RH7CG184000

Plant family of unknown function (DUF810)

Design Primers CRISPR Design

Basic Information

Type: Sequence Only
Biological Identity
rosa_samantha
Unknown
OG0007415
Physical Location & Seq
Reverse (-)
0 .. 0
1 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG184000.1

Sequence Viewer

Length: 3423 bp
ATGGAGGAGCAACACTCTCTCTTCCACCGCTACCGCCGCGATCGCCGCAAGCTTCTGGAGTTTCTCTTGTCTTCTTCGGCGTCCTCCTCGTCGCTTTCTCACATCAATTTCGATACTCTCAGCGCCGATTATGTCATCGACCGCGTCAAATCCGGTGGGGTGGTGGATATATCTGAAGCAACCAAGACTTACTTCCATGAATCTTCGTATCCTCCAATGACTCATTCGAAATTAGGGGATTCCTTTCTTCTACATACTGATCCAGATGATTCTGGATCACCTCCTAGGCGTGTGCCTCCATCAGTTCCATCTAGAAAGCCGGGTTCGTTGAAAGTTGAGAACATTGACAGGAATGGTGACGACCATGGTTTTAAATATAGAGCCTCACCCAGCACACGTCCAAGGCCTATTGAAAACTTTAAAATTGTTTCATTGGGATTGCCTAGTCTGAAAACAGGATTATCTGATGATGACTTGCGGGAATCAGCATACGAAATATTGCTTGCATCTATGGCAACATCTGGGATTGTAATCTGTTCTGTTGAAGATCAAAGGAAACATAGGCCTTCCAGATTGCTGTCAGGATTAAAGAGTAGAAAGGATAAACCAAATGTGCAGTCGCAGCCTCTTGATAAAAACTTACGGCTGATCCGCACCATCCGTGTGCAGATGCAGATTTCTGAAGCAAAGGATGAGTGCACTAGACAGAAGATGATGATGTTATCGCCAGGGAGAACGCGGGTGCAGATCGATATTCCTCAAATTGTGTTGGGGCTTTTGAATTTCACTTCTAAGTCTGATTTTTCAAATGAAAAGTCTTATATGCAATGGAAGAATAGACAGGCAAGTATCTTAGAAGAACTTCTCTGCTTTTCTCCTAATCTTGTGGCGCATGATCATCTAACTATTAAGCGTTCTCTTGCTATGATTAGAAATGCAAAGGAGTGGGACTTTATGTCTTCTTCTGGAAAGGCAGAGGTTATATCAGTTATCAAACAGGCAGCTTTAACGCTGTCATCTCTTCCAGGACGCTTTGATCTCCAAAGTGAGACCTATTATTGGACTTCTGCATATCACTTGAATATTAGGCTTTATGAGAAACTACTTCTTGGTGTATTTGATGTTCTTGATGAAAGCCAGCTGATAGAGGAAGCTGATGAGTTCCTGATGCTCTTGAAATTGACATGGTCTACTTTAGGCATCACTCAAAAAATGCATGATGCAATATATATGTGGGTCCTTTTCCAACAGTTTGTTGGAACAGATGAGGCTCTGCTATTAGAATATGCAACGGTGGAGTTGCAGGAGCTTATATCAGCTAAAGTTGATGATGAGAATGTAAGGCTATATATGAATAGCCTGCTATGTTCAATCCACTGCAACGCTGTCGAGATAAAGTTAAGTTTGGTTGATGCTGTCTTCTACTCTTTAAGCATTTGGTGTGAGAGTAAACTACAAGACTATCATCTGCATTTCAGTCAGCAACACAGTCACTTAAAGAGGGTGATGAGCTTAGTGTCAGCAGTTGGCGTTCTTAATTTCGGTGATAGTGGTCATATGAAGTTGAGGAGGTTCAATCTCAATACGGATGCTGCTAAAATACTTGAGTCGTATGTGAAAAGGTCAATTGAAGCTGCATACAGGCGGGTAGCAAGTAACATAGATCACTTATCAGAAGTGGAAAAGAAACATCCTTTGGGCATGCTTGCAAATGAACTGAGGTTGATTGCTGAGAGAGAACTAAATGTGTTCTACCCGGAACTATGCAAATGGTGCCCTAATTCTGGGATGATTGCAGCTATGATGTTGCACCAGATTTATTGGGAAAGGCTGAGACCCTTTCTGGATGGAGTGTCATCTCTTTCTGAAGATGTTAAAGCCGTGCTTCCAGCTGCTGATTTGTTGGATCAAGTCGTAACTCAGCTTTACAATACTGGTAATGGAGAAAATTGTGAAGATCTGCACCATTATCCGATTGGTGAAGTTGCTAAACCTATCATTCTTGATTGGGTGATTGCTCAGCATGAACGCATCTTGGAATGGACTGGACGTGCTTTTGATCTTGAGAAGTGGGAGCCTTTGTCATCTCAGCAAAGACAGGCAGCATCGATAGTTGAAGTGTTTAGAATTATAGAGGAGACTGTGGATCAATTATTTGGTTTCCGTCTCCCTATGGATATCACTCATTTGCAAGCTCTGTTATCTGTTGTCTTTCATACCTTGGATGCCTATTTGCTGAAATTGCTCGACCAGATAGTTGAGAAAAATTACTTATATCCATCAGCTCCTCCATTGACTCGCTACAAGGAGACGACTATTCCGGTGCTGAAAAAGAAGTTTCTTGAGTGTATGCCTTTGGATGACAATGTGTATGACAAGTTGAATACTTTGACAATACGCAAACTCTGTGTCCGAATGAACACGTTGAAATATATTCAGAAACAAATTGACATACTAGAAGATGGTATCAGAAAATCTTGGGCTCTCATCAGACAATCAATTGATAAAACATGTGCCAGAGAACAGCGTTTGGGAACTTCAACATGCAATGAACAAATTGATGAGCTCTTCTGCACCACCTTTGACATCATCAGGGATAATGCAGCAAATGCCATCAGTAAAATTTGTGACTTTACTGGTGCAAAAGCTGTGTTCTGGGATCTCAGACATGCATTCCTCTTTTGTTTATATTGTGGAAGCGTTGAAGCTTCTCGTTTGGATGGTGTTCTCACACGCATTGATACTGTCCTTGGCCATGTATGCAGTTATATTGATGATTCTCTTAGAGACGCTGTGATTTTAAGCATCTGTCGAGCATCACTGGAAGGCTTTGCGTGGGTTTTGCTTGATGGTGGGCCTTCCCGTGCATTTTGTGATTCAGATATTGTACTAATAGAGGATGACCTTTCTGCACTAAAGGAATTTTTTGTAGCTGATGGTGAAGGCCTTCCCCGATCAGTAGTGGAGCAAGAAGCAAAGTTTCTTGAGGAAATACTGAACTTGTATTCACTGCAGACTGAAACTATCATCCAAAAGCTGATGGCTGCAAGTGAACAAATATCATTGGGGCTAGATTCACATGATCATAACTATATGCGATTAAATAATGCCCACACTTTTGTGCGGGTGTTATGCCACAAGAAAGATAGAGAAGCCTCTAAATTCTTGAAAAGGCAATATCAGCTCCCCATGTCTTCAGAATATGAAGACACTCCATCAACAGATCCAACTTCCCAATCACCTCTCAGACCTCTCAGATCAGATCTATCAAAGCGAAGCATGTCAGATCTAGCAAAGCGAAGCACTTCAGATCTAGCAAAGCGAAGCACGTCATTTCGTTGGAATAATACGCATAGTACCTTTACCTCATTTAAGAAGAAACTTCAAGAAGCAACATCTGAATTCAGGAATGTGGCGTGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF810

Protein Analysis

1140

Amino Acids

130.21

Weight (kDa)

6.25

Isoelectric Point (pI)

