Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb5

Orthogroup ID

OG0014571

Physical Location & Seq

Genomic Coordinates Forward (+)

6547682 .. 6551746

Gene Structure 4065 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_5g11550.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1812 bp

ATGCCGGGATTAGTCTCCGTCAAAACCCCGCCGGACTCGGTGCCGCTCCAAATCTCCGTCCCGGAGTCCGCCTCTTCCCAGCCGCAGAGATCCTCCCCGGCGGGGCCTTCCAAACCGCCGTCGCCGCTCGCCAGAAAGACACCGTCCCCCTCCGCCTCCGCCTCCGCCTCCCGATCCCGGCCATCGCCGAACCGGCTCAAGTCCAAATCGCTTCAGCCGGAGCCGATCCTCGCCGACGCCTCGCTCGACAACCCGGATCTCGGCCCGTTTCTCCTCAAGCTGGCCCGGGACACCATCGCCTCCGGCGAGGGACCGAACAAGGCGCTGGACTTCGCCGTCCGCGCGGCCAAGTCGTTCGAGCGGTGCGCCGTCGACGGCGAGCCCAGCCTGGACCTGGTGATGAGCCTGCACGTGCTGGCGGCTATCTACTGTAGCTTGGGCCGGTTCGAGGAGGCGGTTCCGGTTCTGGACCGGGCGATTCTGGTCCCTGAAATCGGGAGAGGTGCGGATCACGCGCTGGCGGCGTTCTCGGGGCATATGCAGTTGGGGGACACGTACTCGATGCTGGGCCTAGTGGACCGGTCCATTGAGTGCTATGAGGAAGGGTTGAAGATCCAGATCGAGGCCTTGGGTGAGACTGATCCCAGAGTCGGCGAGACATGCAGATATCTAGCAGAGGCTCATGTCCAAGCAATGCAGTTTGATAGAGCTGACGAGTTGTGCAAGAAAACTCTTGAAATCCACCGTGCTCATAGTGAACCAGCATCTATTGAGGAGGCAGCTGATCGCCGACTGATGGCTCTTATATGTGAGGCAAAGGGAGATTATGAAGCAGCACTTGAACACCTTGTCCTTGCTAGCATGTCGATGATTGCAAATGCACAAGAAAATGAGGTTGCTACTATTGATGTCAGCATCGGCAACATTTACATGTCTCTTTGTCGCTTTGATGAGGCTGTCTTCTCCTATCAGAAGGCACTCACTGTTCTAAAGTCATCAAGGGGAGATAACCACCCTTCAGTTGCCTCCATCTTTGTACGCCTTGCTGACCTATATCATAAGACTGGAAAGCTCCGAGAGTCCAAATCGTACTGTGAGAATGCCCTGAGGATATATGTGAAACCTGTGCCTGGAACAACAGCAGAAGAGATTTCGAGTGGATTGACTGAAATTTCAGCTATTTATGAGTCCATAGACGAGCCAGAGGAGGCACTTAAGTTATTACAAAAGGCGATGAGTTTGTTAGAGGATAAACCTGGACAGCAGAGCACAATTGCTGGAATAGAAGCAAGGATGGGAGTGATGTATTGTATGCTTGGGAGATATGAAGAAGCAAGGAGCTCTTTTGGAAGTGCTATTGCGAAACTTAGAGCTAGTGGAGAGAAGAAGTCTCCCTTCTTTGGGGTTGTGTTGAACCAGATGGGATTGGCTTGCGTTCAATTGTTCAAGATAGATGAGGCGGGTGAGTTGTTTGAAGAAGCGAGGAGTATATTAGAAAAAGAGTGTGGTCCTTGTCATCAAGATACTCTTGGAGTGTATAGCAATCTTGCAGCAACTTATGATGCTATGGGGAGAGTTGAAGATGCAATTGAAATTTTGGAGTATGTGCTTAAATTGCGAGAAGAAAAGCTTGGAATTGCAAATCCTGATTTTGAAGATGAGAAGAGAAGACTATCTGAGCTCCTGAAAGAAGCAGGCAGGAAGCGAGACAAAAAAGCGAAGTCACTGGAAAACCTCATTGATCCAAACTCGAAGAAGACTACGAAGAAAGAGGGGACAAGGAGGTGGGCTAGCCTGGGTTTCAGACTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002009 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005856 GO:0005874 GO:0005886 GO:0005929 GO:0006996 GO:0007275 GO:0007369 GO:0008150 GO:0009653 GO:0009790 GO:0009888 GO:0009966 GO:0009968 GO:0009987 GO:0010646 GO:0010648 GO:0015630 GO:0016020 GO:0016043 GO:0022603 GO:0022607 GO:0023051 GO:0023057 GO:0030030 GO:0030031 GO:0030111 GO:0030178 GO:0032501 GO:0032502 GO:0042995 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0044085 GO:0044422 GO:0044424 GO:0044430 GO:0044446 GO:0044464 GO:0044782 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0048598 GO:0048729 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0051239 GO:0060026 GO:0060027 GO:0060271 GO:0060429 GO:0060828 GO:0065007 GO:0070925 GO:0071840 GO:0071944 GO:0090090 GO:0090175 GO:0099080 GO:0099081 GO:0099512 GO:0099513 GO:0120025 GO:0120031 GO:0120036 GO:1905330 GO:2000026 GO:2000027 GO:2000050 GO:2000095

