AT4G11670

Plant family of unknown function (DUF810)

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
Physical Location & Seq
Reverse (-)
7044401 .. 7053148
8748 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G11670.3

Sequence Viewer

Length: 3393 bp
ATGGATTCTCTGTTGCAGCGTTACCGGAACGATCGCCGCAAGCTCATGGAGTTTCTTATGTCTTCGGGTTTGGTAAAAGAGCTTCGTTCCCCTTCTGGTTCCCCTACTTCTCTTTCTCCGGCTGATTTGGATGCTCTCAGTGCCGATTATGTTTTAGATTGCGTGAAATCCGGTGGTGTAGTTGATGTATCCAAGGGCAGAGAGAAATACAATTTTGATTCATCATACCCTGTAACAATACACTCTGAGTCTGGAGATTCCTATTTTCTTGTGTCGAGTCCGGATTTAGCAGGTTCTCCTCCTCATCGTATGCCTCCTCCTCCAGTTAACATTGAAAAATCCAGTAACAATGGTGCAGACATGTCGCGTCACATGGATTCTTCTAATACTCCTTCAGCTAGAGACAACTATGTATTTAAAGAGGAAACACCTGACATCAAACCCGTGAAACCTATCAAAATCATTCCTCTTGGCTTGCCACCCTTGAGAACAGGGTTATCGGATGATGATTTACGAGAAGCAGCATATGAATTAATGATTGCTTCTATGTTGCTTTCAAGTTTCTTAACAAACAGTGTTGAGGCGTATCCTACTCATAGAAGAAAGATAGAAAAAAGCTCTAGACTAATGTTAAGTTTGAAAAGAAAAGATAAACCACATCTGCAGCCTCAGATCTCTAATACACACTCAGAGATTTCATCAAAGATGGATACATGCATACGGAGAAATCTGGTACAGTTGGCAACATTAAGGACAGGTGAACAAATTGATCTTCCACAGTTAGCATTGGGGCTTTTGGTTGGAATATTCAAATCAGATTTTCCTAATGAAAAGCTCTACATGAAGTGGAAGACTAGACAGGCTAACCTACTAGAAGAAGTCCTCTGTTTCTCACCTAGTCTGGAGAAAAACGAACGAGCAACTATGAGAAAATGCCTTGCAACGATTAGAGACTCAAAGGAATGGGATGTTGTAGTATCTGCTTCACTACGTATTGAGGTTCTATCGTCTATAAGGCAGGTGGCTTCAAAGTTGTCATCACTACCAGGCCGATGTGGTATTGAAGAAGAAACTTATTACTGGACTGCTATCTACCATTTGAACATTAGACTCTATGAGAAACTATTATTTGGTGTATTTGATACTCTTGATGAGGGTCAAGTCATAGAGGATGCCTCATCAATGCTTTTCCATATGAAATCAATTTGGTCGACATTGGGCATAACTGAGAATCTACATAGTGCAATATATGGATGGGTTCTTTTCCAACAGTTTGTGTGCACAGGTGAGCCTTCTCTTCTAGGGAGCACAATTCAGGAGTTGCAGAAAGTTACTTCTGCTGAAAGTGGCAACCCGAAGGAAGATCTTTATTTAAGTCATCTAGTATGTTCAAGGCAAACCATTGGAACTGACATACACTTAGGTCTTGTGAAGGCTATTTTAACTTCAGTTAGTGCTTGGTGTGATGATAAACTTCAGGACTATCATCTACACTTTGGTAAGAAACCTCGTGATTTTGGAATGCTTGTCAGATTGGCATCAACAGTTGGACTTCCTCCAGCTGACTGTACCAGAACTGAGCTTATCAAGCTGGATACCTTGAGTGATGATGTTAGTGATAAGATACAATCCTATGTTCAGAACTCTATCAAAGGTGCATGTGCCAGGGCTGCGCATTTTGCTTACGTGAAATCTCATGGTGAGCGTACGCATGCTCTAGCTCTGCTTGCAAATGAACTAACCGTCATCGCAAAAGTAGAGATCAACGAGTTTGTCCCAGTTTTCTCCAAATGGTTACCCGAATGTATGATGATCTCGGCCATGCTGCTACATCGGTTTTATGGAGAAAGACTGACACCTTTCCTCGAAGGAGTTTCATCCCTCTCTGGTGATGTTAGAAAAGTAGTCCCTGCTGCTTATATGTTACAGGAAGAGTTAACTCAACTGTATAATTGCCATAGCAAATCTAAGTTGCGCAAACCTTACTTCCATAAGTTGAAGAATTACGAGATAGAAAAGGCTGTCAAACCAGTAATGCTGGACTGGCTTATCTCTCAACATGATCATATCTTACAATGGACTAGGCGAGCTTTTGAAATCGAGGAGTGGGAGCCTCTATCAGTTCAACAAAGACATGCTGCATCAATCGTTGAAATATTCAGGATCATAGAAGAGACTGTGTCTCAGCTGTTTGGTTTACATCTACCTGTTGATATCACACATCTCCAAGCTCTTCTCTCATTAATTTACCATAGCTTGGATACTTATCTTCAGAGAGTTTTCGATCAACTAGTTGACAAGAAGTTTCTGTATCCGTCAGCTCCTCCTTTAACTCGATTCACAGAAAATGTAATGCCAGTAATGAAGAGGAAGTCACTCGAGTTTAGTGAGCCAGATAATAAAATAGTTAAGAAACTGGATGAACTGACGATACCAAAACTCTGCATAATATTGAATACACTCTGTTATATCCAGAAACAAATCAGTGCAACAGAAGTAGGCATAAGGAAATCTTTGACACTTGTTGAAGCCTCTCTCAACAAGAGATCAGAAATCGAGACTGATGAAGCTGAAGTGGAGAATTCACTGACGCATAGTGAAGCTGTTGATGAACTCTTTGCTACCACCTATGACAGCCTCAGGGACACCAATGCCAATTGCATAACCAAAACCCGTGACCTAATTGGGGCAAGAGCGATTTTCTGGGATCTGAGAGACATGTTCCTTATACAGTTGTACAATGGCACAGTCGAAGGCGCCCGCTTGGAAAGAATACTCCCTCACATTGATTCAGTCCTTGATACTGTATGCAGTTTGAGTTATGAGGACTCACGGGATATGGTGGTGTTAAGCATCTGCCGATCCGCTCTGGAAGCCTATGTTCGAGTACTACTTGATGGAGGGCCAACCCGTGCCTTTTCGGATTCTGACATCACCTTGATGGAAGAAGATCTCAGTATTTTGAAAGAGTTCTTCATTGCCGATGGGGAGGGACTTCCTCGTTCACTAGTTGAGCAAGAAGCGAAACAGGCGAAAGAGATCCTCGACTTGTACTCTCTCGAGAGCGATATGCTAATTCAGATGCTAATGACTGCGAGCGAGCTCATCAACATGGGGGTGAGTTCAGAGCAGCGGCGCTTGGAGGATGCACAAACTCTTGTTAGAGTTCTTTGCCACAAGAAAGATCGTAACGCCTCCAAATTCTTAAAGCGCCAGTACGAGCTTCCTATGTCAACAGAATATGAAGATGTAACATTGAATCTGCCTGCTTTATCCGAAATCGTGAGAAGCACATCCACTCACTGGAGCACAGCAAGCCAGAATAGTTTCAGTTCCATCAAGAAGAAGATTCAGGAGGCAACATCTGAAATCAGGAACAACTCAGGATGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1130

Amino Acids

127.96

Weight (kDa)

5.88

Isoelectric Point (pI)

49.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TPR_PATROL1 PF25761 682 - 1027 1.4e-71 PATROL1-like, TPR repeats
TPR_PATROL1 PF25761 1068 - 1114 7.3e-11 PATROL1-like, TPR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1009