48.17

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TPR_PATROL1 PF25761 666 - 1065 8.8e-102 PATROL1-like, TPR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1773
AccI GTMKAC 1 cut(s) 1190
AccII CGCG 3 cut(s) 39, 144, 739
AclWI GGATC 7 cut(s) 254, 283, 643, 1914, 2154, 2667, 3218
AcoI YGGCCR 1 cut(s) 2752
AcsI RAATTY 5 cut(s) 781, 2622, 2921, 3161, 3401
AcuI CTGAAG 5 cut(s) 195, 702, 1887, 3180, 3291
AcyI GRCGYC 1 cut(s) 80
AfaI GTAC 2 cut(s) 2889, 3358
AfiI CCNNNNNNNGG 2 cut(s) 1059, 1784
AflIII ACRYGT 3 cut(s) 395, 2421, 2510
AhdI GACNNNNNGTC 1 cut(s) 955
AjiI CACGTC 3 cut(s) 398, 2051, 3330
AjnI CCWGG 2 cut(s) 727, 1024
AjuI GAANNNNNNNTTGG 6 cut(s) 176, 208, 208, 240, 1679, 1711
AleI CACNNNNGTG 1 cut(s) 3119
Alw21I GWGCWC 2 cut(s) 701, 2568
Alw26I GTCTC 6 cut(s) 1043, 1828, 2132, 2171, 2303, 2781
Alw44I GTGCAC 1 cut(s) 697
AlwI GGATC 7 cut(s) 254, 283, 643, 1914, 2154, 2667, 3218
AlwNI CAGNNNCTG 1 cut(s) 1895
AoxI GGCC 5 cut(s) 404, 563, 2752, 2855, 2944
ApaLI GTGCAC 1 cut(s) 697
ApeKI GCWGC 9 cut(s) 622, 1001, 1592, 1634, 1796, 1892, 2102, 2603, 3044
ApoI RAATTY 5 cut(s) 781, 2622, 2921, 3161, 3401
ArsI GACNNNNNNTTYG 6 cut(s) 602, 634, 800, 832, 2394, 2426
AsiSI GCGATCGC 1 cut(s) 43
Asp700I GAANNNNTTC 3 cut(s) 861, 2946, 3304
AspA2I CCTAGG 1 cut(s) 284
AspLEI GCGC 2 cut(s) 125, 892
AspS9I GGNCC 2 cut(s) 1237, 2855
AsuC2I CCSGG 2 cut(s) 321, 1757
AsuHPI GGTGA 9 cut(s) 270, 368, 378, 1516, 1556, 1991, 2023, 2951, 3231
AsuII TTCGAA 1 cut(s) 227
AvaII GGWCC 1 cut(s) 1237
AvrII CCTAGG 1 cut(s) 284
BaeGI GKGCMC 2 cut(s) 701, 1778
BalI TGGCCA 1 cut(s) 2754
BanI GGYRCC 1 cut(s) 1773
BanII GRGCYC 2 cut(s) 2485, 2568
BbsI GAAGAC 5 cut(s) 63, 951, 1411, 3186, 3213
Bbv12I GWGCWC 2 cut(s) 701, 2568
BbvI GCAGC 9 cut(s) 634, 1013, 1579, 1621, 1808, 1879, 2114, 2615, 3031
BceAI ACGGC 2 cut(s) 659, 1865
BcgI CGANNNNNNTGC 2 cut(s) 1369, 1403
BciT130I CCWGG 2 cut(s) 729, 1026
BciVI GTATCC 1 cut(s) 219
BclI TGATCA 2 cut(s) 895, 3082
BcnI CCSGG 2 cut(s) 321, 1757
BcoDI GTCTC 6 cut(s) 1043, 1828, 2132, 2171, 2303, 2781
BfaI CTAG 8 cut(s) 285, 312, 444, 702, 2456, 3071, 3290, 3314
