Rh7BG178000

Plant family of unknown function (DUF810)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
OG0007415
Physical Location & Seq
Reverse (-)
14048634 .. 14061627
12994 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG178000.1

Sequence Viewer

Length: 2928 bp
ATGGAGGAGCAACACTCTCTCTTCCACCGCTACCGCCGCGATCGCCGCAAGCTTCTGGAGTTTCTCTTGTCTTCTTCGGCGTCCTCCTCGTCGCTTTCTCACATCAATTTCGATACTCTCAGTGCCGATTATGTCATCAATCGCGTCAAATCCGGTGGGGTGGTGGATATATCTGAAGCAACCAAGACGTACTTCCATGAATCTTCGTATCCTCCAATGACTCATTCGAAATTAGGGGATTCCTTTCTTCTACATACTGATCCAGATGATTCTGGATCACCTCCTAGGCGTGCGCCTCCATCAGTTCCATCTAGAAAGCCGGGTTCGTTGAAAGTTGAGAACATTGAAAGGAATGGTGACGACCATGGTTTTAAATATAGAGCCTCACCCAGCACACGTCCAAGGCCTATTGAAAACTTTAAAATTGTTTCATTGGGATTGCCTAGTCTGAAAACAGGATTATCTGATGATGACTTGCGGGAGTCAGCATACGAAATATTGCTTGCATCTATGGCAACATCTGGGATTGTAATCTGTTCTGTTGAAGATCAAAGGAAACATAGGCCTTCCAGATTGCTGTCAGGATTAAAGAGTAGAAAGGATAAACCAAATGTGCAGTCACAGCCTCTTGATAAAAACTTACGGCTGATCCGCACCATCCGTGTGCAGATGCAGATTTCTGAAGCAATGGATGAGTGCACTAGACAGAAGATGATGATGTTATCGCCAGGGAGAACGCGGGTGCAGATCGATATTCCTCAAATTGTGTTGGGGCTTTTGAATTTCACTTTTAAGTCTGATTTTTCAAATGAAAAGTCTTATATGCAATGGAAGAATAGACAGGCAAGTATCTTAGAAGAACTTCTCTGCTTTTCTCCTAATCTTGTGGCGCATGATCATCTAACTATTAAGCGTTCTCTTGCTATGATTAGAAATGCAAAGGAGTGGGACTTTATGTCTTCTTCTGGAAAGGCAGAGGTTATATCAGTTATCAAACAGTCAGCTTTAACGCTGTCATCTCTTCCAGGACGCTTTGATCTCCAAAGTGAGACCTATTATTGGACTTCTGCATATCACTTGAATATTAGGCTTTATGAGAAACTACTTCTTGGTGTATTTGATGTTCTTGATGAAAGCCAGCTGATAGAGGAAGCTGATGAGTTGCTGATGCTCTTGAAGTTGACATGGTCTACTTTAGGCATCACTCAAAAAATGCATGATGCAATATATATGTGGGTCCTTTTCCAACAGTTTGTTGGAACAGATGAGGCTCTGCTATTAGAATATGCAACGGTGGAGTTGCAGGAGCTTATATCAGCTAAAGTTGATGATGAGAATGTAAGGCTATATATGAATAGCCTGCTATGTTCAATCCACTGCAACGCCGTCGAGATAAAGTTAAGTTTGGTTGATGCTGTCTTCTACTCTTTAAGCATTTGGTGTGAGAGTAAACTACAAGACTATCATCTGCATTTCAGTCAGCAACACAGTCACTTAAAGAGGGTGATGAGCTTAGTGTCAGCAGTTGGCGTTCTTAATTTCGGTGATAGTGGTCATATGAAGTTGAGGAGGTTCAATCTCAATACGGATGCTGCTAAAATACTTGAGTCATATGTGAAAAGGTCAATTGAAGCTGCATACAGGCGGGTAGCAAGTAACATAGATCACTTATCAGAAGTGGAAAAGAAACATCCTTTGGGTGTGCTTGCAAATGAACTGAGGTTGATTGCTGAGAGAGAACTAAATGTGTTCTACCCGGAACTATGCAAATGGTGCCCTAATTCTGGGATGATTGCAGCTATGATGTTGCACCAGATTTATTGGGAAAGGCTGAAACCCTTTCTGGATGGAGTGTCATCTCTTTCTGAAGATGTTAAAGCCGTGCTTCCAGCTGCTGATTTGTTGGATCAAGTCGTAACTCAGCTTTACAATACTGGTAATGGAGAAAATTGTGAAGATCGGCACCATTATCCGATTGGTGAAGTTGCTAAACCTATCATTCTTGATTGGGTGATTGCTCAGCATGAACGCATCTTGGAATGGACTGGACGTGCTTTTGATCTTGAGAAGTGGGAGCCTTTGTCATCTCAGCAAAGACAGGCAACATCGATAGTTGAAGTGTTTAGAATTATAGAGGAGACTGTGGATCAATTATTTGGTTTCCGTCTCCCTATGGATATCACTCATTTGCAAGCTCTGTTATCTGTTGTCTTTCATACCTTGGATGCCTATTTGCTGAAATTGCTCGACCAGATAGTTGAGAAAAATTACTTATATCCATCAGCTCCTCCATTGACTCGCTACAAGGAGACGACTATTCCGGTGCTGAAAAAGAAGTTTCTTGAGTGTATGCCTTTGGATGACAATGTGTATGACAAGTTGAATACTTTGACAATACCCAAACTCTGTGTCCGAATGAACACGTTGAAATATATTCAGAAACAAATTGACATACTAGAAGATGGTATCAGAAAATCTTGGGCTCTCATCAGACAATCAATTGATAAAACATGTGCCAGAGAACAGCGTTTGGGAACTTCAACATGCAATGAACAAATTGATGAGCTCTTCTGCACCACCTTTGACATCATCAGGGATAATGCAGCAAATGCCATCAGTAAAATTTGTGACTTTACTGGTGCAAAAGCTGTGTTCTGGGATCTCAGACATGCATTCCTCTTTTGTTTATATTGTGGAAGCGTTGAAGCTTCTCGTTTGGATGGTGTTCTCACACGCATTGATACTGTCCTTGGCCATGTATGCAGTTATATTGATGATTCTCTTAGAGACGCTGTGGTTTTAAGCATCTGTCGAGCATCACTGGAAGGCTTTGCGTGGGTTTTGCTTGATGGTGGGCCTTCCCGTGCATTTTGTGATTCAGATATTGTACTAATAGAGGATGACCTTTCTGCACTAAAGGTATGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF810

Protein Analysis

975

Amino Acids

111.18

Weight (kDa)

6.04

Isoelectric Point (pI)

43.32

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TPR_PATROL1 PF25761 666 - 973 6.6e-72 PATROL1-like, TPR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 1773, 1962
AccI GTMKAC 1 cut(s) 1190
AccII CGCG 3 cut(s) 39, 144, 739
AciI CCGC 8 cut(s) 28, 34, 37, 46, 478, 652, 739, 1645
AclWI GGATC 6 cut(s) 254, 283, 643, 1914, 2154, 2667
AcoI YGGCCR 1 cut(s) 2752
AcsI RAATTY 2 cut(s) 781, 2622
AcuI CTGAAG 3 cut(s) 195, 702, 1887
AcyI GRCGYC 1 cut(s) 80
AfaI GTAC 2 cut(s) 191, 2889
AfiI CCNNNNNNNGG 2 cut(s) 1059, 1784
AflIII ACRYGT 3 cut(s) 395, 2421, 2510
AhdI GACNNNNNGTC 1 cut(s) 955
AjiI CACGTC 2 cut(s) 398, 2051
