Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr14

Orthogroup ID

OG0014571

Physical Location & Seq

Genomic Coordinates Reverse (-)

21165747 .. 21168633

Gene Structure 2887 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD14G1133500.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1797 bp

ATGCCGGGTCTAGTCTCCGTCAAAACCCCGCCCGACTCCACCCCGCCCCGAATCGCGGTGCCGGATCCCCAGCCCCAACAATCCGAACCCGCCCCGGTTTCCAGAACCCCTTCCCCCCAAACCAAAAAACCGCCGTCCCCGTCCCCGTCCCGATCCAAACCCTCGCCCGCCCGTTCCAAAAAGCACCAACCCGCTTCCCCGGATCCTATTCTCGCCGATGCCTCCCTAGACAACCCGGATCTCGGCCCGTTTCTGCTCAAGCTGGCCCGGGACACAATCGCCTCCGGCGAGGGTCCGAACAAGGCGCTGGAGTACGCAGTCCGGGCGTCCAAGTCGTTCGAGCGGTGCGCGGTGGAGGGCGAGCCGAGCCTGGACCTGGCCATGAGCTTGCACGTGCTGGCGGCGATTTACTGTAGCTTGGCCCGGTTCGAGGAGGCGGTTCCGGTTCTGGACCGGGCGATTCGGGTGCCAGAGGTTGGAAGAGGTGCGGATCACGCGCTCGCTGCGTTCTCTGGGCACATGCAGCTCGGGGACACGTATTCAATGCTGGGTCAGGTGGACCGGTCCATTGAATGCTATGAGGAGGGATTGAAGATCCAGATCGAGGCCTTGGGCGACACTGATCTGAGAGTTGGCGAGACTTGCAGATATTTAGCTGAGGCGCATGTCCAAGCAATGCAGTTTGAAAGAGCAGAAGAATTGTGCAAGAAAACTCTTGAAATTCACCGTGCTCATAGTGAACCAGCATCTCTTGAAGAGTCAGCTGACCGCCGGCTGATGGCTCTCATATGCGAGTCAAAGGGAGATTATGAATCAGCACTTGAGCACCTTGTCCTCGCCAGCATGGCAATGATTGCAAATGGGCTAGAAAATGAGGTTGCTGCTATTGATATCAGCATAGGTAACATTTATATGTCTCTTTGTCGCTTTGATGAGGCTGTCTTCTCCTATCAGAAGGCACTCACTGTTTTAAAGGCATCAAAGGGCGATAACCACCCTTCTGTTGCCTCTGTCTTTGTACGCCTTGCTGACCTATATCATAGGACTGGAAAGCTCCGAGAGTCCAAATCATACTGTGAGAATGCCCTGAGGATTTATGTGAAACCTGTGCCTGGAACAACGGCAGAAGAGATTTCTGGTGGATTGACTGAAATTTCAGCCATTTATGAGTCAATGGATGAGCCCGAGGAGGCACTTAAGTTATTACAGAAGGCGATGAAGTTGTTAGAGGGTAAACCAGGACAGCAAAGCACAATTGCTGGAATAGAAGCACGGATGGGAGTGATGTTTTGCATGCTCGGGAGATATGAAGAAGCAAGGAACTCTTTTGAAAGCGCTGTAACTAAACTTAGAGCTAGTGGAGAGAAGAAGTCGCCCTTCTTTGGGGTTGTATTGAACCAAATGGGTTTGGCTTGTGTTCAATTGTTCAAGATAGATGAGGCTGCTGAGTTGTTTGAAGAAGCGAGACGGATATTAGAACAAGAATGTGGTCCTTGTCATCAGGATACTCTTGGAGTATATAGCAATCTCGCAGCAACCTATGATGCTATGGGGAGAGTTGAAGATGCAATTGAAATTCTGGAGTACGTCCTTAAATTGCGAGAAGAAAAGCTTGGAATTGCAAACCCGGATTTTGAAGATGAGAAGAGAAGGCTATCCGAGCTTCTGAAAGAAGCCGGTAGGACCCGAGACAGAAAGGCAAAGTCACTGGAAAACCTCATTGACCCGAACTCGACCTCGAAGAAGACAAGGAAAGAGGGGACAAAGAAGTGGGGTGCCTTGAGCTTCAAACAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002009 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005856 GO:0005874 GO:0005886 GO:0005929 GO:0006996 GO:0007275 GO:0007369 GO:0008150 GO:0009653 GO:0009790 GO:0009888 GO:0009966 GO:0009968 GO:0009987 GO:0010646 GO:0010648 GO:0015630 GO:0016020 GO:0016043 GO:0022603 GO:0022607 GO:0023051 GO:0023057 GO:0030030 GO:0030031 GO:0030111 GO:0030178 GO:0032501 GO:0032502 GO:0042995 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0044085 GO:0044422 GO:0044424 GO:0044430 GO:0044446 GO:0044464 GO:0044782 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0048598 GO:0048729 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0051239 GO:0060026 GO:0060027 GO:0060271 GO:0060429 GO:0060828 GO:0065007 GO:0070925 GO:0071840 GO:0071944 GO:0090090 GO:0090175 GO:0099080 GO:0099081 GO:0099512 GO:0099513 GO:0120025 GO:0120031 GO:0120036 GO:1905330 GO:2000026 GO:2000027 GO:2000050 GO:2000095