Acc16I TGCGCA 2 cut(s) 1674, 1976
Acc36I ACCTGC 2 cut(s) 281, 1009
AccB1I GGYRCC 1 cut(s) 2756
AccB7I CCANNNNNTGG 2 cut(s) 2257, 3303
AccBSI CCGCTC 1 cut(s) 2867
AccI GTMKAC 1 cut(s) 1211
AccII CGCG 1 cut(s) 367
AccIII TCCGGA 1 cut(s) 280
AciI CCGC 4 cut(s) 37, 2761, 2865, 3133
AclWI GGATC 4 cut(s) 2171, 2715, 2856, 3034
AcoI YGGCCR 1 cut(s) 1818
AcsI RAATTY 2 cut(s) 2581, 3200
AcuI CTGAAG 5 cut(s) 378, 1431, 1460, 2255, 2592
AcyI GRCGYC 1 cut(s) 2757
AfaI GTAC 7 cut(s) 735, 1570, 1708, 2738, 2889, 3053, 3218
AfiI CCNNNNNNNGG 3 cut(s) 2257, 2686, 3303
AflIII ACRYGT 2 cut(s) 360, 2718
AhlI ACTAGT 2 cut(s) 2290, 3007
AjnI CCWGG 2 cut(s) 1045, 1664
Alw21I GWGCWC 4 cut(s) 1283, 1310, 3105, 3311
Alw26I GTCTC 6 cut(s) 396, 945, 2168, 2187, 2552, 2709
Alw44I GTGCAC 1 cut(s) 1279
AlwI GGATC 4 cut(s) 2171, 2715, 2856, 3034
Ama87I CYCGRG 2 cut(s) 2378, 3059
Aor13HI TCCGGA 1 cut(s) 280
AoxI GGCC 3 cut(s) 1048, 1818, 2903
ApaLI GTGCAC 1 cut(s) 1279
ApeKI GCWGC 8 cut(s) 16, 521, 664, 1670, 1825, 1913, 2138, 3130
ApoI RAATTY 2 cut(s) 2581, 3200
AseI ATTAAT 2 cut(s) 533, 2243
Asp700I GAANNNNTTC 2 cut(s) 2969, 3326
AspLEI GCGC 5 cut(s) 1675, 1977, 2759, 3138, 3213
AspS9I GGNCC 1 cut(s) 2903
AsuHPI GGTGA 7 cut(s) 770, 885, 1298, 1712, 1901, 2926, 3130
AvaI CYCGRG 2 cut(s) 2378, 3059
AxyI CCTNAGG 1 cut(s) 2639
BaeGI GKGCMC 1 cut(s) 1283
BanI GGYRCC 1 cut(s) 2756
BanII GRGCYC 1 cut(s) 3105
BarI GAAGNNNNNNTAC 2 cut(s) 66, 98
BauI CACGAG 1 cut(s) 1509
BbsI GAAGAC 2 cut(s) 54, 857
Bbv12I GWGCWC 4 cut(s) 1283, 1310, 3105, 3311
BbvI GCAGC 8 cut(s) 28, 533, 676, 1657, 1812, 1900, 2125, 3142
BccI CCATC 7 cut(s) 700, 1248, 2891, 2935, 2978, 3344, 3381
BcgI CGANNNNNNTGC 2 cut(s) 345, 379
BciT130I CCWGG 2 cut(s) 1047, 1666
BciVI GTATCC 6 cut(s) 199, 597, 703, 1588, 2254, 2322
BclI TGATCA 1 cut(s) 2062
BcoDI GTCTC 6 cut(s) 396, 945, 2168, 2187, 2552, 2709
BcuI ACTAGT 2 cut(s) 2290, 3007
BfmI CTRYAG 1 cut(s) 662
BfoI RGCGCY 3 cut(s) 2760, 3139, 3214
BfuAI ACCTGC 2 cut(s) 281, 1009
BfuI GTATCC 6 cut(s) 199, 597, 703, 1588, 2254, 2322
