MD00G1110400.v1.1

Plant family of unknown function (DUF810)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr00
OG0007415
Physical Location & Seq
Reverse (-)
23072727 .. 23085415
12689 bp
Loading structure...
UTR
Exon/CDS
Intron
MD00G1110400.v1.1.491

Sequence Viewer

Length: 3441 bp
ATGATGGAGCACCACCAACCTTTGCTGCAGCGATATCGCCGTGATCGTCGCAAGCTCTTAGAATTCCTCTTTTCGTCGGGTCTGGTCCGAACGCTGTCCGGGTCAGACTCCGCCCCCGCGTCCGCCGCCTCCATCTCCCACATCGATTTCGATACTATCAGCGCCGATTATGTCCTCGACTGCGTCAAATCTGGTGGAGTGGTGGATATATCTGAAGCAACCAAGAAGTACTTTCGTGAATCTTCTTACCCTCTAATGATTCAATCCGAATTATGGGATTCCTTTTTCCTAGTTTCTGATCCAGAATCATCTGGATCACCTCCTCGGCGTGTGCCTACTCCCGTACATGTGAACCGGACCGCTAACAATGCATCAAGTTCATCCGCACAGCTGAATTCTTTGAGTGTTGGGGACATTGAAAAGGCTGGTGATGACTATGGTGTCAAATATAGAGCCATGCCAAGTGCACCTCCAAAGCATGTTGAAGAGGTTAAAGTGCTACCGTTGGGATTGCCTCGTCTAAACACAGGATTGTCGGATGATGACTTGCGGGAGTCAGCCTATGAAATATTGTTAGCATCTTTGGCAACTTCTGGGATTGTAATATGTTCAGTTGAGGATAGAAAGAAGCAAAGGAGTTCAAAATTGCTGTCACGATTGAAGAGTAGAAGGGAAACAACAAATGTGCAGTCTCAACCACTTGAAAGAGATTTACGGCTCATCCACACCATCCGTGTGCAAATGCAGATTTCAGAAGCGATGGATGAAAGCACTAGGCAAAAGTTGATGCTGTTAGCGTCAGGGAGAACGCGGGCACAAATCGATGTTCCTCAAATCTTGTTGGGGCTTGTAAATGGAACTTTTAAGTCTGATTTTCCAAATGAAAAGTCTTATATGCAGTGGAAGAATAGACAGGCAAGTATATTAGAAGAACTTCTCTGTTTTTCTGCTGACCTTGTAGCACATGATAATCGAGCTATTATGAGTGCTCTTGCTATGGTAAAAAATGCAAAGGAATGGGACTTTATGTCTCTTTCTGAACGGGCTGAGGTTCTATCAGTTATCAAACAGGTGGCTTTGAAGTTCTCATCTCTTCCAGGGCACTTGGGTATCGAAAGTGAGACCTATTATTGGACTTCTGCGTATCACCTGAATATTAGACTTTATGAGAAACTACTTCTTGGTGTATTTGATGCTCTTGATGAAGGCCAGCTAATAGCGGAAGCCGATGAGTTCCTGATGCTTTTAAAATTGACATGGTCCACTTTAGGCCTCACTCAAAAAATCCATGATGCAATATATGGGTGGGTCCTTTTCCAACAGTTTGTTGAAACAGGCGAGCCTTTGCTATTAGAATATGCAACAGTGGAGTTGCTGAAACTTATATCAGCTAAAGGTGATGATAAGAAGTTGAGGCTATATAGCAATAGCCTGCTATGTTCTAGGCAGTGCAATGACAGCGAGATAAAACTTAGTTTGGTTGACGCTGTCTTCTACTCGATAAGCATCTGGTGTGAGAGCAAACTGGAAGACTATCATCTCCATTTTAGTCAGCAACCTTATCACATAAAGAGGGTGATGAGCTTATTGTCAGTAGTTGGCATTTATACTTTTGGCGATGGTGGTGATAATAAGTTGAGCAGGTTGAATATTCCAGATGAGGACGCTGCTAAAATATTTGAATCTTATGTGGAAAGGTCCATTGAAGCAGCATACAGGCGGGCAGCAAGTAACGTCGAACATTTATCCAAAGTGGAAAAAAGGCATCCCTTGGAAGTACTTGCAAATGAACTCAGGTTGATATCTGAGAAAGAGTTCAATGTCTTCTACCCGGAGATATGTAAATGGTGTCCTAAATCTGTGACGATGGTGGCTATGCTATTGCACCAGATTTTTTGGGGAAGACTGAAACCATTTCTTGATGGGGTGTCATCTCTCTCTGAAGATGTTAAAGCAGTTCTTCCAGCTGCTGATTTATTGGATCATGGCCTAACTCAGCTATATAATCTTGTTGATGGAGCAAATAGCAAACATTTGCACCATTATCCGATTGGTGAAGTTGCTAAACCTCTCATTCTTGATTGGGTGATTGCTCAGCATGAACGTATCTTGGAGTGGACTGGACGCGCATTTGATCTTGAGGAGTGGGAGCCTTTGTCGACTCAGCAAAGACAGGCAGCATCAATAATTGAAGTATTTAGAATTGTAGAAGAGAGTGTGGATCAATTTTTTGGTTTTAATCTCCCTATGGACATCACGCATTTGCAAGCTCTGTTATCTGTTGTCTTCCACACCCTGGATAACTATTTGGTGAAATTGCTTGACAAGCTAGTTGAGAAGAATCATTTATATCCATCAGCTCCTCCATTGACTCGTTACAAGGAGACGACGATTCCAGTAATGAAGAAAAAGTTGCTTGAGTGTATGCCTCTGGATGACAATGTGTACAACAAGTTGAATAGTTTGACGATACCCAGACTCTGTATCAGACTGAACACTTTAAAATATATACAGAAACAAATAGATATACTAGAAGATGGCATCAGAAAATCTTGGGCACTTGTTAGACAACCTGTTCATAAAAAATGGGACAAGGAACATTCTTCAAGAACAACATCTAATGAACAAGTCGATGAGCTCTTTGTCAACACCTTTGAAATTATCAGGGACACTGCAGCAAATGCTATCAGCAAACTTTGTGACTTTACTGGTGCAAGAATCGTGTTCTGGGATCTCAGACATGCATTTCTTTTTGGTTTGTACTGTGGTAATGTTGAAGGTGCTCGTTTGGATGGTGTTCTTTCACATATTGATGCTGTCCTTGGCCATGTGTGTGGGTTTATTGATGACTCTCTTCGAGATGCTGTGGTTTCAAGCATTTGTCGGGCATCACTGGAAGGCTTTGCATGGGTGCTGCTCGATGGAGGGCCTTCTCGTGCATTTAGTGATTCAGATATTGCACTGATGGAGGATGACCTGACCACACTAAAGGAATTTTTCGTAGCTGATGGAGAAGGCCTTCCTCGATCACTAGTGGAGCAGGAAGCAAAATTGGCTGAGCAGATACTGAACTTGTATTCTTTTCAGACTGAAACGATTATCCAAATGCTGATGGCTGCAAGTGAACAAATATCATCAGGCTTAGATTCACATGATCAGAGTCATATGCGTTTACATAACGCACACACTTTGGTACGGGTTTTGTGCCACAAGAAAGATAGAGAAGCCTCCAAATTCTTGAAAAGGCAATATCAATTCCCCATGTCATCAGAGTACGAAGACACTCCATCAACGGATCAAACTGCAGGATCACCTTTCAGATCAGATCTTACAAAGCGAAGCACATCATTTCGTTGGAATACCAACAGCCCACCTAGTTTTAAATCGTTTAAGAAGAAACTTCAAGAAGCAACATCCGAAATCAGGAACGTAGCGTGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF810

Protein Analysis

1147

Amino Acids

130.01

Weight (kDa)

5.94

Isoelectric Point (pI)

42.44

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TPR_PATROL1 PF25761 690 - 1088 1e-104 PATROL1-like, TPR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 440