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

TPR_10 TPR_12 TPR_8

Protein Analysis

599

Amino Acids

65.71

Weight (kDa)

5.57

Isoelectric Point (pI)

49.42

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TPR_NPHP3	PF24885	108 - 249	1.4e-07	Nephrocystin-3 TPR domain
TPR_MalT	PF17874	132 - 282	4.7e-07	MalT-like TPR region
TPR_12	PF13424	174 - 243	1.9e-07	Tetratricopeptide repeat
TPR_MalT	PF17874	260 - 441	3.4e-08	MalT-like TPR region
TPR_NPHP3	PF24885	291 - 411	3e-08	Nephrocystin-3 TPR domain
TPR_12	PF13424	293 - 366	1.3e-10	Tetratricopeptide repeat
TPR_12	PF13424	335 - 410	1.5e-08	Tetratricopeptide repeat
TPR_12	PF13424	422 - 494	5.4e-09	Tetratricopeptide repeat
TPR_12	PF13424	464 - 536	1.3e-10	Tetratricopeptide repeat
TPR_10	PF13374	503 - 544	2.4e-06	Tetratricopeptide repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014571)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G10840
fragaria_vesca	FvH4_5g11550 FvH4_5g11550 FvH4_5g11550
malus_domestica	MD06G1112100.v1.1 MD14G1133500.v1.1
prunus_persica	Prupe.5G125200_v2.0.a1
pyrus_communis	pycom06g10510
rosa_chinensis	RchiOBHm_Chr7g0186201
rosa_laevigata	RLG00000004856
rosa_multiflora	Rmu_sc0002609.1_g000006
rosa_roxburghii	Rroxscaffold_3G00268320
rosa_rugosa	Rorug06G0472700
rosa_samantha	Rh7BG084400 Rh7CG079400 Rh7DG079900
rosa_wichuraiana	Rw7G006640