BfmI CTRYAG 1 cut(s) 3011
BfoI RGCGCY 1 cut(s) 126
BfuI GTATCC 1 cut(s) 219
BglII AGATCT 4 cut(s) 1957, 3262, 3286, 3310
BlnI CCTAGG 1 cut(s) 284
BlpI GCTNAGC 1 cut(s) 2019
Bme1390I CCNGG 4 cut(s) 321, 729, 1026, 1757
Bme18I GGWCC 1 cut(s) 1237
BmeRI GACNNNNNGTC 1 cut(s) 955
BmgBI CACGTC 3 cut(s) 398, 2051, 3330
BmgT120I GGNCC 2 cut(s) 1237, 2855
BmiI GGNNCC 3 cut(s) 1238, 1775, 2076
BmrFI CCNGG 4 cut(s) 321, 729, 1026, 1757
BpiI GAAGAC 5 cut(s) 63, 951, 1411, 3186, 3213
BplI GAGNNNNNCTC 1 cut(s) 31
BpmI CTGGAG 1 cut(s) 77
Bpu1102I GCTNAGC 1 cut(s) 2019
Bpu14I TTCGAA 1 cut(s) 227
BpuEI CTTGAG 4 cut(s) 1625, 2084, 2363, 3005
BpuMI CCSGG 2 cut(s) 321, 1757
Bsa29I ATCGAT 2 cut(s) 750, 2108
BsaBI GATNNNNATC 1 cut(s) 530
BsaHI GRCGYC 1 cut(s) 80
BsaI GGTCTC 2 cut(s) 1043, 1828
BsaJI CCNNGG 6 cut(s) 284, 364, 401, 728, 2220, 2749
BsaWI WCCGGW 2 cut(s) 152, 2320
BsaXI ACNNNNNCTCC 2 cut(s) 2066, 2096
Bsc4I CCNNNNNNNGG 2 cut(s) 1059, 1784
Bse1I ACTGG 4 cut(s) 1939, 2050, 2641, 2826
Bse3DI GCAATG 2 cut(s) 833, 2554
Bse8I GATNNNNATC 1 cut(s) 530
BseBI CCWGG 2 cut(s) 729, 1026
BseCI ATCGAT 2 cut(s) 750, 2108
BseDI CCNNGG 6 cut(s) 284, 364, 401, 728, 2220, 2749
BseJI GATNNNNATC 1 cut(s) 530
BseLI CCNNNNNNNGG 2 cut(s) 1059, 1784
BseMI GCAATG 2 cut(s) 833, 2554
BseNI ACTGG 4 cut(s) 1939, 2050, 2641, 2826
BseRI GAGGAG 5 cut(s) 20, 76, 1582, 2150, 2277
BseSI GKGCMC 2 cut(s) 701, 1778
BseXI GCAGC 9 cut(s) 634, 1013, 1579, 1621, 1808, 1879, 2114, 2615, 3031
BseYI CCCAGC 1 cut(s) 389
BsgI GTGCAG 6 cut(s) 635, 686, 764, 1946, 2557, 2895
Bsh1236I CGCG 3 cut(s) 39, 144, 739
Bsh1285I CGRYCG 2 cut(s) 43, 142
BshFI GGCC 5 cut(s) 406, 565, 2754, 2857, 2946
BshNI GGYRCC 1 cut(s) 1773
BshVI ATCGAT 2 cut(s) 750, 2108
BsiEI CGRYCG 2 cut(s) 43, 142
BsiHKAI GWGCWC 2 cut(s) 701, 2568
BsiSI CCGG 4 cut(s) 153, 320, 1757, 2321
BslFI GGGAC 1 cut(s) 962
BslI CCNNNNNNNGG 2 cut(s) 1059, 1784
BsmAI GTCTC 6 cut(s) 1043, 1828, 2132, 2171, 2303, 2781
BsmBI CGTCTC 3 cut(s) 2171, 2303, 2781
BsmFI GGGAC 1 cut(s) 962
BsmI GAATGC 1 cut(s) 2672
BsnI GGCC 5 cut(s) 406, 565, 2754, 2857, 2946
Bso31I GGTCTC 2 cut(s) 1043, 1828