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

TPR_10 TPR_12 TPR_8

Protein Analysis

604

Amino Acids

65.88

Weight (kDa)

5.51

Isoelectric Point (pI)

53.53

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TPR_12	PF13424	135 - 206	3.8e-06	Tetratricopeptide repeat
TPR_MalT	PF17874	137 - 288	5.9e-09	MalT-like TPR region
TPR_MalT	PF17874	266 - 419	1.5e-08	MalT-like TPR region
TPR_NPHP3	PF24885	292 - 424	1.7e-09	Nephrocystin-3 TPR domain
TPR_12	PF13424	299 - 360	2.9e-09	Tetratricopeptide repeat
TPR_12	PF13424	341 - 416	1.5e-09	Tetratricopeptide repeat
TPR_12	PF13424	470 - 525	1.4e-06	Tetratricopeptide repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0014571)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G10840
fragaria_vesca	FvH4_5g11550 FvH4_5g11550 FvH4_5g11550
malus_domestica	MD06G1112100.v1.1 MD14G1133500.v1.1
prunus_persica	Prupe.5G125200_v2.0.a1
pyrus_communis	pycom06g10510
rosa_chinensis	RchiOBHm_Chr7g0186201
rosa_laevigata	RLG00000004856
rosa_multiflora	Rmu_sc0002609.1_g000006
rosa_roxburghii	Rroxscaffold_3G00268320
rosa_rugosa	Rorug06G0472700
rosa_samantha	Rh7BG084400 Rh7CG079400 Rh7DG079900
rosa_wichuraiana	Rw7G006640