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	3 cut(s)	58, 466, 1775
AccB7I	CCANNNNNTGG	1 cut(s)	476
AccBSI	CCGCTC	1 cut(s)	343
AccII	CGCG	3 cut(s)	56, 350, 497
AclWI	GGATC	8 cut(s)	59, 72, 147, 197, 210, 246, 498, 589
AcoI	YGGCCR	1 cut(s)	378
AcsI	RAATTY	3 cut(s)	720, 1152, 1575
AcvI	CACGTG	1 cut(s)	394
AcyI	GRCGYC	1 cut(s)	326
AfaI	GTAC	3 cut(s)	314, 1020, 1586
AfeI	AGCGCT	1 cut(s)	1336
AflII	CTTAAG	1 cut(s)	1196
AflIII	ACRYGT	1 cut(s)	534
AgeI	ACCGGT	1 cut(s)	561
AjnI	CCWGG	4 cut(s)	369, 375, 1111, 1237
AjuI	GAANNNNNNNTTGG	2 cut(s)	1596, 1628
Alw21I	GWGCWC	2 cut(s)	733, 828
Alw26I	GTCTC	5 cut(s)	19, 632, 921, 1459, 1683
AlwI	GGATC	8 cut(s)	59, 72, 147, 197, 210, 246, 498, 589
Ama87I	CYCGRG	5 cut(s)	267, 527, 1184, 1298, 1686
Aor51HI	AGCGCT	1 cut(s)	1336
AoxI	GGCC	5 cut(s)	244, 264, 378, 420, 606
ApeKI	GCWGC	5 cut(s)	503, 523, 881, 1442, 1532
ApoI	RAATTY	3 cut(s)	720, 1152, 1575
AsiGI	ACCGGT	1 cut(s)	561
Asp700I	GAANNNNTTC	1 cut(s)	109
AspLEI	GCGC	5 cut(s)	307, 350, 499, 664, 1337
AsuHPI	GGTGA	1 cut(s)	716
AvaI	CYCGRG	5 cut(s)	267, 527, 1184, 1298, 1686
AvaII	GGWCC	7 cut(s)	293, 373, 451, 559, 564, 1490, 1683
AxyI	CCTNAGG	1 cut(s)	1088
BaeGI	GKGCMC	1 cut(s)	519
BalI	TGGCCA	1 cut(s)	380
BamHI	GGATCC	2 cut(s)	64, 202
BanI	GGYRCC	3 cut(s)	58, 466, 1775
BanII	GRGCYC	1 cut(s)	1185
BbrPI	CACGTG	1 cut(s)	394
BbsI	GAAGAC	2 cut(s)	934, 1751
Bbv12I	GWGCWC	2 cut(s)	733, 828
BbvCI	CCTCAGC	1 cut(s)	657
BbvI	GCAGC	5 cut(s)	490, 535, 868, 1429, 1544
BccI	CCATC	2 cut(s)	772, 1270
BceAI	ACGGC	2 cut(s)	118, 1137
BcgI	CGANNNNNNTGC	2 cut(s)	448, 482
BciT130I	CCWGG	4 cut(s)	371, 377, 1113, 1239
BciVI	GTATCC	1 cut(s)	1498
BcoDI	GTCTC	5 cut(s)	19, 632, 921, 1459, 1683
BfaI	CTAG	4 cut(s)	11, 227, 866, 1356
BfmI	CTRYAG	1 cut(s)	412
BfoI	RGCGCY	2 cut(s)	308, 1338
BfrI	CTTAAG	1 cut(s)	1196
BfuI	GTATCC	1 cut(s)	1498
BglI	GCCNNNNNGGC	1 cut(s)	845
BisI	GCNGC	6 cut(s)	402, 504, 524, 882, 1443, 1533
BlsI	GCNGC	6 cut(s)	403, 505, 525, 883, 1444, 1534
Bme18I	GGWCC	7 cut(s)	293, 373, 451, 559, 564, 1490, 1683
BmeT110I	CYCGRG	5 cut(s)	267, 527, 1184, 1298, 1686
