)	377, 1113, 1239
BseDI	CCNNGG	5 cut(s)	93, 282, 609, 1184, 1185
BseGI	GGATG	4 cut(s)	361, 994, 1183, 1281
BseJI	GATNNNNATC	2 cut(s)	50, 599
BseMI	GCAATG	4 cut(s)	387, 681, 855, 1221
BseMII	CTCAG	3 cut(s)	648, 1079, 1437
BseNI	ACTGG	2 cut(s)	1051, 1713
BseRI	GAGGAG	2 cut(s)	446, 596
BseSI	GKGCMC	1 cut(s)	519
BseXI	GCAGC	5 cut(s)	490, 535, 868, 1429, 1544
BseYI	CCCAGC	2 cut(s)	69, 547
Bsh1236I	CGCG	4 cut(s)	270, 350, 497, 1273
BshFI	GGCC	3 cut(s)	246, 423, 608
BshNI	GGYRCC	1 cut(s)	466
BshTI	ACCGGT	1 cut(s)	561
BsiHKAI	GWGCWC	2 cut(s)	733, 828
BsiHKCI	CYCGRG	4 cut(s)	283, 527, 1184, 1686
BslFI	GGGAC	5 cut(s)	44, 121, 127, 545, 1774
BsmAI	GTCTC	5 cut(s)	19, 632, 921, 1459, 1683
BsmBI	CGTCTC	1 cut(s)	1459
BsmFI	GGGAC	5 cut(s)	44, 121, 127, 545, 1774
BsmI	GAATGC	2 cut(s)	578, 1087
BsnI	GGCC	3 cut(s)	246, 423, 608
BsoBI	CYCGRG	4 cut(s)	283, 527, 1184, 1686
Bsp1286I	GDGCHC	4 cut(s)	519, 733, 828, 1185
Bsp13I	TCCGGA	1 cut(s)	1627
Bsp68I	TCGCGA	1 cut(s)	270
BspANI	GGCC	3 cut(s)	246, 423, 608
BspCNI	CTCAG	3 cut(s)	649, 1080, 1438
BspEI	TCCGGA	1 cut(s)	1627
BspFNI	CGCG	4 cut(s)	270, 350, 497, 1273
BspLI	GGNNCC	6 cut(s)	60, 66, 204, 441, 468, 1685
BspT107I	GGYRCC	1 cut(s)	466
BspTI	CTTAAG	1 cut(s)	1196
BsrBI	CCGCTC	1 cut(s)	343
BsrDI	GCAATG	4 cut(s)	387, 681, 855, 1221
BsrFI	RCCGGY	4 cut(s)	423, 561, 771, 1676
BsrI	ACTGG	2 cut(s)	1051, 1713
BssAI	RCCGGY	4 cut(s)	423, 561, 771, 1676
BssECI	CCNNGG	5 cut(s)	93, 282, 609, 1184, 1185
BssNI	GRCGYC	1 cut(s)	326
BssT1I	CCWWGG	1 cut(s)	609
Bst2UI	CCWGG	3 cut(s)	377, 1113, 1239
Bst4CI	ACNGT	5 cut(s)	58, 413, 728, 967, 1076
Bst6I	CTCTTC	4 cut(s)	475, 750, 1122, 1640
BstACI	GRCGYC	1 cut(s)	326
BstAFI	CTTAAG	1 cut(s)	1196
BstAPI	GCANNNNNTGC	1 cut(s)	854
BstBAI	YACGTR	2 cut(s)	394, 537
BstDEI	CTNAG	4 cut(s)	657, 1088, 1349, 1446
BstF5I	GGATG	4 cut(s)	361, 994, 1183, 1281
BstFNI	CGCG	4 cut(s)	270, 350, 497, 1273
BstH2I	RGCGCY	1 cut(s)	1338
BstHHI	GCGC	4 cut(s)	350, 499, 1273, 1337
BstMAI	GTCTC	5 cut(s)	19, 632, 921, 1459, 1683
BstMWI	GCNNNNNNNGC	8 cut(s)	323, 494, 503, 523, 642, 845, 854, 1660
BstNI	CCWGG	3 cut(s)	377, 1113, 1239
BstNSI	RCATGY	3 cut(s)	523, 668, 1297
BstSFI	CTRYAG	1 cut(s)	412
BstSLI	GKGCMC	1 cut(s)	519
