FvH4_5g01750

Plant family of unknown function (DUF810)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
OG0007415
Physical Location & Seq
Forward (+)
1106039 .. 1117432
11394 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g01750.t2

Sequence Viewer

Length: 3414 bp
ATGGAGGAGCACCACTCCCTCTTCCACCGCTACCGCCGTGACCGCCGTAACCTTCTACAGTTTCTCGTGTCTTCTTCTTCGGCATCTGCCTCCTCCTCCCTCTCTCACGTCGATTTCGATACTCTCAGCGCCGATTACGTCATCGATTGCGTCAAATCCGGTGGAGCGGTGGATATATCCGAAGCTACTAAGAAGTACTTCCATGAATCTTCGTATCCTCCCACGATTCATTCGAAATTAGGGGATTCGTTTTTGTTACATACTGATCCAGATTCATCGGGATCACCTCCTCGGCGTCCGCCGCCTTCTCCTATAGGTGTTAGAAGAACTACTACTAATGCATCAAGTTCATTTAGACAGCTGGGATCGTTCAAAGATGAGAACATTAAAAAGAGTGGCGATGAGTGTGGTTTTAAATATAGAGCCTCACCGAGCTCACGTCCAAAGCCTGTTGAATCCTTTAAAATTGTTTCGTTGGGATTGCCTAGTCTGAAAACAGGATTATCCGATGATGACTTGCGGGAGTCAGCGTATGAAATATTGCTTGCATCTATGGCAACATCTGGGATTGTAATCTGTTCTGTTGAAGATCAAAGGAAACATAGGACTTCCAAGTTGCTGTCAGGATTAAAGAGTAGAAAATGGGATAAACCAAATGTGCAGTCACAGCCTCTTGATAAAAACTTACAGCTGCTCCGTACCTTCCGTGTGCAGATGCAGATTTCTGAAGCGATGGATGAGTGCACCAGACAGAAGATGATGATGTTATCTCCAGGGAAAACACGGGTGCAGATTGATATTCCTCAAATTGTGTTGGGGCTTTTGAATTTCACTTTTAAGTCTGATTTTTCGAATGAAAAGTCTTATATGCAATGGAAGAATAGACAGGCAAGTATCTTAGAAGAACTTCTCTGCTTTTCTCCCGATCTTGTGGCACATGATCATCTAACTATCAAGCGTTCTCTTGCTATGATTAGAAATGCAAAGGAATGGGACTGTATGTCTACTTCTGGAAGGGCAGAGGTTATATCGGTTATCAAGAAGGTAGCTTTAACGCTGTCATCTCTTCCAGGACGCTTTGATCTCCAAAGTGAGACCTATTATTGGACTTCTGGGTATCACCTGAATATTAGGCTTTACGAGAAACTACTACTTGGTGTATTTGATGTTCTTGATGAAGGCCAGCTGATAGCGGAAGCTGATGAGTACCTGATGCTCTTGAAATTGACATGGTCTACTTTAGGCATCACTCAAAAAATGCATGATGCAATATATTTGTGGGTCCTTTTCCAACAGTTTATTGGAACAGATGAGGCTCTGCTATTAGAGAATGCAACAGTGGAGTTGCAGGAACTTATATCAACTAAAGTTGATGATGAGAACGTAAGGCTATATATGAATAGCCTGCTATGTTCAATCCACTACAATGCTGTCGAGATAAAGTTAAGTTTGGTTGATGCTGTCTTCTACTCTTTAAGCATCTGGTGTGAGAGTAAACTCCAAGACTATCATCTGCATTTCACTCAGCAACATGGTCACTTGAAGAGGGTGATGAGCTTTGTGTCAGCAGTTGGGGTTCTTAATTTTGGTGATAGTGGTCCTATGAAGTTGAAGAGGTTCAATCTCAATGCGGATGCTGCTATAATTGAGTCGTATGTGAAAAGGTCAATTGAAGCTGCATATAGGCGGGTAGCAAGTAACATAGATCACTTATCAGAAGTGAAAAACCAACATCCTTTAGGTGTGCTTGCAAATGAACTGAGGTTGATTGCTGAGAGAGAACTAAATATGTTCTACCCAGAACTATGCAAATGGTGCCCTAATTCTGGGATGATTGCGGCTATAATGTTGCACCAGATGTATTGGGAAAGGCTGAAACCCTTTCTGGATGGAGTGTCATCTCTTTCTGAAGATGTTAAAATTGTGCTTCCAGCTGCTGATTTGTTGGATCATGTCCTAACTCAGCTATACAATACTGGTAATGGAGAAAATAGTGAAGATCTGCACCATTATCCGATTGGTGAAGTTGCTAAACCTATCATTCTTGATTGGGTGATTGCTCAGCATGAACGCATCTTGGAATGGACTGGACGTGCTTTTGATCTTGAGAAGTGGGAACCTTTGTCATCTCAGCAAAAACAGGCAGCATCAATAGTTGAAGTTTTTAGAATTATAGAGGAGACTGTGGATCAATTATTTGGCTTCCATCTCCCTATGGATATTACTCATTTGCAAGCTCTGGTATCTGTTGTCTTTCATACCTTGGATGCCTATTTGCTGAAGTTGCTCGACCAGATAGTTGAGAAAAAATACTTATATCCATCAGCTCCTCCATTGACTCGCTACAAGGAGACTACAATTCCAGTGTTGAAAAAGAAGTTTCTTGAGTGTATGCCTTTGGACGGAAATGTGCATGACAAGTTGAATAATCTGACGATATCCAAACTCTGTGTCCGAATGAACACGTTAAAATATATTCAAAAACAAATTGACATACTAGAAGGCGGTATCAGAAGTTCTTGGGCACTTGTCAGGCAATCCATTGATAAAACATGTGCCAAAGAGCAGCATTTTGGAACTTCAACATGCAATGATCAAATTGATGAGCTCTTCAACACCACCTTTGACATCATCAGGGATACTGCTGCAAATGCCATCAGCAAAATTTGTGACTTCATTGGTGCAAAAGCCGTGTTCTGGGATCTCAGACATGCATTCCTCTTTGGTTTATATTGTGGTAGCGTTGAAGCTTCTCGTTTGGATGGTGTTCTCACACGCATTGATACTGTCCTTGGCCATGTATGCAATTTTATTGATGATTCTCTCAGAGACGCTGTGGTTTTTAGCATCTGTCGAGCATCACTGGAAGGCTTTGCGTGGGTTTTGCTTGATGGTGGGCCTTCCCGTGCATTTTGTGAATCAGATATTGTACTATTAGAAGATGACCTTTCTGCACTAAAGGATTTTTTTGTAGCTGATGGTGAAGGCCTTCCTCGATCAGTAGTGGAGCAAGAATCAAAGTTCCCGGAGCAAATACTGAACTTGTATTCACTACAGACTGAAACTATCATTCAAAAGCTGATGGCTGCAAGTGAACAAATATCGTCGGGGCTAGATTCATATGATCATAACTATAGACGCTTAAATAATGCCCACACTTTTGTGAGGGTGTTATGCCACAAAAAAGATAGAGAAGCCTCTAAATTCTTGAAAAGGCAATATCAGCTGCCCATGTCTACAGAATATGAAGACACTCCATCAACGGATCCAACTTCCCAATCACCTCTCAGATCAGATCTATCAAAGCGAAGCACGTCCACGTCCTTTCGGTGGAATAATACTCATAGCACCTTTACCTCGTTTAAGAAGAAACTTCAAGAAGCAACATCTGAACTCCGGAACGTAGGGTGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF810

Protein Analysis

1138

Amino Acids

129.16

Weight (kDa)

6.19

Isoelectric Point (pI)

44.97

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TPR_PATROL1 PF25761 442 - 840 2.2e-101 PATROL1-like, TPR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1815
AccBSI CCGCTC 1 cut(s) 167
AccI GTMKAC 3 cut(s) 1004, 1235, 3236
AccIII TCCGGA 1 cut(s) 3396