BglII AGATCT 3 cut(s) 672, 1363, 2950
BmcAI AGTACT 1 cut(s) 2889
Bme1390I CCNGG 2 cut(s) 1047, 1666
BmeT110I CYCGRG 2 cut(s) 2378, 3059
BmgT120I GGNCC 1 cut(s) 2903
BmiI GGNNCC 3 cut(s) 100, 2112, 2758
BmrFI CCNGG 2 cut(s) 1047, 1666
BmrI ACTGGG 1 cut(s) 1772
BmsI GCATC 7 cut(s) 121, 1162, 1547, 2150, 2862, 3072, 3136
BmuI ACTGGG 1 cut(s) 1772
BpiI GAAGAC 2 cut(s) 54, 857
BplI GAGNNNNNCTC 2 cut(s) 1160, 1192
BpmI CTGGAG 5 cut(s) 273, 306, 923, 1542, 3325
BpuEI CTTGAG 2 cut(s) 505, 1621
BsaAI YACGTR 2 cut(s) 992, 1687
BsaBI GATNNNNATC 2 cut(s) 1537, 2265
BsaHI GRCGYC 1 cut(s) 2757
BsaJI CCNNGG 2 cut(s) 192, 1665
BsaWI WCCGGW 3 cut(s) 24, 170, 280
Bsc4I CCNNNNNNNGG 3 cut(s) 2257, 2686, 3303
Bse21I CCTNAGG 1 cut(s) 2639
Bse3DI GCAATG 1 cut(s) 2976
Bse8I GATNNNNATC 2 cut(s) 1537, 2265
BseAI TCCGGA 1 cut(s) 280
BseBI CCWGG 2 cut(s) 1047, 1666
BseDI CCNNGG 2 cut(s) 192, 1665
BseJI GATNNNNATC 2 cut(s) 1537, 2265
BseLI CCNNNNNNNGG 3 cut(s) 2257, 2686, 3303
BseMI GCAATG 1 cut(s) 2976
BseRI GAGGAG 6 cut(s) 288, 291, 306, 309, 2117, 2313
BseSI GKGCMC 1 cut(s) 1283
BseXI GCAGC 8 cut(s) 28, 533, 676, 1657, 1812, 1900, 2125, 3142
BsgI GTGCAG 1 cut(s) 375
Bsh1236I CGCG 1 cut(s) 367
Bsh1285I CGRYCG 1 cut(s) 34
BshFI GGCC 3 cut(s) 1050, 1820, 2905
BshNI GGYRCC 1 cut(s) 2756
BsiEI CGRYCG 1 cut(s) 34
BsiHKAI GWGCWC 4 cut(s) 1283, 1310, 3105, 3311
BsiHKCI CYCGRG 2 cut(s) 2378, 3059
BsiSI CCGG 4 cut(s) 25, 119, 171, 281
BsiWI CGTACG 1 cut(s) 1706
BslFI GGGAC 4 cut(s) 1760, 1892, 2657, 3006
BslI CCNNNNNNNGG 3 cut(s) 2257, 2686, 3303
BsmAI GTCTC 6 cut(s) 396, 945, 2168, 2187, 2552, 2709
BsmFI GGGAC 4 cut(s) 1760, 1892, 2657, 3006
BsmI GAATGC 1 cut(s) 1527
BsnI GGCC 3 cut(s) 1050, 1820, 2905
BsoBI CYCGRG 2 cut(s) 2378, 3059
Bsp1286I GDGCHC 4 cut(s) 1283, 1310, 3105, 3311
Bsp13I TCCGGA 1 cut(s) 280
Bsp1407I TGTACA 1 cut(s) 2736
BspACI CCGC 4 cut(s) 37, 2761, 2865, 3133
BspANI GGCC 3 cut(s) 1050, 1820, 2905
BspEI TCCGGA 1 cut(s) 280
BspFNI CGCG 1 cut(s) 367
BspLI GGNNCC 3 cut(s) 100, 2112, 2758