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	335
AccB1I	GGYRCC	1 cut(s)	40
AccBSI	CCGCTC	3 cut(s)	46, 127, 361
AccI	GTMKAC	1 cut(s)	372
AccII	CGCG	3 cut(s)	342, 344, 515
AclWI	GGATC	8 cut(s)	84, 168, 220, 264, 516, 607, 635, 1736
AcoI	YGGCCR	2 cut(s)	179, 345
AcsI	RAATTY	2 cut(s)	1170, 1593
AcuI	CTGAAG	2 cut(s)	197, 1002
AcvI	CACGTG	1 cut(s)	412
AcyI	GRCGYC	1 cut(s)	237
AfaI	GTAC	3 cut(s)	557, 1038, 1091
AflII	CTTAAG	1 cut(s)	1214
AflIII	ACRYGT	2 cut(s)	552, 930
AgeI	ACCGGT	1 cut(s)	579
AjnI	CCWGG	5 cut(s)	387, 393, 1129, 1255, 1794
AjuI	GAANNNNNNNTTGG	2 cut(s)	1614, 1646
AloI	GAACNNNNNNTCC	2 cut(s)	834, 866
Alw21I	GWGCWC	4 cut(s)	751, 1271, 1343, 1683
Alw26I	GTCTC	6 cut(s)	19, 629, 650, 939, 1395, 1701
AlwI	GGATC	8 cut(s)	84, 168, 220, 264, 516, 607, 635, 1736
Ama87I	CYCGRG	2 cut(s)	285, 529
AoxI	GGCC	8 cut(s)	104, 179, 262, 282, 345, 439, 568, 624
ApeKI	GCWGC	3 cut(s)	779, 833, 1550
ApoI	RAATTY	2 cut(s)	1170, 1593
AsiGI	ACCGGT	1 cut(s)	579
AspLEI	GCGC	4 cut(s)	325, 344, 368, 517
AsuC2I	CCSGG	8 cut(s)	6, 62, 98, 178, 254, 286, 287, 473
AsuHPI	GGTGA	3 cut(s)	409, 644, 1475
AsuNHI	GCTAGC	2 cut(s)	857, 1790
AvaI	CYCGRG	2 cut(s)	285, 529
AvaII	GGWCC	7 cut(s)	311, 391, 469, 484, 577, 582, 1508
AxyI	CCTNAGG	1 cut(s)	1106
BanI	GGYRCC	1 cut(s)	40
BanII	GRGCYC	3 cut(s)	384, 1343, 1683
BbrPI	CACGTG	1 cut(s)	412
BbsI	GAAGAC	3 cut(s)	952, 1675, 1763
Bbv12I	GWGCWC	4 cut(s)	751, 1271, 1343, 1683
BbvI	GCAGC	3 cut(s)	791, 845, 1562
BccI	CCATC	6 cut(s)	190, 302, 790, 1037, 1288, 1414
BceAI	ACGGC	4 cut(s)	103, 320, 353, 391
BciT130I	CCWGG	5 cut(s)	389, 395, 1131, 1257, 1796
BcnI	CCSGG	8 cut(s)	6, 62, 98, 178, 254, 286, 287, 473
BcoDI	GTCTC	6 cut(s)	19, 629, 650, 939, 1395, 1701
BfaI	CTAG	5 cut(s)	572, 671, 858, 1374, 1791
BfmI	CTRYAG	1 cut(s)	430
BfoI	RGCGCY	1 cut(s)	326
BfrI	CTTAAG	1 cut(s)	1214
BglI	GCCNNNNNGGC	1 cut(s)	193
BisI	GCNGC	9 cut(s)	44, 83, 125, 345, 420, 522, 780, 834, 1551
BlsI	GCNGC	9 cut(s)	45, 84, 126, 346, 421, 523, 781, 835, 1552
Bme18I	GGWCC	7 cut(s)	311, 391, 469, 484, 577, 582, 1508
BmeT110I	CYCGRG	2 cut(s)	285, 529
BmiI	GGNNCC	6 cut(s)	42, 105, 222, 312, 459, 486
BmsI	GCATC	5 cut(s)	552, 773, 924, 1552, 1573
BmtI	GCTAGC	2 cut(s)	861, 1794
BpiI	GAAGAC	3 cut(s)	952, 1675, 1763
BplI	GAGNNNNNCTC	2 cut(s)	56, 88
BpuEI	CTTGAG	2 cut(s)	182, 260
BpuMI	CCSGG	8 cut(s)	6, 62, 98, 178, 254, 286, 287, 473