AclWI GGATC 8 cut(s) 260, 289, 373, 1956, 2196, 2709, 3260, 3273
AcoI YGGCCR 1 cut(s) 2794
AcsI RAATTY 3 cut(s) 826, 2664, 3203
AcuI CTGAAG 3 cut(s) 747, 1929, 2300
AcyI GRCGYC 1 cut(s) 295
AfaI GTAC 4 cut(s) 197, 700, 1208, 2931
AfiI CCNNNNNNNGG 5 cut(s) 1104, 1826, 2402, 2697, 3330
AflIII ACRYGT 2 cut(s) 2463, 2552
AhdI GACNNNNNGTC 1 cut(s) 1000
AjiI CACGTC 5 cut(s) 109, 440, 2093, 3315, 3321
AjnI CCWGG 2 cut(s) 772, 1069
AleI CACNNNNGTG 1 cut(s) 3161
Alw21I GWGCWC 4 cut(s) 12, 437, 746, 2610
Alw26I GTCTC 4 cut(s) 1088, 2174, 2345, 2823
Alw44I GTGCAC 1 cut(s) 742
AlwI GGATC 8 cut(s) 260, 289, 373, 1956, 2196, 2709, 3260, 3273
AlwNI CAGNNNCTG 1 cut(s) 1937
Aor13HI TCCGGA 1 cut(s) 3396
AoxI GGCC 4 cut(s) 1180, 2794, 2897, 2986
ApaLI GTGCAC 1 cut(s) 742
ApeKI GCWGC 9 cut(s) 691, 1637, 1676, 1934, 2144, 2566, 2645, 3086, 3226
ApoI RAATTY 3 cut(s) 826, 2664, 3203
ArsI GACNNNNNNTTYG 6 cut(s) 647, 679, 845, 877, 2436, 2468
Asp700I GAANNNNTTC 4 cut(s) 197, 906, 1616, 2988
AspLEI GCGC 1 cut(s) 131
AspS9I GGNCC 3 cut(s) 1282, 1598, 2897
AsuC2I CCSGG 1 cut(s) 3026
AsuHPI GGTGA 9 cut(s) 276, 420, 1112, 1561, 1601, 2033, 2065, 2993, 3273
AsuII TTCGAA 2 cut(s) 233, 851
AvaII GGWCC 2 cut(s) 1282, 1598
BaeGI GKGCMC 3 cut(s) 746, 1820, 2527
BalI TGGCCA 1 cut(s) 2796
BamHI GGATCC 1 cut(s) 3265
BanI GGYRCC 1 cut(s) 1815
BanII GRGCYC 2 cut(s) 437, 2610
BarI GAAGNNNNNNTAC 4 cut(s) 316, 348, 991, 1023
BauI CACGAG 1 cut(s) 65
BbsI GAAGAC 3 cut(s) 63, 1456, 3255
Bbv12I GWGCWC 4 cut(s) 12, 437, 746, 2610
BbvI GCAGC 9 cut(s) 678, 1624, 1663, 1921, 2156, 2578, 2632, 3073, 3213
BceAI ACGGC 3 cut(s) 21, 30, 2675
BciT130I CCWGG 2 cut(s) 774, 1071
BciVI GTATCC 2 cut(s) 225, 2632
BclI TGATCA 3 cut(s) 940, 2593, 3124
BcnI CCSGG 1 cut(s) 3026
BcoDI GTCTC 4 cut(s) 1088, 2174, 2345, 2823
BfaI CTAG 3 cut(s) 486, 2498, 3113
BfmI CTRYAG 5 cut(s) 56, 312, 3053, 3133, 3237
BfoI RGCGCY 1 cut(s) 132
BfuI GTATCC 2 cut(s) 225, 2632
BglII AGATCT 2 cut(s) 1999, 3295
BlpI GCTNAGC 1 cut(s) 2061
BmcAI AGTACT 1 cut(s) 197
Bme1390I CCNGG 3 cut(s) 774, 1071, 3026