BspMAI CTGCAG 1 cut(s) 666
BspMI ACCTGC 2 cut(s) 281, 1009
BspPI GGATC 4 cut(s) 2171, 2715, 2856, 3034
BspQI GCTCTTC 1 cut(s) 2238
BspT107I GGYRCC 1 cut(s) 2756
BsrBI CCGCTC 1 cut(s) 2867
BsrDI GCAATG 1 cut(s) 2976
BsrGI TGTACA 1 cut(s) 2736
BssECI CCNNGG 2 cut(s) 192, 1665
BssNI GRCGYC 1 cut(s) 2757
BssSI CACGAG 1 cut(s) 1509
BssT1I CCWWGG 1 cut(s) 192
Bst2BI CACGAG 1 cut(s) 1509
Bst2UI CCWGG 2 cut(s) 1047, 1666
Bst6I CTCTTC 5 cut(s) 1302, 1926, 2166, 2238, 2360
BstACI GRCGYC 1 cut(s) 2757
BstAUI TGTACA 1 cut(s) 2736
BstBAI YACGTR 2 cut(s) 992, 1687
BstEII GGTNACC 1 cut(s) 1794
BstFNI CGCG 1 cut(s) 367
BstH2I RGCGCY 3 cut(s) 2760, 3139, 3214
BstHHI GCGC 5 cut(s) 1675, 1977, 2759, 3138, 3213
BstMAI GTCTC 6 cut(s) 396, 945, 2168, 2187, 2552, 2709
BstMCI CGRYCG 1 cut(s) 34
BstMWI GCNNNNNNNGC 9 cut(s) 140, 1588, 1670, 1679, 1727, 2044, 2873, 3029, 3315
BstNI CCWGG 2 cut(s) 1047, 1666
BstNSI RCATGY 6 cut(s) 364, 717, 1662, 1715, 2138, 2722
BstPI GGTNACC 1 cut(s) 1794
BstSCI CCNGG 2 cut(s) 1045, 1664
BstSFI CTRYAG 1 cut(s) 662
BstSLI GKGCMC 1 cut(s) 1283
BstSNI TACGTA 1 cut(s) 992
BstUI CGCG 1 cut(s) 367
BstV1I GCAGC 8 cut(s) 28, 533, 676, 1657, 1812, 1900, 2125, 3142
BstV2I GAAGAC 2 cut(s) 54, 857
BstX2I RGATCY 5 cut(s) 672, 1363, 2707, 2950, 3039
BstYI RGATCY 5 cut(s) 672, 1363, 2707, 2950, 3039
Bsu36I CCTNAGG 1 cut(s) 2639
BsuI GTATCC 6 cut(s) 199, 597, 703, 1588, 2254, 2322
BsuRI GGCC 3 cut(s) 1050, 1820, 2905
BtgZI GCGATG 1 cut(s) 1732
BtsIMutI CAGTG 5 cut(s) 145, 580, 2491, 2585, 3301
BveI ACCTGC 2 cut(s) 281, 1009
CfoI GCGC 5 cut(s) 1675, 1977, 2759, 3138, 3213
Cfr13I GGNCC 1 cut(s) 2903
CseI GACGC 2 cut(s) 356, 2599
Csp6I GTAC 7 cut(s) 734, 1569, 1707, 2737, 2888, 3052, 3217
CviQI GTAC 7 cut(s) 734, 1569, 1707, 2737, 2888, 3052, 3217
DinI GGCGCC 1 cut(s) 2758
DraI TTTAAA 1 cut(s) 418
EaeI YGGCCR 1 cut(s) 1818
Eam1104I CTCTTC 5 cut(s) 1302, 1926, 2166, 2238, 2360
EarI CTCTTC 5 cut(s) 1302, 1926, 2166, 2238, 2360
Ecl136II GAGCTC 1 cut(s) 3103
Eco105I TACGTA 1 cut(s) 992