BsaAI	YACGTR	2 cut(s)	412, 555
BsaBI	GATNNNNATC	1 cut(s)	617
BsaHI	GRCGYC	1 cut(s)	237
BsaJI	CCNNGG	4 cut(s)	96, 285, 627, 1795
BsaWI	WCCGGW	2 cut(s)	460, 579
Bse118I	RCCGGY	3 cut(s)	192, 441, 579
Bse1I	ACTGG	2 cut(s)	1069, 1731
Bse21I	CCTNAGG	1 cut(s)	1106
Bse3DI	GCAATG	1 cut(s)	699
Bse8I	GATNNNNATC	1 cut(s)	617
BseBI	CCWGG	5 cut(s)	389, 395, 1131, 1257, 1796
BseDI	CCNNGG	4 cut(s)	96, 285, 627, 1795
BseGI	GGATG	1 cut(s)	1299
BseJI	GATNNNNATC	1 cut(s)	617
BseMI	GCAATG	1 cut(s)	699
BseMII	CTCAG	2 cut(s)	1097, 1668
BseNI	ACTGG	2 cut(s)	1069, 1731
BseRI	GAGGAG	5 cut(s)	263, 464, 788, 1220, 1498
BseXI	GCAGC	3 cut(s)	791, 845, 1562
BseYI	CCCAGC	3 cut(s)	78, 383, 565
BsgI	GTGCAG	1 cut(s)	392
Bsh1236I	CGCG	3 cut(s)	342, 344, 515
BshFI	GGCC	8 cut(s)	106, 181, 264, 284, 347, 441, 570, 626
BshNI	GGYRCC	1 cut(s)	40
BshTI	ACCGGT	1 cut(s)	579
BsiHKAI	GWGCWC	4 cut(s)	751, 1271, 1343, 1683
BsiHKCI	CYCGRG	2 cut(s)	285, 529
BslFI	GGGAC	7 cut(s)	44, 130, 302, 324, 470, 563, 1789
BsmAI	GTCTC	6 cut(s)	19, 629, 650, 939, 1395, 1701
BsmFI	GGGAC	7 cut(s)	44, 130, 302, 324, 470, 563, 1789
BsmI	GAATGC	1 cut(s)	1105
BsnI	GGCC	8 cut(s)	106, 181, 264, 284, 347, 441, 570, 626
BsoBI	CYCGRG	2 cut(s)	285, 529
Bsp1286I	GDGCHC	5 cut(s)	384, 751, 1271, 1343, 1683
BspANI	GGCC	8 cut(s)	106, 181, 264, 284, 347, 441, 570, 626
BspCNI	CTCAG	2 cut(s)	1098, 1669
BspFNI	CGCG	3 cut(s)	342, 344, 515
BspLI	GGNNCC	6 cut(s)	42, 105, 222, 312, 459, 486
BspOI	GCTAGC	2 cut(s)	861, 1794
BspPI	GGATC	8 cut(s)	84, 168, 220, 264, 516, 607, 635, 1736
BspT107I	GGYRCC	1 cut(s)	40
BspTI	CTTAAG	1 cut(s)	1214
BsrBI	CCGCTC	3 cut(s)	46, 127, 361
BsrDI	GCAATG	1 cut(s)	699
BsrFI	RCCGGY	3 cut(s)	192, 441, 579
BsrI	ACTGG	2 cut(s)	1069, 1731
BssAI	RCCGGY	3 cut(s)	192, 441, 579
BssECI	CCNNGG	4 cut(s)	96, 285, 627, 1795
BssNI	GRCGYC	1 cut(s)	237
BssT1I	CCWWGG	1 cut(s)	627
Bst2UI	CCWGG	5 cut(s)	389, 395, 1131, 1257, 1796
Bst4CI	ACNGT	5 cut(s)	144, 431, 746, 985, 1094
Bst6I	CTCTTC	3 cut(s)	79, 1140, 1658
BstACI	GRCGYC	1 cut(s)	237
BstAFI	CTTAAG	1 cut(s)	1214
BstBAI	YACGTR	2 cut(s)	412, 555
BstDEI	CTNAG	3 cut(s)	1106, 1367, 1677
BstF5I	GGATG	1 cut(s)	1299
BstFNI	CGCG	3 cut(s)	342, 344, 515
BstH2I	RGCGCY	1 cut(s)	326
BstHHI	GCGC	4 cut(s)	325, 344, 368, 517
BstMAI	GTCTC	6 cut(s)	19, 629, 650, 939, 1395, 1701
BstMWI	GCNNNNNNNGC	8 cut(s)	124, 193, 341, 384, 512, 521, 660, 1615