Bme18I GGWCC 2 cut(s) 1282, 1598
BmeRI GACNNNNNGTC 1 cut(s) 1000
BmgBI CACGTC 5 cut(s) 109, 440, 2093, 3315, 3321
BmgT120I GGNCC 3 cut(s) 1282, 1598, 2897
BmiI GGNNCC 4 cut(s) 1283, 1817, 2118, 3267
BmrFI CCNGG 3 cut(s) 774, 1071, 3026
BpiI GAAGAC 3 cut(s) 63, 1456, 3255
BplI GAGNNNNNCTC 1 cut(s) 31
BpmI CTGGAG 1 cut(s) 756
Bpu1102I GCTNAGC 1 cut(s) 2061
Bpu14I TTCGAA 2 cut(s) 233, 851
BpuEI CTTGAG 2 cut(s) 2126, 2405
BpuMI CCSGG 1 cut(s) 3026
Bsa29I ATCGAT 1 cut(s) 144
BsaBI GATNNNNATC 1 cut(s) 572
BsaHI GRCGYC 1 cut(s) 295
BsaI GGTCTC 1 cut(s) 1088
BsaJI CCNNGG 4 cut(s) 290, 773, 2262, 2791
BsaWI WCCGGW 2 cut(s) 158, 3396
BsaXI ACNNNNNCTCC 4 cut(s) 515, 545, 678, 708
Bsc4I CCNNNNNNNGG 5 cut(s) 1104, 1826, 2402, 2697, 3330
Bse1I ACTGG 4 cut(s) 1981, 2092, 2363, 2868
Bse3DI GCAATG 2 cut(s) 878, 2596
Bse8I GATNNNNATC 1 cut(s) 572
BseAI TCCGGA 1 cut(s) 3396
BseBI CCWGG 2 cut(s) 774, 1071
BseCI ATCGAT 1 cut(s) 144
BseDI CCNNGG 4 cut(s) 290, 773, 2262, 2791
BseGI GGATG 7 cut(s) 742, 1639, 1732, 1836, 1894, 2272, 2767
BseJI GATNNNNATC 1 cut(s) 572
BseLI CCNNNNNNNGG 5 cut(s) 1104, 1826, 2402, 2697, 3330
BseMI GCAATG 2 cut(s) 878, 2596
BseNI ACTGG 4 cut(s) 1981, 2092, 2363, 2868
BseRI GAGGAG 6 cut(s) 20, 82, 85, 279, 2192, 2319
BseSI GKGCMC 3 cut(s) 746, 1820, 2527
BseXI GCAGC 9 cut(s) 678, 1624, 1663, 1921, 2156, 2578, 2632, 3073, 3213
BseYI CCCAGC 1 cut(s) 361
BsgI GTGCAG 5 cut(s) 680, 731, 809, 1988, 2937
BshFI GGCC 4 cut(s) 1182, 2796, 2899, 2988
BshNI GGYRCC 1 cut(s) 1815
BshVI ATCGAT 1 cut(s) 144
BsiHKAI GWGCWC 4 cut(s) 12, 437, 746, 2610
BsiSI CCGG 3 cut(s) 159, 3026, 3397
BslFI GGGAC 1 cut(s) 1007
BslI CCNNNNNNNGG 5 cut(s) 1104, 1826, 2402, 2697, 3330
BsmAI GTCTC 4 cut(s) 1088, 2174, 2345, 2823
BsmBI CGTCTC 1 cut(s) 2823
BsmFI GGGAC 1 cut(s) 1007
BsmI GAATGC 2 cut(s) 1336, 2714
BsnI GGCC 4 cut(s) 1182, 2796, 2899, 2988
Bso31I GGTCTC 1 cut(s) 1088
Bsp119I TTCGAA 2 cut(s) 233, 851
Bsp1286I GDGCHC 6 cut(s) 12, 437, 746, 1820, 2527, 2610
Bsp13I TCCGGA 1 cut(s) 3396
Bsp1720I GCTNAGC 1 cut(s) 2061
BspANI GGCC 4 cut(s) 1182, 2796, 2899, 2988