Bsp119I TTCGAA 1 cut(s) 227
Bsp1286I GDGCHC 4 cut(s) 701, 1778, 2485, 2568
Bsp1720I GCTNAGC 1 cut(s) 2019
Bsp19I CCATGG 1 cut(s) 364
BspANI GGCC 5 cut(s) 406, 565, 2754, 2857, 2946
BspDI ATCGAT 2 cut(s) 750, 2108
BspFNI CGCG 3 cut(s) 39, 144, 739
BspLI GGNNCC 3 cut(s) 1238, 1775, 2076
BspMAI CTGCAG 1 cut(s) 3015
BspPI GGATC 7 cut(s) 254, 283, 643, 1914, 2154, 2667, 3218
BspQI GCTCTTC 1 cut(s) 2573
BspT104I TTCGAA 1 cut(s) 227
BspT107I GGYRCC 1 cut(s) 1773
BspTNI GGTCTC 2 cut(s) 1043, 1828
BsrDI GCAATG 2 cut(s) 833, 2554
BsrI ACTGG 4 cut(s) 1939, 2050, 2641, 2826
BssECI CCNNGG 6 cut(s) 284, 364, 401, 728, 2220, 2749
BssNI GRCGYC 1 cut(s) 80
BssT1I CCWWGG 5 cut(s) 284, 364, 401, 2220, 2749
Bst2UI CCWGG 2 cut(s) 729, 1026
Bst4CI ACNGT 5 cut(s) 1251, 1294, 1490, 2143, 2746
Bst6I CTCTTC 3 cut(s) 26, 1026, 2573
BstACI GRCGYC 1 cut(s) 80
BstAPI GCANNNNNTGC 2 cut(s) 1773, 2609
BstBI TTCGAA 1 cut(s) 227
BstC8I GCNNGC 7 cut(s) 50, 504, 1139, 1361, 1703, 1707, 2193
BstDSI CCRYGG 1 cut(s) 364
BstFNI CGCG 3 cut(s) 39, 144, 739
BstH2I RGCGCY 1 cut(s) 126
BstHHI GCGC 2 cut(s) 125, 892
BstMAI GTCTC 6 cut(s) 1043, 1828, 2132, 2171, 2303, 2781
BstMCI CGRYCG 2 cut(s) 43, 142
BstNI CCWGG 2 cut(s) 729, 1026
BstNSI RCATGY 5 cut(s) 1705, 2514, 2547, 2672, 3283
BstSCI CCNGG 4 cut(s) 319, 727, 1024, 1755
BstSFI CTRYAG 1 cut(s) 3011
BstSLI GKGCMC 2 cut(s) 701, 1778
BstUI CGCG 3 cut(s) 39, 144, 739
BstV1I GCAGC 9 cut(s) 634, 1013, 1579, 1621, 1808, 1879, 2114, 2615, 3031
BstV2I GAAGAC 5 cut(s) 63, 951, 1411, 3186, 3213
BstX2I RGATCY 6 cut(s) 1957, 2659, 3223, 3262, 3286, 3310
BstYI RGATCY 6 cut(s) 1957, 2659, 3223, 3262, 3286, 3310
Bsu15I ATCGAT 2 cut(s) 750, 2108
BsuI GTATCC 1 cut(s) 219
BsuRI GGCC 5 cut(s) 406, 565, 2754, 2857, 2946
BsuTUI ATCGAT 2 cut(s) 750, 2108
BtgI CCRYGG 1 cut(s) 364
BtrI CACGTC 3 cut(s) 398, 2051, 3330
BtsI GCAGTG 2 cut(s) 1375, 3008
BtsIMutI CAGTG 3 cut(s) 1375, 2819, 3008
Cac8I GCNNGC 7 cut(s) 50, 504, 1139, 1361, 1703, 1707, 2193
CaiI CAGNNNCTG 1 cut(s) 1895
CfoI GCGC 2 cut(s) 125, 892
Cfr13I GGNCC 2 cut(s) 1237, 2855
ClaI ATCGAT 2 cut(s) 750, 2108
CseI GACGC 4 cut(s) 69, 133, 1038, 2798