AjnI CCWGG 2 cut(s) 727, 1024
AjuI GAANNNNNNNTTGG 6 cut(s) 176, 208, 208, 240, 1679, 1711
Alw21I GWGCWC 2 cut(s) 701, 2568
Alw26I GTCTC 5 cut(s) 1043, 2132, 2171, 2303, 2781
Alw44I GTGCAC 1 cut(s) 697
AlwI GGATC 6 cut(s) 254, 283, 643, 1914, 2154, 2667
AlwNI CAGNNNCTG 1 cut(s) 1895
AoxI GGCC 4 cut(s) 404, 563, 2752, 2855
ApaLI GTGCAC 1 cut(s) 697
ApeKI GCWGC 5 cut(s) 1592, 1634, 1796, 1892, 2603
ApoI RAATTY 2 cut(s) 781, 2622
ArsI GACNNNNNNTTYG 6 cut(s) 602, 634, 800, 832, 2394, 2426
AsiSI GCGATCGC 1 cut(s) 43
Asp700I GAANNNNTTC 1 cut(s) 861
AspA2I CCTAGG 1 cut(s) 284
AspLEI GCGC 2 cut(s) 295, 892
AspS9I GGNCC 2 cut(s) 1237, 2855
AsuC2I CCSGG 2 cut(s) 321, 1757
AsuHPI GGTGA 7 cut(s) 270, 368, 378, 1516, 1556, 1991, 2023
AsuII TTCGAA 1 cut(s) 227
AvaII GGWCC 1 cut(s) 1237
AvrII CCTAGG 1 cut(s) 284
BaeGI GKGCMC 2 cut(s) 701, 1778
BalI TGGCCA 1 cut(s) 2754
BanI GGYRCC 2 cut(s) 1773, 1962
BanII GRGCYC 2 cut(s) 2485, 2568
BbsI GAAGAC 3 cut(s) 63, 951, 1411
Bbv12I GWGCWC 2 cut(s) 701, 2568
BbvI GCAGC 5 cut(s) 1579, 1621, 1808, 1879, 2615
BccI CCATC 9 cut(s) 307, 316, 665, 1841, 2287, 2456, 2621, 2714, 2843
BceAI ACGGC 3 cut(s) 659, 1370, 1865
BcgI CGANNNNNNTGC 2 cut(s) 1369, 1403
BciT130I CCWGG 2 cut(s) 729, 1026
BciVI GTATCC 1 cut(s) 219
BclI TGATCA 1 cut(s) 895
BcnI CCSGG 2 cut(s) 321, 1757
BcoDI GTCTC 5 cut(s) 1043, 2132, 2171, 2303, 2781
BfaI CTAG 5 cut(s) 285, 312, 444, 702, 2456
BfuI GTATCC 1 cut(s) 219
BisI GCNGC 7 cut(s) 37, 46, 1593, 1635, 1797, 1893, 2604
BlnI CCTAGG 1 cut(s) 284
BlpI GCTNAGC 1 cut(s) 2019
BlsI GCNGC 7 cut(s) 38, 47, 1594, 1636, 1798, 1894, 2605
Bme1390I CCNGG 4 cut(s) 321, 729, 1026, 1757
Bme18I GGWCC 1 cut(s) 1237
BmeRI GACNNNNNGTC 1 cut(s) 955
BmgBI CACGTC 2 cut(s) 398, 2051
BmgT120I GGNCC 2 cut(s) 1237, 2855
BmiI GGNNCC 4 cut(s) 1238, 1775, 1964, 2076
BmrFI CCNGG 4 cut(s) 321, 729, 1026, 1757
BpiI GAAGAC 3 cut(s) 63, 951, 1411
BplI GAGNNNNNCTC 1 cut(s) 31
BpmI CTGGAG 1 cut(s) 77
Bpu1102I GCTNAGC 1 cut(s) 2019
Bpu14I TTCGAA 1 cut(s) 227