BspDI ATCGAT 1 cut(s) 144
BspEI TCCGGA 1 cut(s) 3396
BspLI GGNNCC 4 cut(s) 1283, 1817, 2118, 3267
BspPI GGATC 8 cut(s) 260, 289, 373, 1956, 2196, 2709, 3260, 3273
BspQI GCTCTTC 1 cut(s) 2615
BspT104I TTCGAA 2 cut(s) 233, 851
BspT107I GGYRCC 1 cut(s) 1815
BspTNI GGTCTC 1 cut(s) 1088
BsrBI CCGCTC 1 cut(s) 167
BsrDI GCAATG 2 cut(s) 878, 2596
BsrI ACTGG 4 cut(s) 1981, 2092, 2363, 2868
BssECI CCNNGG 4 cut(s) 290, 773, 2262, 2791
BssNI GRCGYC 1 cut(s) 295
BssSI CACGAG 1 cut(s) 65
BssT1I CCWWGG 2 cut(s) 2262, 2791
Bst2BI CACGAG 1 cut(s) 65
Bst2UI CCWGG 2 cut(s) 774, 1071
Bst4CI ACNGT 6 cut(s) 60, 998, 1296, 1339, 2185, 2788
Bst6I CTCTTC 5 cut(s) 26, 1071, 1538, 1607, 2615
BstACI GRCGYC 1 cut(s) 295
BstAPI GCANNNNNTGC 1 cut(s) 1815
BstBI TTCGAA 2 cut(s) 233, 851
BstC8I GCNNGC 5 cut(s) 546, 1184, 1406, 1749, 2235
BstF5I GGATG 7 cut(s) 742, 1639, 1732, 1836, 1894, 2272, 2767
BstH2I RGCGCY 1 cut(s) 132
BstHHI GCGC 1 cut(s) 131
BstMAI GTCTC 4 cut(s) 1088, 2174, 2345, 2823
BstNI CCWGG 2 cut(s) 774, 1071
BstNSI RCATGY 3 cut(s) 2556, 2589, 2714
BstSCI CCNGG 3 cut(s) 772, 1069, 3024
BstSFI CTRYAG 5 cut(s) 56, 312, 3053, 3133, 3237
BstSLI GKGCMC 3 cut(s) 746, 1820, 2527
BstV1I GCAGC 9 cut(s) 678, 1624, 1663, 1921, 2156, 2578, 2632, 3073, 3213
BstV2I GAAGAC 3 cut(s) 63, 1456, 3255
BstX2I RGATCY 4 cut(s) 1999, 2701, 3265, 3295
BstYI RGATCY 4 cut(s) 1999, 2701, 3265, 3295
Bsu15I ATCGAT 1 cut(s) 144
BsuI GTATCC 2 cut(s) 225, 2632
BsuRI GGCC 4 cut(s) 1182, 2796, 2899, 2988
BsuTUI ATCGAT 1 cut(s) 144
BtgZI GCGATG 2 cut(s) 414, 746
BtrI CACGTC 5 cut(s) 109, 440, 2093, 3315, 3321
BtsCI GGATG 7 cut(s) 742, 1639, 1732, 1836, 1894, 2272, 2767
BtsIMutI CAGTG 3 cut(s) 1344, 2370, 2861
Cac8I GCNNGC 5 cut(s) 546, 1184, 1406, 1749, 2235
CaiI CAGNNNCTG 1 cut(s) 1937
CfoI GCGC 1 cut(s) 131
Cfr13I GGNCC 3 cut(s) 1282, 1598, 2897
ClaI ATCGAT 1 cut(s) 144
CseI GACGC 5 cut(s) 139, 284, 1083, 2840, 3147
Csp6I GTAC 4 cut(s) 196, 699, 1207, 2930
CspCI CAANNNNNGTGG 2 cut(s) 142, 177
CviQI GTAC 4 cut(s) 196, 699, 1207, 2930
DraI TTTAAA 2 cut(s) 415, 463