Eco130I CCWWGG 1 cut(s) 192
Eco24I GRGCYC 1 cut(s) 3105
Eco32I GATATC 1 cut(s) 2215
Eco53kI GAGCTC 1 cut(s) 3103
Eco57I CTGAAG 5 cut(s) 378, 1431, 1460, 2255, 2592
Eco81I CCTNAGG 1 cut(s) 2639
Eco88I CYCGRG 2 cut(s) 2378, 3059
Eco91I GGTNACC 1 cut(s) 1794
EcoICRI GAGCTC 1 cut(s) 3103
EcoO65I GGTNACC 1 cut(s) 1794
EcoRI GAATTC 1 cut(s) 2581
EcoRII CCWGG 2 cut(s) 1045, 1664
EcoRV GATATC 1 cut(s) 2215
EcoT14I CCWWGG 1 cut(s) 192
EcoT22I ATGCAT 1 cut(s) 719
EcoT38I GRGCYC 1 cut(s) 3105
EgeI GGCGCC 1 cut(s) 2758
EheI GGCGCC 1 cut(s) 2758
ErhI CCWWGG 1 cut(s) 192
FalI AAGNNNNNCTT 2 cut(s) 2497, 2529
FaqI GGGAC 4 cut(s) 1760, 1892, 2657, 3006
FauI CCCGC 1 cut(s) 2768
FauNDI CATATG 2 cut(s) 526, 1194
FbaI TGATCA 1 cut(s) 2062
FblI GTMKAC 1 cut(s) 1211
FokI GGATG 9 cut(s) 143, 515, 980, 1184, 1266, 1864, 2432, 3158, 3280
FriOI GRGCYC 1 cut(s) 3105
FspI TGCGCA 2 cut(s) 1674, 1976
GlaI GCGC 5 cut(s) 1674, 1976, 2758, 3137, 3212
GsuI CTGGAG 5 cut(s) 273, 306, 923, 1542, 3325
HaeII RGCGCY 3 cut(s) 2760, 3139, 3214
HaeIII GGCC 3 cut(s) 1050, 1820, 2905
HapII CCGG 4 cut(s) 25, 119, 171, 281
HgaI GACGC 2 cut(s) 356, 2599
HhaI GCGC 5 cut(s) 1675, 1977, 2759, 3138, 3213
Hin1I GRCGYC 1 cut(s) 2757
Hin6I GCGC 5 cut(s) 1673, 1975, 2757, 3136, 3211
HinP1I GCGC 5 cut(s) 1673, 1975, 2757, 3136, 3211
HincII GTYRAC 5 cut(s) 328, 1212, 1938, 2296, 3234
HindII GTYRAC 5 cut(s) 328, 1212, 1938, 2296, 3234
HpaI GTTAAC 2 cut(s) 328, 1938
HpaII CCGG 4 cut(s) 25, 119, 171, 281
HphI GGTGA 7 cut(s) 770, 885, 1298, 1712, 1901, 2926, 3130
Hpy166II GTNNAC 9 cut(s) 328, 761, 1212, 1281, 1938, 2198, 2296, 3005, 3234
Hpy8I GTNNAC 9 cut(s) 328, 761, 1212, 1281, 1938, 2198, 2296, 3005, 3234
HpyAV CCTTC 7 cut(s) 102, 402, 1302, 1351, 1426, 1862, 2747
HpyCH4IV ACGT 2 cut(s) 991, 1686
HpyF10VI GCNNNNNNNGC 9 cut(s) 140, 1588, 1670, 1679, 1727, 2044, 2873, 3029, 3315
HpySE526I ACGT 2 cut(s) 991, 1686
Hsp92I GRCGYC 1 cut(s) 2757
HspAI GCGC 5 cut(s) 1673, 1975, 2757, 3136, 3211
KasI GGCGCC 1 cut(s) 2756
Kpn2I TCCGGA 1 cut(s) 280