BpuEI CTTGAG 3 cut(s) 1625, 2084, 2363
BpuMI CCSGG 2 cut(s) 321, 1757
Bsa29I ATCGAT 2 cut(s) 750, 2108
BsaBI GATNNNNATC 1 cut(s) 530
BsaHI GRCGYC 1 cut(s) 80
BsaI GGTCTC 1 cut(s) 1043
BsaJI CCNNGG 6 cut(s) 284, 364, 401, 728, 2220, 2749
BsaWI WCCGGW 2 cut(s) 152, 2320
BsaXI ACNNNNNCTCC 2 cut(s) 2066, 2096
Bsc4I CCNNNNNNNGG 2 cut(s) 1059, 1784
Bse1I ACTGG 4 cut(s) 1939, 2050, 2641, 2826
Bse3DI GCAATG 3 cut(s) 693, 833, 2554
Bse8I GATNNNNATC 1 cut(s) 530
BseBI CCWGG 2 cut(s) 729, 1026
BseCI ATCGAT 2 cut(s) 750, 2108
BseDI CCNNGG 6 cut(s) 284, 364, 401, 728, 2220, 2749
BseJI GATNNNNATC 1 cut(s) 530
BseLI CCNNNNNNNGG 2 cut(s) 1059, 1784
BseMI GCAATG 3 cut(s) 693, 833, 2554
BseMII CTCAG 7 cut(s) 133, 1709, 1722, 1934, 2033, 2102, 2677
BseNI ACTGG 4 cut(s) 1939, 2050, 2641, 2826
BseRI GAGGAG 5 cut(s) 20, 76, 1582, 2150, 2277
BseSI GKGCMC 2 cut(s) 701, 1778
BseXI GCAGC 5 cut(s) 1579, 1621, 1808, 1879, 2615
BseYI CCCAGC 1 cut(s) 389
BsgI GTGCAG 5 cut(s) 635, 686, 764, 2557, 2895
Bsh1236I CGCG 3 cut(s) 39, 144, 739
Bsh1285I CGRYCG 1 cut(s) 43
BshFI GGCC 4 cut(s) 406, 565, 2754, 2857
BshNI GGYRCC 2 cut(s) 1773, 1962
BshVI ATCGAT 2 cut(s) 750, 2108
BsiEI CGRYCG 1 cut(s) 43
BsiHKAI GWGCWC 2 cut(s) 701, 2568
BsiSI CCGG 4 cut(s) 153, 320, 1757, 2321
BslFI GGGAC 1 cut(s) 962
BslI CCNNNNNNNGG 2 cut(s) 1059, 1784
BsmAI GTCTC 5 cut(s) 1043, 2132, 2171, 2303, 2781
BsmBI CGTCTC 3 cut(s) 2171, 2303, 2781
BsmFI GGGAC 1 cut(s) 962
BsmI GAATGC 1 cut(s) 2672
BsnI GGCC 4 cut(s) 406, 565, 2754, 2857
Bso31I GGTCTC 1 cut(s) 1043
Bsp119I TTCGAA 1 cut(s) 227
Bsp1286I GDGCHC 4 cut(s) 701, 1778, 2485, 2568
Bsp1720I GCTNAGC 1 cut(s) 2019
Bsp19I CCATGG 1 cut(s) 364
BspACI CCGC 8 cut(s) 28, 34, 37, 46, 478, 652, 739, 1645
BspANI GGCC 4 cut(s) 406, 565, 2754, 2857
BspCNI CTCAG 7 cut(s) 132, 1710, 1723, 1933, 2032, 2101, 2676
BspDI ATCGAT 2 cut(s) 750, 2108
BspFNI CGCG 3 cut(s) 39, 144, 739
BspLI GGNNCC 4 cut(s) 1238, 1775, 1964, 2076
BspPI GGATC 6 cut(s) 254, 283, 643, 1914, 2154, 2667
BspQI GCTCTTC 1 cut(s) 2573