BstNI	CCWGG	5 cut(s)	389, 395, 1131, 1257, 1796
BstNSI	RCATGY	3 cut(s)	663, 865, 934
BstSFI	CTRYAG	1 cut(s)	430
BstUI	CGCG	3 cut(s)	342, 344, 515
BstV1I	GCAGC	3 cut(s)	791, 845, 1562
BstV2I	GAAGAC	3 cut(s)	952, 1675, 1763
BstX2I	RGATCY	3 cut(s)	89, 256, 612
BstYI	RGATCY	3 cut(s)	89, 256, 612
Bsu36I	CCTNAGG	1 cut(s)	1106
BsuRI	GGCC	8 cut(s)	106, 181, 264, 284, 347, 441, 570, 626
BtgZI	GCGATG	3 cut(s)	168, 280, 1247
BtsCI	GGATG	1 cut(s)	1299
BtsIMutI	CAGTG	2 cut(s)	981, 1724
CfoI	GCGC	4 cut(s)	325, 344, 368, 517
Cfr10I	RCCGGY	3 cut(s)	192, 441, 579
Cfr9I	CCCGGG	1 cut(s)	285
CseI	GACGC	1 cut(s)	245
CsiI	ACCWGGT	1 cut(s)	393
Csp6I	GTAC	3 cut(s)	556, 1037, 1090
CspAI	ACCGGT	1 cut(s)	579
CviAII	CATG	4 cut(s)	660, 683, 862, 931
CviQI	GTAC	3 cut(s)	556, 1037, 1090
DdeI	CTNAG	3 cut(s)	1106, 1367, 1677
DrdI	GACNNNNNNGTC	1 cut(s)	335
DseDI	GACNNNNNNGTC	1 cut(s)	335
EaeI	YGGCCR	2 cut(s)	179, 345
Eam1104I	CTCTTC	3 cut(s)	79, 1140, 1658
EarI	CTCTTC	3 cut(s)	79, 1140, 1658
EciI	GGCGGA	4 cut(s)	58, 142, 148, 154
Ecl136II	GAGCTC	2 cut(s)	1341, 1681
Eco130I	CCWWGG	1 cut(s)	627
Eco147I	AGGCCT	1 cut(s)	626
Eco24I	GRGCYC	3 cut(s)	384, 1343, 1683
Eco32I	GATATC	1 cut(s)	668
Eco47I	GGWCC	7 cut(s)	311, 391, 469, 484, 577, 582, 1508
Eco53kI	GAGCTC	2 cut(s)	1341, 1681
Eco57I	CTGAAG	2 cut(s)	197, 1002
Eco72I	CACGTG	1 cut(s)	412
Eco81I	CCTNAGG	1 cut(s)	1106
Eco88I	CYCGRG	2 cut(s)	285, 529
EcoICRI	GAGCTC	2 cut(s)	1341, 1681
EcoO109I	RGGNCCY	1 cut(s)	104
EcoRII	CCWGG	5 cut(s)	387, 393, 1129, 1255, 1794
EcoRV	GATATC	1 cut(s)	668
EcoT14I	CCWWGG	1 cut(s)	627
EcoT38I	GRGCYC	3 cut(s)	384, 1343, 1683
ErhI	CCWWGG	1 cut(s)	627
FaeI	CATG	4 cut(s)	663, 686, 865, 934
FaqI	GGGAC	7 cut(s)	44, 130, 302, 324, 470, 563, 1789
FatI	CATG	4 cut(s)	659, 682, 861, 930
FauI	CCCGC	3 cut(s)	36, 94, 1453
FauNDI	CATATG	1 cut(s)	537
FblI	GTMKAC	1 cut(s)	372
Fnu4HI	GCNGC	9 cut(s)	44, 83, 125, 345, 420, 522, 780, 834, 1551
FokI	GGATG	1 cut(s)	1306
FriOI	GRGCYC	3 cut(s)	384, 1343, 1683
Fsp4HI	GCNGC	9 cut(s)	44, 83, 125, 345, 420, 522, 780, 834, 1551
FspBI	CTAG	5 cut(s)	572, 671, 858, 1374, 1791
GlaI	GCGC	4 cut(s)	324, 343, 367, 516
GluI	GCNGC	9 cut(s)	44, 83, 125, 345, 420, 522, 780, 834, 1551
GsaI	CCCAGC	3 cut(s)	82, 387, 569
HaeII	RGCGCY	1 cut(s)	326
HaeIII	GGCC	8 cut(s)	106, 181, 264, 284, 347, 441, 570, 626
HgaI	GACGC	1 cut(s)	245
HhaI	GCGC	4 cut(s)	325, 344, 368, 517