Ksp22I TGATCA 1 cut(s) 2062
KspAI GTTAAC 2 cut(s) 328, 1938
LguI GCTCTTC 1 cut(s) 2238
LmnI GCTCC 4 cut(s) 1305, 2110, 2326, 3306
Lsp1109I GCAGC 8 cut(s) 28, 533, 676, 1657, 1812, 1900, 2125, 3142
LweI GCATC 7 cut(s) 121, 1162, 1547, 2150, 2862, 3072, 3136
MaeII ACGT 2 cut(s) 991, 1686
MbiI CCGCTC 1 cut(s) 2867
MfeI CAATTG 1 cut(s) 2656
MflI RGATCY 5 cut(s) 672, 1363, 2707, 2950, 3039
MhlI GDGCHC 4 cut(s) 1283, 1310, 3105, 3311
Mly113I GGCGCC 1 cut(s) 2757
MlyI GAGTC 5 cut(s) 257, 286, 947, 1104, 2822
MmeI TCCRAC 3 cut(s) 781, 1291, 1528
Mph1103I ATGCAT 1 cut(s) 719
MroI TCCGGA 1 cut(s) 280
MroXI GAANNNNTTC 2 cut(s) 2969, 3326
MslI CAYNNNNRTG 3 cut(s) 2939, 3110, 3116
MspA1I CMGCKG 3 cut(s) 1562, 2188, 3133
MspI CCGG 4 cut(s) 25, 119, 171, 281
MspR9I CCNGG 2 cut(s) 1047, 1666
MunI CAATTG 1 cut(s) 2656
Mva1269I GAATGC 1 cut(s) 1527
MvaI CCWGG 2 cut(s) 1047, 1666
MvnI CGCG 1 cut(s) 367
MwoI GCNNNNNNNGC 9 cut(s) 140, 1588, 1670, 1679, 1727, 2044, 2873, 3029, 3315
NarI GGCGCC 1 cut(s) 2757
NdeI CATATG 2 cut(s) 526, 1194
NlaIV GGNNCC 3 cut(s) 100, 2112, 2758
NmeAIII GCCGAG 1 cut(s) 1796
NmuCI GTSAC 3 cut(s) 368, 2373, 2675
NsbI TGCGCA 2 cut(s) 1674, 1976
NsiI ATGCAT 1 cut(s) 719
NspI RCATGY 6 cut(s) 364, 717, 1662, 1715, 2138, 2722
PaeI GCATGC 1 cut(s) 1715
PaeR7I CTCGAG 2 cut(s) 2378, 3059
PaqCI CACCTGC 1 cut(s) 1009
PciI ACATGT 2 cut(s) 360, 2718
PciSI GCTCTTC 1 cut(s) 2238
PctI GAATGC 1 cut(s) 1527
PdmI GAANNNNTTC 2 cut(s) 2969, 3326
Pfl23II CGTACG 1 cut(s) 1706
PflFI GACNNNGTC 1 cut(s) 2179
PflMI CCANNNNNTGG 2 cut(s) 2257, 3303
Ple19I CGATCG 1 cut(s) 34
PleI GAGTC 5 cut(s) 256, 285, 947, 1104, 2822
PluTI GGCGCC 1 cut(s) 2760
PpsI GAGTC 5 cut(s) 256, 285, 947, 1104, 2822
Ppu21I YACGTR 2 cut(s) 992, 1687
PscI ACATGT 2 cut(s) 360, 2718
PshBI ATTAAT 2 cut(s) 533, 2243
Psp124BI GAGCTC 1 cut(s) 3105
Psp6I CCWGG 2 cut(s) 1045, 1664
PspEI GGTNACC 1 cut(s) 1794
PspGI CCWGG 2 cut(s) 1045, 1664
PspLI CGTACG 1 cut(s) 1706
PspN4I GGNNCC 3 cut(s) 100, 2112, 2758
PspPI GGNCC 1 cut(s) 2903