Acc36I ACCTGC 1 cut(s) 1632
AccB7I CCANNNNNTGG 1 cut(s) 2296
AccI GTMKAC 1 cut(s) 2159
AccII CGCG 3 cut(s) 119, 811, 2127
AclWI GGATC 7 cut(s) 293, 322, 1989, 2229, 2739, 3303, 3316
AcoI YGGCCR 1 cut(s) 2824
AcsI RAATTY 4 cut(s) 62, 394, 2993, 3233
AcuI CTGAAG 2 cut(s) 234, 1962
AfaI GTAC 7 cut(s) 230, 345, 1779, 2447, 2762, 3195, 3275
AfiI CCNNNNNNNGG 4 cut(s) 273, 1131, 2296, 3423
AflIII ACRYGT 1 cut(s) 346
AhdI GACNNNNNGTC 1 cut(s) 1027
AhlI ACTAGT 1 cut(s) 3031
AjnI CCWGG 2 cut(s) 1096, 2295
Alw21I GWGCWC 5 cut(s) 12, 469, 991, 2640, 2785
Alw26I GTCTC 4 cut(s) 696, 1035, 1115, 2378
Alw44I GTGCAC 1 cut(s) 465
AlwI GGATC 7 cut(s) 293, 322, 1989, 2229, 2739, 3303, 3316
AlwNI CAGNNNCTG 3 cut(s) 1970, 2481, 3067
AoxI GGCC 6 cut(s) 1207, 1270, 1987, 2824, 2927, 3016
ApaLI GTGCAC 1 cut(s) 465
ApoI RAATTY 4 cut(s) 62, 394, 2993, 3233
ArsI GACNNNNNNTTYG 6 cut(s) 635, 667, 674, 706, 872, 904
Asp700I GAANNNNTTC 3 cut(s) 933, 1814, 3018
AspLEI GCGC 2 cut(s) 164, 2129
AspS9I GGNCC 6 cut(s) 85, 357, 1260, 1309, 1698, 2927
AsuC2I CCSGG 2 cut(s) 100, 1832
AvaII GGWCC 5 cut(s) 85, 357, 1260, 1309, 1698
BaeGI GKGCMC 4 cut(s) 469, 817, 1104, 2560
BaeI ACNNNNGTAYC 2 cut(s) 1093, 1126
BalI TGGCCA 1 cut(s) 2826
BanII GRGCYC 1 cut(s) 2640
BauI CACGAG 1 cut(s) 2934
BbsI GAAGAC 6 cut(s) 1483, 1536, 1816, 1909, 2278, 3285
Bbv12I GWGCWC 5 cut(s) 12, 469, 991, 2640, 2785
BbvCI CCTCAGC 1 cut(s) 1047
BceAI ACGGC 2 cut(s) 24, 731
BcgI CGANNNNNNTGC 2 cut(s) 17, 51
BciT130I CCWGG 2 cut(s) 1098, 2297
BclI TGATCA 1 cut(s) 3154
BcnI CCSGG 2 cut(s) 100, 1832
BcoDI GTCTC 4 cut(s) 696, 1035, 1115, 2378
BcuI ACTAGT 1 cut(s) 3031
BfaI CTAG 7 cut(s) 290, 774, 1443, 2330, 2531, 3032, 3375
BfmI CTRYAG 3 cut(s) 26, 2673, 3303
BfoI RGCGCY 1 cut(s) 165
BfuAI ACCTGC 1 cut(s) 1632
BglII AGATCT 1 cut(s) 3325
BlpI GCTNAGC 2 cut(s) 2094, 3057
BmcAI AGTACT 2 cut(s) 230, 1779
Bme1390I CCNGG 4 cut(s) 100, 1098, 1832, 2297
Bme18I GGWCC 5 cut(s) 85, 357, 1260, 1309, 1698