Hin1I	GRCGYC	1 cut(s)	237
Hin1II	CATG	4 cut(s)	663, 686, 865, 934
Hin6I	GCGC	4 cut(s)	323, 342, 366, 515
HinP1I	GCGC	4 cut(s)	323, 342, 366, 515
HincII	GTYRAC	1 cut(s)	373
HindII	GTYRAC	1 cut(s)	373
HindIII	AAGCTT	1 cut(s)	1628
HinfI	GANTC	6 cut(s)	35, 65, 478, 648, 1079, 1187
HphI	GGTGA	3 cut(s)	409, 644, 1475
Hpy166II	GTNNAC	3 cut(s)	373, 577, 758
Hpy188I	TCNGA	4 cut(s)	972, 1076, 1678, 1805
Hpy188III	TCNNGA	9 cut(s)	171, 467, 496, 616, 734, 1447, 1520, 1646, 1684
Hpy8I	GTNNAC	3 cut(s)	373, 577, 758
Hpy99I	CGWCG	4 cut(s)	124, 239, 374, 377
HpyAV	CCTTC	5 cut(s)	117, 596, 967, 1026, 1405
HpyCH4III	ACNGT	5 cut(s)	144, 431, 746, 985, 1094
HpyCH4IV	ACGT	2 cut(s)	411, 554
HpyF10VI	GCNNNNNNNGC	8 cut(s)	124, 193, 341, 384, 512, 521, 660, 1615
HpyF3I	CTNAG	3 cut(s)	1106, 1367, 1677
HpySE526I	ACGT	2 cut(s)	411, 554
Hsp92I	GRCGYC	1 cut(s)	237
Hsp92II	CATG	4 cut(s)	663, 686, 865, 934
HspAI	GCGC	4 cut(s)	323, 342, 366, 515
LmnI	GCTCC	5 cut(s)	51, 220, 1077, 1338, 1686
Lsp1109I	GCAGC	3 cut(s)	791, 845, 1562
LweI	GCATC	5 cut(s)	552, 773, 924, 1552, 1573
MabI	ACCWGGT	1 cut(s)	393
MaeI	CTAG	5 cut(s)	572, 671, 858, 1374, 1791
MaeII	ACGT	2 cut(s)	411, 554
MaeIII	GTNAC	1 cut(s)	1722
MbiI	CCGCTC	3 cut(s)	46, 127, 361
MfeI	CAATTG	3 cut(s)	1272, 1439, 1587
MflI	RGATCY	3 cut(s)	89, 256, 612
MhlI	GDGCHC	5 cut(s)	384, 751, 1271, 1343, 1683
MluCI	AATT	7 cut(s)	1170, 1272, 1439, 1587, 1593, 1613, 1635
MlyI	GAGTC	5 cut(s)	29, 74, 657, 1088, 1196
MseI	TTAA	2 cut(s)	1215, 1611
MslI	CAYNNNNRTG	2 cut(s)	866, 929
MspA1I	CMGCKG	1 cut(s)	782
MspCI	CTTAAG	1 cut(s)	1214
MunI	CAATTG	3 cut(s)	1272, 1439, 1587
Mva1269I	GAATGC	1 cut(s)	1105
MvaI	CCWGG	5 cut(s)	389, 395, 1131, 1257, 1796
MvnI	CGCG	3 cut(s)	342, 344, 515
MwoI	GCNNNNNNNGC	8 cut(s)	124, 193, 341, 384, 512, 521, 660, 1615
NciI	CCSGG	8 cut(s)	6, 62, 98, 178, 254, 286, 287, 473
NdeI	CATATG	1 cut(s)	537
NheI	GCTAGC	2 cut(s)	857, 1790
NlaIII	CATG	4 cut(s)	663, 686, 865, 934
NlaIV	GGNNCC	6 cut(s)	42, 105, 222, 312, 459, 486
NmeAIII	GCCGAG	1 cut(s)	240
NmuCI	GTSAC	1 cut(s)	1722
NspI	RCATGY	3 cut(s)	663, 865, 934
PceI	AGGCCT	1 cut(s)	626
PciI	ACATGT	1 cut(s)	930
PcsI	WCGNNNNNNNCGW	2 cut(s)	243, 303
PctI	GAATGC	1 cut(s)	1105
PfeI	GAWTC	1 cut(s)	478
PflFI	GACNNNGTC	1 cut(s)	142
PfoI	TCCNGGA	1 cut(s)	60
PinAI	ACCGGT	1 cut(s)	579
PkrI	GCNGC	9 cut(s)	45, 84, 126, 346, 421, 523, 781, 835, 1552