PspXI VCTCGAGB 1 cut(s) 2378
PsrI GAACNNNNNNTAC 2 cut(s) 2415, 2447
PstI CTGCAG 1 cut(s) 666
PsuI RGATCY 5 cut(s) 672, 1363, 2707, 2950, 3039
PsyI GACNNNGTC 1 cut(s) 2179
PvuI CGATCG 1 cut(s) 34
PvuII CAGCTG 2 cut(s) 1562, 2188
RsaI GTAC 7 cut(s) 735, 1570, 1708, 2738, 2889, 3053, 3218
RsaNI GTAC 7 cut(s) 734, 1569, 1707, 2737, 2888, 3052, 3217
RseI CAYNNNNRTG 3 cut(s) 2939, 3110, 3116
SacI GAGCTC 1 cut(s) 3105
SalI GTCGAC 1 cut(s) 1210
SapI GCTCTTC 1 cut(s) 2238
Sau96I GGNCC 1 cut(s) 2903
ScaI AGTACT 1 cut(s) 2889
SchI GAGTC 5 cut(s) 257, 286, 947, 1104, 2822
ScrFI CCNGG 2 cut(s) 1047, 1666
SduI GDGCHC 4 cut(s) 1283, 1310, 3105, 3311
SfaNI GCATC 7 cut(s) 121, 1162, 1547, 2150, 2862, 3072, 3136
SfcI CTRYAG 1 cut(s) 662
SfoI GGCGCC 1 cut(s) 2758
Sfr274I CTCGAG 2 cut(s) 2378, 3059
SlaI CTCGAG 2 cut(s) 2378, 3059
SmiMI CAYNNNNRTG 3 cut(s) 2939, 3110, 3116
SmlI CTYRAG 4 cut(s) 484, 1600, 2378, 3059
SmoI CTYRAG 4 cut(s) 484, 1600, 2378, 3059
SnaBI TACGTA 1 cut(s) 992
SpeI ACTAGT 2 cut(s) 2290, 3007
SphI GCATGC 1 cut(s) 1715
SsiI CCGC 4 cut(s) 37, 2761, 2865, 3133
SspDI GGCGCC 1 cut(s) 2756
SspI AATATT 3 cut(s) 807, 2157, 2451
SstI GAGCTC 1 cut(s) 3105
StyD4I CCNGG 2 cut(s) 1045, 1664
StyI CCWWGG 1 cut(s) 192
TaiI ACGT 2 cut(s) 994, 1689
TatI WGTACW 3 cut(s) 2736, 2887, 3051
TauI GCSGC 2 cut(s) 39, 3136
TscAI CASTG 5 cut(s) 145, 580, 2491, 2592, 3308
TseFI GTSAC 3 cut(s) 368, 2373, 2675
TseI GCWGC 8 cut(s) 16, 521, 664, 1670, 1825, 1913, 2138, 3130
Tsp45I GTSAC 3 cut(s) 368, 2373, 2675
TspGWI ACGGA 2 cut(s) 736, 2304
TspRI CASTG 5 cut(s) 145, 580, 2491, 2592, 3308
Tth111I GACNNNGTC 1 cut(s) 2179
Van91I CCANNNNNTGG 2 cut(s) 2257, 3303
VneI GTGCAC 1 cut(s) 1279
VspI ATTAAT 2 cut(s) 533, 2243
XapI RAATTY 2 cut(s) 2581, 3200
XbaI TCTAGA 1 cut(s) 620
XceI RCATGY 6 cut(s) 364, 717, 1662, 1715, 2138, 2722
XhoI CTCGAG 2 cut(s) 2378, 3059
XmiI GTMKAC 1 cut(s) 1211
XmnI GAANNNNTTC 2 cut(s) 2969, 3326
ZrmI AGTACT 1 cut(s) 2889
Zsp2I ATGCAT 1 cut(s) 719
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.