Csp6I GTAC 2 cut(s) 2888, 3357
CspCI CAANNNNNGTGG 2 cut(s) 136, 171
CviQI GTAC 2 cut(s) 2888, 3357
DraI TTTAAA 2 cut(s) 373, 421
DriI GACNNNNNGTC 1 cut(s) 955
EaeI YGGCCR 1 cut(s) 2752
Eam1104I CTCTTC 3 cut(s) 26, 1026, 2573
Eam1105I GACNNNNNGTC 1 cut(s) 955
EarI CTCTTC 3 cut(s) 26, 1026, 2573
Ecl136II GAGCTC 1 cut(s) 2566
Eco130I CCWWGG 5 cut(s) 284, 364, 401, 2220, 2749
Eco147I AGGCCT 3 cut(s) 406, 565, 2946
Eco24I GRGCYC 2 cut(s) 2485, 2568
Eco31I GGTCTC 2 cut(s) 1043, 1828
Eco32I GATATC 1 cut(s) 2179
Eco47I GGWCC 1 cut(s) 1237
Eco53kI GAGCTC 1 cut(s) 2566
Eco57I CTGAAG 5 cut(s) 195, 702, 1887, 3180, 3291
EcoICRI GAGCTC 1 cut(s) 2566
EcoO109I RGGNCCY 1 cut(s) 1237
EcoRI GAATTC 1 cut(s) 3401
EcoRII CCWGG 2 cut(s) 727, 1024
EcoRV GATATC 1 cut(s) 2179
EcoT14I CCWWGG 5 cut(s) 284, 364, 401, 2220, 2749
EcoT22I ATGCAT 2 cut(s) 1218, 2674
EcoT38I GRGCYC 2 cut(s) 2485, 2568
ErhI CCWWGG 5 cut(s) 284, 364, 401, 2220, 2749
Esp3I CGTCTC 3 cut(s) 2171, 2303, 2781
FalI AAGNNNNNCTT 4 cut(s) 176, 208, 1869, 1901
FaqI GGGAC 1 cut(s) 962
FauI CCCGC 4 cut(s) 471, 732, 1638, 3117
FauNDI CATATG 1 cut(s) 1557
FbaI TGATCA 2 cut(s) 895, 3082
FblI GTMKAC 1 cut(s) 1190
FriOI GRGCYC 2 cut(s) 2485, 2568
FspBI CTAG 8 cut(s) 285, 312, 444, 702, 2456, 3071, 3290, 3314
GlaI GCGC 2 cut(s) 124, 891
GsaI CCCAGC 1 cut(s) 393
GsuI CTGGAG 1 cut(s) 77
HaeII RGCGCY 1 cut(s) 126
HaeIII GGCC 5 cut(s) 406, 565, 2754, 2857, 2946
HapII CCGG 4 cut(s) 153, 320, 1757, 2321
HgaI GACGC 4 cut(s) 69, 133, 1038, 2798
HhaI GCGC 2 cut(s) 125, 892
Hin1I GRCGYC 1 cut(s) 80
Hin6I GCGC 2 cut(s) 123, 890
HinP1I GCGC 2 cut(s) 123, 890
HindIII AAGCTT 2 cut(s) 50, 2706
HpaII CCGG 4 cut(s) 153, 320, 1757, 2321
HphI GGTGA 9 cut(s) 270, 368, 378, 1516, 1556, 1991, 2023, 2951, 3231
Hpy166II GTNNAC 4 cut(s) 699, 1191, 1451, 3053
Hpy8I GTNNAC 4 cut(s) 699, 1191, 1451, 3053
Hpy99I CGWCG 1 cut(s) 94
HpyAV CCTTC 5 cut(s) 576, 2819, 2868, 2936, 2957
HpyCH4III ACNGT 5 cut(s) 1251, 1294, 1490, 2143, 2746
HpyCH4IV ACGT 4 cut(s) 397, 2050, 2423, 3329
HpySE526I ACGT 4 cut(s) 397, 2050, 2423, 3329
Hsp92I GRCGYC 1 cut(s) 80