BmiI	GGNNCC	8 cut(s)	60, 66, 204, 294, 441, 468, 1685, 1777
BmsI	GCATC	5 cut(s)	208, 755, 986, 1534, 1555
BpiI	GAAGAC	2 cut(s)	934, 1751
BpmI	CTGGAG	2 cut(s)	329, 1601
Bpu10I	CCTNAGC	1 cut(s)	657
BpuEI	CTTGAG	2 cut(s)	242, 842
BsaAI	YACGTR	2 cut(s)	394, 537
BsaBI	GATNNNNATC	1 cut(s)	599
BsaHI	GRCGYC	1 cut(s)	326
BsaJI	CCNNGG	5 cut(s)	93, 198, 267, 609, 1185
BsaWI	WCCGGW	2 cut(s)	442, 561
Bse118I	RCCGGY	3 cut(s)	561, 771, 1676
Bse1I	ACTGG	2 cut(s)	1051, 1713
Bse21I	CCTNAGG	1 cut(s)	1088
Bse3DI	GCAATG	2 cut(s)	681, 855
Bse8I	GATNNNNATC	1 cut(s)	599
BseBI	CCWGG	4 cut(s)	371, 377, 1113, 1239
BseDI	CCNNGG	5 cut(s)	93, 198, 267, 609, 1185
BseGI	GGATG	2 cut(s)	1183, 1281
BseJI	GATNNNNATC	1 cut(s)	599
BseMI	GCAATG	2 cut(s)	681, 855
BseMII	CTCAG	4 cut(s)	617, 648, 1079, 1437
BseNI	ACTGG	2 cut(s)	1051, 1713
BseRI	GAGGAG	3 cut(s)	446, 596, 1202
BseSI	GKGCMC	1 cut(s)	519
BseXI	GCAGC	5 cut(s)	490, 535, 868, 1429, 1544
BseYI	CCCAGC	2 cut(s)	69, 547
Bsh1236I	CGCG	3 cut(s)	56, 350, 497
BshFI	GGCC	5 cut(s)	246, 266, 380, 422, 608
BshNI	GGYRCC	3 cut(s)	58, 466, 1775
BshTI	ACCGGT	1 cut(s)	561
BsiHKAI	GWGCWC	2 cut(s)	733, 828
BsiHKCI	CYCGRG	5 cut(s)	267, 527, 1184, 1298, 1686
BslFI	GGGAC	6 cut(s)	121, 127, 133, 284, 545, 1774
BsmAI	GTCTC	5 cut(s)	19, 632, 921, 1459, 1683
BsmBI	CGTCTC	1 cut(s)	1459
BsmFI	GGGAC	6 cut(s)	121, 127, 133, 284, 545, 1774
BsmI	GAATGC	2 cut(s)	578, 1087
BsnI	GGCC	5 cut(s)	246, 266, 380, 422, 608
BsoBI	CYCGRG	5 cut(s)	267, 527, 1184, 1298, 1686
Bsp1286I	GDGCHC	4 cut(s)	519, 733, 828, 1185
Bsp143I	GATC	8 cut(s)	64, 152, 202, 238, 490, 594, 600, 622
BspANI	GGCC	5 cut(s)	246, 266, 380, 422, 608
BspCNI	CTCAG	4 cut(s)	618, 649, 1080, 1438
BspFNI	CGCG	3 cut(s)	56, 350, 497
BspLI	GGNNCC	8 cut(s)	60, 66, 204, 294, 441, 468, 1685, 1777
BspPI	GGATC	8 cut(s)	59, 72, 147, 197, 210, 246, 498, 589
BspT107I	GGYRCC	3 cut(s)	58, 466, 1775
BspTI	CTTAAG	1 cut(s)	1196
BsrBI	CCGCTC	1 cut(s)	343
BsrDI	GCAATG	2 cut(s)	681, 855
BsrFI	RCCGGY	3 cut(s)	561, 771, 1676
BsrI	ACTGG	2 cut(s)	1051, 1713
BssAI	RCCGGY	3 cut(s)	561, 771, 1676
BssECI	CCNNGG	5 cut(s)	93, 198, 267, 609, 1185