BspT104I TTCGAA 1 cut(s) 227
BspT107I GGYRCC 2 cut(s) 1773, 1962
BspTNI GGTCTC 1 cut(s) 1043
BsrDI GCAATG 3 cut(s) 693, 833, 2554
BsrI ACTGG 4 cut(s) 1939, 2050, 2641, 2826
BssECI CCNNGG 6 cut(s) 284, 364, 401, 728, 2220, 2749
BssNI GRCGYC 1 cut(s) 80
BssT1I CCWWGG 5 cut(s) 284, 364, 401, 2220, 2749
Bst2UI CCWGG 2 cut(s) 729, 1026
Bst4CI ACNGT 6 cut(s) 999, 1251, 1294, 1490, 2143, 2746
Bst6I CTCTTC 3 cut(s) 26, 1026, 2573
BstACI GRCGYC 1 cut(s) 80
BstAPI GCANNNNNTGC 2 cut(s) 1773, 2609
BstBI TTCGAA 1 cut(s) 227
BstC8I GCNNGC 7 cut(s) 50, 291, 504, 1139, 1361, 1707, 2193
BstDSI CCRYGG 1 cut(s) 364
BstFNI CGCG 3 cut(s) 39, 144, 739
BstHHI GCGC 2 cut(s) 295, 892
BstMAI GTCTC 5 cut(s) 1043, 2132, 2171, 2303, 2781
BstMCI CGRYCG 1 cut(s) 43
BstMWI GCNNNNNNNGC 9 cut(s) 36, 42, 45, 512, 622, 1773, 2242, 2609, 2760
BstNI CCWGG 2 cut(s) 729, 1026
BstNSI RCATGY 3 cut(s) 2514, 2547, 2672
BstSCI CCNGG 4 cut(s) 319, 727, 1024, 1755
BstSLI GKGCMC 2 cut(s) 701, 1778
BstUI CGCG 3 cut(s) 39, 144, 739
BstV1I GCAGC 5 cut(s) 1579, 1621, 1808, 1879, 2615
BstV2I GAAGAC 3 cut(s) 63, 951, 1411
BstX2I RGATCY 1 cut(s) 2659
BstYI RGATCY 1 cut(s) 2659
Bsu15I ATCGAT 2 cut(s) 750, 2108
BsuI GTATCC 1 cut(s) 219
BsuRI GGCC 4 cut(s) 406, 565, 2754, 2857
BsuTUI ATCGAT 2 cut(s) 750, 2108
BtgI CCRYGG 1 cut(s) 364
BtrI CACGTC 2 cut(s) 398, 2051
BtsI GCAGTG 1 cut(s) 1375
BtsIMutI CAGTG 3 cut(s) 127, 1375, 2819
Cac8I GCNNGC 7 cut(s) 50, 291, 504, 1139, 1361, 1707, 2193
CaiI CAGNNNCTG 1 cut(s) 1895
CfoI GCGC 2 cut(s) 295, 892
Cfr13I GGNCC 2 cut(s) 1237, 2855
ClaI ATCGAT 2 cut(s) 750, 2108
CseI GACGC 4 cut(s) 69, 133, 1038, 2798
Csp6I GTAC 2 cut(s) 190, 2888
CspCI CAANNNNNGTGG 2 cut(s) 136, 171
CviQI GTAC 2 cut(s) 190, 2888
DraI TTTAAA 2 cut(s) 373, 421
DriI GACNNNNNGTC 1 cut(s) 955
EaeI YGGCCR 1 cut(s) 2752
Eam1104I CTCTTC 3 cut(s) 26, 1026, 2573
Eam1105I GACNNNNNGTC 1 cut(s) 955
EarI CTCTTC 3 cut(s) 26, 1026, 2573
Ecl136II GAGCTC 1 cut(s) 2566
Eco130I CCWWGG 5 cut(s) 284, 364, 401, 2220, 2749