DriI GACNNNNNGTC 1 cut(s) 1000
EaeI YGGCCR 1 cut(s) 2794
Eam1104I CTCTTC 5 cut(s) 26, 1071, 1538, 1607, 2615
Eam1105I GACNNNNNGTC 1 cut(s) 1000
EarI CTCTTC 5 cut(s) 26, 1071, 1538, 1607, 2615
EciI GGCGGA 1 cut(s) 288
Ecl136II GAGCTC 2 cut(s) 435, 2608
Eco130I CCWWGG 2 cut(s) 2262, 2791
Eco147I AGGCCT 1 cut(s) 2988
Eco24I GRGCYC 2 cut(s) 437, 2610
Eco31I GGTCTC 1 cut(s) 1088
Eco32I GATATC 1 cut(s) 2439
Eco47I GGWCC 2 cut(s) 1282, 1598
Eco53kI GAGCTC 2 cut(s) 435, 2608
Eco57I CTGAAG 3 cut(s) 747, 1929, 2300
EcoICRI GAGCTC 2 cut(s) 435, 2608
EcoO109I RGGNCCY 1 cut(s) 1282
EcoRII CCWGG 2 cut(s) 772, 1069
EcoRV GATATC 1 cut(s) 2439
EcoT14I CCWWGG 2 cut(s) 2262, 2791
EcoT22I ATGCAT 3 cut(s) 343, 1263, 2716
EcoT38I GRGCYC 2 cut(s) 437, 2610
ErhI CCWWGG 2 cut(s) 2262, 2791
Esp3I CGTCTC 1 cut(s) 2823
FalI AAGNNNNNCTT 4 cut(s) 182, 214, 2931, 2963
FaqI GGGAC 1 cut(s) 1007
FauI CCCGC 2 cut(s) 513, 1680
FauNDI CATATG 1 cut(s) 3121
FbaI TGATCA 3 cut(s) 940, 2593, 3124
FblI GTMKAC 3 cut(s) 1004, 1235, 3236
FokI GGATG 7 cut(s) 749, 1646, 1719, 1843, 1901, 2279, 2774
FriOI GRGCYC 2 cut(s) 437, 2610
FspBI CTAG 3 cut(s) 486, 2498, 3113
GlaI GCGC 1 cut(s) 130
GsaI CCCAGC 1 cut(s) 365
GsuI CTGGAG 1 cut(s) 756
HaeII RGCGCY 1 cut(s) 132
HaeIII GGCC 4 cut(s) 1182, 2796, 2899, 2988
HapII CCGG 3 cut(s) 159, 3026, 3397
HgaI GACGC 5 cut(s) 139, 284, 1083, 2840, 3147
HhaI GCGC 1 cut(s) 131
Hin1I GRCGYC 1 cut(s) 295
Hin6I GCGC 1 cut(s) 129
HinP1I GCGC 1 cut(s) 129
HindIII AAGCTT 1 cut(s) 2748
HpaII CCGG 3 cut(s) 159, 3026, 3397
HphI GGTGA 9 cut(s) 276, 420, 1112, 1561, 1601, 2033, 2065, 2993, 3273
Hpy166II GTNNAC 7 cut(s) 744, 1005, 1236, 1496, 3095, 3237, 3318
Hpy8I GTNNAC 7 cut(s) 744, 1005, 1236, 1496, 3095, 3237, 3318
Hpy99I CGWCG 2 cut(s) 113, 3109
HpyCH4III ACNGT 6 cut(s) 60, 998, 1296, 1339, 2185, 2788
HpyCH4IV ACGT 9 cut(s) 108, 138, 439, 1383, 2092, 2465, 3314, 3320, 3402
HpySE526I ACGT 9 cut(s) 108, 138, 439, 1383, 2092, 2465, 3314, 3320, 3402
Hsp92I GRCGYC 1 cut(s) 295
HspAI GCGC 1 cut(s) 129
Kpn2I TCCGGA 1 cut(s) 3396