BssMI	GATC	8 cut(s)	64, 152, 202, 238, 490, 594, 600, 622
BssNI	GRCGYC	1 cut(s)	326
BssT1I	CCWWGG	1 cut(s)	609
Bst2UI	CCWGG	4 cut(s)	371, 377, 1113, 1239
Bst4CI	ACNGT	5 cut(s)	413, 728, 967, 1076, 1794
Bst6I	CTCTTC	4 cut(s)	475, 750, 1122, 1640
BstACI	GRCGYC	1 cut(s)	326
BstAFI	CTTAAG	1 cut(s)	1196
BstAPI	GCANNNNNTGC	1 cut(s)	854
BstBAI	YACGTR	2 cut(s)	394, 537
BstC8I	GCNNGC	9 cut(s)	168, 264, 362, 389, 399, 501, 773, 841, 1295
BstDEI	CTNAG	5 cut(s)	626, 657, 1088, 1349, 1446
BstF5I	GGATG	2 cut(s)	1183, 1281
BstFNI	CGCG	3 cut(s)	56, 350, 497
BstH2I	RGCGCY	2 cut(s)	308, 1338
BstHHI	GCGC	5 cut(s)	307, 350, 499, 664, 1337
BstKTI	GATC	8 cut(s)	67, 155, 205, 241, 493, 597, 603, 625
BstMAI	GTCTC	5 cut(s)	19, 632, 921, 1459, 1683
BstMBI	GATC	8 cut(s)	64, 152, 202, 238, 490, 594, 600, 622
BstMWI	GCNNNNNNNGC	9 cut(s)	323, 366, 494, 503, 523, 642, 845, 854, 1660
BstNI	CCWGG	4 cut(s)	371, 377, 1113, 1239
BstNSI	RCATGY	3 cut(s)	523, 668, 1297
BstSFI	CTRYAG	1 cut(s)	412
BstSLI	GKGCMC	1 cut(s)	519
BstUI	CGCG	3 cut(s)	56, 350, 497
BstV1I	GCAGC	5 cut(s)	490, 535, 868, 1429, 1544
BstV2I	GAAGAC	2 cut(s)	934, 1751
BstX2I	RGATCY	4 cut(s)	64, 202, 238, 594
BstYI	RGATCY	4 cut(s)	64, 202, 238, 594
Bsu36I	CCTNAGG	1 cut(s)	1088
BsuI	GTATCC	1 cut(s)	1498
BsuRI	GGCC	5 cut(s)	246, 266, 380, 422, 608
BtgZI	GCGATG	1 cut(s)	1229
BtsCI	GGATG	2 cut(s)	1183, 1281
BtsIMutI	CAGTG	3 cut(s)	618, 963, 1706
Cac8I	GCNNGC	9 cut(s)	168, 264, 362, 389, 399, 501, 773, 841, 1295
CfoI	GCGC	5 cut(s)	307, 350, 499, 664, 1337
Cfr10I	RCCGGY	3 cut(s)	561, 771, 1676
Cfr9I	CCCGGG	1 cut(s)	267
CseI	GACGC	1 cut(s)	315
Csp6I	GTAC	3 cut(s)	313, 1019, 1585
CspAI	ACCGGT	1 cut(s)	561
CviAII	CATG	5 cut(s)	382, 520, 665, 844, 1294
CviQI	GTAC	3 cut(s)	313, 1019, 1585
DdeI	CTNAG	5 cut(s)	626, 657, 1088, 1349, 1446
DpnI	GATC	8 cut(s)	66, 154, 204, 240, 492, 596, 602, 624
DpnII	GATC	8 cut(s)	64, 152, 202, 238, 490, 594, 600, 622
DraI	TTTAAA	1 cut(s)	972
EaeI	YGGCCR	1 cut(s)	378
Eam1104I	CTCTTC	4 cut(s)	475, 750, 1122, 1640
EarI	CTCTTC	4 cut(s)	475, 750, 1122, 1640
Eco130I	CCWWGG	1 cut(s)	609
Eco147I	AGGCCT	1 cut(s)	608
Eco24I	GRGCYC	1 cut(s)	1185