Eco147I AGGCCT 2 cut(s) 406, 565
Eco24I GRGCYC 2 cut(s) 2485, 2568
Eco31I GGTCTC 1 cut(s) 1043
Eco32I GATATC 1 cut(s) 2179
Eco47I GGWCC 1 cut(s) 1237
Eco53kI GAGCTC 1 cut(s) 2566
Eco57I CTGAAG 3 cut(s) 195, 702, 1887
EcoICRI GAGCTC 1 cut(s) 2566
EcoO109I RGGNCCY 1 cut(s) 1237
EcoRII CCWGG 2 cut(s) 727, 1024
EcoRV GATATC 1 cut(s) 2179
EcoT14I CCWWGG 5 cut(s) 284, 364, 401, 2220, 2749
EcoT22I ATGCAT 2 cut(s) 1218, 2674
EcoT38I GRGCYC 2 cut(s) 2485, 2568
ErhI CCWWGG 5 cut(s) 284, 364, 401, 2220, 2749
Esp3I CGTCTC 3 cut(s) 2171, 2303, 2781
FalI AAGNNNNNCTT 4 cut(s) 176, 208, 1869, 1901
FaqI GGGAC 1 cut(s) 962
FauI CCCGC 3 cut(s) 471, 732, 1638
FauNDI CATATG 2 cut(s) 1557, 1612
FbaI TGATCA 1 cut(s) 895
FblI GTMKAC 1 cut(s) 1190
Fnu4HI GCNGC 7 cut(s) 37, 46, 1593, 1635, 1797, 1893, 2604
FriOI GRGCYC 2 cut(s) 2485, 2568
Fsp4HI GCNGC 7 cut(s) 37, 46, 1593, 1635, 1797, 1893, 2604
FspBI CTAG 5 cut(s) 285, 312, 444, 702, 2456
GlaI GCGC 2 cut(s) 294, 891
GluI GCNGC 7 cut(s) 37, 46, 1593, 1635, 1797, 1893, 2604
GsaI CCCAGC 1 cut(s) 393
GsuI CTGGAG 1 cut(s) 77
HaeIII GGCC 4 cut(s) 406, 565, 2754, 2857
HapII CCGG 4 cut(s) 153, 320, 1757, 2321
HgaI GACGC 4 cut(s) 69, 133, 1038, 2798
HhaI GCGC 2 cut(s) 295, 892
Hin1I GRCGYC 1 cut(s) 80
Hin6I GCGC 2 cut(s) 293, 890
HinP1I GCGC 2 cut(s) 293, 890
HincII GTYRAC 1 cut(s) 1182
HindII GTYRAC 1 cut(s) 1182
HindIII AAGCTT 2 cut(s) 50, 2706
HinfI GANTC 9 cut(s) 200, 220, 239, 269, 482, 1607, 2296, 2777, 2876
HpaII CCGG 4 cut(s) 153, 320, 1757, 2321
HphI GGTGA 7 cut(s) 270, 368, 378, 1516, 1556, 1991, 2023
Hpy166II GTNNAC 4 cut(s) 699, 1182, 1191, 1451
Hpy8I GTNNAC 4 cut(s) 699, 1182, 1191, 1451
Hpy99I CGWCG 2 cut(s) 94, 1391
HpyAV CCTTC 3 cut(s) 576, 2819, 2868
HpyCH4III ACNGT 6 cut(s) 999, 1251, 1294, 1490, 2143, 2746
HpyCH4IV ACGT 4 cut(s) 188, 397, 2050, 2423
HpyF10VI GCNNNNNNNGC 9 cut(s) 36, 42, 45, 512, 622, 1773, 2242, 2609, 2760
HpySE526I ACGT 4 cut(s) 188, 397, 2050, 2423
Hsp92I GRCGYC 1 cut(s) 80
HspAI GCGC 2 cut(s) 293, 890