Ksp22I TGATCA 3 cut(s) 940, 2593, 3124
LguI GCTCTTC 1 cut(s) 2615
LmnI GCTCC 6 cut(s) 7, 164, 699, 2332, 3007, 3028
Lsp1109I GCAGC 9 cut(s) 678, 1624, 1663, 1921, 2156, 2578, 2632, 3073, 3213
MaeI CTAG 3 cut(s) 486, 2498, 3113
MaeII ACGT 9 cut(s) 108, 138, 439, 1383, 2092, 2465, 3314, 3320, 3402
MaeIII GTNAC 7 cut(s) 38, 47, 255, 663, 1535, 1697, 2669
MbiI CCGCTC 1 cut(s) 167
MfeI CAATTG 1 cut(s) 1668
MflI RGATCY 4 cut(s) 1999, 2701, 3265, 3295
MhlI GDGCHC 6 cut(s) 12, 437, 746, 1820, 2527, 2610
MlsI TGGCCA 1 cut(s) 2796
MluNI TGGCCA 1 cut(s) 2796
MlyI GAGTC 3 cut(s) 533, 1658, 2332
MmeI TCCRAC 3 cut(s) 1315, 1926, 3293
Mox20I TGGCCA 1 cut(s) 2796
Mph1103I ATGCAT 3 cut(s) 343, 1263, 2716
MroI TCCGGA 1 cut(s) 3396
MroXI GAANNNNTTC 4 cut(s) 197, 906, 1616, 2988
MscI TGGCCA 1 cut(s) 2796
MslI CAYNNNNRTG 2 cut(s) 1425, 3161
Msp20I TGGCCA 1 cut(s) 2796
MspA1I CMGCKG 5 cut(s) 361, 691, 1186, 1934, 3226
MspI CCGG 3 cut(s) 159, 3026, 3397
MspR9I CCNGG 3 cut(s) 774, 1071, 3026
MunI CAATTG 1 cut(s) 1668
Mva1269I GAATGC 2 cut(s) 1336, 2714
MvaI CCWGG 2 cut(s) 774, 1071
NciI CCSGG 1 cut(s) 3026
NdeI CATATG 1 cut(s) 3121
NlaIV GGNNCC 4 cut(s) 1283, 1817, 2118, 3267
NmeAIII GCCGAG 1 cut(s) 271
NmuCI GTSAC 4 cut(s) 38, 663, 1535, 2669
NsiI ATGCAT 3 cut(s) 343, 1263, 2716
NspI RCATGY 3 cut(s) 2556, 2589, 2714
NspV TTCGAA 2 cut(s) 233, 851
OliI CACNNNNGTG 1 cut(s) 3161
PceI AGGCCT 1 cut(s) 2988
PciI ACATGT 1 cut(s) 2552
PciSI GCTCTTC 1 cut(s) 2615
PcsI WCGNNNNNNNCGW 2 cut(s) 114, 230
PctI GAATGC 2 cut(s) 1336, 2714
PdmI GAANNNNTTC 4 cut(s) 197, 906, 1616, 2988
PfeI GAWTC 9 cut(s) 206, 226, 245, 272, 455, 2819, 2918, 3014, 3116
PflFI GACNNNGTC 1 cut(s) 1231
PfoI TCCNGGA 2 cut(s) 1069, 3024
PleI GAGTC 3 cut(s) 532, 1657, 2332
PpsI GAGTC 3 cut(s) 532, 1657, 2332
PpuMI RGGWCCY 1 cut(s) 1282
PscI ACATGT 1 cut(s) 2552
Psp124BI GAGCTC 2 cut(s) 437, 2610
Psp5II RGGWCCY 1 cut(s) 1282
Psp6I CCWGG 2 cut(s) 772, 1069
PspFI CCCAGC 1 cut(s) 361
PspGI CCWGG 2 cut(s) 772, 1069
PspN4I GGNNCC 4 cut(s) 1283, 1817, 2118, 3267
PspPI GGNCC 3 cut(s) 1282, 1598, 2897