Eco32I	GATATC	1 cut(s)	892
Eco47I	GGWCC	7 cut(s)	293, 373, 451, 559, 564, 1490, 1683
Eco47III	AGCGCT	1 cut(s)	1336
Eco72I	CACGTG	1 cut(s)	394
Eco81I	CCTNAGG	1 cut(s)	1088
Eco88I	CYCGRG	5 cut(s)	267, 527, 1184, 1298, 1686
EcoO109I	RGGNCCY	1 cut(s)	1683
EcoRII	CCWGG	4 cut(s)	369, 375, 1111, 1237
EcoRV	GATATC	1 cut(s)	892
EcoT14I	CCWWGG	1 cut(s)	609
EcoT38I	GRGCYC	1 cut(s)	1185
ErhI	CCWWGG	1 cut(s)	609
Esp3I	CGTCTC	1 cut(s)	1459
FaeI	CATG	5 cut(s)	385, 523, 668, 847, 1297
FalI	AAGNNNNNCTT	6 cut(s)	1309, 1341, 1361, 1393, 1596, 1628
FaqI	GGGAC	6 cut(s)	121, 127, 133, 284, 545, 1774
FatI	CATG	5 cut(s)	381, 519, 664, 843, 1293
FauI	CCCGC	5 cut(s)	36, 51, 97, 175, 199
FauNDI	CATATG	1 cut(s)	788
Fnu4HI	GCNGC	6 cut(s)	402, 504, 524, 882, 1443, 1533
FokI	GGATG	2 cut(s)	1190, 1288
FriOI	GRGCYC	1 cut(s)	1185
Fsp4HI	GCNGC	6 cut(s)	402, 504, 524, 882, 1443, 1533
FspBI	CTAG	4 cut(s)	11, 227, 866, 1356
GlaI	GCGC	5 cut(s)	306, 349, 498, 663, 1336
GluI	GCNGC	6 cut(s)	402, 504, 524, 882, 1443, 1533
GsaI	CCCAGC	2 cut(s)	73, 551
GsuI	CTGGAG	2 cut(s)	329, 1601
HaeII	RGCGCY	2 cut(s)	308, 1338
HaeIII	GGCC	5 cut(s)	246, 266, 380, 422, 608
HgaI	GACGC	1 cut(s)	315
HhaI	GCGC	5 cut(s)	307, 350, 499, 664, 1337
Hin1I	GRCGYC	1 cut(s)	326
Hin1II	CATG	5 cut(s)	385, 523, 668, 847, 1297
Hin6I	GCGC	5 cut(s)	305, 348, 497, 662, 1335
HinP1I	GCGC	5 cut(s)	305, 348, 497, 662, 1335
HindIII	AAGCTT	1 cut(s)	1610
HinfI	GANTC	8 cut(s)	35, 51, 460, 758, 794, 812, 1061, 1169
HphI	GGTGA	1 cut(s)	716
Hpy166II	GTNNAC	3 cut(s)	559, 740, 1235
Hpy188I	TCNGA	7 cut(s)	85, 297, 627, 954, 1058, 1660, 1668
Hpy8I	GTNNAC	3 cut(s)	559, 740, 1235
HpyAV	CCTTC	6 cut(s)	120, 949, 1008, 1204, 1387, 1644
HpyCH4III	ACNGT	5 cut(s)	413, 728, 967, 1076, 1794
HpyCH4IV	ACGT	3 cut(s)	393, 536, 1587
HpyCH4V	TGCA	9 cut(s)	391, 523, 645, 679, 705, 857, 1293, 1568, 1622
HpyF10VI	GCNNNNNNNGC	9 cut(s)	323, 366, 494, 503, 523, 642, 845, 854, 1660
HpyF3I	CTNAG	5 cut(s)	626, 657, 1088, 1349, 1446
HpySE526I	ACGT	3 cut(s)	393, 536, 1587
Hsp92I	GRCGYC	1 cut(s)	326
Hsp92II	CATG	5 cut(s)	385, 523, 668, 847, 1297
HspAI	GCGC	5 cut(s)	305, 348, 497, 662, 1335