BstUI	CGCG	4 cut(s)	270, 350, 497, 1273
BstV1I	GCAGC	5 cut(s)	490, 535, 868, 1429, 1544
BstV2I	GAAGAC	2 cut(s)	934, 1751
BstX2I	RGATCY	4 cut(s)	64, 80, 238, 594
BstYI	RGATCY	4 cut(s)	64, 80, 238, 594
Bsu36I	CCTNAGG	1 cut(s)	1088
BsuI	GTATCC	1 cut(s)	1498
BsuRI	GGCC	3 cut(s)	246, 423, 608
BtgZI	GCGATG	1 cut(s)	262
BtsCI	GGATG	4 cut(s)	361, 994, 1183, 1281
BtsIMutI	CAGTG	2 cut(s)	618, 1706
BtuMI	TCGCGA	1 cut(s)	270
CfoI	GCGC	4 cut(s)	350, 499, 1273, 1337
Cfr10I	RCCGGY	4 cut(s)	423, 561, 771, 1676
Cfr9I	CCCGGG	1 cut(s)	1184
CpoI	CGGWCCG	1 cut(s)	319
CseI	GACGC	1 cut(s)	315
Csp6I	GTAC	1 cut(s)	1019
CspAI	ACCGGT	1 cut(s)	561
CspI	CGGWCCG	1 cut(s)	319
CviAII	CATG	4 cut(s)	520, 665, 844, 1294
CviQI	GTAC	1 cut(s)	1019
DdeI	CTNAG	4 cut(s)	657, 1088, 1349, 1446
DraI	TTTAAA	1 cut(s)	972
Eam1104I	CTCTTC	4 cut(s)	475, 750, 1122, 1640
EarI	CTCTTC	4 cut(s)	475, 750, 1122, 1640
EciI	GGCGGA	1 cut(s)	28
Eco130I	CCWWGG	1 cut(s)	609
Eco147I	AGGCCT	1 cut(s)	608
Eco24I	GRGCYC	1 cut(s)	1185
Eco47III	AGCGCT	1 cut(s)	1336
Eco72I	CACGTG	1 cut(s)	394
Eco81I	CCTNAGG	1 cut(s)	1088
Eco88I	CYCGRG	4 cut(s)	283, 527, 1184, 1686
EcoO109I	RGGNCCY	1 cut(s)	1683
EcoRII	CCWGG	3 cut(s)	375, 1111, 1237
EcoT14I	CCWWGG	1 cut(s)	609
EcoT38I	GRGCYC	1 cut(s)	1185
ErhI	CCWWGG	1 cut(s)	609
Esp3I	CGTCTC	1 cut(s)	1459
FaeI	CATG	4 cut(s)	523, 668, 847, 1297
FalI	AAGNNNNNCTT	6 cut(s)	1309, 1341, 1361, 1393, 1596, 1628
FaqI	GGGAC	5 cut(s)	44, 121, 127, 545, 1774
FatI	CATG	4 cut(s)	519, 664, 843, 1293
FauI	CCCGC	3 cut(s)	36, 97, 175
FauNDI	CATATG	1 cut(s)	788
Fnu4HI	GCNGC	6 cut(s)	402, 504, 524, 882, 1443, 1533
FokI	GGATG	4 cut(s)	368, 981, 1190, 1288
FriOI	GRGCYC	1 cut(s)	1185
Fsp4HI	GCNGC	6 cut(s)	402, 504, 524, 882, 1443, 1533
FspBI	CTAG	2 cut(s)	866, 1356
GlaI	GCGC	4 cut(s)	349, 498, 1272, 1336
GluI	GCNGC	6 cut(s)	402, 504, 524, 882, 1443, 1533
GsaI	CCCAGC	2 cut(s)	73, 551
GsuI	CTGGAG	1 cut(s)	1601
HaeII	RGCGCY	1 cut(s)	1338
HaeIII	GGCC	3 cut(s)	246, 423, 608
HgaI	GACGC	1 cut(s)	315
HhaI	GCGC	4 cut(s)	350, 499, 1273, 1337
Hin1I	GRCGYC	1 cut(s)	326
Hin1II	CATG	4 cut(s)	523, 668, 847, 1297
Hin6I	GCGC	4 cut(s)	348, 497, 1271, 1335
HinP1I	GCGC	4 cut(s)	348, 497, 1271, 1335