PspPPI RGGWCCY 1 cut(s) 1282
PsrI GAACNNNNNNTAC 4 cut(s) 1152, 1184, 2500, 2532
PstNI CAGNNNCTG 1 cut(s) 1937
PsuI RGATCY 4 cut(s) 1999, 2701, 3265, 3295
PsyI GACNNNGTC 1 cut(s) 1231
PvuII CAGCTG 5 cut(s) 361, 691, 1186, 1934, 3226
RsaI GTAC 4 cut(s) 197, 700, 1208, 2931
RsaNI GTAC 4 cut(s) 196, 699, 1207, 2930
RseI CAYNNNNRTG 2 cut(s) 1425, 3161
SacI GAGCTC 2 cut(s) 437, 2610
SapI GCTCTTC 1 cut(s) 2615
Sau96I GGNCC 3 cut(s) 1282, 1598, 2897
ScaI AGTACT 1 cut(s) 197
SchI GAGTC 3 cut(s) 533, 1658, 2332
ScrFI CCNGG 3 cut(s) 774, 1071, 3026
SduI GDGCHC 6 cut(s) 12, 437, 746, 1820, 2527, 2610
SfcI CTRYAG 5 cut(s) 56, 312, 3053, 3133, 3237
SfuI TTCGAA 2 cut(s) 233, 851
SinI GGWCC 2 cut(s) 1282, 1598
SmiMI CAYNNNNRTG 2 cut(s) 1425, 3161
SmlI CTYRAG 2 cut(s) 2105, 2384
SmoI CTYRAG 2 cut(s) 2105, 2384
SseBI AGGCCT 1 cut(s) 2988
SspI AATATT 2 cut(s) 540, 1129
SspMI CTAG 3 cut(s) 486, 2498, 3113
SstI GAGCTC 2 cut(s) 437, 2610
StuI AGGCCT 1 cut(s) 2988
StyD4I CCNGG 3 cut(s) 772, 1069, 3024
StyI CCWWGG 2 cut(s) 2262, 2791
TaaI ACNGT 6 cut(s) 60, 998, 1296, 1339, 2185, 2788
TaiI ACGT 9 cut(s) 111, 141, 442, 1386, 2095, 2468, 3317, 3323, 3405
TaqI TCGA 9 cut(s) 111, 117, 144, 233, 851, 1434, 2289, 2854, 2995
TatI WGTACW 2 cut(s) 195, 2929
TauI GCSGC 2 cut(s) 304, 1841
TfiI GAWTC 9 cut(s) 206, 226, 245, 272, 455, 2819, 2918, 3014, 3116
TscAI CASTG 3 cut(s) 1344, 2370, 2868
TseFI GTSAC 4 cut(s) 38, 663, 1535, 2669
TseI GCWGC 9 cut(s) 691, 1637, 1676, 1934, 2144, 2566, 2645, 3086, 3226
Tsp45I GTSAC 4 cut(s) 38, 663, 1535, 2669
TspGWI ACGGA 4 cut(s) 686, 695, 2418, 3278
TspRI CASTG 3 cut(s) 1344, 2370, 2868
Tth111I GACNNNGTC 1 cut(s) 1231
VneI GTGCAC 1 cut(s) 742
VpaK11BI GGWCC 2 cut(s) 1282, 1598
XapI RAATTY 3 cut(s) 826, 2664, 3203
XceI RCATGY 3 cut(s) 2556, 2589, 2714
XcmI CCANNNNNNNNNTGG 2 cut(s) 1298, 2015
XmiI GTMKAC 3 cut(s) 1004, 1235, 3236
XmnI GAANNNNTTC 4 cut(s) 197, 906, 1616, 2988
XspI CTAG 3 cut(s) 486, 2498, 3113
ZrmI AGTACT 1 cut(s) 197
Zsp2I ATGCAT 3 cut(s) 343, 1263, 2716
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.