BmeRI GACNNNNNGTC 1 cut(s) 1027
BmgT120I GGNCC 6 cut(s) 85, 357, 1260, 1309, 1698, 2927
BmiI GGNNCC 2 cut(s) 1310, 2151
BmrFI CCNGG 4 cut(s) 100, 1098, 1832, 2297
BpiI GAAGAC 6 cut(s) 1483, 1536, 1816, 1909, 2278, 3285
Bpu10I CCTNAGC 1 cut(s) 1047
Bpu1102I GCTNAGC 2 cut(s) 2094, 3057
BpuEI CTTGAG 2 cut(s) 2159, 2438
BpuMI CCSGG 2 cut(s) 100, 1832
Bsa29I ATCGAT 2 cut(s) 144, 822
BsaBI GATNNNNATC 1 cut(s) 1505
BsaI GGTCTC 1 cut(s) 1115
BsaJI CCNNGG 5 cut(s) 323, 1097, 1770, 2295, 2821
BsaWI WCCGGW 1 cut(s) 354
BsaXI ACNNNNNCTCC 2 cut(s) 2141, 2171
Bsc4I CCNNNNNNNGG 4 cut(s) 273, 1131, 2296, 3423
Bse1I ACTGG 5 cut(s) 1530, 2125, 2396, 2713, 2898
Bse3DI GCAATG 1 cut(s) 1459
Bse8I GATNNNNATC 1 cut(s) 1505
BseBI CCWGG 2 cut(s) 1098, 2297
BseCI ATCGAT 2 cut(s) 144, 822
BseDI CCNNGG 5 cut(s) 323, 1097, 1770, 2295, 2821
BseJI GATNNNNATC 1 cut(s) 1505
BseLI CCNNNNNNNGG 4 cut(s) 273, 1131, 2296, 3423
BseMI GCAATG 1 cut(s) 1459
BseMII CTCAG 8 cut(s) 1038, 1797, 1807, 2009, 2108, 2177, 2749, 3048
BseNI ACTGG 5 cut(s) 1530, 2125, 2396, 2713, 2898
BseRI GAGGAG 3 cut(s) 312, 2156, 2352
BseSI GKGCMC 4 cut(s) 469, 817, 1104, 2560
BsgI GTGCAG 1 cut(s) 707
Bsh1236I CGCG 3 cut(s) 119, 811, 2127
BshFI GGCC 6 cut(s) 1209, 1272, 1989, 2826, 2929, 3018
BshVI ATCGAT 2 cut(s) 144, 822
BsiHKAI GWGCWC 5 cut(s) 12, 469, 991, 2640, 2785
BsiSI CCGG 3 cut(s) 99, 355, 1832
BslFI GGGAC 4 cut(s) 425, 1034, 2603, 2681
BslI CCNNNNNNNGG 4 cut(s) 273, 1131, 2296, 3423
BsmAI GTCTC 4 cut(s) 696, 1035, 1115, 2378
BsmBI CGTCTC 1 cut(s) 2378
BsmFI GGGAC 4 cut(s) 425, 1034, 2603, 2681
BsnI GGCC 6 cut(s) 1209, 1272, 1989, 2826, 2929, 3018
Bso31I GGTCTC 1 cut(s) 1115
Bsp1286I GDGCHC 8 cut(s) 12, 469, 817, 991, 1104, 2560, 2640, 2785
Bsp1407I TGTACA 1 cut(s) 2445
Bsp1720I GCTNAGC 2 cut(s) 2094, 3057
BspANI GGCC 6 cut(s) 1209, 1272, 1989, 2826, 2929, 3018
BspCNI CTCAG 8 cut(s) 1039, 1798, 1806, 2008, 2107, 2176, 2748, 3049
BspDI ATCGAT 2 cut(s) 144, 822
BspFNI CGCG 3 cut(s) 119, 811, 2127
BspLI GGNNCC 2 cut(s) 1310, 2151