HindIII	AAGCTT	1 cut(s)	1610
HinfI	GANTC	9 cut(s)	35, 51, 208, 367, 460, 758, 812, 1061, 1169
HphI	GGTGA	4 cut(s)	189, 716, 955, 1365
Hpy166II	GTNNAC	2 cut(s)	559, 740
Hpy188I	TCNGA	6 cut(s)	50, 85, 479, 954, 1126, 1660
Hpy8I	GTNNAC	2 cut(s)	559, 740
HpyAV	CCTTC	7 cut(s)	120, 156, 284, 949, 1008, 1387, 1644
HpyCH4III	ACNGT	5 cut(s)	58, 413, 728, 967, 1076
HpyCH4IV	ACGT	2 cut(s)	393, 536
HpyF10VI	GCNNNNNNNGC	8 cut(s)	323, 494, 503, 523, 642, 845, 854, 1660
HpyF3I	CTNAG	4 cut(s)	657, 1088, 1349, 1446
HpySE526I	ACGT	2 cut(s)	393, 536
Hsp92I	GRCGYC	1 cut(s)	326
Hsp92II	CATG	4 cut(s)	523, 668, 847, 1297
HspAI	GCGC	4 cut(s)	348, 497, 1271, 1335
Kpn2I	TCCGGA	1 cut(s)	1627
KroI	GCCGGC	1 cut(s)	771
KroNI	GCCGGC	1 cut(s)	773
LmnI	GCTCC	1 cut(s)	1059
Lsp1109I	GCAGC	5 cut(s)	490, 535, 868, 1429, 1544
LweI	GCATC	5 cut(s)	208, 755, 986, 1534, 1555
MaeI	CTAG	2 cut(s)	866, 1356
MaeII	ACGT	2 cut(s)	393, 536
MaeIII	GTNAC	3 cut(s)	1339, 1371, 1704
MbiI	CCGCTC	1 cut(s)	343
MfeI	CAATTG	3 cut(s)	1254, 1421, 1569
MflI	RGATCY	4 cut(s)	64, 80, 238, 594
MhlI	GDGCHC	4 cut(s)	519, 733, 828, 1185
MluCI	AATT	9 cut(s)	698, 720, 1152, 1254, 1421, 1569, 1575, 1595, 1617
MlyI	GAGTC	4 cut(s)	29, 376, 767, 1070
MmeI	TCCRAC	1 cut(s)	288
MroI	TCCGGA	1 cut(s)	1627
MroNI	GCCGGC	1 cut(s)	771
MseI	TTAA	3 cut(s)	971, 1197, 1593
MslI	CAYNNNNRTG	2 cut(s)	848, 911
MspA1I	CMGCKG	1 cut(s)	764
MspCI	CTTAAG	1 cut(s)	1196
MunI	CAATTG	3 cut(s)	1254, 1421, 1569
Mva1269I	GAATGC	2 cut(s)	578, 1087
MvaI	CCWGG	3 cut(s)	377, 1113, 1239
MvnI	CGCG	4 cut(s)	270, 350, 497, 1273
MwoI	GCNNNNNNNGC	8 cut(s)	323, 494, 503, 523, 642, 845, 854, 1660
NaeI	GCCGGC	1 cut(s)	773
NciI	CCSGG	9 cut(s)	6, 62, 95, 236, 323, 455, 1058, 1185, 1186
NdeI	CATATG	1 cut(s)	788
NgoMIV	GCCGGC	1 cut(s)	771
NlaIII	CATG	4 cut(s)	523, 668, 847, 1297
NlaIV	GGNNCC	6 cut(s)	60, 66, 204, 441, 468, 1685
NmeAIII	GCCGAG	2 cut(s)	222, 390
NmuCI	GTSAC	2 cut(s)	1371, 1704
NruI	TCGCGA	1 cut(s)	270
NspI	RCATGY	3 cut(s)	523, 668, 1297
PaeI	GCATGC	1 cut(s)	1297
PceI	AGGCCT	1 cut(s)	608
PciI	ACATGT	1 cut(s)	664
PctI	GAATGC	2 cut(s)	578, 1087
PdiI	GCCGGC	1 cut(s)	773
PfeI	GAWTC	5 cut(s)	51, 208, 460, 812, 1169
PfoI	TCCNGGA	2 cut(s)	60, 1056