PleI	GAGTC	5 cut(s)	29, 73, 656, 1087, 1195
PmaCI	CACGTG	1 cut(s)	412
PmlI	CACGTG	1 cut(s)	412
PpsI	GAGTC	5 cut(s)	29, 73, 656, 1087, 1195
Ppu21I	YACGTR	2 cut(s)	412, 555
PscI	ACATGT	1 cut(s)	930
Psp124BI	GAGCTC	2 cut(s)	1343, 1683
Psp6I	CCWGG	5 cut(s)	387, 393, 1129, 1255, 1794
PspCI	CACGTG	1 cut(s)	412
PspFI	CCCAGC	3 cut(s)	78, 383, 565
PspGI	CCWGG	5 cut(s)	387, 393, 1129, 1255, 1794
PspN4I	GGNNCC	6 cut(s)	42, 105, 222, 312, 459, 486
PsuI	RGATCY	3 cut(s)	89, 256, 612
PsyI	GACNNNGTC	1 cut(s)	142
PvuII	CAGCTG	1 cut(s)	782
RsaI	GTAC	3 cut(s)	557, 1038, 1091
RsaNI	GTAC	3 cut(s)	556, 1037, 1090
RseI	CAYNNNNRTG	2 cut(s)	866, 929
SacI	GAGCTC	2 cut(s)	1343, 1683
SalI	GTCGAC	1 cut(s)	371
SaqAI	TTAA	2 cut(s)	1215, 1611
SatI	GCNGC	9 cut(s)	44, 83, 125, 345, 420, 522, 780, 834, 1551
SchI	GAGTC	5 cut(s)	29, 74, 657, 1088, 1196
SduI	GDGCHC	5 cut(s)	384, 751, 1271, 1343, 1683
SexAI	ACCWGGT	1 cut(s)	393
SfaNI	GCATC	5 cut(s)	552, 773, 924, 1552, 1573
SfcI	CTRYAG	1 cut(s)	430
SgrDI	CGTCGACG	1 cut(s)	371
SinI	GGWCC	7 cut(s)	311, 391, 469, 484, 577, 582, 1508
SmaI	CCCGGG	1 cut(s)	287
SmiMI	CAYNNNNRTG	2 cut(s)	866, 929
SmlI	CTYRAG	3 cut(s)	197, 275, 1214
SmoI	CTYRAG	3 cut(s)	197, 275, 1214
Sse9I	AATT	7 cut(s)	1170, 1272, 1439, 1587, 1593, 1613, 1635
SseBI	AGGCCT	1 cut(s)	626
SspMI	CTAG	5 cut(s)	572, 671, 858, 1374, 1791
SstI	GAGCTC	2 cut(s)	1343, 1683
StuI	AGGCCT	1 cut(s)	626
StyI	CCWWGG	1 cut(s)	627
TaaI	ACNGT	5 cut(s)	144, 431, 746, 985, 1094
TaiI	ACGT	2 cut(s)	414, 557
TaqI	TCGA	9 cut(s)	246, 357, 372, 447, 560, 621, 866, 1154, 1751
TaqII	GACCGA	1 cut(s)	328
TasI	AATT	7 cut(s)	1170, 1272, 1439, 1587, 1593, 1613, 1635
TauI	GCSGC	6 cut(s)	46, 85, 127, 347, 422, 524
TfiI	GAWTC	1 cut(s)	478
Tru1I	TTAA	2 cut(s)	1215, 1611
Tru9I	TTAA	2 cut(s)	1215, 1611
TscAI	CASTG	2 cut(s)	988, 1731
TseFI	GTSAC	1 cut(s)	1722
TseI	GCWGC	3 cut(s)	779, 833, 1550
Tsp45I	GTSAC	1 cut(s)	1722
TspDTI	ATGAA	2 cut(s)	843, 1341
TspGWI	ACGGA	2 cut(s)	7, 46
TspMI	CCCGGG	1 cut(s)	285
TspRI	CASTG	2 cut(s)	988, 1731
Tth111I	GACNNNGTC	1 cut(s)	142
Vha464I	CTTAAG	1 cut(s)	1214
VpaK11BI	GGWCC	7 cut(s)	311, 391, 469, 484, 577, 582, 1508
XapI	RAATTY	2 cut(s)	1170, 1593
XceI	RCATGY	3 cut(s)	663, 865, 934
XcmI	CCANNNNNNNNNTGG	1 cut(s)	391
XmaI	CCCGGG	1 cut(s)	285
XmiI	GTMKAC	1 cut(s)	372
XspI	CTAG	5 cut(s)	572, 671, 858, 1374, 1791

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.