BspMAI CTGCAG 3 cut(s) 30, 2677, 3307
BspMI ACCTGC 1 cut(s) 1632
BspPI GGATC 7 cut(s) 293, 322, 1989, 2229, 2739, 3303, 3316
BspTNI GGTCTC 1 cut(s) 1115
BsrDI GCAATG 1 cut(s) 1459
BsrGI TGTACA 1 cut(s) 2445
BsrI ACTGG 5 cut(s) 1530, 2125, 2396, 2713, 2898
BssECI CCNNGG 5 cut(s) 323, 1097, 1770, 2295, 2821
BssSI CACGAG 1 cut(s) 2934
BssT1I CCWWGG 2 cut(s) 1770, 2821
Bst2BI CACGAG 1 cut(s) 2934
Bst2UI CCWGG 2 cut(s) 1098, 2297
Bst4CI ACNGT 4 cut(s) 504, 1323, 1366, 2765
Bst6I CTCTTC 5 cut(s) 480, 656, 1098, 2205, 2859
BstAPI GCANNNNNTGC 1 cut(s) 2681
BstAUI TGTACA 1 cut(s) 2445
BstC8I GCNNGC 7 cut(s) 53, 813, 1211, 1340, 1433, 1722, 2268
BstFNI CGCG 3 cut(s) 119, 811, 2127
BstH2I RGCGCY 1 cut(s) 165
BstHHI GCGC 2 cut(s) 164, 2129
BstMAI GTCTC 4 cut(s) 696, 1035, 1115, 2378
BstMWI GCNNNNNNNGC 7 cut(s) 125, 368, 584, 1458, 2326, 2681, 3053
BstNI CCWGG 2 cut(s) 1098, 2297
BstNSI RCATGY 3 cut(s) 350, 482, 2744
BstSCI CCNGG 4 cut(s) 98, 1096, 1830, 2295
BstSFI CTRYAG 3 cut(s) 26, 2673, 3303
BstSLI GKGCMC 4 cut(s) 469, 817, 1104, 2560
BstUI CGCG 3 cut(s) 119, 811, 2127
BstV2I GAAGAC 6 cut(s) 1483, 1536, 1816, 1909, 2278, 3285
BstX2I RGATCY 2 cut(s) 2731, 3325
BstXI CCANNNNNNTGG 1 cut(s) 2834
BstYI RGATCY 2 cut(s) 2731, 3325
Bsu15I ATCGAT 2 cut(s) 144, 822
BsuRI GGCC 6 cut(s) 1209, 1272, 1989, 2826, 2929, 3018
BsuTUI ATCGAT 2 cut(s) 144, 822
BtgZI GCGATG 2 cut(s) 773, 1632
BtsI GCAGTG 3 cut(s) 905, 1454, 2670
BtsIMutI CAGTG 6 cut(s) 905, 1371, 1454, 2670, 2891, 2960
BveI ACCTGC 1 cut(s) 1632
Cac8I GCNNGC 7 cut(s) 53, 813, 1211, 1340, 1433, 1722, 2268
CaiI CAGNNNCTG 3 cut(s) 1970, 2481, 3067
CfoI GCGC 2 cut(s) 164, 2129
Cfr13I GGNCC 6 cut(s) 85, 357, 1260, 1309, 1698, 2927
ClaI ATCGAT 2 cut(s) 144, 822
CpoI CGGWCCG 1 cut(s) 357
CseI GACGC 6 cut(s) 108, 172, 786, 1493, 1673, 2133
Csp6I GTAC 7 cut(s) 229, 344, 1778, 2446, 2761, 3194, 3274
CspCI CAANNNNNGTGG 2 cut(s) 175, 210
CspI CGGWCCG 1 cut(s) 357
CviQI GTAC 7 cut(s) 229, 344, 1778, 2446, 2761, 3194, 3274