KroI	GCCGGC	1 cut(s)	771
KroNI	GCCGGC	1 cut(s)	773
Kzo9I	GATC	8 cut(s)	64, 152, 202, 238, 490, 594, 600, 622
LmnI	GCTCC	1 cut(s)	1059
Lsp1109I	GCAGC	5 cut(s)	490, 535, 868, 1429, 1544
LweI	GCATC	5 cut(s)	208, 755, 986, 1534, 1555
MaeI	CTAG	4 cut(s)	11, 227, 866, 1356
MaeII	ACGT	3 cut(s)	393, 536, 1587
MaeIII	GTNAC	3 cut(s)	902, 1339, 1704
MalI	GATC	8 cut(s)	66, 154, 204, 240, 492, 596, 602, 624
MbiI	CCGCTC	1 cut(s)	343
MboI	GATC	8 cut(s)	64, 152, 202, 238, 490, 594, 600, 622
MfeI	CAATTG	3 cut(s)	1254, 1421, 1569
MflI	RGATCY	4 cut(s)	64, 202, 238, 594
MhlI	GDGCHC	4 cut(s)	519, 733, 828, 1185
MlsI	TGGCCA	1 cut(s)	380
MluCI	AATT	9 cut(s)	698, 720, 1152, 1254, 1421, 1569, 1575, 1595, 1617
MluNI	TGGCCA	1 cut(s)	380
MlyI	GAGTC	5 cut(s)	29, 767, 803, 1070, 1178
MmeI	TCCRAC	1 cut(s)	457
Mox20I	TGGCCA	1 cut(s)	380
MroNI	GCCGGC	1 cut(s)	771
MroXI	GAANNNNTTC	1 cut(s)	109
MscI	TGGCCA	1 cut(s)	380
MseI	TTAA	3 cut(s)	971, 1197, 1593
MslI	CAYNNNNRTG	2 cut(s)	848, 911
Msp20I	TGGCCA	1 cut(s)	380
MspA1I	CMGCKG	1 cut(s)	764
MspCI	CTTAAG	1 cut(s)	1196
MunI	CAATTG	3 cut(s)	1254, 1421, 1569
Mva1269I	GAATGC	2 cut(s)	578, 1087
MvaI	CCWGG	4 cut(s)	371, 377, 1113, 1239
MvnI	CGCG	3 cut(s)	56, 350, 497
MwoI	GCNNNNNNNGC	9 cut(s)	323, 366, 494, 503, 523, 642, 845, 854, 1660
NaeI	GCCGGC	1 cut(s)	773
NdeI	CATATG	1 cut(s)	788
NdeII	GATC	8 cut(s)	64, 152, 202, 238, 490, 594, 600, 622
NgoMIV	GCCGGC	1 cut(s)	771
NlaIII	CATG	5 cut(s)	385, 523, 668, 847, 1297
NlaIV	GGNNCC	8 cut(s)	60, 66, 204, 294, 441, 468, 1685, 1777
NmeAIII	GCCGAG	2 cut(s)	222, 390
NmuCI	GTSAC	1 cut(s)	1704
NspI	RCATGY	3 cut(s)	523, 668, 1297
PaeI	GCATGC	1 cut(s)	1297
PceI	AGGCCT	1 cut(s)	608
PcsI	WCGNNNNNNNCGW	1 cut(s)	285
PctI	GAATGC	2 cut(s)	578, 1087
PdiI	GCCGGC	1 cut(s)	773
PdmI	GAANNNNTTC	1 cut(s)	109
PfeI	GAWTC	3 cut(s)	51, 460, 812
PflMI	CCANNNNNTGG	1 cut(s)	476
PinAI	ACCGGT	1 cut(s)	561
PkrI	GCNGC	6 cut(s)	403, 505, 525, 883, 1444, 1534
PleI	GAGTC	5 cut(s)	29, 766, 802, 1069, 1177
PmaCI	CACGTG	1 cut(s)	394
PmlI	CACGTG	1 cut(s)	394
PpsI	GAGTC	5 cut(s)	29, 766, 802, 1069, 1177
Ppu21I	YACGTR	2 cut(s)	394, 537