HspAI GCGC 2 cut(s) 123, 890
Ksp22I TGATCA 2 cut(s) 895, 3082
LguI GCTCTTC 1 cut(s) 2573
LmnI GCTCC 6 cut(s) 7, 1306, 2074, 2290, 2965, 3189
Lsp1109I GCAGC 9 cut(s) 634, 1013, 1579, 1621, 1808, 1879, 2114, 2615, 3031
MaeI CTAG 8 cut(s) 285, 312, 444, 702, 2456, 3071, 3290, 3314
MaeII ACGT 4 cut(s) 397, 2050, 2423, 3329
MaeIII GTNAC 5 cut(s) 356, 1490, 1655, 1915, 2627
MfeI CAATTG 2 cut(s) 1626, 2499
MflI RGATCY 6 cut(s) 1957, 2659, 3223, 3262, 3286, 3310
MhlI GDGCHC 4 cut(s) 701, 1778, 2485, 2568
MlsI TGGCCA 1 cut(s) 2754
MluNI TGGCCA 1 cut(s) 2754
MlyI GAGTC 3 cut(s) 214, 1616, 2290
MmeI TCCRAC 5 cut(s) 1237, 1270, 1884, 3251, 3320
Mox20I TGGCCA 1 cut(s) 2754
Mph1103I ATGCAT 2 cut(s) 1218, 2674
MroXI GAANNNNTTC 3 cut(s) 861, 2946, 3304
MscI TGGCCA 1 cut(s) 2754
MslI CAYNNNNRTG 2 cut(s) 662, 3119
Msp20I TGGCCA 1 cut(s) 2754
MspA1I CMGCKG 2 cut(s) 1141, 1892
MspI CCGG 4 cut(s) 153, 320, 1757, 2321
MspR9I CCNGG 4 cut(s) 321, 729, 1026, 1757
MunI CAATTG 2 cut(s) 1626, 2499
Mva1269I GAATGC 1 cut(s) 2672
MvaI CCWGG 2 cut(s) 729, 1026
MvnI CGCG 3 cut(s) 39, 144, 739
NciI CCSGG 2 cut(s) 321, 1757
NcoI CCATGG 1 cut(s) 364
NdeI CATATG 1 cut(s) 1557
NlaIV GGNNCC 3 cut(s) 1238, 1775, 2076
NmuCI GTSAC 3 cut(s) 356, 1490, 2627
NsiI ATGCAT 2 cut(s) 1218, 2674
NspI RCATGY 5 cut(s) 1705, 2514, 2547, 2672, 3283
NspV TTCGAA 1 cut(s) 227
OliI CACNNNNGTG 1 cut(s) 3119
PaeI GCATGC 1 cut(s) 1705
PceI AGGCCT 3 cut(s) 406, 565, 2946
PciI ACATGT 1 cut(s) 2510
PciSI GCTCTTC 1 cut(s) 2573
PctI GAATGC 1 cut(s) 2672
PdmI GAANNNNTTC 3 cut(s) 861, 2946, 3304
PfeI GAWTC 7 cut(s) 200, 239, 269, 482, 2777, 2876, 3074
PflFI GACNNNGTC 2 cut(s) 143, 1186
PfoI TCCNGGA 1 cut(s) 1024
Ple19I CGATCG 1 cut(s) 43
PleI GAGTC 3 cut(s) 214, 1615, 2290
PpsI GAGTC 3 cut(s) 214, 1615, 2290
PpuMI RGGWCCY 1 cut(s) 1237
PscI ACATGT 1 cut(s) 2510
Psp124BI GAGCTC 1 cut(s) 2568
Psp5II RGGWCCY 1 cut(s) 1237
Psp6I CCWGG 2 cut(s) 727, 1024
PspFI CCCAGC 1 cut(s) 389
PspGI CCWGG 2 cut(s) 727, 1024
PspN4I GGNNCC 3 cut(s) 1238, 1775, 2076
PspPI GGNCC 2 cut(s) 1237, 2855
PspPPI RGGWCCY 1 cut(s) 1237
PsrI GAACNNNNNNTAC 2 cut(s) 1107, 1139