DraI TTTAAA 3 cut(s) 1248, 2502, 3382
DrdI GACNNNNNNGTC 1 cut(s) 440
DriI GACNNNNNGTC 1 cut(s) 1027
DseDI GACNNNNNNGTC 1 cut(s) 440
EaeI YGGCCR 1 cut(s) 2824
Eam1104I CTCTTC 5 cut(s) 480, 656, 1098, 2205, 2859
Eam1105I GACNNNNNGTC 1 cut(s) 1027
EarI CTCTTC 5 cut(s) 480, 656, 1098, 2205, 2859
EciI GGCGGA 2 cut(s) 100, 112
Ecl136II GAGCTC 1 cut(s) 2638
Eco130I CCWWGG 2 cut(s) 1770, 2821
Eco147I AGGCCT 2 cut(s) 1272, 3018
Eco24I GRGCYC 1 cut(s) 2640
Eco31I GGTCTC 1 cut(s) 1115
Eco32I GATATC 2 cut(s) 35, 1803
Eco47I GGWCC 5 cut(s) 85, 357, 1260, 1309, 1698
Eco53kI GAGCTC 1 cut(s) 2638
Eco57I CTGAAG 2 cut(s) 234, 1962
EcoICRI GAGCTC 1 cut(s) 2638
EcoO109I RGGNCCY 2 cut(s) 1309, 2927
EcoRI GAATTC 2 cut(s) 62, 394
EcoRII CCWGG 2 cut(s) 1096, 2295
EcoRV GATATC 2 cut(s) 35, 1803
EcoT14I CCWWGG 2 cut(s) 1770, 2821
EcoT22I ATGCAT 2 cut(s) 373, 2746
EcoT38I GRGCYC 1 cut(s) 2640
ErhI CCWWGG 2 cut(s) 1770, 2821
Esp3I CGTCTC 1 cut(s) 2378
FalI AAGNNNNNCTT 4 cut(s) 215, 247, 1944, 1976
FaqI GGGAC 4 cut(s) 425, 1034, 2603, 2681
FauI CCCGC 4 cut(s) 124, 543, 804, 1713
FauNDI CATATG 1 cut(s) 3165
FbaI TGATCA 1 cut(s) 3154
FblI GTMKAC 1 cut(s) 2159
FriOI GRGCYC 1 cut(s) 2640
FspBI CTAG 7 cut(s) 290, 774, 1443, 2330, 2531, 3032, 3375
GlaI GCGC 2 cut(s) 163, 2128
HaeII RGCGCY 1 cut(s) 165
HaeIII GGCC 6 cut(s) 1209, 1272, 1989, 2826, 2929, 3018
HapII CCGG 3 cut(s) 99, 355, 1832
HgaI GACGC 6 cut(s) 108, 172, 786, 1493, 1673, 2133
HhaI GCGC 2 cut(s) 164, 2129
Hin6I GCGC 2 cut(s) 162, 2127
HinP1I GCGC 2 cut(s) 162, 2127
HincII GTYRAC 3 cut(s) 1483, 2160, 2647
HindII GTYRAC 3 cut(s) 1483, 2160, 2647
HpaII CCGG 3 cut(s) 99, 355, 1832
Hpy99I CGWCG 4 cut(s) 51, 79, 1739, 2392
HpyAV CCTTC 7 cut(s) 663, 1199, 2771, 2891, 2940, 3008, 3029
HpyCH4III ACNGT 4 cut(s) 504, 1323, 1366, 2765
HpyCH4IV ACGT 3 cut(s) 1734, 2104, 3429
HpyF10VI GCNNNNNNNGC 7 cut(s) 125, 368, 584, 1458, 2326, 2681, 3053
HpySE526I ACGT 3 cut(s) 1734, 2104, 3429
HspAI GCGC 2 cut(s) 162, 2127
Ksp22I TGATCA 1 cut(s) 3154