PpuMI	RGGWCCY	1 cut(s)	1683
Psp5II	RGGWCCY	1 cut(s)	1683
Psp6I	CCWGG	4 cut(s)	369, 375, 1111, 1237
PspCI	CACGTG	1 cut(s)	394
PspFI	CCCAGC	2 cut(s)	69, 547
PspGI	CCWGG	4 cut(s)	369, 375, 1111, 1237
PspN4I	GGNNCC	8 cut(s)	60, 66, 204, 294, 441, 468, 1685, 1777
PspPPI	RGGWCCY	1 cut(s)	1683
PsuI	RGATCY	4 cut(s)	64, 202, 238, 594
PvuII	CAGCTG	1 cut(s)	764
RsaI	GTAC	3 cut(s)	314, 1020, 1586
RsaNI	GTAC	3 cut(s)	313, 1019, 1585
RseI	CAYNNNNRTG	2 cut(s)	848, 911
SaqAI	TTAA	3 cut(s)	971, 1197, 1593
SatI	GCNGC	6 cut(s)	402, 504, 524, 882, 1443, 1533
Sau3AI	GATC	8 cut(s)	64, 152, 202, 238, 490, 594, 600, 622
SchI	GAGTC	5 cut(s)	29, 767, 803, 1070, 1178
SduI	GDGCHC	4 cut(s)	519, 733, 828, 1185
SfaNI	GCATC	5 cut(s)	208, 755, 986, 1534, 1555
SfcI	CTRYAG	1 cut(s)	412
SinI	GGWCC	7 cut(s)	293, 373, 451, 559, 564, 1490, 1683
SmaI	CCCGGG	1 cut(s)	269
SmiMI	CAYNNNNRTG	2 cut(s)	848, 911
SmlI	CTYRAG	4 cut(s)	257, 821, 1196, 1780
SmoI	CTYRAG	4 cut(s)	257, 821, 1196, 1780
SphI	GCATGC	1 cut(s)	1297
Sse9I	AATT	9 cut(s)	698, 720, 1152, 1254, 1421, 1569, 1575, 1595, 1617
SseBI	AGGCCT	1 cut(s)	608
SspMI	CTAG	4 cut(s)	11, 227, 866, 1356
StuI	AGGCCT	1 cut(s)	608
StyI	CCWWGG	1 cut(s)	609
TaaI	ACNGT	5 cut(s)	413, 728, 967, 1076, 1794
TaiI	ACGT	3 cut(s)	396, 539, 1590
TaqI	TCGA	5 cut(s)	339, 429, 603, 1733, 1739
TasI	AATT	9 cut(s)	698, 720, 1152, 1254, 1421, 1569, 1575, 1595, 1617
TauI	GCSGC	1 cut(s)	404
TfiI	GAWTC	3 cut(s)	51, 460, 812
Tru1I	TTAA	3 cut(s)	971, 1197, 1593
Tru9I	TTAA	3 cut(s)	971, 1197, 1593
TscAI	CASTG	3 cut(s)	625, 970, 1713
TseFI	GTSAC	1 cut(s)	1704
TseI	GCWGC	5 cut(s)	503, 523, 881, 1442, 1532
Tsp45I	GTSAC	1 cut(s)	1704
TspDTI	ATGAA	3 cut(s)	825, 1232, 1323
TspGWI	ACGGA	3 cut(s)	7, 1288, 1483
TspMI	CCCGGG	1 cut(s)	267
TspRI	CASTG	3 cut(s)	625, 970, 1713
Van91I	CCANNNNNTGG	1 cut(s)	476
Vha464I	CTTAAG	1 cut(s)	1196
VpaK11BI	GGWCC	7 cut(s)	293, 373, 451, 559, 564, 1490, 1683
XapI	RAATTY	3 cut(s)	720, 1152, 1575
XceI	RCATGY	3 cut(s)	523, 668, 1297
XmaI	CCCGGG	1 cut(s)	267
XmnI	GAANNNNTTC	1 cut(s)	109
XspI	CTAG	4 cut(s)	11, 227, 866, 1356

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.