PstI CTGCAG 1 cut(s) 3015
PstNI CAGNNNCTG 1 cut(s) 1895
PsuI RGATCY 6 cut(s) 1957, 2659, 3223, 3262, 3286, 3310
PsyI GACNNNGTC 2 cut(s) 143, 1186
PvuI CGATCG 1 cut(s) 43
PvuII CAGCTG 2 cut(s) 1141, 1892
RgaI GCGATCGC 1 cut(s) 43
RsaI GTAC 2 cut(s) 2889, 3358
RsaNI GTAC 2 cut(s) 2888, 3357
RseI CAYNNNNRTG 2 cut(s) 662, 3119
SacI GAGCTC 1 cut(s) 2568
SapI GCTCTTC 1 cut(s) 2573
Sau96I GGNCC 2 cut(s) 1237, 2855
SchI GAGTC 3 cut(s) 214, 1616, 2290
ScrFI CCNGG 4 cut(s) 321, 729, 1026, 1757
SduI GDGCHC 4 cut(s) 701, 1778, 2485, 2568
SfaAI GCGATCGC 1 cut(s) 43
SfcI CTRYAG 1 cut(s) 3011
SfuI TTCGAA 1 cut(s) 227
SgfI GCGATCGC 1 cut(s) 43
SinI GGWCC 1 cut(s) 1237
SmiMI CAYNNNNRTG 2 cut(s) 662, 3119
SmlI CTYRAG 4 cut(s) 1604, 2063, 2342, 2984
SmoI CTYRAG 4 cut(s) 1604, 2063, 2342, 2984
SphI GCATGC 1 cut(s) 1705
SseBI AGGCCT 3 cut(s) 406, 565, 2946
SspI AATATT 2 cut(s) 498, 1084
SspMI CTAG 8 cut(s) 285, 312, 444, 702, 2456, 3071, 3290, 3314
SstI GAGCTC 1 cut(s) 2568
StuI AGGCCT 3 cut(s) 406, 565, 2946
StyD4I CCNGG 4 cut(s) 319, 727, 1024, 1755
StyI CCWWGG 5 cut(s) 284, 364, 401, 2220, 2749
TaaI ACNGT 5 cut(s) 1251, 1294, 1490, 2143, 2746
TaiI ACGT 4 cut(s) 400, 2053, 2426, 3332
TaqI TCGA 8 cut(s) 111, 138, 227, 750, 1389, 2108, 2247, 2812
TatI WGTACW 1 cut(s) 2887
TauI GCSGC 2 cut(s) 39, 48
TfiI GAWTC 7 cut(s) 200, 239, 269, 482, 2777, 2876, 3074
TscAI CASTG 3 cut(s) 1382, 2826, 3015
TseFI GTSAC 3 cut(s) 356, 1490, 2627
TseI GCWGC 9 cut(s) 622, 1001, 1592, 1634, 1796, 1892, 2102, 2603, 3044
Tsp45I GTSAC 3 cut(s) 356, 1490, 2627
TspGWI ACGGA 3 cut(s) 650, 1601, 2153
TspRI CASTG 3 cut(s) 1382, 2826, 3015
Tth111I GACNNNGTC 2 cut(s) 143, 1186
VneI GTGCAC 1 cut(s) 697
VpaK11BI GGWCC 1 cut(s) 1237
XapI RAATTY 5 cut(s) 781, 2622, 2921, 3161, 3401
XbaI TCTAGA 1 cut(s) 311
XceI RCATGY 5 cut(s) 1705, 2514, 2547, 2672, 3283
XcmI CCANNNNNNNNNTGG 2 cut(s) 1253, 1973
XmaJI CCTAGG 1 cut(s) 284
XmiI GTMKAC 1 cut(s) 1190
XmnI GAANNNNTTC 3 cut(s) 861, 2946, 3304
XspI CTAG 8 cut(s) 285, 312, 444, 702, 2456, 3071, 3290, 3314
Zsp2I ATGCAT 2 cut(s) 1218, 2674
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.