LmnI GCTCC 5 cut(s) 7, 2018, 2149, 2365, 3037
MaeI CTAG 7 cut(s) 290, 774, 1443, 2330, 2531, 3032, 3375
MaeII ACGT 3 cut(s) 1734, 2104, 3429
MaeIII GTNAC 5 cut(s) 651, 1730, 1861, 2375, 2699
MflI RGATCY 2 cut(s) 2731, 3325
MhlI GDGCHC 8 cut(s) 12, 469, 817, 991, 1104, 2560, 2640, 2785
MlsI TGGCCA 1 cut(s) 2826
MluNI TGGCCA 1 cut(s) 2826
MlyI GAGTC 7 cut(s) 101, 563, 2155, 2365, 2472, 2843, 3169
MmeI TCCRAC 3 cut(s) 516, 1342, 3335
Mox20I TGGCCA 1 cut(s) 2826
Mph1103I ATGCAT 2 cut(s) 373, 2746
MroXI GAANNNNTTC 3 cut(s) 933, 1814, 3018
MscI TGGCCA 1 cut(s) 2826
MseI TTAA 8 cut(s) 492, 864, 1247, 1950, 2238, 2501, 3381, 3390
MslI CAYNNNNRTG 3 cut(s) 734, 2811, 2832
Msp20I TGGCCA 1 cut(s) 2826
MspA1I CMGCKG 2 cut(s) 391, 1967
MspI CCGG 3 cut(s) 99, 355, 1832
MspR9I CCNGG 4 cut(s) 100, 1098, 1832, 2297
MvaI CCWGG 2 cut(s) 1098, 2297
MvnI CGCG 3 cut(s) 119, 811, 2127
MwoI GCNNNNNNNGC 7 cut(s) 125, 368, 584, 1458, 2326, 2681, 3053
NciI CCSGG 2 cut(s) 100, 1832
NdeI CATATG 1 cut(s) 3165
NlaIV GGNNCC 2 cut(s) 1310, 2151
NmeAIII GCCGAG 1 cut(s) 304
NmuCI GTSAC 3 cut(s) 651, 1861, 2699
NsiI ATGCAT 2 cut(s) 373, 2746
NspI RCATGY 3 cut(s) 350, 482, 2744
PceI AGGCCT 2 cut(s) 1272, 3018
PciI ACATGT 1 cut(s) 346
PcsI WCGNNNNNNNCGW 1 cut(s) 43
PdmI GAANNNNTTC 3 cut(s) 933, 1814, 3018
PflFI GACNNNGTC 3 cut(s) 182, 1258, 1487
PflMI CCANNNNNTGG 1 cut(s) 2296
PleI GAGTC 7 cut(s) 101, 562, 2155, 2365, 2472, 2843, 3168
PpsI GAGTC 7 cut(s) 101, 562, 2155, 2365, 2472, 2843, 3168
PpuMI RGGWCCY 1 cut(s) 1309
PscI ACATGT 1 cut(s) 346
Psp124BI GAGCTC 1 cut(s) 2640
Psp5II RGGWCCY 1 cut(s) 1309
Psp6I CCWGG 2 cut(s) 1096, 2295
PspGI CCWGG 2 cut(s) 1096, 2295
PspN4I GGNNCC 2 cut(s) 1310, 2151
PspPI GGNCC 6 cut(s) 85, 357, 1260, 1309, 1698, 2927
PspPPI RGGWCCY 1 cut(s) 1309
PstI CTGCAG 3 cut(s) 30, 2677, 3307
PstNI CAGNNNCTG 3 cut(s) 1970, 2481, 3067
PsuI RGATCY 2 cut(s) 2731, 3325
PsyI GACNNNGTC 3 cut(s) 182, 1258, 1487
PvuII CAGCTG 2 cut(s) 391, 1967
RsaI GTAC 7 cut(s) 230, 345, 1779, 2447, 2762, 3195, 3275