Ksp22I TGATCA 1 cut(s) 895
LguI GCTCTTC 1 cut(s) 2573
LmnI GCTCC 4 cut(s) 7, 1306, 2074, 2290
Lsp1109I GCAGC 5 cut(s) 1579, 1621, 1808, 1879, 2615
MaeI CTAG 5 cut(s) 285, 312, 444, 702, 2456
MaeII ACGT 4 cut(s) 188, 397, 2050, 2423
MaeIII GTNAC 6 cut(s) 356, 618, 1490, 1655, 1915, 2627
MfeI CAATTG 2 cut(s) 1626, 2499
MflI RGATCY 1 cut(s) 2659
MhlI GDGCHC 4 cut(s) 701, 1778, 2485, 2568
MlsI TGGCCA 1 cut(s) 2754
MluNI TGGCCA 1 cut(s) 2754
MlyI GAGTC 4 cut(s) 214, 491, 1616, 2290
MmeI TCCRAC 3 cut(s) 1237, 1270, 1884
Mox20I TGGCCA 1 cut(s) 2754
Mph1103I ATGCAT 2 cut(s) 1218, 2674
MroXI GAANNNNTTC 1 cut(s) 861
MscI TGGCCA 1 cut(s) 2754
MslI CAYNNNNRTG 1 cut(s) 662
Msp20I TGGCCA 1 cut(s) 2754
MspA1I CMGCKG 2 cut(s) 1141, 1892
MspI CCGG 4 cut(s) 153, 320, 1757, 2321
MspR9I CCNGG 4 cut(s) 321, 729, 1026, 1757
MunI CAATTG 2 cut(s) 1626, 2499
Mva1269I GAATGC 1 cut(s) 2672
MvaI CCWGG 2 cut(s) 729, 1026
MvnI CGCG 3 cut(s) 39, 144, 739
MwoI GCNNNNNNNGC 9 cut(s) 36, 42, 45, 512, 622, 1773, 2242, 2609, 2760
NciI CCSGG 2 cut(s) 321, 1757
NcoI CCATGG 1 cut(s) 364
NdeI CATATG 2 cut(s) 1557, 1612
NlaIV GGNNCC 4 cut(s) 1238, 1775, 1964, 2076
NmuCI GTSAC 4 cut(s) 356, 618, 1490, 2627
NsiI ATGCAT 2 cut(s) 1218, 2674
NspI RCATGY 3 cut(s) 2514, 2547, 2672
NspV TTCGAA 1 cut(s) 227
PceI AGGCCT 2 cut(s) 406, 565
PciI ACATGT 1 cut(s) 2510
PciSI GCTCTTC 1 cut(s) 2573
PctI GAATGC 1 cut(s) 2672
PdmI GAANNNNTTC 1 cut(s) 861
PfeI GAWTC 5 cut(s) 200, 239, 269, 2777, 2876
PflFI GACNNNGTC 1 cut(s) 1186
PfoI TCCNGGA 1 cut(s) 1024
PkrI GCNGC 7 cut(s) 38, 47, 1594, 1636, 1798, 1894, 2605
Ple19I CGATCG 1 cut(s) 43
PleI GAGTC 4 cut(s) 214, 490, 1615, 2290
PpsI GAGTC 4 cut(s) 214, 490, 1615, 2290
PpuMI RGGWCCY 1 cut(s) 1237
PscI ACATGT 1 cut(s) 2510
Psp124BI GAGCTC 1 cut(s) 2568
Psp5II RGGWCCY 1 cut(s) 1237
Psp6I CCWGG 2 cut(s) 727, 1024
PspFI CCCAGC 1 cut(s) 389
PspGI CCWGG 2 cut(s) 727, 1024
PspN4I GGNNCC 4 cut(s) 1238, 1775, 1964, 2076
PspPI GGNCC 2 cut(s) 1237, 2855
PspPPI RGGWCCY 1 cut(s) 1237