PinAI	ACCGGT	1 cut(s)	561
PkrI	GCNGC	6 cut(s)	403, 505, 525, 883, 1444, 1534
PleI	GAGTC	4 cut(s)	29, 375, 766, 1069
PmaCI	CACGTG	1 cut(s)	394
PmlI	CACGTG	1 cut(s)	394
PpsI	GAGTC	4 cut(s)	29, 375, 766, 1069
Ppu21I	YACGTR	2 cut(s)	394, 537
PpuMI	RGGWCCY	1 cut(s)	1683
PscI	ACATGT	1 cut(s)	664
Psp5II	RGGWCCY	1 cut(s)	1683
Psp6I	CCWGG	3 cut(s)	375, 1111, 1237
PspCI	CACGTG	1 cut(s)	394
PspFI	CCCAGC	2 cut(s)	69, 547
PspGI	CCWGG	3 cut(s)	375, 1111, 1237
PspN4I	GGNNCC	6 cut(s)	60, 66, 204, 441, 468, 1685
PspPPI	RGGWCCY	1 cut(s)	1683
PsuI	RGATCY	4 cut(s)	64, 80, 238, 594
PvuII	CAGCTG	1 cut(s)	764
RruI	TCGCGA	1 cut(s)	270
RsaI	GTAC	1 cut(s)	1020
RsaNI	GTAC	1 cut(s)	1019
RseI	CAYNNNNRTG	2 cut(s)	848, 911
Rsr2I	CGGWCCG	1 cut(s)	319
RsrII	CGGWCCG	1 cut(s)	319
SaqAI	TTAA	3 cut(s)	971, 1197, 1593
SatI	GCNGC	6 cut(s)	402, 504, 524, 882, 1443, 1533
SchI	GAGTC	4 cut(s)	29, 376, 767, 1070
SduI	GDGCHC	4 cut(s)	519, 733, 828, 1185
SfaNI	GCATC	5 cut(s)	208, 755, 986, 1534, 1555
SfcI	CTRYAG	1 cut(s)	412
SmaI	CCCGGG	1 cut(s)	1186
SmiMI	CAYNNNNRTG	2 cut(s)	848, 911
SmlI	CTYRAG	4 cut(s)	257, 821, 1196, 1780
SmoI	CTYRAG	4 cut(s)	257, 821, 1196, 1780
SphI	GCATGC	1 cut(s)	1297
Sse9I	AATT	9 cut(s)	698, 720, 1152, 1254, 1421, 1569, 1575, 1595, 1617
SseBI	AGGCCT	1 cut(s)	608
SspMI	CTAG	2 cut(s)	866, 1356
StuI	AGGCCT	1 cut(s)	608
StyI	CCWWGG	1 cut(s)	609
TaaI	ACNGT	5 cut(s)	58, 413, 728, 967, 1076
TaiI	ACGT	2 cut(s)	396, 539
TaqI	TCGA	6 cut(s)	228, 339, 429, 603, 1722, 1733
TaqII	GACCGA	1 cut(s)	310
TasI	AATT	9 cut(s)	698, 720, 1152, 1254, 1421, 1569, 1575, 1595, 1617
TauI	GCSGC	1 cut(s)	404
TfiI	GAWTC	5 cut(s)	51, 208, 460, 812, 1169
Tru1I	TTAA	3 cut(s)	971, 1197, 1593
Tru9I	TTAA	3 cut(s)	971, 1197, 1593
TscAI	CASTG	2 cut(s)	625, 1713
TseFI	GTSAC	2 cut(s)	1371, 1704
TseI	GCWGC	5 cut(s)	503, 523, 881, 1442, 1532
Tsp45I	GTSAC	2 cut(s)	1371, 1704
TspDTI	ATGAA	4 cut(s)	825, 1182, 1232, 1323
TspGWI	ACGGA	2 cut(s)	7, 1483
TspMI	CCCGGG	1 cut(s)	1184
TspRI	CASTG	2 cut(s)	625, 1713
Vha464I	CTTAAG	1 cut(s)	1196
XapI	RAATTY	3 cut(s)	720, 1152, 1575
XceI	RCATGY	3 cut(s)	523, 668, 1297
XmaI	CCCGGG	1 cut(s)	1184
XspI	CTAG	2 cut(s)	866, 1356

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.