RsaNI GTAC 7 cut(s) 229, 344, 1778, 2446, 2761, 3194, 3274
RseI CAYNNNNRTG 3 cut(s) 734, 2811, 2832
Rsr2I CGGWCCG 1 cut(s) 357
RsrII CGGWCCG 1 cut(s) 357
SacI GAGCTC 1 cut(s) 2640
SalI GTCGAC 1 cut(s) 2158
SaqAI TTAA 8 cut(s) 492, 864, 1247, 1950, 2238, 2501, 3381, 3390
Sau96I GGNCC 6 cut(s) 85, 357, 1260, 1309, 1698, 2927
ScaI AGTACT 2 cut(s) 230, 1779
SchI GAGTC 7 cut(s) 101, 563, 2155, 2365, 2472, 2843, 3169
ScrFI CCNGG 4 cut(s) 100, 1098, 1832, 2297
SduI GDGCHC 8 cut(s) 12, 469, 817, 991, 1104, 2560, 2640, 2785
SfcI CTRYAG 3 cut(s) 26, 2673, 3303
SinI GGWCC 5 cut(s) 85, 357, 1260, 1309, 1698
SmiMI CAYNNNNRTG 3 cut(s) 734, 2811, 2832
SmlI CTYRAG 2 cut(s) 2138, 2417
SmoI CTYRAG 2 cut(s) 2138, 2417
SpeI ACTAGT 1 cut(s) 3031
SseBI AGGCCT 2 cut(s) 1272, 3018
SspI AATATT 4 cut(s) 570, 1156, 1651, 1677
SspMI CTAG 7 cut(s) 290, 774, 1443, 2330, 2531, 3032, 3375
SstI GAGCTC 1 cut(s) 2640
StuI AGGCCT 2 cut(s) 1272, 3018
StyD4I CCNGG 4 cut(s) 98, 1096, 1830, 2295
StyI CCWWGG 2 cut(s) 1770, 2821
TaaI ACNGT 4 cut(s) 504, 1323, 1366, 2765
TaiI ACGT 3 cut(s) 1737, 2107, 3432
TatI WGTACW 4 cut(s) 228, 1777, 2445, 2760
TauI GCSGC 1 cut(s) 128
Tru1I TTAA 8 cut(s) 492, 864, 1247, 1950, 2238, 2501, 3381, 3390
Tru9I TTAA 8 cut(s) 492, 864, 1247, 1950, 2238, 2501, 3381, 3390
TscAI CASTG 6 cut(s) 905, 1371, 1454, 2677, 2898, 2967
TseFI GTSAC 3 cut(s) 651, 1861, 2699
Tsp45I GTSAC 3 cut(s) 651, 1861, 2699
TspGWI ACGGA 2 cut(s) 722, 3308
TspRI CASTG 6 cut(s) 905, 1371, 1454, 2677, 2898, 2967
Tth111I GACNNNGTC 3 cut(s) 182, 1258, 1487
Van91I CCANNNNNTGG 1 cut(s) 2296
VneI GTGCAC 1 cut(s) 465
VpaK11BI GGWCC 5 cut(s) 85, 357, 1260, 1309, 1698
XapI RAATTY 4 cut(s) 62, 394, 2993, 3233
XceI RCATGY 3 cut(s) 350, 482, 2744
XcmI CCANNNNNNNNNTGG 1 cut(s) 2048
XmiI GTMKAC 1 cut(s) 2159
XmnI GAANNNNTTC 3 cut(s) 933, 1814, 3018
XspI CTAG 7 cut(s) 290, 774, 1443, 2330, 2531, 3032, 3375
ZrmI AGTACT 2 cut(s) 230, 1779
Zsp2I ATGCAT 2 cut(s) 373, 2746
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.