PsrI GAACNNNNNNTAC 2 cut(s) 1107, 1139
PstNI CAGNNNCTG 1 cut(s) 1895
PsuI RGATCY 1 cut(s) 2659
PsyI GACNNNGTC 1 cut(s) 1186
PvuI CGATCG 1 cut(s) 43
PvuII CAGCTG 2 cut(s) 1141, 1892
RgaI GCGATCGC 1 cut(s) 43
RsaI GTAC 2 cut(s) 191, 2889
RsaNI GTAC 2 cut(s) 190, 2888
RseI CAYNNNNRTG 1 cut(s) 662
SacI GAGCTC 1 cut(s) 2568
SapI GCTCTTC 1 cut(s) 2573
SatI GCNGC 7 cut(s) 37, 46, 1593, 1635, 1797, 1893, 2604
Sau96I GGNCC 2 cut(s) 1237, 2855
SchI GAGTC 4 cut(s) 214, 491, 1616, 2290
ScrFI CCNGG 4 cut(s) 321, 729, 1026, 1757
SduI GDGCHC 4 cut(s) 701, 1778, 2485, 2568
SfaAI GCGATCGC 1 cut(s) 43
SfuI TTCGAA 1 cut(s) 227
SgfI GCGATCGC 1 cut(s) 43
SinI GGWCC 1 cut(s) 1237
SmiMI CAYNNNNRTG 1 cut(s) 662
SmlI CTYRAG 3 cut(s) 1604, 2063, 2342
SmoI CTYRAG 3 cut(s) 1604, 2063, 2342
SseBI AGGCCT 2 cut(s) 406, 565
SsiI CCGC 8 cut(s) 28, 34, 37, 46, 478, 652, 739, 1645
SspI AATATT 2 cut(s) 498, 1084
SspMI CTAG 5 cut(s) 285, 312, 444, 702, 2456
SstI GAGCTC 1 cut(s) 2568
StuI AGGCCT 2 cut(s) 406, 565
StyD4I CCNGG 4 cut(s) 319, 727, 1024, 1755
StyI CCWWGG 5 cut(s) 284, 364, 401, 2220, 2749
TaaI ACNGT 6 cut(s) 999, 1251, 1294, 1490, 2143, 2746
TaiI ACGT 4 cut(s) 191, 400, 2053, 2426
TaqI TCGA 7 cut(s) 111, 227, 750, 1389, 2108, 2247, 2812
TatI WGTACW 1 cut(s) 2887
TauI GCSGC 2 cut(s) 39, 48
TfiI GAWTC 5 cut(s) 200, 239, 269, 2777, 2876
TscAI CASTG 3 cut(s) 127, 1382, 2826
TseFI GTSAC 4 cut(s) 356, 618, 1490, 2627
TseI GCWGC 5 cut(s) 1592, 1634, 1796, 1892, 2603
Tsp45I GTSAC 4 cut(s) 356, 618, 1490, 2627
TspGWI ACGGA 3 cut(s) 650, 1601, 2153
TspRI CASTG 3 cut(s) 127, 1382, 2826
Tth111I GACNNNGTC 1 cut(s) 1186
VneI GTGCAC 1 cut(s) 697
VpaK11BI GGWCC 1 cut(s) 1237
XapI RAATTY 2 cut(s) 781, 2622
XbaI TCTAGA 1 cut(s) 311
XceI RCATGY 3 cut(s) 2514, 2547, 2672
XcmI CCANNNNNNNNNTGG 2 cut(s) 1253, 1973
XmaJI CCTAGG 1 cut(s) 284
XmiI GTMKAC 1 cut(s) 1190
XmnI GAANNNNTTC 1 cut(s) 861
XspI CTAG 5 cut(s) 285, 312, 444, 702, 2456
Zsp2I ATGCAT 2 cut(s) 1218, 2674
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.